ITK  4.2.0
Insight Segmentation and Registration Toolkit
Public Types | Public Member Functions | Static Public Member Functions | Protected Member Functions | Protected Attributes
itk::DeformableSimplexMesh3DBalloonForceFilter< TInputMesh, TOutputMesh > Class Template Reference

#include <itkDeformableSimplexMesh3DBalloonForceFilter.h>

+ Inheritance diagram for itk::DeformableSimplexMesh3DBalloonForceFilter< TInputMesh, TOutputMesh >:
+ Collaboration diagram for itk::DeformableSimplexMesh3DBalloonForceFilter< TInputMesh, TOutputMesh >:

List of all members.

Public Types

typedef SmartPointer< const SelfConstPointer
typedef
Superclass::GradientIndexType 
GradientIndexType
typedef
Superclass::GradientIndexValueType 
GradientIndexValueType
typedef
GradientIntensityImageType::Pointer 
GradientIntensityImagePointer
typedef Image< PixelType, 3 > GradientIntensityImageType
typedef InputMeshType::Pointer InputMeshPointer
typedef TInputMesh InputMeshType
typedef OutputMeshType::Pointer OutputMeshPointer
typedef TOutputMesh OutputMeshType
typedef InputMeshType::PixelType PixelType
typedef SmartPointer< SelfPointer
typedef Superclass::PointType PointType
typedef
DeformableSimplexMesh3DBalloonForceFilter 
Self
typedef
DeformableSimplexMesh3DFilter
< TInputMesh, TOutputMesh > 
Superclass
- Public Types inherited from itk::DeformableSimplexMesh3DFilter< TInputMesh, TOutputMesh >
typedef Image< unsigned char, 3 > BinaryOutput
typedef
InputMeshType::CellsContainer::Iterator 
CellsContainerIterator
typedef
InputMeshType::CellsContainerPointer 
CellsContainerPointer
typedef CovariantVector
< typename
VectorType::ValueType, 3 > 
CovariantVectorType
typedef GeometryMapType::Iterator GeometryMapIterator
typedef GeometryMapType::Pointer GeometryMapPointer
typedef
InputMeshType::GeometryMapType 
GeometryMapType
typedef GradientImageType::Pointer GradientImagePointer
typedef GradientImageType::SizeType GradientImageSizeType
typedef Image< GradientType, 3 > GradientImageType
typedef
GradientImageType::PixelType 
GradientPixelType
typedef CovariantVector
< PixelType, 3 > 
GradientType
typedef IndexSetType::iterator IndexSetIterator
typedef std::set< IdentifierTypeIndexSetType
typedef
InputMeshType::NeighborListType 
InputNeighbors
typedef
InputMeshType::NeighborListType::iterator 
InputNeighborsIterator
typedef
InputMeshType::PointsContainer 
InputPointsContainer
typedef
InputMeshType::PointsContainer::ConstIterator 
InputPointsContainerConstIterator
typedef
InputMeshType::PointsContainerPointer 
InputPointsContainerPointer
typedef Image< float, 3 > MagnitudeOutput
typedef InputMeshType::PointType MeshPointType
typedef NeighborSetType::iterator NeighborSetIterator
typedef std::set< IdentifierTypeNeighborSetType
typedef PointType::VectorType VectorType
typedef itk::MapContainer
< IdentifierType,
NeighborSetType
VertexNeighborListType
- Public Types inherited from itk::MeshToMeshFilter< TInputMesh, TOutputMesh >
- Public Types inherited from itk::MeshSource< TOutputMesh >
typedef
Superclass::DataObjectIdentifierType 
DataObjectIdentifierType
typedef DataObject::Pointer DataObjectPointer
typedef
ProcessObject::DataObjectPointerArraySizeType 
DataObjectPointerArraySizeType
- Public Types inherited from itk::ProcessObject
typedef std::vector
< DataObjectPointer
DataObjectPointerArray
typedef std::vector
< DataObjectIdentifierType
NameArray
- Public Types inherited from itk::Object
- Public Types inherited from itk::LightObject

Public Member Functions

virtual ::itk::LightObject::Pointer CreateAnother (void) const
virtual double GetKappa () const
virtual const char * GetNameOfClass () const
virtual void SetKappa (double _arg)
- Public Member Functions inherited from itk::DeformableSimplexMesh3DFilter< TInputMesh, TOutputMesh >
virtual double GetAlpha () const
virtual double GetBeta () const
virtual double GetDamping () const
virtual const GeometryMapTypeGetData ()
virtual double GetGamma () const
const GradientImageTypeGetGradient () const
virtual unsigned int GetRigidity () const
virtual void SetAlpha (double _arg)
virtual void SetBeta (double _arg)
virtual void SetDamping (double _arg)
virtual void SetData (GeometryMapType *_arg)
virtual void SetGamma (double _arg)
void SetGradient (const GradientImageType *gradientImage)
virtual void SetRigidity (unsigned int _arg)
virtual void SetIterations (int _arg)
virtual int GetIterations () const
virtual int GetImageWidth () const
virtual int GetImageHeight () const
virtual int GetImageDepth () const
virtual int GetStep () const
- Public Member Functions inherited from itk::MeshToMeshFilter< TInputMesh, TOutputMesh >
const InputMeshTypeGetInput (void) const
const InputMeshTypeGetInput (unsigned int idx) const
void SetInput (const InputMeshType *input)
- Public Member Functions inherited from itk::MeshSource< TOutputMesh >
OutputMeshTypeGetOutput (void)
OutputMeshTypeGetOutput (unsigned int idx)
virtual void GraftNthOutput (unsigned int idx, DataObject *output)
virtual void GraftOutput (const DataObjectIdentifierType &key, DataObject *output)
void SetOutput (TOutputMesh *output)
virtual void GraftOutput (DataObject *output)
virtual DataObjectPointer MakeOutput (DataObjectPointerArraySizeType idx)
- Public Member Functions inherited from itk::ProcessObject
virtual void AbortGenerateDataOff ()
virtual void AbortGenerateDataOn ()
virtual void EnlargeOutputRequestedRegion (DataObject *)
virtual const bool & GetAbortGenerateData ()
NameArray GetInputNames () const
MultiThreader * GetMultiThreader () const
DataObjectPointerArraySizeType GetNumberOfIndexedInputs () const
DataObjectPointerArraySizeType GetNumberOfInputs () const
DataObjectPointerArraySizeType GetNumberOfOutputs () const
virtual
DataObjectPointerArraySizeType 
GetNumberOfValidRequiredInputs () const
NameArray GetOutputNames () const
virtual const float & GetProgress ()
NameArray GetRequiredInputNames () const
bool HasInput (const DataObjectIdentifierType &key) const
bool HasOutput (const DataObjectIdentifierType &key) const
virtual DataObjectPointer MakeOutput (const DataObjectIdentifierType &)
virtual void PrepareOutputs ()
virtual void PropagateRequestedRegion (DataObject *output)
virtual void ResetPipeline ()
virtual void SetAbortGenerateData (bool _arg)
virtual void SetProgress (float _arg)
virtual void Update ()
virtual void UpdateLargestPossibleRegion ()
virtual void UpdateOutputData (DataObject *output)
virtual void UpdateOutputInformation ()
void UpdateProgress (float amount)
DataObjectPointerArray GetInputs ()
DataObjectPointerArray GetOutputs ()
DataObjectPointerArray GetIndexedInputs ()
DataObjectPointerArray GetIndexedOutputs ()
DataObjectPointerArraySizeType GetNumberOfIndexedOutputs () const
virtual void SetReleaseDataFlag (bool flag)
virtual bool GetReleaseDataFlag () const
void ReleaseDataFlagOn ()
void ReleaseDataFlagOff ()
virtual void SetReleaseDataBeforeUpdateFlag (bool _arg)
virtual const bool & GetReleaseDataBeforeUpdateFlag ()
virtual void ReleaseDataBeforeUpdateFlagOn ()
virtual void ReleaseDataBeforeUpdateFlagOff ()
virtual void SetNumberOfThreads (ThreadIdType _arg)
virtual const ThreadIdTypeGetNumberOfThreads ()
- Public Member Functions inherited from itk::Object
unsigned long AddObserver (const EventObject &event, Command *)
unsigned long AddObserver (const EventObject &event, Command *) const
virtual void DebugOff () const
virtual void DebugOn () const
CommandGetCommand (unsigned long tag)
bool GetDebug () const
MetaDataDictionaryGetMetaDataDictionary (void)
const MetaDataDictionaryGetMetaDataDictionary (void) const
virtual unsigned long GetMTime () const
virtual const TimeStampGetTimeStamp () const
bool HasObserver (const EventObject &event) const
void InvokeEvent (const EventObject &)
void InvokeEvent (const EventObject &) const
virtual void Modified () const
virtual void Register () const
void RemoveAllObservers ()
void RemoveObserver (unsigned long tag)
void SetDebug (bool debugFlag) const
void SetMetaDataDictionary (const MetaDataDictionary &rhs)
virtual void SetReferenceCount (int)
virtual void UnRegister () const
- Public Member Functions inherited from itk::LightObject
virtual void Delete ()
virtual int GetReferenceCount () const
 itkCloneMacro (Self)
void Print (std::ostream &os, Indent indent=0) const

Static Public Member Functions

static Pointer New ()

Protected Member Functions

virtual void ComputeExternalForce (SimplexMeshGeometry *data)
 DeformableSimplexMesh3DBalloonForceFilter ()
 DeformableSimplexMesh3DBalloonForceFilter (const Self &)
void operator= (const Self &)
void PrintSelf (std::ostream &os, Indent indent) const
 ~DeformableSimplexMesh3DBalloonForceFilter ()
- Protected Member Functions inherited from itk::DeformableSimplexMesh3DFilter< TInputMesh, TOutputMesh >
PointType ComputeBarycentricCoordinates (PointType p, SimplexMeshGeometry *data)
virtual void ComputeDisplacement ()
virtual void ComputeGeometry ()
virtual void ComputeInternalForce (SimplexMeshGeometry *data)
virtual void ComputeOutput ()
virtual void GenerateData ()
virtual void Initialize ()
double L_Func (double r, double d, double phi)
virtual void UpdateReferenceMetrics ()
 DeformableSimplexMesh3DFilter ()
 ~DeformableSimplexMesh3DFilter ()
 DeformableSimplexMesh3DFilter (const Self &)
- Protected Member Functions inherited from itk::MeshToMeshFilter< TInputMesh, TOutputMesh >
void CopyInputMeshToOutputMeshCellData ()
void CopyInputMeshToOutputMeshCellLinks ()
void CopyInputMeshToOutputMeshCells ()
void CopyInputMeshToOutputMeshPointData ()
void CopyInputMeshToOutputMeshPoints ()
 MeshToMeshFilter ()
 ~MeshToMeshFilter ()
- Protected Member Functions inherited from itk::MeshSource< TOutputMesh >
void GenerateInputRequestedRegion ()
 MeshSource ()
virtual ~MeshSource ()
- Protected Member Functions inherited from itk::ProcessObject
virtual void AddInput (DataObject *input)
virtual void AddOutput (DataObject *output)
bool AddRequiredInputName (const DataObjectIdentifierType &)
virtual void CacheInputReleaseDataFlags ()
virtual void GenerateOutputInformation ()
virtual void GenerateOutputRequestedRegion (DataObject *output)
virtual const
DataObjectPointerArraySizeType
GetNumberOfRequiredInputs ()
virtual const
DataObjectPointerArraySizeType
GetNumberOfRequiredOutputs ()
bool IsIndexedName (const DataObjectIdentifierType &) const
bool IsRequiredInputName (const DataObjectIdentifierType &) const
 itkLegacyMacro (virtual void RemoveInput(DataObject *input))
 itkLegacyMacro (virtual void RemoveOutput(DataObject *output))
 itkLegacyMacro (void SetNumberOfInputs(DataObjectPointerArraySizeType num))
 itkLegacyMacro (void SetNumberOfOutputs(DataObjectPointerArraySizeType num))
DataObjectPointerArraySizeType MakeIndexFromName (const DataObjectIdentifierType &) const
DataObjectIdentifierType MakeNameFromIndex (DataObjectPointerArraySizeType) const
 ProcessObject ()
virtual void PropagateResetPipeline ()
virtual void ReleaseInputs ()
virtual void RemoveInput (const DataObjectIdentifierType &key)
virtual void RemoveInput (DataObjectPointerArraySizeType)
virtual void RemoveOutput (const DataObjectIdentifierType &key)
virtual void RemoveOutput (DataObjectPointerArraySizeType idx)
bool RemoveRequiredInputName (const DataObjectIdentifierType &)
virtual void RestoreInputReleaseDataFlags ()
virtual void SetInput (const DataObjectIdentifierType &key, DataObject *input)
virtual void SetNthInput (DataObjectPointerArraySizeType num, DataObject *input)
virtual void SetNthOutput (DataObjectPointerArraySizeType num, DataObject *output)
void SetNumberOfIndexedInputs (DataObjectPointerArraySizeType num)
void SetNumberOfIndexedOutputs (DataObjectPointerArraySizeType num)
virtual void SetNumberOfRequiredInputs (DataObjectPointerArraySizeType)
virtual void SetNumberOfRequiredOutputs (DataObjectPointerArraySizeType _arg)
virtual void SetOutput (const DataObjectIdentifierType &key, DataObject *output)
virtual void SetPrimaryInput (DataObject *input)
virtual void SetPrimaryOutput (DataObject *output)
void SetRequiredInputNames (const NameArray &)
virtual void VerifyInputInformation ()
virtual void VerifyPreconditions ()
 ~ProcessObject ()
DataObjectGetInput (const DataObjectIdentifierType &key)
const DataObjectGetInput (const DataObjectIdentifierType &key) const
DataObjectGetInput (DataObjectPointerArraySizeType)
const DataObjectGetInput (DataObjectPointerArraySizeType idx) const
DataObjectGetPrimaryInput ()
const DataObjectGetPrimaryInput () const
DataObjectGetOutput (const DataObjectIdentifierType &key)
const DataObjectGetOutput (const DataObjectIdentifierType &key) const
DataObjectGetOutput (DataObjectPointerArraySizeType idx)
const DataObjectGetOutput (DataObjectPointerArraySizeType idx) const
DataObjectGetPrimaryOutput ()
const DataObjectGetPrimaryOutput () const
virtual void PushBackInput (const DataObject *input)
virtual void PopBackInput ()
virtual void PushFrontInput (const DataObject *input)
virtual void PopFrontInput ()
- Protected Member Functions inherited from itk::Object
 Object ()
bool PrintObservers (std::ostream &os, Indent indent) const
virtual void SetTimeStamp (const TimeStamp &time)
virtual ~Object ()
- Protected Member Functions inherited from itk::LightObject
virtual LightObject::Pointer InternalClone () const
 LightObject ()
virtual void PrintHeader (std::ostream &os, Indent indent) const
virtual void PrintTrailer (std::ostream &os, Indent indent) const
virtual ~LightObject ()

Protected Attributes

double m_Kappa
- Protected Attributes inherited from itk::DeformableSimplexMesh3DFilter< TInputMesh, TOutputMesh >
double m_Alpha
double m_Beta
double m_Damping
GeometryMapPointer m_Data
double m_Gamma
int m_ImageDepth
int m_ImageHeight
int m_ImageWidth
int m_Iterations
unsigned int m_Rigidity
int m_Step

Detailed Description

template<class TInputMesh, class TOutputMesh>
class itk::DeformableSimplexMesh3DBalloonForceFilter< TInputMesh, TOutputMesh >

Additional to its superclass this model adds an balloon force component to the internal forces.

The balloon force can be scaled, by setting the parameter kappa.

Author:
Thomas Boettger. Division Medical and Biological Informatics, German Cancer Research Center, Heidelberg.

Definition at line 52 of file itkDeformableSimplexMesh3DBalloonForceFilter.h.


Member Typedef Documentation

template<class TInputMesh , class TOutputMesh >
typedef SmartPointer< const Self > itk::DeformableSimplexMesh3DBalloonForceFilter< TInputMesh, TOutputMesh >::ConstPointer
template<class TInputMesh , class TOutputMesh >
typedef Superclass::GradientIndexType itk::DeformableSimplexMesh3DBalloonForceFilter< TInputMesh, TOutputMesh >::GradientIndexType
template<class TInputMesh , class TOutputMesh >
typedef Superclass::GradientIndexValueType itk::DeformableSimplexMesh3DBalloonForceFilter< TInputMesh, TOutputMesh >::GradientIndexValueType
template<class TInputMesh , class TOutputMesh >
typedef GradientIntensityImageType::Pointer itk::DeformableSimplexMesh3DBalloonForceFilter< TInputMesh, TOutputMesh >::GradientIntensityImagePointer
template<class TInputMesh , class TOutputMesh >
typedef Image< PixelType, 3 > itk::DeformableSimplexMesh3DBalloonForceFilter< TInputMesh, TOutputMesh >::GradientIntensityImageType
template<class TInputMesh , class TOutputMesh >
typedef InputMeshType::Pointer itk::DeformableSimplexMesh3DBalloonForceFilter< TInputMesh, TOutputMesh >::InputMeshPointer
template<class TInputMesh , class TOutputMesh >
typedef TInputMesh itk::DeformableSimplexMesh3DBalloonForceFilter< TInputMesh, TOutputMesh >::InputMeshType
template<class TInputMesh , class TOutputMesh >
typedef OutputMeshType::Pointer itk::DeformableSimplexMesh3DBalloonForceFilter< TInputMesh, TOutputMesh >::OutputMeshPointer
template<class TInputMesh , class TOutputMesh >
typedef TOutputMesh itk::DeformableSimplexMesh3DBalloonForceFilter< TInputMesh, TOutputMesh >::OutputMeshType
template<class TInputMesh , class TOutputMesh >
typedef InputMeshType::PixelType itk::DeformableSimplexMesh3DBalloonForceFilter< TInputMesh, TOutputMesh >::PixelType
template<class TInputMesh , class TOutputMesh >
typedef SmartPointer< Self > itk::DeformableSimplexMesh3DBalloonForceFilter< TInputMesh, TOutputMesh >::Pointer

Smart pointer typedef support

Reimplemented from itk::DeformableSimplexMesh3DFilter< TInputMesh, TOutputMesh >.

Definition at line 63 of file itkDeformableSimplexMesh3DBalloonForceFilter.h.

template<class TInputMesh , class TOutputMesh >
typedef Superclass::PointType itk::DeformableSimplexMesh3DBalloonForceFilter< TInputMesh, TOutputMesh >::PointType
template<class TInputMesh , class TOutputMesh >
typedef DeformableSimplexMesh3DBalloonForceFilter itk::DeformableSimplexMesh3DBalloonForceFilter< TInputMesh, TOutputMesh >::Self

Standard "Self" typedef.

Reimplemented from itk::DeformableSimplexMesh3DFilter< TInputMesh, TOutputMesh >.

Definition at line 57 of file itkDeformableSimplexMesh3DBalloonForceFilter.h.

template<class TInputMesh , class TOutputMesh >
typedef DeformableSimplexMesh3DFilter< TInputMesh, TOutputMesh > itk::DeformableSimplexMesh3DBalloonForceFilter< TInputMesh, TOutputMesh >::Superclass

Standard "Superclass" typedef.

Reimplemented from itk::DeformableSimplexMesh3DFilter< TInputMesh, TOutputMesh >.

Definition at line 60 of file itkDeformableSimplexMesh3DBalloonForceFilter.h.


Constructor & Destructor Documentation

template<class TInputMesh , class TOutputMesh >
itk::DeformableSimplexMesh3DBalloonForceFilter< TInputMesh, TOutputMesh >::DeformableSimplexMesh3DBalloonForceFilter ( )
protected
template<class TInputMesh , class TOutputMesh >
itk::DeformableSimplexMesh3DBalloonForceFilter< TInputMesh, TOutputMesh >::~DeformableSimplexMesh3DBalloonForceFilter ( )
protected
template<class TInputMesh , class TOutputMesh >
itk::DeformableSimplexMesh3DBalloonForceFilter< TInputMesh, TOutputMesh >::DeformableSimplexMesh3DBalloonForceFilter ( const Self )
inlineprotected

Member Function Documentation

template<class TInputMesh , class TOutputMesh >
virtual void itk::DeformableSimplexMesh3DBalloonForceFilter< TInputMesh, TOutputMesh >::ComputeExternalForce ( SimplexMeshGeometry data)
protectedvirtual

Compute the external force component

Reimplemented from itk::DeformableSimplexMesh3DFilter< TInputMesh, TOutputMesh >.

template<class TInputMesh , class TOutputMesh >
virtual::itk::LightObject::Pointer itk::DeformableSimplexMesh3DBalloonForceFilter< TInputMesh, TOutputMesh >::CreateAnother ( void  ) const
virtual

Create an object from an instance, potentially deferring to a factory. This method allows you to create an instance of an object that is exactly the same type as the referring object. This is useful in cases where an object has been cast back to a base class.

Reimplemented from itk::DeformableSimplexMesh3DFilter< TInputMesh, TOutputMesh >.

template<class TInputMesh , class TOutputMesh >
virtual double itk::DeformableSimplexMesh3DBalloonForceFilter< TInputMesh, TOutputMesh >::GetKappa ( ) const
virtual
template<class TInputMesh , class TOutputMesh >
virtual const char* itk::DeformableSimplexMesh3DBalloonForceFilter< TInputMesh, TOutputMesh >::GetNameOfClass ( ) const
virtual

Run-time type information (and related methods).

Reimplemented from itk::DeformableSimplexMesh3DFilter< TInputMesh, TOutputMesh >.

template<class TInputMesh , class TOutputMesh >
static Pointer itk::DeformableSimplexMesh3DBalloonForceFilter< TInputMesh, TOutputMesh >::New ( )
static

Method of creation through the object factory.

Reimplemented from itk::DeformableSimplexMesh3DFilter< TInputMesh, TOutputMesh >.

template<class TInputMesh , class TOutputMesh >
void itk::DeformableSimplexMesh3DBalloonForceFilter< TInputMesh, TOutputMesh >::operator= ( const Self )
inlineprotected

current iteration number

Reimplemented from itk::DeformableSimplexMesh3DFilter< TInputMesh, TOutputMesh >.

Definition at line 96 of file itkDeformableSimplexMesh3DBalloonForceFilter.h.

template<class TInputMesh , class TOutputMesh >
void itk::DeformableSimplexMesh3DBalloonForceFilter< TInputMesh, TOutputMesh >::PrintSelf ( std::ostream &  os,
Indent  indent 
) const
protectedvirtual

Methods invoked by Print() to print information about the object including superclasses. Typically not called by the user (use Print() instead) but used in the hierarchical print process to combine the output of several classes.

Reimplemented from itk::DeformableSimplexMesh3DFilter< TInputMesh, TOutputMesh >.

template<class TInputMesh , class TOutputMesh >
virtual void itk::DeformableSimplexMesh3DBalloonForceFilter< TInputMesh, TOutputMesh >::SetKappa ( double  _arg)
virtual

Member Data Documentation

template<class TInputMesh , class TOutputMesh >
double itk::DeformableSimplexMesh3DBalloonForceFilter< TInputMesh, TOutputMesh >::m_Kappa
protected

Parameters definitions. scalar for balloon force

Definition at line 111 of file itkDeformableSimplexMesh3DBalloonForceFilter.h.


The documentation for this class was generated from the following file: