ITK  4.2.0
Insight Segmentation and Registration Toolkit
Classes | Public Types | Public Member Functions | Static Public Attributes | Protected Types | Protected Member Functions | Private Member Functions | Static Private Member Functions | Private Attributes
itk::DenseFiniteDifferenceImageFilter< TInputImage, TOutputImage > Class Template Reference
Image Filters | Module ITKFiniteDifference

#include <itkDenseFiniteDifferenceImageFilter.h>

+ Inheritance diagram for itk::DenseFiniteDifferenceImageFilter< TInputImage, TOutputImage >:
+ Collaboration diagram for itk::DenseFiniteDifferenceImageFilter< TInputImage, TOutputImage >:

List of all members.

Classes

struct  DenseFDThreadStruct

Public Types

typedef SmartPointer< const Self > ConstPointer
typedef
Superclass::FiniteDifferenceFunctionType 		FiniteDifferenceFunctionType
typedef Superclass::InputImageType InputImageType
typedef Superclass::OutputImageType OutputImageType
typedef Superclass::PixelType PixelType
typedef SmartPointer< Self > Pointer
typedef
DenseFiniteDifferenceImageFilter 		Self
typedef
FiniteDifferenceImageFilter
< TInputImage, TOutputImage > 		Superclass
typedef Superclass::TimeStepType TimeStepType
typedef OutputImageType UpdateBufferType
- Public Types inherited from itk::FiniteDifferenceImageFilter< TInputImage, TOutputImage >
typedef TInputImage::PixelType InputPixelType
typedef NumericTraits
< InputPixelType >::ValueType 		InputPixelValueType
typedef
FiniteDifferenceFunctionType::NeighborhoodScalesType 		NeighborhoodScalesType
typedef TOutputImage::PixelType OutputPixelType
typedef NumericTraits
< OutputPixelType >::ValueType 		OutputPixelValueType
typedef
FiniteDifferenceFunctionType::RadiusType 		RadiusType
- Public Types inherited from itk::InPlaceImageFilter< TInputImage, TOutputImage >
typedef
InputImageType::ConstPointer 		InputImageConstPointer
typedef InputImageType::PixelType InputImagePixelType
typedef InputImageType::Pointer InputImagePointer
typedef InputImageType::RegionType InputImageRegionType
typedef
Superclass::OutputImagePixelType 		OutputImagePixelType
typedef
Superclass::OutputImagePointer 		OutputImagePointer
typedef
Superclass::OutputImageRegionType 		OutputImageRegionType
- Public Types inherited from itk::ImageToImageFilter< TInputImage, TOutputImage >
- Public Types inherited from itk::ImageSource< TOutputImage >
typedef
Superclass::DataObjectIdentifierType 		DataObjectIdentifierType
typedef DataObject::Pointer DataObjectPointer
typedef
Superclass::DataObjectPointerArraySizeType 		DataObjectPointerArraySizeType
- Public Types inherited from itk::ProcessObject
typedef std::vector
< DataObjectPointer > 		DataObjectPointerArray
typedef std::vector
< DataObjectIdentifierType > 		NameArray
- Public Types inherited from itk::Object
- Public Types inherited from itk::LightObject

Public Member Functions

virtual const char * GetNameOfClass () const
 typedef (Concept::MultiplyOperator< PixelType, double >) OutputTimesDoubleCheck
 typedef (Concept::AdditiveOperators< PixelType >) OutputAdditiveOperatorsCheck
 typedef (Concept::AdditiveAndAssignOperators< PixelType >) OutputAdditiveAndAssignOperatorsCheck
 typedef (Concept::Convertible< typename TInputImage::PixelType, PixelType >) InputConvertibleToOutputCheck
- Public Member Functions inherited from itk::FiniteDifferenceImageFilter< TInputImage, TOutputImage >
virtual const
FiniteDifferenceFunctionType::Pointer & 		GetDifferenceFunction () const
virtual const IdentifierType & GetElapsedIterations ()
virtual bool GetIsInitialized ()
virtual void SetDifferenceFunction (FiniteDifferenceFunctionType *_arg)
virtual void SetIsInitialized (bool _arg)
void SetStateToInitialized ()
void SetStateToUninitialized ()
virtual void SetNumberOfIterations (IdentifierType _arg)
virtual const IdentifierType & GetNumberOfIterations ()
virtual void SetUseImageSpacing (bool _arg)
virtual void UseImageSpacingOn ()
virtual void UseImageSpacingOff ()
virtual const bool & GetUseImageSpacing ()
virtual void SetMaximumRMSError (double _arg)
virtual const double & GetMaximumRMSError ()
virtual void SetRMSChange (double _arg)
virtual const double & GetRMSChange ()
virtual void SetManualReinitialization (bool _arg)
virtual const bool & GetManualReinitialization ()
virtual void ManualReinitializationOn ()
virtual void ManualReinitializationOff ()
- Public Member Functions inherited from itk::InPlaceImageFilter< TInputImage, TOutputImage >
virtual bool CanRunInPlace () const
virtual void SetInPlace (bool _arg)
virtual bool GetInPlace () const
virtual void InPlaceOn ()
virtual void InPlaceOff ()
- Public Member Functions inherited from itk::ImageToImageFilter< TInputImage, TOutputImage >
const InputImageType * GetInput (void) const
const InputImageType * GetInput (unsigned int idx) const
virtual void PopBackInput ()
virtual void PopFrontInput ()
virtual void PushBackInput (const InputImageType *image)
virtual void PushFrontInput (const InputImageType *image)
virtual void SetInput (const InputImageType *image)
virtual void SetInput (unsigned int, const TInputImage *image)
- Public Member Functions inherited from itk::ImageSource< TOutputImage >
OutputImageType * GetOutput (unsigned int idx)
virtual void GraftNthOutput (unsigned int idx, DataObject *output)
virtual void GraftOutput (DataObject *output)
virtual void GraftOutput (const DataObjectIdentifierType &key, DataObject *output)
OutputImageType * GetOutput (void)
const OutputImageType * GetOutput (void) const
virtual
ProcessObject::DataObjectPointer 		MakeOutput (ProcessObject::DataObjectPointerArraySizeType idx)
- Public Member Functions inherited from itk::ProcessObject
virtual void AbortGenerateDataOff ()
virtual void AbortGenerateDataOn ()
virtual void EnlargeOutputRequestedRegion (DataObject *)
virtual const bool & GetAbortGenerateData ()
NameArray GetInputNames () const
MultiThreader * GetMultiThreader () const
DataObjectPointerArraySizeType GetNumberOfIndexedInputs () const
DataObjectPointerArraySizeType GetNumberOfInputs () const
DataObjectPointerArraySizeType GetNumberOfOutputs () const
virtual
DataObjectPointerArraySizeType 		GetNumberOfValidRequiredInputs () const
NameArray GetOutputNames () const
virtual const float & GetProgress ()
NameArray GetRequiredInputNames () const
bool HasInput (const DataObjectIdentifierType &key) const
bool HasOutput (const DataObjectIdentifierType &key) const
virtual DataObjectPointer MakeOutput (const DataObjectIdentifierType &)
virtual void PrepareOutputs ()
virtual void PropagateRequestedRegion (DataObject *output)
virtual void ResetPipeline ()
virtual void SetAbortGenerateData (bool _arg)
virtual void SetProgress (float _arg)
virtual void Update ()
virtual void UpdateLargestPossibleRegion ()
virtual void UpdateOutputData (DataObject *output)
virtual void UpdateOutputInformation ()
void UpdateProgress (float amount)
DataObjectPointerArray GetInputs ()
DataObjectPointerArray GetOutputs ()
DataObjectPointerArray GetIndexedInputs ()
DataObjectPointerArray GetIndexedOutputs ()
DataObjectPointerArraySizeType GetNumberOfIndexedOutputs () const
virtual void SetReleaseDataFlag (bool flag)
virtual bool GetReleaseDataFlag () const
void ReleaseDataFlagOn ()
void ReleaseDataFlagOff ()
virtual void SetReleaseDataBeforeUpdateFlag (bool _arg)
virtual const bool & GetReleaseDataBeforeUpdateFlag ()
virtual void ReleaseDataBeforeUpdateFlagOn ()
virtual void ReleaseDataBeforeUpdateFlagOff ()
virtual void SetNumberOfThreads (ThreadIdType _arg)
virtual const ThreadIdType & GetNumberOfThreads ()
- Public Member Functions inherited from itk::Object
unsigned long AddObserver (const EventObject &event, Command *)
unsigned long AddObserver (const EventObject &event, Command *) const
virtual LightObject::Pointer CreateAnother () const
virtual void DebugOff () const
virtual void DebugOn () const
Command * GetCommand (unsigned long tag)
bool GetDebug () const
MetaDataDictionary & GetMetaDataDictionary (void)
const MetaDataDictionary & GetMetaDataDictionary (void) const
virtual unsigned long GetMTime () const
virtual const TimeStamp & GetTimeStamp () const
bool HasObserver (const EventObject &event) const
void InvokeEvent (const EventObject &)
void InvokeEvent (const EventObject &) const
virtual void Modified () const
virtual void Register () const
void RemoveAllObservers ()
void RemoveObserver (unsigned long tag)
void SetDebug (bool debugFlag) const
void SetMetaDataDictionary (const MetaDataDictionary &rhs)
virtual void SetReferenceCount (int)
virtual void UnRegister () const
- Public Member Functions inherited from itk::LightObject
virtual void Delete ()
virtual int GetReferenceCount () const
 itkCloneMacro (Self)
void Print (std::ostream &os, Indent indent=0) const

Static Public Attributes

static const unsigned int ImageDimension = Superclass::ImageDimension
- Static Public Attributes inherited from itk::FiniteDifferenceImageFilter< TInputImage, TOutputImage >
- Static Public Attributes inherited from itk::InPlaceImageFilter< TInputImage, TOutputImage >
static const unsigned int InputImageDimension = TInputImage::ImageDimension
static const unsigned int OutputImageDimension = TOutputImage::ImageDimension
- Static Public Attributes inherited from itk::ImageToImageFilter< TInputImage, TOutputImage >
- Static Public Attributes inherited from itk::ImageSource< TOutputImage >

Protected Types

typedef
UpdateBufferType::RegionType 		ThreadRegionType

Protected Member Functions

virtual void AllocateUpdateBuffer ()
virtual void ApplyUpdate (const TimeStepType &dt)
virtual TimeStepType CalculateChange ()
virtual void CopyInputToOutput ()
virtual UpdateBufferType * GetUpdateBuffer ()
virtual void ThreadedApplyUpdate (const TimeStepType &dt, const ThreadRegionType &regionToProcess, ThreadIdType threadId)
virtual TimeStepType ThreadedCalculateChange (const ThreadRegionType &regionToProcess, ThreadIdType threadId)
 DenseFiniteDifferenceImageFilter ()
 ~DenseFiniteDifferenceImageFilter ()
void PrintSelf (std::ostream &os, Indent indent) const
- Protected Member Functions inherited from itk::FiniteDifferenceImageFilter< TInputImage, TOutputImage >
virtual void ApplyUpdate (const TimeStepType &dt)=0
 FiniteDifferenceImageFilter ()
virtual void GenerateData ()
virtual void GenerateInputRequestedRegion ()
virtual bool Halt ()
virtual void Initialize ()
virtual void InitializeIteration ()
virtual void PostProcessOutput ()
virtual TimeStepType ResolveTimeStep (const std::vector< TimeStepType > &timeStepList, const std::vector< bool > &valid) const
virtual void SetElapsedIterations (IdentifierType _arg)
virtual bool ThreadedHalt (void *)
virtual ~FiniteDifferenceImageFilter ()
- Protected Member Functions inherited from itk::InPlaceImageFilter< TInputImage, TOutputImage >
virtual void AllocateOutputs ()
virtual bool GetRunningInPlace () const
 InPlaceImageFilter ()
virtual void ReleaseInputs ()
 ~InPlaceImageFilter ()
- Protected Member Functions inherited from itk::ImageToImageFilter< TInputImage, TOutputImage >
virtual void CallCopyInputRegionToOutputRegion (OutputImageRegionType &destRegion, const InputImageRegionType &srcRegion)
virtual void CallCopyOutputRegionToInputRegion (InputImageRegionType &destRegion, const OutputImageRegionType &srcRegion)
 ImageToImageFilter ()
virtual void VerifyInputInformation ()
 ~ImageToImageFilter ()
void PushBackInput (const DataObject *input)
void PushFrontInput (const DataObject *input)
- Protected Member Functions inherited from itk::ImageSource< TOutputImage >
virtual void AfterThreadedGenerateData ()
virtual void BeforeThreadedGenerateData ()
 ImageSource ()
virtual unsigned int SplitRequestedRegion (unsigned int i, unsigned int num, OutputImageRegionType &splitRegion)
virtual void ThreadedGenerateData (const OutputImageRegionType &outputRegionForThread, ThreadIdType threadId)
virtual ~ImageSource ()
- Protected Member Functions inherited from itk::ProcessObject
virtual void AddInput (DataObject *input)
virtual void AddOutput (DataObject *output)
bool AddRequiredInputName (const DataObjectIdentifierType &)
virtual void CacheInputReleaseDataFlags ()
virtual void GenerateOutputInformation ()
virtual void GenerateOutputRequestedRegion (DataObject *output)
virtual const
DataObjectPointerArraySizeType & 		GetNumberOfRequiredInputs ()
virtual const
DataObjectPointerArraySizeType & 		GetNumberOfRequiredOutputs ()
bool IsIndexedName (const DataObjectIdentifierType &) const
bool IsRequiredInputName (const DataObjectIdentifierType &) const
 itkLegacyMacro (virtual void RemoveInput(DataObject *input))
 itkLegacyMacro (virtual void RemoveOutput(DataObject *output))
 itkLegacyMacro (void SetNumberOfInputs(DataObjectPointerArraySizeType num))
 itkLegacyMacro (void SetNumberOfOutputs(DataObjectPointerArraySizeType num))
DataObjectPointerArraySizeType MakeIndexFromName (const DataObjectIdentifierType &) const
DataObjectIdentifierType MakeNameFromIndex (DataObjectPointerArraySizeType) const
 ProcessObject ()
virtual void PropagateResetPipeline ()
virtual void RemoveInput (const DataObjectIdentifierType &key)
virtual void RemoveInput (DataObjectPointerArraySizeType)
virtual void RemoveOutput (const DataObjectIdentifierType &key)
virtual void RemoveOutput (DataObjectPointerArraySizeType idx)
bool RemoveRequiredInputName (const DataObjectIdentifierType &)
virtual void RestoreInputReleaseDataFlags ()
virtual void SetInput (const DataObjectIdentifierType &key, DataObject *input)
virtual void SetNthInput (DataObjectPointerArraySizeType num, DataObject *input)
virtual void SetNthOutput (DataObjectPointerArraySizeType num, DataObject *output)
void SetNumberOfIndexedInputs (DataObjectPointerArraySizeType num)
void SetNumberOfIndexedOutputs (DataObjectPointerArraySizeType num)
virtual void SetNumberOfRequiredInputs (DataObjectPointerArraySizeType)
virtual void SetNumberOfRequiredOutputs (DataObjectPointerArraySizeType _arg)
virtual void SetOutput (const DataObjectIdentifierType &key, DataObject *output)
virtual void SetPrimaryInput (DataObject *input)
virtual void SetPrimaryOutput (DataObject *output)
void SetRequiredInputNames (const NameArray &)
virtual void VerifyPreconditions ()
 ~ProcessObject ()
DataObject * GetInput (const DataObjectIdentifierType &key)
const DataObject * GetInput (const DataObjectIdentifierType &key) const
DataObject * GetInput (DataObjectPointerArraySizeType)
const DataObject * GetInput (DataObjectPointerArraySizeType idx) const
DataObject * GetPrimaryInput ()
const DataObject * GetPrimaryInput () const
DataObject * GetOutput (const DataObjectIdentifierType &key)
const DataObject * GetOutput (const DataObjectIdentifierType &key) const
DataObject * GetOutput (DataObjectPointerArraySizeType idx)
const DataObject * GetOutput (DataObjectPointerArraySizeType idx) const
DataObject * GetPrimaryOutput ()
const DataObject * GetPrimaryOutput () const
- Protected Member Functions inherited from itk::Object
 Object ()
bool PrintObservers (std::ostream &os, Indent indent) const
virtual void SetTimeStamp (const TimeStamp &time)
virtual ~Object ()
- Protected Member Functions inherited from itk::LightObject
virtual LightObject::Pointer InternalClone () const
 LightObject ()
virtual void PrintHeader (std::ostream &os, Indent indent) const
virtual void PrintTrailer (std::ostream &os, Indent indent) const
virtual ~LightObject ()

Private Member Functions

 DenseFiniteDifferenceImageFilter (const Self &)
void operator= (const Self &)

Static Private Member Functions

static ITK_THREAD_RETURN_TYPE ApplyUpdateThreaderCallback (void *arg)
static ITK_THREAD_RETURN_TYPE CalculateChangeThreaderCallback (void *arg)

Private Attributes

UpdateBufferType::Pointer m_UpdateBuffer

Additional Inherited Members

- Protected Attributes inherited from itk::FiniteDifferenceImageFilter< TInputImage, TOutputImage >
IdentifierType m_ElapsedIterations
bool m_IsInitialized
bool m_ManualReinitialization
double m_MaximumRMSError
IdentifierType m_NumberOfIterations
double m_RMSChange

Detailed Description

template<class TInputImage, class TOutputImage>
class itk::DenseFiniteDifferenceImageFilter< TInputImage, TOutputImage >

This filter implements a layer of the finite difference solver hierarchy that performs ``dense'' iteration, ie. iteration over all pixels in the input and output at each change calculation and update step. Dense iteration is in contrast to a ``sparse'' iteration over a subset of the pixels. See documentation for FiniteDifferenceImageFilter for an overview of the iterative finite difference algorithm:

$u_{\mathbf{i}}^{n+1}=u^n_{\mathbf{i}}+\Delta u^n_{\mathbf{i}}\Delta t$
The generic code for performing iterations and updates at each time step is inherited from the parent class. This class defines an update buffer for $ \Delta $ and the methods CalculateChange() and ApplyUpdate(). These methods are designed to automatically thread their execution. $ \Delta $ is defined as an image of identical size and type as the output image.
As we descend through each layer in the hierarchy, we know more and more about the specific application of our filter. At this level, we have committed to iteration over each pixel in an image. We take advantage of that knowledge to multithread the iteration and update methods.
Inputs and Outputs
This is an image to image filter. The specific types of the images are not fixed at this level in the hierarchy.
How to use this class
This filter is only one layer in a branch the finite difference solver hierarchy. It does not define the function used in the CalculateChange() and it does not define the stopping criteria (Halt method). To use this class, subclass it to a specific instance that supplies a function and Halt() method.
See also:
FiniteDifferenceImageFilter

Definition at line 69 of file itkDenseFiniteDifferenceImageFilter.h.

Member Typedef Documentation

template<class TInputImage, class TOutputImage>
typedef SmartPointer< const Self > itk::DenseFiniteDifferenceImageFilter< TInputImage, TOutputImage >::ConstPointer

Reimplemented from itk::FiniteDifferenceImageFilter< TInputImage, TOutputImage >.

Reimplemented in itk::CurvatureRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField, TImageForceFunction >, itk::LevelSetMotionRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >, itk::CurvatureFlowImageFilter< TInputImage, TOutputImage >, itk::DiffeomorphicDemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >, itk::MinMaxCurvatureFlowImageFilter< TInputImage, TOutputImage >, itk::BinaryMinMaxCurvatureFlowImageFilter< TInputImage, TOutputImage >, itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >, itk::FastSymmetricForcesDemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >, itk::AnisotropicDiffusionImageFilter< TInputImage, TOutputImage >, itk::SymmetricForcesDemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >, itk::VectorCurvatureAnisotropicDiffusionImageFilter< TInputImage, TOutputImage >, itk::DemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >, itk::VectorGradientAnisotropicDiffusionImageFilter< TInputImage, TOutputImage >, itk::CurvatureAnisotropicDiffusionImageFilter< TInputImage, TOutputImage >, and itk::GradientAnisotropicDiffusionImageFilter< TInputImage, TOutputImage >.

Definition at line 80 of file itkDenseFiniteDifferenceImageFilter.h.

template<class TInputImage, class TOutputImage>
typedef Superclass::FiniteDifferenceFunctionType itk::DenseFiniteDifferenceImageFilter< TInputImage, TOutputImage >::FiniteDifferenceFunctionType

The value type of the time step. This is distinct from PixelType because PixelType may often be a vector value, while the TimeStep is a scalar value.

Reimplemented from itk::FiniteDifferenceImageFilter< TInputImage, TOutputImage >.

Reimplemented in itk::CurvatureRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField, TImageForceFunction >, itk::FastSymmetricForcesDemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >, itk::LevelSetMotionRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >, itk::CurvatureFlowImageFilter< TInputImage, TOutputImage >, itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >, itk::DiffeomorphicDemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >, itk::SymmetricForcesDemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >, itk::DemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >, itk::MinMaxCurvatureFlowImageFilter< TInputImage, TOutputImage >, and itk::BinaryMinMaxCurvatureFlowImageFilter< TInputImage, TOutputImage >.

Definition at line 89 of file itkDenseFiniteDifferenceImageFilter.h.

template<class TInputImage, class TOutputImage>
typedef Superclass::InputImageType itk::DenseFiniteDifferenceImageFilter< TInputImage, TOutputImage >::InputImageType

Convenient typedefs

Reimplemented from itk::FiniteDifferenceImageFilter< TInputImage, TOutputImage >.

Reimplemented in itk::CurvatureFlowImageFilter< TInputImage, TOutputImage >, and itk::AnisotropicDiffusionImageFilter< TInputImage, TOutputImage >.

Definition at line 83 of file itkDenseFiniteDifferenceImageFilter.h.

template<class TInputImage, class TOutputImage>
typedef Superclass::OutputImageType itk::DenseFiniteDifferenceImageFilter< TInputImage, TOutputImage >::OutputImageType

Superclass typedefs.

Reimplemented from itk::FiniteDifferenceImageFilter< TInputImage, TOutputImage >.

Reimplemented in itk::CurvatureFlowImageFilter< TInputImage, TOutputImage >, itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >, itk::MinMaxCurvatureFlowImageFilter< TInputImage, TOutputImage >, itk::BinaryMinMaxCurvatureFlowImageFilter< TInputImage, TOutputImage >, and itk::AnisotropicDiffusionImageFilter< TInputImage, TOutputImage >.

Definition at line 87 of file itkDenseFiniteDifferenceImageFilter.h.

template<class TInputImage, class TOutputImage>
typedef Superclass::PixelType itk::DenseFiniteDifferenceImageFilter< TInputImage, TOutputImage >::PixelType

The pixel type of the output image will be used in computations. Inherited from the superclass.

Reimplemented from itk::FiniteDifferenceImageFilter< TInputImage, TOutputImage >.

Reimplemented in itk::CurvatureFlowImageFilter< TInputImage, TOutputImage >, and itk::AnisotropicDiffusionImageFilter< TInputImage, TOutputImage >.

Definition at line 97 of file itkDenseFiniteDifferenceImageFilter.h.

template<class TInputImage, class TOutputImage>
typedef SmartPointer< Self > itk::DenseFiniteDifferenceImageFilter< TInputImage, TOutputImage >::Pointer

Reimplemented from itk::FiniteDifferenceImageFilter< TInputImage, TOutputImage >.

Reimplemented in itk::CurvatureRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField, TImageForceFunction >, itk::LevelSetMotionRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >, itk::CurvatureFlowImageFilter< TInputImage, TOutputImage >, itk::DiffeomorphicDemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >, itk::MinMaxCurvatureFlowImageFilter< TInputImage, TOutputImage >, itk::BinaryMinMaxCurvatureFlowImageFilter< TInputImage, TOutputImage >, itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >, itk::FastSymmetricForcesDemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >, itk::AnisotropicDiffusionImageFilter< TInputImage, TOutputImage >, itk::SymmetricForcesDemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >, itk::VectorCurvatureAnisotropicDiffusionImageFilter< TInputImage, TOutputImage >, itk::DemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >, itk::VectorGradientAnisotropicDiffusionImageFilter< TInputImage, TOutputImage >, itk::CurvatureAnisotropicDiffusionImageFilter< TInputImage, TOutputImage >, and itk::GradientAnisotropicDiffusionImageFilter< TInputImage, TOutputImage >.

Definition at line 79 of file itkDenseFiniteDifferenceImageFilter.h.

template<class TInputImage, class TOutputImage>
typedef DenseFiniteDifferenceImageFilter itk::DenseFiniteDifferenceImageFilter< TInputImage, TOutputImage >::Self

Standard class typedefs

Reimplemented from itk::FiniteDifferenceImageFilter< TInputImage, TOutputImage >.

Reimplemented in itk::CurvatureRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField, TImageForceFunction >, itk::LevelSetMotionRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >, itk::CurvatureFlowImageFilter< TInputImage, TOutputImage >, itk::DiffeomorphicDemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >, itk::MinMaxCurvatureFlowImageFilter< TInputImage, TOutputImage >, itk::BinaryMinMaxCurvatureFlowImageFilter< TInputImage, TOutputImage >, itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >, itk::FastSymmetricForcesDemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >, itk::AnisotropicDiffusionImageFilter< TInputImage, TOutputImage >, itk::SymmetricForcesDemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >, itk::DemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >, itk::VectorCurvatureAnisotropicDiffusionImageFilter< TInputImage, TOutputImage >, itk::VectorGradientAnisotropicDiffusionImageFilter< TInputImage, TOutputImage >, itk::CurvatureAnisotropicDiffusionImageFilter< TInputImage, TOutputImage >, and itk::GradientAnisotropicDiffusionImageFilter< TInputImage, TOutputImage >.

Definition at line 75 of file itkDenseFiniteDifferenceImageFilter.h.

template<class TInputImage, class TOutputImage>
typedef FiniteDifferenceImageFilter< TInputImage, TOutputImage > itk::DenseFiniteDifferenceImageFilter< TInputImage, TOutputImage >::Superclass

Reimplemented from itk::FiniteDifferenceImageFilter< TInputImage, TOutputImage >.

Reimplemented in itk::CurvatureRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField, TImageForceFunction >, itk::LevelSetMotionRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >, itk::CurvatureFlowImageFilter< TInputImage, TOutputImage >, itk::DiffeomorphicDemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >, itk::MinMaxCurvatureFlowImageFilter< TInputImage, TOutputImage >, itk::BinaryMinMaxCurvatureFlowImageFilter< TInputImage, TOutputImage >, itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >, itk::FastSymmetricForcesDemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >, itk::AnisotropicDiffusionImageFilter< TInputImage, TOutputImage >, itk::SymmetricForcesDemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >, itk::VectorCurvatureAnisotropicDiffusionImageFilter< TInputImage, TOutputImage >, itk::DemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >, itk::VectorGradientAnisotropicDiffusionImageFilter< TInputImage, TOutputImage >, itk::CurvatureAnisotropicDiffusionImageFilter< TInputImage, TOutputImage >, and itk::GradientAnisotropicDiffusionImageFilter< TInputImage, TOutputImage >.

Definition at line 77 of file itkDenseFiniteDifferenceImageFilter.h.

template<class TInputImage, class TOutputImage>
typedef UpdateBufferType::RegionType itk::DenseFiniteDifferenceImageFilter< TInputImage, TOutputImage >::ThreadRegionType
protected

The type of region used for multithreading

Definition at line 150 of file itkDenseFiniteDifferenceImageFilter.h.

template<class TInputImage, class TOutputImage>
typedef Superclass::TimeStepType itk::DenseFiniteDifferenceImageFilter< TInputImage, TOutputImage >::TimeStepType

The value type of a time step. Inherited from the superclass.

Reimplemented from itk::FiniteDifferenceImageFilter< TInputImage, TOutputImage >.

Reimplemented in itk::FastSymmetricForcesDemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >, itk::CurvatureFlowImageFilter< TInputImage, TOutputImage >, itk::CurvatureRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField, TImageForceFunction >, itk::DiffeomorphicDemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >, itk::LevelSetMotionRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >, itk::SymmetricForcesDemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >, itk::AnisotropicDiffusionImageFilter< TInputImage, TOutputImage >, and itk::DemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >.

Definition at line 100 of file itkDenseFiniteDifferenceImageFilter.h.

template<class TInputImage, class TOutputImage>
typedef OutputImageType itk::DenseFiniteDifferenceImageFilter< TInputImage, TOutputImage >::UpdateBufferType

The container type for the update buffer.

Reimplemented in itk::AnisotropicDiffusionImageFilter< TInputImage, TOutputImage >, itk::VectorCurvatureAnisotropicDiffusionImageFilter< TInputImage, TOutputImage >, itk::VectorGradientAnisotropicDiffusionImageFilter< TInputImage, TOutputImage >, itk::CurvatureAnisotropicDiffusionImageFilter< TInputImage, TOutputImage >, and itk::GradientAnisotropicDiffusionImageFilter< TInputImage, TOutputImage >.

Definition at line 103 of file itkDenseFiniteDifferenceImageFilter.h.

Constructor & Destructor Documentation

template<class TInputImage, class TOutputImage>
itk::DenseFiniteDifferenceImageFilter< TInputImage, TOutputImage >::DenseFiniteDifferenceImageFilter ( )
inlineprotected

End concept checking

Definition at line 119 of file itkDenseFiniteDifferenceImageFilter.h.

template<class TInputImage, class TOutputImage>
itk::DenseFiniteDifferenceImageFilter< TInputImage, TOutputImage >::~DenseFiniteDifferenceImageFilter ( )
inlineprotected

End concept checking

Definition at line 121 of file itkDenseFiniteDifferenceImageFilter.h.

template<class TInputImage, class TOutputImage>
itk::DenseFiniteDifferenceImageFilter< TInputImage, TOutputImage >::DenseFiniteDifferenceImageFilter ( const Self &  )
private

Member Function Documentation

template<class TInputImage, class TOutputImage>
virtual void itk::DenseFiniteDifferenceImageFilter< TInputImage, TOutputImage >::AllocateUpdateBuffer ( )
protectedvirtual

This method allocates storage in m_UpdateBuffer. It is called from Superclass::GenerateData().

Implements itk::FiniteDifferenceImageFilter< TInputImage, TOutputImage >.

Reimplemented in itk::DiffeomorphicDemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >, and itk::FastSymmetricForcesDemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >.

template<class TInputImage, class TOutputImage>
virtual void itk::DenseFiniteDifferenceImageFilter< TInputImage, TOutputImage >::ApplyUpdate ( const TimeStepType &  dt)
protectedvirtual

This method applies changes from the m_UpdateBuffer to the output using the ThreadedApplyUpdate() method and a multithreading mechanism. "dt" is the time step to use for the update of each pixel.

Reimplemented in itk::LevelSetMotionRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >, itk::CurvatureRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField, TImageForceFunction >, and itk::DemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >.

template<class TInputImage, class TOutputImage>
static ITK_THREAD_RETURN_TYPE itk::DenseFiniteDifferenceImageFilter< TInputImage, TOutputImage >::ApplyUpdateThreaderCallback ( void *  arg)
staticprivate

This callback method uses ImageSource::SplitRequestedRegion to acquire an output region that it passes to ThreadedApplyUpdate for processing.

template<class TInputImage, class TOutputImage>
virtual TimeStepType itk::DenseFiniteDifferenceImageFilter< TInputImage, TOutputImage >::CalculateChange ( )
protectedvirtual

This method populates an update buffer with changes for each pixel in the output using the ThreadedCalculateChange() method and a multithreading mechanism. Returns value is a time step to be used for the update.

Implements itk::FiniteDifferenceImageFilter< TInputImage, TOutputImage >.

template<class TInputImage, class TOutputImage>
static ITK_THREAD_RETURN_TYPE itk::DenseFiniteDifferenceImageFilter< TInputImage, TOutputImage >::CalculateChangeThreaderCallback ( void *  arg)
staticprivate

This callback method uses SplitUpdateContainer to acquire a region which it then passes to ThreadedCalculateChange for processing.

template<class TInputImage, class TOutputImage>
virtual void itk::DenseFiniteDifferenceImageFilter< TInputImage, TOutputImage >::CopyInputToOutput ( )
protectedvirtual

A simple method to copy the data from the input to the output. ( Supports "read-only" image adaptors in the case where the input image type converts to a different output image type. )

Implements itk::FiniteDifferenceImageFilter< TInputImage, TOutputImage >.

Reimplemented in itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >.

template<class TInputImage, class TOutputImage>
virtual const char* itk::DenseFiniteDifferenceImageFilter< TInputImage, TOutputImage >::GetNameOfClass ( ) const
virtual

Run-time type information (and related methods)

Reimplemented from itk::FiniteDifferenceImageFilter< TInputImage, TOutputImage >.

Reimplemented in itk::CurvatureRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField, TImageForceFunction >, itk::LevelSetMotionRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >, itk::CurvatureFlowImageFilter< TInputImage, TOutputImage >, itk::DiffeomorphicDemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >, itk::MinMaxCurvatureFlowImageFilter< TInputImage, TOutputImage >, itk::BinaryMinMaxCurvatureFlowImageFilter< TInputImage, TOutputImage >, itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >, itk::FastSymmetricForcesDemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >, itk::SymmetricForcesDemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >, itk::AnisotropicDiffusionImageFilter< TInputImage, TOutputImage >, itk::VectorCurvatureAnisotropicDiffusionImageFilter< TInputImage, TOutputImage >, itk::DemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >, itk::VectorGradientAnisotropicDiffusionImageFilter< TInputImage, TOutputImage >, itk::CurvatureAnisotropicDiffusionImageFilter< TInputImage, TOutputImage >, and itk::GradientAnisotropicDiffusionImageFilter< TInputImage, TOutputImage >.

template<class TInputImage, class TOutputImage>
virtual UpdateBufferType* itk::DenseFiniteDifferenceImageFilter< TInputImage, TOutputImage >::GetUpdateBuffer ( )
inlineprotectedvirtual

Method to allow subclasses to get direct access to the update buffer

Definition at line 137 of file itkDenseFiniteDifferenceImageFilter.h.

template<class TInputImage, class TOutputImage>
void itk::DenseFiniteDifferenceImageFilter< TInputImage, TOutputImage >::operator= ( const Self &  )
private

PushBackInput(), PushFronInput() in the public section force the input to be the type expected by an ImageToImageFilter. However, these methods end of "hiding" the versions from the superclass (ProcessObject) whose arguments are DataObjects. Here, we re-expose the versions from ProcessObject to avoid warnings about hiding methods from the superclass.

Reimplemented from itk::FiniteDifferenceImageFilter< TInputImage, TOutputImage >.

Reimplemented in itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >, itk::LevelSetMotionRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >, itk::CurvatureFlowImageFilter< TInputImage, TOutputImage >, itk::CurvatureRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField, TImageForceFunction >, itk::FastSymmetricForcesDemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >, itk::DiffeomorphicDemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >, itk::AnisotropicDiffusionImageFilter< TInputImage, TOutputImage >, itk::DemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >, itk::MinMaxCurvatureFlowImageFilter< TInputImage, TOutputImage >, itk::SymmetricForcesDemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >, itk::BinaryMinMaxCurvatureFlowImageFilter< TInputImage, TOutputImage >, itk::VectorCurvatureAnisotropicDiffusionImageFilter< TInputImage, TOutputImage >, itk::CurvatureAnisotropicDiffusionImageFilter< TInputImage, TOutputImage >, itk::VectorGradientAnisotropicDiffusionImageFilter< TInputImage, TOutputImage >, and itk::GradientAnisotropicDiffusionImageFilter< TInputImage, TOutputImage >.

template<class TInputImage, class TOutputImage>
void itk::DenseFiniteDifferenceImageFilter< TInputImage, TOutputImage >::PrintSelf ( std::ostream &  os,
Indent  indent 
) const
protectedvirtual

End concept checking

Reimplemented from itk::FiniteDifferenceImageFilter< TInputImage, TOutputImage >.

Reimplemented in itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >, itk::LevelSetMotionRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >, itk::CurvatureRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField, TImageForceFunction >, itk::DiffeomorphicDemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >, itk::CurvatureFlowImageFilter< TInputImage, TOutputImage >, itk::AnisotropicDiffusionImageFilter< TInputImage, TOutputImage >, itk::FastSymmetricForcesDemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >, itk::MinMaxCurvatureFlowImageFilter< TInputImage, TOutputImage >, itk::DemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >, itk::SymmetricForcesDemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >, and itk::BinaryMinMaxCurvatureFlowImageFilter< TInputImage, TOutputImage >.

template<class TInputImage, class TOutputImage>
virtual void itk::DenseFiniteDifferenceImageFilter< TInputImage, TOutputImage >::ThreadedApplyUpdate ( const TimeStepType &  dt,
const ThreadRegionType &  regionToProcess,
ThreadIdType  threadId 
)
protectedvirtual

Does the actual work of updating the output from the UpdateContainer over an output region supplied by the multithreading mechanism.

See also:
ApplyUpdate
ApplyUpdateThreaderCallback
template<class TInputImage, class TOutputImage>
virtual TimeStepType itk::DenseFiniteDifferenceImageFilter< TInputImage, TOutputImage >::ThreadedCalculateChange ( const ThreadRegionType &  regionToProcess,
ThreadIdType  threadId 
)
protectedvirtual

Does the actual work of calculating change over a region supplied by the multithreading mechanism.

See also:
CalculateChange
CalculateChangeThreaderCallback
template<class TInputImage, class TOutputImage>
itk::DenseFiniteDifferenceImageFilter< TInputImage, TOutputImage >::typedef ( Concept::MultiplyOperator< PixelType, double >  )

Begin concept checking This class requires OutputTimesDoubleCheck in the form of ( Concept::MultiplyOperator< PixelType, double > )

template<class TInputImage, class TOutputImage>
itk::DenseFiniteDifferenceImageFilter< TInputImage, TOutputImage >::typedef ( Concept::AdditiveOperators< PixelType >  )

This class requires OutputAdditiveOperatorsCheck in the form of ( Concept::AdditiveOperators< PixelType > )

template<class TInputImage, class TOutputImage>
itk::DenseFiniteDifferenceImageFilter< TInputImage, TOutputImage >::typedef ( Concept::AdditiveAndAssignOperators< PixelType >  )

This class requires OutputAdditiveAndAssignOperatorsCheck in the form of ( Concept::AdditiveAndAssignOperators< PixelType > )

template<class TInputImage, class TOutputImage>
itk::DenseFiniteDifferenceImageFilter< TInputImage, TOutputImage >::typedef ( Concept::Convertible< typename TInputImage::PixelType, PixelType >  )

This class requires InputConvertibleToOutputCheck in the form of ( Concept::Convertible< typename TInputImage::PixelType, PixelType > )

Member Data Documentation

template<class TInputImage, class TOutputImage>
const unsigned int itk::DenseFiniteDifferenceImageFilter< TInputImage, TOutputImage >::ImageDimension = Superclass::ImageDimension
static

Dimensionality of input and output data is assumed to be the same. It is inherited from the superclass.

Reimplemented from itk::FiniteDifferenceImageFilter< TInputImage, TOutputImage >.

Reimplemented in itk::CurvatureFlowImageFilter< TInputImage, TOutputImage >, itk::CurvatureRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField, TImageForceFunction >, itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >, itk::DiffeomorphicDemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >, itk::MinMaxCurvatureFlowImageFilter< TInputImage, TOutputImage >, itk::FastSymmetricForcesDemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >, itk::BinaryMinMaxCurvatureFlowImageFilter< TInputImage, TOutputImage >, itk::AnisotropicDiffusionImageFilter< TInputImage, TOutputImage >, itk::VectorCurvatureAnisotropicDiffusionImageFilter< TInputImage, TOutputImage >, itk::VectorGradientAnisotropicDiffusionImageFilter< TInputImage, TOutputImage >, itk::CurvatureAnisotropicDiffusionImageFilter< TInputImage, TOutputImage >, and itk::GradientAnisotropicDiffusionImageFilter< TInputImage, TOutputImage >.

Definition at line 93 of file itkDenseFiniteDifferenceImageFilter.h.

template<class TInputImage, class TOutputImage>
UpdateBufferType::Pointer itk::DenseFiniteDifferenceImageFilter< TInputImage, TOutputImage >::m_UpdateBuffer
private

The buffer that holds the updates for an iteration of the algorithm.

Definition at line 191 of file itkDenseFiniteDifferenceImageFilter.h.

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