itk::ImageShapeModelEstimatorBase< TInputImage, TOutputImage > Class Template Reference

#include <itkImageShapeModelEstimatorBase.h>

Inheritance diagram for itk::ImageShapeModelEstimatorBase< TInputImage, TOutputImage >:

Collaboration diagram for itk::ImageShapeModelEstimatorBase< TInputImage, TOutputImage >:

List of all members.

Public Types
typedef SmartPointer< const Self >	ConstPointer
typedef SmartPointer< Self >	Pointer
typedef ImageShapeModelEstimatorBase	Self
typedef ImageToImageFilter < TInputImage, TOutputImage >	Superclass
Public Types inherited from itk::ImageToImageFilter< TInputImage, TOutputImage >
typedef InputImageType::ConstPointer	InputImageConstPointer
typedef InputImageType::PixelType	InputImagePixelType
typedef InputImageType::RegionType	InputImageRegionType
typedef Superclass::OutputImagePixelType	OutputImagePixelType
typedef Superclass::OutputImageRegionType	OutputImageRegionType
Public Types inherited from itk::ImageSource< TOutputImage >
typedef Superclass::DataObjectIdentifierType	DataObjectIdentifierType
typedef DataObject::Pointer	DataObjectPointer
typedef Superclass::DataObjectPointerArraySizeType	DataObjectPointerArraySizeType
typedef OutputImageType::Pointer	OutputImagePointer
typedef TOutputImage	OutputImageType
Public Types inherited from itk::ProcessObject
typedef std::vector < DataObjectPointer >	DataObjectPointerArray
typedef std::vector < DataObjectIdentifierType >	NameArray
Public Types inherited from itk::Object
Public Types inherited from itk::LightObject

Public Member Functions
virtual const char *	GetNameOfClass () const
Public Member Functions inherited from itk::ImageToImageFilter< TInputImage, TOutputImage >
const InputImageType *	GetInput (void) const
const InputImageType *	GetInput (unsigned int idx) const
virtual void	PopBackInput ()
virtual void	PopFrontInput ()
virtual void	PushBackInput (const InputImageType *image)
virtual void	PushFrontInput (const InputImageType *image)
virtual void	SetInput (const InputImageType *image)
virtual void	SetInput (unsigned int, const TInputImage *image)
Public Member Functions inherited from itk::ImageSource< TOutputImage >
OutputImageType *	GetOutput (unsigned int idx)
virtual void	GraftNthOutput (unsigned int idx, DataObject *output)
virtual void	GraftOutput (DataObject *output)
virtual void	GraftOutput (const DataObjectIdentifierType &key, DataObject *output)
OutputImageType *	GetOutput (void)
const OutputImageType *	GetOutput (void) const
virtual ProcessObject::DataObjectPointer	MakeOutput (ProcessObject::DataObjectPointerArraySizeType idx)
Public Member Functions inherited from itk::ProcessObject
virtual void	AbortGenerateDataOff ()
virtual void	AbortGenerateDataOn ()
virtual void	EnlargeOutputRequestedRegion (DataObject *)
virtual const bool &	GetAbortGenerateData ()
NameArray	GetInputNames () const
MultiThreader *	GetMultiThreader () const
DataObjectPointerArraySizeType	GetNumberOfIndexedInputs () const
DataObjectPointerArraySizeType	GetNumberOfInputs () const
DataObjectPointerArraySizeType	GetNumberOfOutputs () const
virtual DataObjectPointerArraySizeType	GetNumberOfValidRequiredInputs () const
NameArray	GetOutputNames () const
virtual const float &	GetProgress ()
NameArray	GetRequiredInputNames () const
bool	HasInput (const DataObjectIdentifierType &key) const
bool	HasOutput (const DataObjectIdentifierType &key) const
virtual DataObjectPointer	MakeOutput (const DataObjectIdentifierType &)
virtual void	PrepareOutputs ()
virtual void	PropagateRequestedRegion (DataObject *output)
virtual void	ResetPipeline ()
virtual void	SetAbortGenerateData (bool _arg)
virtual void	SetProgress (float _arg)
virtual void	Update ()
virtual void	UpdateLargestPossibleRegion ()
virtual void	UpdateOutputData (DataObject *output)
virtual void	UpdateOutputInformation ()
void	UpdateProgress (float amount)
DataObjectPointerArray	GetInputs ()
DataObjectPointerArray	GetOutputs ()
DataObjectPointerArray	GetIndexedInputs ()
DataObjectPointerArray	GetIndexedOutputs ()
DataObjectPointerArraySizeType	GetNumberOfIndexedOutputs () const
virtual void	SetReleaseDataFlag (bool flag)
virtual bool	GetReleaseDataFlag () const
void	ReleaseDataFlagOn ()
void	ReleaseDataFlagOff ()
virtual void	SetReleaseDataBeforeUpdateFlag (bool _arg)
virtual const bool &	GetReleaseDataBeforeUpdateFlag ()
virtual void	ReleaseDataBeforeUpdateFlagOn ()
virtual void	ReleaseDataBeforeUpdateFlagOff ()
virtual void	SetNumberOfThreads (ThreadIdType _arg)
virtual const ThreadIdType &	GetNumberOfThreads ()
Public Member Functions inherited from itk::Object
unsigned long	AddObserver (const EventObject &event, Command *)
unsigned long	AddObserver (const EventObject &event, Command *) const
virtual LightObject::Pointer	CreateAnother () const
virtual void	DebugOff () const
virtual void	DebugOn () const
Command *	GetCommand (unsigned long tag)
bool	GetDebug () const
MetaDataDictionary &	GetMetaDataDictionary (void)
const MetaDataDictionary &	GetMetaDataDictionary (void) const
virtual unsigned long	GetMTime () const
virtual const TimeStamp &	GetTimeStamp () const
bool	HasObserver (const EventObject &event) const
void	InvokeEvent (const EventObject &)
void	InvokeEvent (const EventObject &) const
virtual void	Modified () const
virtual void	Register () const
void	RemoveAllObservers ()
void	RemoveObserver (unsigned long tag)
void	SetDebug (bool debugFlag) const
void	SetMetaDataDictionary (const MetaDataDictionary &rhs)
virtual void	SetReferenceCount (int)
virtual void	UnRegister () const
Public Member Functions inherited from itk::LightObject
virtual void	Delete ()
virtual int	GetReferenceCount () const
	itkCloneMacro (Self)
void	Print (std::ostream &os, Indent indent=0) const

Protected Member Functions
virtual void	GenerateData ()
Protected Member Functions inherited from itk::ImageToImageFilter< TInputImage, TOutputImage >
virtual void	CallCopyInputRegionToOutputRegion (OutputImageRegionType &destRegion, const InputImageRegionType &srcRegion)
virtual void	CallCopyOutputRegionToInputRegion (InputImageRegionType &destRegion, const OutputImageRegionType &srcRegion)
virtual void	GenerateInputRequestedRegion ()
	ImageToImageFilter ()
virtual void	VerifyInputInformation ()
	~ImageToImageFilter ()
void	PushBackInput (const DataObject *input)
void	PushFrontInput (const DataObject *input)
Protected Member Functions inherited from itk::ImageSource< TOutputImage >
virtual void	AfterThreadedGenerateData ()
virtual void	AllocateOutputs ()
virtual void	BeforeThreadedGenerateData ()
	ImageSource ()
virtual unsigned int	SplitRequestedRegion (unsigned int i, unsigned int num, OutputImageRegionType &splitRegion)
virtual void	ThreadedGenerateData (const OutputImageRegionType &outputRegionForThread, ThreadIdType threadId)
virtual	~ImageSource ()
Protected Member Functions inherited from itk::ProcessObject
virtual void	AddInput (DataObject *input)
virtual void	AddOutput (DataObject *output)
bool	AddRequiredInputName (const DataObjectIdentifierType &)
virtual void	CacheInputReleaseDataFlags ()
virtual void	GenerateOutputInformation ()
virtual void	GenerateOutputRequestedRegion (DataObject *output)
virtual const DataObjectPointerArraySizeType &	GetNumberOfRequiredInputs ()
virtual const DataObjectPointerArraySizeType &	GetNumberOfRequiredOutputs ()
bool	IsIndexedName (const DataObjectIdentifierType &) const
bool	IsRequiredInputName (const DataObjectIdentifierType &) const
	itkLegacyMacro (virtual void RemoveInput(DataObject *input))
	itkLegacyMacro (virtual void RemoveOutput(DataObject *output))
	itkLegacyMacro (void SetNumberOfInputs(DataObjectPointerArraySizeType num))
	itkLegacyMacro (void SetNumberOfOutputs(DataObjectPointerArraySizeType num))
DataObjectPointerArraySizeType	MakeIndexFromName (const DataObjectIdentifierType &) const
DataObjectIdentifierType	MakeNameFromIndex (DataObjectPointerArraySizeType) const
	ProcessObject ()
virtual void	PropagateResetPipeline ()
virtual void	ReleaseInputs ()
virtual void	RemoveInput (const DataObjectIdentifierType &key)
virtual void	RemoveInput (DataObjectPointerArraySizeType)
virtual void	RemoveOutput (const DataObjectIdentifierType &key)
virtual void	RemoveOutput (DataObjectPointerArraySizeType idx)
bool	RemoveRequiredInputName (const DataObjectIdentifierType &)
virtual void	RestoreInputReleaseDataFlags ()
virtual void	SetInput (const DataObjectIdentifierType &key, DataObject *input)
virtual void	SetNthInput (DataObjectPointerArraySizeType num, DataObject *input)
virtual void	SetNthOutput (DataObjectPointerArraySizeType num, DataObject *output)
void	SetNumberOfIndexedInputs (DataObjectPointerArraySizeType num)
void	SetNumberOfIndexedOutputs (DataObjectPointerArraySizeType num)
virtual void	SetNumberOfRequiredInputs (DataObjectPointerArraySizeType)
virtual void	SetNumberOfRequiredOutputs (DataObjectPointerArraySizeType _arg)
virtual void	SetOutput (const DataObjectIdentifierType &key, DataObject *output)
virtual void	SetPrimaryInput (DataObject *input)
virtual void	SetPrimaryOutput (DataObject *output)
void	SetRequiredInputNames (const NameArray &)
virtual void	VerifyPreconditions ()
	~ProcessObject ()
DataObject *	GetInput (const DataObjectIdentifierType &key)
const DataObject *	GetInput (const DataObjectIdentifierType &key) const
DataObject *	GetInput (DataObjectPointerArraySizeType)
const DataObject *	GetInput (DataObjectPointerArraySizeType idx) const
DataObject *	GetPrimaryInput ()
const DataObject *	GetPrimaryInput () const
DataObject *	GetOutput (const DataObjectIdentifierType &key)
const DataObject *	GetOutput (const DataObjectIdentifierType &key) const
DataObject *	GetOutput (DataObjectPointerArraySizeType idx)
const DataObject *	GetOutput (DataObjectPointerArraySizeType idx) const
DataObject *	GetPrimaryOutput ()
const DataObject *	GetPrimaryOutput () const
Protected Member Functions inherited from itk::Object
	Object ()
bool	PrintObservers (std::ostream &os, Indent indent) const
virtual void	SetTimeStamp (const TimeStamp &time)
virtual	~Object ()
Protected Member Functions inherited from itk::LightObject
virtual LightObject::Pointer	InternalClone () const
	LightObject ()
virtual void	PrintHeader (std::ostream &os, Indent indent) const
virtual void	PrintTrailer (std::ostream &os, Indent indent) const
virtual	~LightObject ()

Private Member Functions
virtual void	EstimateShapeModels ()=0
	ImageShapeModelEstimatorBase (const Self &)
void	operator= (const Self &)

Private Attributes
InputImagePointer	m_InputImage
typedef TInputImage	InputImageType
typedef TInputImage::Pointer	InputImagePointer
	ImageShapeModelEstimatorBase ()
	~ImageShapeModelEstimatorBase ()
void	PrintSelf (std::ostream &os, Indent indent) const

Additional Inherited Members
Static Public Attributes inherited from itk::ImageToImageFilter< TInputImage, TOutputImage >
static const unsigned int	InputImageDimension = TInputImage::ImageDimension
static const unsigned int	OutputImageDimension = TOutputImage::ImageDimension
Static Public Attributes inherited from itk::ImageSource< TOutputImage >
Protected Types inherited from itk::ImageToImageFilter< TInputImage, TOutputImage >
typedef ImageToImageFilterDetail::ImageRegionCopier < itkGetStaticConstMacro(OutputImageDimension), itkGetStaticConstMacro(InputImageDimension) >	InputToOutputRegionCopierType
typedef ImageToImageFilterDetail::ImageRegionCopier < itkGetStaticConstMacro(InputImageDimension), itkGetStaticConstMacro(OutputImageDimension) >	OutputToInputRegionCopierType

---

Detailed Description

template<class TInputImage, class TOutputImage = Image< double, ::itk::GetImageDimension< TInputImage >::ImageDimension >>
class itk::ImageShapeModelEstimatorBase< TInputImage, TOutputImage >

Base class for statistical shape model estimation.

itkImageShapeModelEstimatorBase is the base class for the ImageShapeModelEstimator objects. It provides the basic function definitions that are inherent to a ImageShapeModelEstimator objects.

This is the SuperClass for the ImageShapeModelEstimator framework. This is an abstract class defining an interface for all such objects available through the ImageShapeModelEstimator framework in the ITK toolkit.

The basic functionality of the ImageShapeModelEstimator framework base class is to generate the ShapeModels. It requires input image to be provided by the user. EstimateShapeModels() is a pure virtual function making this an abstract class. Classes deriving from this class are required to implement the EstimateShapeModels function.

Definition at line 49 of file itkImageShapeModelEstimatorBase.h.

---

Member Typedef Documentation

template<class TInputImage , class TOutputImage = Image< double, ::itk::GetImageDimension< TInputImage >::ImageDimension >>

typedef SmartPointer< const Self > itk::ImageShapeModelEstimatorBase< TInputImage, TOutputImage >::ConstPointer

Reimplemented from itk::ImageToImageFilter< TInputImage, TOutputImage >.

Reimplemented in itk::ImagePCAShapeModelEstimator< TInputImage, TOutputImage >.

Definition at line 57 of file itkImageShapeModelEstimatorBase.h.

template<class TInputImage , class TOutputImage = Image< double, ::itk::GetImageDimension< TInputImage >::ImageDimension >>

typedef TInputImage::Pointer itk::ImageShapeModelEstimatorBase< TInputImage, TOutputImage >::InputImagePointer

Type definitions for the training image.

Reimplemented from itk::ImageToImageFilter< TInputImage, TOutputImage >.

Reimplemented in itk::ImagePCAShapeModelEstimator< TInputImage, TOutputImage >.

Definition at line 64 of file itkImageShapeModelEstimatorBase.h.

template<class TInputImage , class TOutputImage = Image< double, ::itk::GetImageDimension< TInputImage >::ImageDimension >>

typedef TInputImage itk::ImageShapeModelEstimatorBase< TInputImage, TOutputImage >::InputImageType

Type definitions for the training image.

Reimplemented from itk::ImageToImageFilter< TInputImage, TOutputImage >.

Reimplemented in itk::ImagePCAShapeModelEstimator< TInputImage, TOutputImage >.

Definition at line 60 of file itkImageShapeModelEstimatorBase.h.

template<class TInputImage , class TOutputImage = Image< double, ::itk::GetImageDimension< TInputImage >::ImageDimension >>

typedef SmartPointer< Self > itk::ImageShapeModelEstimatorBase< TInputImage, TOutputImage >::Pointer

Reimplemented from itk::ImageToImageFilter< TInputImage, TOutputImage >.

Reimplemented in itk::ImagePCAShapeModelEstimator< TInputImage, TOutputImage >.

Definition at line 56 of file itkImageShapeModelEstimatorBase.h.

template<class TInputImage , class TOutputImage = Image< double, ::itk::GetImageDimension< TInputImage >::ImageDimension >>

typedef ImageShapeModelEstimatorBase itk::ImageShapeModelEstimatorBase< TInputImage, TOutputImage >::Self

Standard class typedefs.

Reimplemented from itk::ImageToImageFilter< TInputImage, TOutputImage >.

Reimplemented in itk::ImagePCAShapeModelEstimator< TInputImage, TOutputImage >.

Definition at line 54 of file itkImageShapeModelEstimatorBase.h.

template<class TInputImage , class TOutputImage = Image< double, ::itk::GetImageDimension< TInputImage >::ImageDimension >>

typedef ImageToImageFilter< TInputImage, TOutputImage > itk::ImageShapeModelEstimatorBase< TInputImage, TOutputImage >::Superclass

Reimplemented from itk::ImageToImageFilter< TInputImage, TOutputImage >.

Reimplemented in itk::ImagePCAShapeModelEstimator< TInputImage, TOutputImage >.

Definition at line 55 of file itkImageShapeModelEstimatorBase.h.

---

Constructor & Destructor Documentation

template<class TInputImage , class TOutputImage = Image< double, ::itk::GetImageDimension< TInputImage >::ImageDimension >>

itk::ImageShapeModelEstimatorBase< TInputImage, TOutputImage >::ImageShapeModelEstimatorBase ( )

protected

Type definitions for the training image.

template<class TInputImage , class TOutputImage = Image< double, ::itk::GetImageDimension< TInputImage >::ImageDimension >>

itk::ImageShapeModelEstimatorBase< TInputImage, TOutputImage >::~ImageShapeModelEstimatorBase ( )

protected

Type definitions for the training image.

template<class TInputImage , class TOutputImage = Image< double, ::itk::GetImageDimension< TInputImage >::ImageDimension >>

itk::ImageShapeModelEstimatorBase< TInputImage, TOutputImage >::ImageShapeModelEstimatorBase ( const Self &  )

private

---

Member Function Documentation

template<class TInputImage , class TOutputImage = Image< double, ::itk::GetImageDimension< TInputImage >::ImageDimension >>

virtual void itk::ImageShapeModelEstimatorBase< TInputImage, TOutputImage >::EstimateShapeModels ( )

privatepure virtual

The core virtual function to perform ShapeModelling of the input data

Implemented in itk::ImagePCAShapeModelEstimator< TInputImage, TOutputImage >.

template<class TInputImage , class TOutputImage = Image< double, ::itk::GetImageDimension< TInputImage >::ImageDimension >>

virtual void itk::ImageShapeModelEstimatorBase< TInputImage, TOutputImage >::GenerateData ( )

protectedvirtual

A version of GenerateData() specific for image processing filters. This implementation will split the processing across multiple threads. The buffer is allocated by this method. Then the BeforeThreadedGenerateData() method is called (if provided). Then, a series of threads are spawned each calling ThreadedGenerateData(). After all the threads have completed processing, the AfterThreadedGenerateData() method is called (if provided). If an image processing filter cannot be threaded, the filter should provide an implementation of GenerateData(). That implementation is responsible for allocating the output buffer. If a filter an be threaded, it should NOT provide a GenerateData() method but should provide a ThreadedGenerateData() instead.

See also:

ThreadedGenerateData()

Reimplemented from itk::ImageSource< TOutputImage >.

Reimplemented in itk::ImagePCAShapeModelEstimator< TInputImage, TOutputImage >.

template<class TInputImage , class TOutputImage = Image< double, ::itk::GetImageDimension< TInputImage >::ImageDimension >>

virtual const char* itk::ImageShapeModelEstimatorBase< TInputImage, TOutputImage >::GetNameOfClass ( ) const

virtual

Run-time type information (and related methods).

Reimplemented from itk::ImageToImageFilter< TInputImage, TOutputImage >.

Reimplemented in itk::ImagePCAShapeModelEstimator< TInputImage, TOutputImage >.

template<class TInputImage , class TOutputImage = Image< double, ::itk::GetImageDimension< TInputImage >::ImageDimension >>

void itk::ImageShapeModelEstimatorBase< TInputImage, TOutputImage >::operator= ( const Self &  )

private

PushBackInput(), PushFronInput() in the public section force the input to be the type expected by an ImageToImageFilter. However, these methods end of "hiding" the versions from the superclass (ProcessObject) whose arguments are DataObjects. Here, we re-expose the versions from ProcessObject to avoid warnings about hiding methods from the superclass.

Reimplemented from itk::ImageToImageFilter< TInputImage, TOutputImage >.

Reimplemented in itk::ImagePCAShapeModelEstimator< TInputImage, TOutputImage >.

template<class TInputImage , class TOutputImage = Image< double, ::itk::GetImageDimension< TInputImage >::ImageDimension >>

void itk::ImageShapeModelEstimatorBase< TInputImage, TOutputImage >::PrintSelf ( std::ostream &  os, Indent  indent  ) const

protectedvirtual

Type definitions for the training image.

Reimplemented from itk::ImageToImageFilter< TInputImage, TOutputImage >.

Reimplemented in itk::ImagePCAShapeModelEstimator< TInputImage, TOutputImage >.

---

Member Data Documentation

template<class TInputImage , class TOutputImage = Image< double, ::itk::GetImageDimension< TInputImage >::ImageDimension >>

InputImagePointer itk::ImageShapeModelEstimatorBase< TInputImage, TOutputImage >::m_InputImage

private

Container for holding the training image

Definition at line 79 of file itkImageShapeModelEstimatorBase.h.

---

The documentation for this class was generated from the following file:

• itkImageShapeModelEstimatorBase.h