ITK
4.2.0
Insight Segmentation and Registration Toolkit
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#include <itkLabelMapOverlayImageFilter.h>
Public Types | |
typedef SmartPointer< const Self > | ConstPointer |
typedef FeatureImageType::ConstPointer | FeatureImageConstPointer |
typedef FeatureImageType::PixelType | FeatureImagePixelType |
typedef FeatureImageType::Pointer | FeatureImagePointer |
typedef FeatureImageType::RegionType | FeatureImageRegionType |
typedef TFeatureImage | FeatureImageType |
typedef Functor::LabelOverlayFunctor < FeatureImagePixelType, LabelMapPixelType, OutputImagePixelType > | FunctorType |
typedef OutputImageType::IndexType | IndexType |
typedef LabelMapType::ConstPointer | LabelMapConstPointer |
typedef LabelMapType::PixelType | LabelMapPixelType |
typedef LabelMapType::Pointer | LabelMapPointer |
typedef LabelMapType::RegionType | LabelMapRegionType |
typedef TLabelMap | LabelMapType |
typedef LabelMapType::LabelObjectType | LabelObjectType |
typedef LabelObjectType::LabelType | LabelType |
typedef LabelObjectType::LengthType | LengthType |
typedef OutputImageType::ConstPointer | OutputImageConstPointer |
typedef OutputImageType::PixelType | OutputImagePixelType |
typedef OutputImageType::Pointer | OutputImagePointer |
typedef OutputImageType::RegionType | OutputImageRegionType |
typedef TOutputImage | OutputImageType |
typedef SmartPointer< Self > | Pointer |
typedef OutputImageType::RegionType | RegionType |
typedef LabelMapOverlayImageFilter | Self |
typedef OutputImageType::SizeType | SizeType |
typedef LabelMapFilter < TLabelMap, TOutputImage > | Superclass |
Public Types inherited from itk::LabelMapFilter< TLabelMap, TOutputImage > | |
typedef InputImageType::ConstPointer | InputImageConstPointer |
typedef InputImageType::PixelType | InputImagePixelType |
typedef InputImageType::Pointer | InputImagePointer |
typedef InputImageType::RegionType | InputImageRegionType |
typedef TLabelMap | InputImageType |
Public Types inherited from itk::ImageToImageFilter< TLabelMap, TOutputImage > | |
Public Types inherited from itk::ImageSource< TOutputImage > | |
typedef Superclass::DataObjectIdentifierType | DataObjectIdentifierType |
typedef DataObject::Pointer | DataObjectPointer |
typedef Superclass::DataObjectPointerArraySizeType | DataObjectPointerArraySizeType |
Public Types inherited from itk::ProcessObject | |
typedef std::vector < DataObjectPointer > | DataObjectPointerArray |
typedef std::vector < DataObjectIdentifierType > | NameArray |
Public Types inherited from itk::Object | |
Public Types inherited from itk::LightObject |
Static Public Member Functions | |
static Pointer | New () |
Static Public Attributes | |
static const unsigned int | InputImageDimension = TLabelMap::ImageDimension |
static const unsigned int | OutputImageDimension = TOutputImage::ImageDimension |
static const unsigned int | ImageDimension = TOutputImage::ImageDimension |
Static Public Attributes inherited from itk::LabelMapFilter< TLabelMap, TOutputImage > | |
Static Public Attributes inherited from itk::ImageToImageFilter< TLabelMap, TOutputImage > | |
Static Public Attributes inherited from itk::ImageSource< TOutputImage > |
Private Member Functions | |
LabelMapOverlayImageFilter (const Self &) | |
void | operator= (const Self &) |
Private Attributes | |
Barrier::Pointer | m_Barrier |
double | m_Opacity |
Additional Inherited Members | |
Protected Attributes inherited from itk::LabelMapFilter< TLabelMap, TOutputImage > | |
FastMutexLock::Pointer | m_LabelObjectContainerLock |
Apply a colormap to a label map and superimpose it on an image.
Apply a colormap to a label map and put it on top of the feature image. The feature image is typically the image from which the labeling was produced. Use the SetInput function to set the LabelMap, and the SetFeatureImage function to set the feature image.
The set of colors is a good selection of distinct colors. The opacity of the label map can be defined by the user. A background label produce a gray pixel with the same intensity than the input one.
This implementation was taken from the Insight Journal paper: http://hdl.handle.net/1926/584 or http://www.insight-journal.org/browse/publication/176
Definition at line 52 of file itkLabelMapOverlayImageFilter.h.
typedef SmartPointer<const Self> itk::LabelMapOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::ConstPointer |
Reimplemented from itk::LabelMapFilter< TLabelMap, TOutputImage >.
Definition at line 60 of file itkLabelMapOverlayImageFilter.h.
typedef FeatureImageType::ConstPointer itk::LabelMapOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::FeatureImageConstPointer |
Definition at line 74 of file itkLabelMapOverlayImageFilter.h.
typedef FeatureImageType::PixelType itk::LabelMapOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::FeatureImagePixelType |
Definition at line 76 of file itkLabelMapOverlayImageFilter.h.
typedef FeatureImageType::Pointer itk::LabelMapOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::FeatureImagePointer |
Definition at line 73 of file itkLabelMapOverlayImageFilter.h.
typedef FeatureImageType::RegionType itk::LabelMapOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::FeatureImageRegionType |
Definition at line 75 of file itkLabelMapOverlayImageFilter.h.
typedef TFeatureImage itk::LabelMapOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::FeatureImageType |
Definition at line 72 of file itkLabelMapOverlayImageFilter.h.
typedef Functor::LabelOverlayFunctor<FeatureImagePixelType, LabelMapPixelType, OutputImagePixelType> itk::LabelMapOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::FunctorType |
Definition at line 87 of file itkLabelMapOverlayImageFilter.h.
typedef OutputImageType::IndexType itk::LabelMapOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::IndexType |
Definition at line 83 of file itkLabelMapOverlayImageFilter.h.
typedef LabelMapType::ConstPointer itk::LabelMapOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::LabelMapConstPointer |
Definition at line 65 of file itkLabelMapOverlayImageFilter.h.
typedef LabelMapType::PixelType itk::LabelMapOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::LabelMapPixelType |
Definition at line 67 of file itkLabelMapOverlayImageFilter.h.
typedef LabelMapType::Pointer itk::LabelMapOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::LabelMapPointer |
Definition at line 64 of file itkLabelMapOverlayImageFilter.h.
typedef LabelMapType::RegionType itk::LabelMapOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::LabelMapRegionType |
Definition at line 66 of file itkLabelMapOverlayImageFilter.h.
typedef TLabelMap itk::LabelMapOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::LabelMapType |
Some convenient typedefs.
Definition at line 63 of file itkLabelMapOverlayImageFilter.h.
typedef LabelMapType::LabelObjectType itk::LabelMapOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::LabelObjectType |
Reimplemented from itk::LabelMapFilter< TLabelMap, TOutputImage >.
Definition at line 68 of file itkLabelMapOverlayImageFilter.h.
typedef LabelObjectType::LabelType itk::LabelMapOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::LabelType |
Definition at line 69 of file itkLabelMapOverlayImageFilter.h.
typedef LabelObjectType::LengthType itk::LabelMapOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::LengthType |
Definition at line 70 of file itkLabelMapOverlayImageFilter.h.
typedef OutputImageType::ConstPointer itk::LabelMapOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::OutputImageConstPointer |
Reimplemented from itk::LabelMapFilter< TLabelMap, TOutputImage >.
Definition at line 80 of file itkLabelMapOverlayImageFilter.h.
typedef OutputImageType::PixelType itk::LabelMapOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::OutputImagePixelType |
Reimplemented from itk::LabelMapFilter< TLabelMap, TOutputImage >.
Definition at line 82 of file itkLabelMapOverlayImageFilter.h.
typedef OutputImageType::Pointer itk::LabelMapOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::OutputImagePointer |
Reimplemented from itk::LabelMapFilter< TLabelMap, TOutputImage >.
Definition at line 79 of file itkLabelMapOverlayImageFilter.h.
typedef OutputImageType::RegionType itk::LabelMapOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::OutputImageRegionType |
Superclass typedefs.
Reimplemented from itk::LabelMapFilter< TLabelMap, TOutputImage >.
Definition at line 81 of file itkLabelMapOverlayImageFilter.h.
typedef TOutputImage itk::LabelMapOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::OutputImageType |
Some convenient typedefs.
Reimplemented from itk::LabelMapFilter< TLabelMap, TOutputImage >.
Definition at line 78 of file itkLabelMapOverlayImageFilter.h.
typedef SmartPointer<Self> itk::LabelMapOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::Pointer |
Reimplemented from itk::LabelMapFilter< TLabelMap, TOutputImage >.
Definition at line 59 of file itkLabelMapOverlayImageFilter.h.
typedef OutputImageType::RegionType itk::LabelMapOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::RegionType |
Definition at line 85 of file itkLabelMapOverlayImageFilter.h.
typedef LabelMapOverlayImageFilter itk::LabelMapOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::Self |
Standard class typedefs.
Reimplemented from itk::LabelMapFilter< TLabelMap, TOutputImage >.
Definition at line 57 of file itkLabelMapOverlayImageFilter.h.
typedef OutputImageType::SizeType itk::LabelMapOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::SizeType |
Definition at line 84 of file itkLabelMapOverlayImageFilter.h.
typedef LabelMapFilter<TLabelMap, TOutputImage> itk::LabelMapOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::Superclass |
Reimplemented from itk::LabelMapFilter< TLabelMap, TOutputImage >.
Definition at line 58 of file itkLabelMapOverlayImageFilter.h.
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Definition at line 139 of file itkLabelMapOverlayImageFilter.h.
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If an imaging filter needs to perform processing after the buffer has been allocated but before threads are spawned, the filter can can provide an implementation for BeforeThreadedGenerateData(). The execution flow in the default GenerateData() method will be: 1) Allocate the output buffer 2) Call BeforeThreadedGenerateData() 3) Spawn threads, calling ThreadedGenerateData() in each thread. 4) Call AfterThreadedGenerateData() Note that this flow of control is only available if a filter provides a ThreadedGenerateData() method and NOT a GenerateData() method.
Reimplemented from itk::LabelMapFilter< TLabelMap, TOutputImage >.
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Create an object from an instance, potentially deferring to a factory. This method allows you to create an instance of an object that is exactly the same type as the referring object. This is useful in cases where an object has been cast back to a base class.
Reimplemented from itk::LabelMapFilter< TLabelMap, TOutputImage >.
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LabelMapOverlayImageFilter will produce the entire output.
Reimplemented from itk::LabelMapFilter< TLabelMap, TOutputImage >.
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LabelMapOverlayImageFilter needs the entire input be available. Thus, it needs to provide an implementation of GenerateInputRequestedRegion().
Reimplemented from itk::LabelMapFilter< TLabelMap, TOutputImage >.
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Generate the information describing the output data. The default implementation of this method will copy information from the input to the output. A filter may override this method if its output will have different information than its input. For instance, a filter that shrinks an image will need to provide an implementation for this method that changes the spacing of the pixels. Such filters should call their superclass' implementation of this method prior to changing the information values they need (i.e. GenerateOutputInformation() should call Superclass::GenerateOutputInformation() prior to changing the information.
Reimplemented from itk::ProcessObject.
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Get the feature image
Definition at line 113 of file itkLabelMapOverlayImageFilter.h.
References itk::ProcessObject::GetInput().
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Runtime information support.
Reimplemented from itk::LabelMapFilter< TLabelMap, TOutputImage >.
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Set/Get the opacity of the colored label image. The value must be between 0 and 1
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Standard New method.
Reimplemented from itk::LabelMapFilter< TLabelMap, TOutputImage >.
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PushBackInput(), PushFronInput() in the public section force the input to be the type expected by an ImageToImageFilter. However, these methods end of "hiding" the versions from the superclass (ProcessObject) whose arguments are DataObjects. Here, we re-expose the versions from ProcessObject to avoid warnings about hiding methods from the superclass.
Reimplemented from itk::LabelMapFilter< TLabelMap, TOutputImage >.
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Methods invoked by Print() to print information about the object including superclasses. Typically not called by the user (use Print() instead) but used in the hierarchical print process to combine the output of several classes.
Reimplemented from itk::ImageToImageFilter< TLabelMap, TOutputImage >.
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Set the feature image
Definition at line 106 of file itkLabelMapOverlayImageFilter.h.
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Set the input image
Definition at line 119 of file itkLabelMapOverlayImageFilter.h.
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Set the feature image
Definition at line 125 of file itkLabelMapOverlayImageFilter.h.
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Set/Get the opacity of the colored label image. The value must be between 0 and 1
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If an imaging filter can be implemented as a multithreaded algorithm, the filter will provide an implementation of ThreadedGenerateData(). This superclass will automatically split the output image into a number of pieces, spawn multiple threads, and call ThreadedGenerateData() in each thread. Prior to spawning threads, the BeforeThreadedGenerateData() method is called. After all the threads have completed, the AfterThreadedGenerateData() method is called. If an image processing filter cannot support threading, that filter should provide an implementation of the GenerateData() method instead of providing an implementation of ThreadedGenerateData(). If a filter provides a GenerateData() method as its implementation, then the filter is responsible for allocating the output data. If a filter provides a ThreadedGenerateData() method as its implementation, then the output memory will allocated automatically by this superclass. The ThreadedGenerateData() method should only produce the output specified by "outputThreadRegion" parameter. ThreadedGenerateData() cannot write to any other portion of the output image (as this is responsibility of a different thread).
Reimplemented from itk::LabelMapFilter< TLabelMap, TOutputImage >.
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ImageDimension constants
Definition at line 95 of file itkLabelMapOverlayImageFilter.h.
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ImageDimension constants
Reimplemented from itk::LabelMapFilter< TLabelMap, TOutputImage >.
Definition at line 91 of file itkLabelMapOverlayImageFilter.h.
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Definition at line 165 of file itkLabelMapOverlayImageFilter.h.
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Definition at line 164 of file itkLabelMapOverlayImageFilter.h.
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ImageDimension constants
Reimplemented from itk::LabelMapFilter< TLabelMap, TOutputImage >.
Definition at line 93 of file itkLabelMapOverlayImageFilter.h.