#include <itkLabelOverlayImageFilter.h>

Inheritance diagram for itk::LabelOverlayImageFilter< TInputImage, TLabelImage, TOutputImage >:

Collaboration diagram for itk::LabelOverlayImageFilter< TInputImage, TLabelImage, TOutputImage >:

Public Types
typedef OutputPixelType::ComponentType	ComponentType
typedef SmartPointer< const Self >	ConstPointer
typedef TInputImage	InputImageType
typedef TInputImage::PixelType	InputPixelType
typedef TLabelImage	LabelImageType
typedef TLabelImage::PixelType	LabelPixelType
typedef TOutputImage	OutputImageType
typedef TOutputImage::PixelType	OutputPixelType
typedef SmartPointer< Self >	Pointer
typedef LabelOverlayImageFilter	Self
typedef BinaryFunctorImageFilter < TInputImage, TLabelImage, TOutputImage, Functor::LabelOverlayFunctor < typename TInputImage::PixelType, typename TLabelImage::PixelType, typename TOutputImage::PixelType > >	Superclass
Public Types inherited from itk::BinaryFunctorImageFilter< TInputImage, TLabelImage, TOutputImage, Functor::LabelOverlayFunctor< TInputImage::PixelType, TLabelImage::PixelType, TOutputImage::PixelType > >
typedef SimpleDataObjectDecorator < Input1ImagePixelType >	DecoratedInput1ImagePixelType
typedef SimpleDataObjectDecorator < Input2ImagePixelType >	DecoratedInput2ImagePixelType
typedef Functor::LabelOverlayFunctor < TInputImage::PixelType, TLabelImage::PixelType, TOutputImage::PixelType >	FunctorType
typedef Input1ImageType::PixelType	Input1ImagePixelType
typedef Input1ImageType::ConstPointer	Input1ImagePointer
typedef Input1ImageType::RegionType	Input1ImageRegionType
typedef TInputImage	Input1ImageType
typedef Input2ImageType::PixelType	Input2ImagePixelType
typedef Input2ImageType::ConstPointer	Input2ImagePointer
typedef Input2ImageType::RegionType	Input2ImageRegionType
typedef TLabelImage	Input2ImageType
typedef OutputImageType::PixelType	OutputImagePixelType
typedef OutputImageType::Pointer	OutputImagePointer
typedef OutputImageType::RegionType	OutputImageRegionType
Public Types inherited from itk::InPlaceImageFilter< TInputImage, TOutputImage >
typedef InputImageType::ConstPointer	InputImageConstPointer
typedef InputImageType::PixelType	InputImagePixelType
typedef InputImageType::Pointer	InputImagePointer
typedef InputImageType::RegionType	InputImageRegionType
Public Types inherited from itk::ImageToImageFilter< TInputImage, TOutputImage >
Public Types inherited from itk::ImageSource< TOutputImage >
typedef Superclass::DataObjectIdentifierType	DataObjectIdentifierType
typedef DataObject::Pointer	DataObjectPointer
typedef Superclass::DataObjectPointerArraySizeType	DataObjectPointerArraySizeType
Public Types inherited from itk::ProcessObject
typedef std::vector < DataObjectPointer >	DataObjectPointerArray
typedef std::vector < DataObjectIdentifierType >	NameArray
Public Types inherited from itk::Object
Public Types inherited from itk::LightObject

Public Member Functions
void	AddColor (ComponentType r, ComponentType g, ComponentType b)
virtual ::itk::LightObject::Pointer	CreateAnother (void) const
const LabelImageType *	GetLabelImage () const
virtual const char *	GetNameOfClass () const
unsigned int	GetNumberOfColors () const
void	ResetColors ()
void	SetLabelImage (const TLabelImage *input)
	typedef (Concept::HasValueType< OutputPixelType >) OutputPixelShouldHaveValueType
	typedef (Concept::BracketOperator< OutputPixelType, unsigned int, typename OutputPixelType::ValueType >) OutputPixelShouldHaveBracketOperator

virtual void	SetOpacity (double _arg)
virtual const double &	GetOpacity ()

virtual void	SetBackgroundValue (LabelPixelType _arg)
virtual const LabelPixelType &	GetBackgroundValue ()
Public Member Functions inherited from itk::BinaryFunctorImageFilter< TInputImage, TLabelImage, TOutputImage, Functor::LabelOverlayFunctor< TInputImage::PixelType, TLabelImage::PixelType, TOutputImage::PixelType > >
virtual const Input1ImagePixelType &	GetConstant1 () const
virtual const Input2ImagePixelType &	GetConstant2 () const
FunctorType &	GetFunctor ()
const FunctorType &	GetFunctor () const
virtual void	SetConstant1 (const Input1ImagePixelType &input1)
	typedef (Concept::SameDimension< itkGetStaticConstMacro(InputImage1Dimension), itkGetStaticConstMacro(InputImage2Dimension) >) SameDimensionCheck1
	typedef (Concept::SameDimension< itkGetStaticConstMacro(InputImage1Dimension), itkGetStaticConstMacro(OutputImageDimension) >) SameDimensionCheck2
virtual void	SetInput1 (const TInputImage *image1)
virtual void	SetInput1 (const DecoratedInput1ImagePixelType *input1)
virtual void	SetInput1 (const Input1ImagePixelType &input1)
virtual void	SetInput2 (const TLabelImage *image2)
virtual void	SetInput2 (const DecoratedInput2ImagePixelType *input2)
virtual void	SetInput2 (const Input2ImagePixelType &input2)
virtual void	SetConstant2 (const Input2ImagePixelType &input2)
void	SetConstant (Input2ImagePixelType ct)
const Input2ImagePixelType &	GetConstant () const
void	SetFunctor (const FunctorType &functor)
Public Member Functions inherited from itk::InPlaceImageFilter< TInputImage, TOutputImage >
virtual bool	CanRunInPlace () const
virtual void	SetInPlace (bool _arg)
virtual bool	GetInPlace () const
virtual void	InPlaceOn ()
virtual void	InPlaceOff ()
Public Member Functions inherited from itk::ImageToImageFilter< TInputImage, TOutputImage >
const InputImageType *	GetInput (void) const
const InputImageType *	GetInput (unsigned int idx) const
virtual void	PopBackInput ()
virtual void	PopFrontInput ()
virtual void	PushBackInput (const InputImageType *image)
virtual void	PushFrontInput (const InputImageType *image)
virtual void	SetInput (const InputImageType *image)
virtual void	SetInput (unsigned int, const TInputImage *image)
Public Member Functions inherited from itk::ImageSource< TOutputImage >
OutputImageType *	GetOutput (unsigned int idx)
virtual void	GraftNthOutput (unsigned int idx, DataObject *output)
virtual void	GraftOutput (DataObject *output)
virtual void	GraftOutput (const DataObjectIdentifierType &key, DataObject *output)
OutputImageType *	GetOutput (void)
const OutputImageType *	GetOutput (void) const
virtual ProcessObject::DataObjectPointer	MakeOutput (ProcessObject::DataObjectPointerArraySizeType idx)
Public Member Functions inherited from itk::ProcessObject
virtual void	AbortGenerateDataOff ()
virtual void	AbortGenerateDataOn ()
virtual void	EnlargeOutputRequestedRegion (DataObject *)
virtual const bool &	GetAbortGenerateData ()
NameArray	GetInputNames () const
MultiThreader *	GetMultiThreader () const
DataObjectPointerArraySizeType	GetNumberOfIndexedInputs () const
DataObjectPointerArraySizeType	GetNumberOfInputs () const
DataObjectPointerArraySizeType	GetNumberOfOutputs () const
virtual DataObjectPointerArraySizeType	GetNumberOfValidRequiredInputs () const
NameArray	GetOutputNames () const
virtual const float &	GetProgress ()
NameArray	GetRequiredInputNames () const
bool	HasInput (const DataObjectIdentifierType &key) const
bool	HasOutput (const DataObjectIdentifierType &key) const
virtual DataObjectPointer	MakeOutput (const DataObjectIdentifierType &)
virtual void	PrepareOutputs ()
virtual void	PropagateRequestedRegion (DataObject *output)
virtual void	ResetPipeline ()
virtual void	SetAbortGenerateData (bool _arg)
virtual void	SetProgress (float _arg)
virtual void	Update ()
virtual void	UpdateLargestPossibleRegion ()
virtual void	UpdateOutputData (DataObject *output)
virtual void	UpdateOutputInformation ()
void	UpdateProgress (float amount)
DataObjectPointerArray	GetInputs ()
DataObjectPointerArray	GetOutputs ()
DataObjectPointerArray	GetIndexedInputs ()
DataObjectPointerArray	GetIndexedOutputs ()
DataObjectPointerArraySizeType	GetNumberOfIndexedOutputs () const
virtual void	SetReleaseDataFlag (bool flag)
virtual bool	GetReleaseDataFlag () const
void	ReleaseDataFlagOn ()
void	ReleaseDataFlagOff ()
virtual void	SetReleaseDataBeforeUpdateFlag (bool _arg)
virtual const bool &	GetReleaseDataBeforeUpdateFlag ()
virtual void	ReleaseDataBeforeUpdateFlagOn ()
virtual void	ReleaseDataBeforeUpdateFlagOff ()
virtual void	SetNumberOfThreads (ThreadIdType _arg)
virtual const ThreadIdType &	GetNumberOfThreads ()
Public Member Functions inherited from itk::Object
unsigned long	AddObserver (const EventObject &event, Command *)
unsigned long	AddObserver (const EventObject &event, Command *) const
virtual void	DebugOff () const
virtual void	DebugOn () const
Command *	GetCommand (unsigned long tag)
bool	GetDebug () const
MetaDataDictionary &	GetMetaDataDictionary (void)
const MetaDataDictionary &	GetMetaDataDictionary (void) const
virtual unsigned long	GetMTime () const
virtual const TimeStamp &	GetTimeStamp () const
bool	HasObserver (const EventObject &event) const
void	InvokeEvent (const EventObject &)
void	InvokeEvent (const EventObject &) const
virtual void	Modified () const
virtual void	Register () const
void	RemoveAllObservers ()
void	RemoveObserver (unsigned long tag)
void	SetDebug (bool debugFlag) const
void	SetMetaDataDictionary (const MetaDataDictionary &rhs)
virtual void	SetReferenceCount (int)
virtual void	UnRegister () const
Public Member Functions inherited from itk::LightObject
virtual void	Delete ()
virtual int	GetReferenceCount () const
	itkCloneMacro (Self)
void	Print (std::ostream &os, Indent indent=0) const

Static Public Member Functions
static Pointer	New ()

Protected Member Functions
void	BeforeThreadedGenerateData (void)
void	GenerateOutputInformation ()
	LabelOverlayImageFilter ()
void	PrintSelf (std::ostream &os, Indent indent) const
virtual	~LabelOverlayImageFilter ()
Protected Member Functions inherited from itk::BinaryFunctorImageFilter< TInputImage, TLabelImage, TOutputImage, Functor::LabelOverlayFunctor< TInputImage::PixelType, TLabelImage::PixelType, TOutputImage::PixelType > >
	BinaryFunctorImageFilter ()
void	ThreadedGenerateData (const OutputImageRegionType &outputRegionForThread, ThreadIdType threadId)
virtual	~BinaryFunctorImageFilter ()
Protected Member Functions inherited from itk::InPlaceImageFilter< TInputImage, TOutputImage >
virtual void	AllocateOutputs ()
virtual bool	GetRunningInPlace () const
	InPlaceImageFilter ()
virtual void	ReleaseInputs ()
	~InPlaceImageFilter ()
Protected Member Functions inherited from itk::ImageToImageFilter< TInputImage, TOutputImage >
virtual void	CallCopyInputRegionToOutputRegion (OutputImageRegionType &destRegion, const InputImageRegionType &srcRegion)
virtual void	CallCopyOutputRegionToInputRegion (InputImageRegionType &destRegion, const OutputImageRegionType &srcRegion)
virtual void	GenerateInputRequestedRegion ()
	ImageToImageFilter ()
virtual void	VerifyInputInformation ()
	~ImageToImageFilter ()
void	PushBackInput (const DataObject *input)
void	PushFrontInput (const DataObject *input)
Protected Member Functions inherited from itk::ImageSource< TOutputImage >
virtual void	AfterThreadedGenerateData ()
virtual void	GenerateData ()
	ImageSource ()
virtual unsigned int	SplitRequestedRegion (unsigned int i, unsigned int num, OutputImageRegionType &splitRegion)
virtual	~ImageSource ()
Protected Member Functions inherited from itk::ProcessObject
virtual void	AddInput (DataObject *input)
virtual void	AddOutput (DataObject *output)
bool	AddRequiredInputName (const DataObjectIdentifierType &)
virtual void	CacheInputReleaseDataFlags ()
virtual void	GenerateOutputRequestedRegion (DataObject *output)
virtual const DataObjectPointerArraySizeType &	GetNumberOfRequiredInputs ()
virtual const DataObjectPointerArraySizeType &	GetNumberOfRequiredOutputs ()
bool	IsIndexedName (const DataObjectIdentifierType &) const
bool	IsRequiredInputName (const DataObjectIdentifierType &) const
	itkLegacyMacro (virtual void RemoveInput(DataObject *input))
	itkLegacyMacro (virtual void RemoveOutput(DataObject *output))
	itkLegacyMacro (void SetNumberOfInputs(DataObjectPointerArraySizeType num))
	itkLegacyMacro (void SetNumberOfOutputs(DataObjectPointerArraySizeType num))
DataObjectPointerArraySizeType	MakeIndexFromName (const DataObjectIdentifierType &) const
DataObjectIdentifierType	MakeNameFromIndex (DataObjectPointerArraySizeType) const
	ProcessObject ()
virtual void	PropagateResetPipeline ()
virtual void	RemoveInput (const DataObjectIdentifierType &key)
virtual void	RemoveInput (DataObjectPointerArraySizeType)
virtual void	RemoveOutput (const DataObjectIdentifierType &key)
virtual void	RemoveOutput (DataObjectPointerArraySizeType idx)
bool	RemoveRequiredInputName (const DataObjectIdentifierType &)
virtual void	RestoreInputReleaseDataFlags ()
virtual void	SetInput (const DataObjectIdentifierType &key, DataObject *input)
virtual void	SetNthInput (DataObjectPointerArraySizeType num, DataObject *input)
virtual void	SetNthOutput (DataObjectPointerArraySizeType num, DataObject *output)
void	SetNumberOfIndexedInputs (DataObjectPointerArraySizeType num)
void	SetNumberOfIndexedOutputs (DataObjectPointerArraySizeType num)
virtual void	SetNumberOfRequiredInputs (DataObjectPointerArraySizeType)
virtual void	SetNumberOfRequiredOutputs (DataObjectPointerArraySizeType _arg)
virtual void	SetOutput (const DataObjectIdentifierType &key, DataObject *output)
virtual void	SetPrimaryInput (DataObject *input)
virtual void	SetPrimaryOutput (DataObject *output)
void	SetRequiredInputNames (const NameArray &)
virtual void	VerifyPreconditions ()
	~ProcessObject ()
DataObject *	GetInput (const DataObjectIdentifierType &key)
const DataObject *	GetInput (const DataObjectIdentifierType &key) const
DataObject *	GetInput (DataObjectPointerArraySizeType)
const DataObject *	GetInput (DataObjectPointerArraySizeType idx) const
DataObject *	GetPrimaryInput ()
const DataObject *	GetPrimaryInput () const
DataObject *	GetOutput (const DataObjectIdentifierType &key)
const DataObject *	GetOutput (const DataObjectIdentifierType &key) const
DataObject *	GetOutput (DataObjectPointerArraySizeType idx)
const DataObject *	GetOutput (DataObjectPointerArraySizeType idx) const
DataObject *	GetPrimaryOutput ()
const DataObject *	GetPrimaryOutput () const
Protected Member Functions inherited from itk::Object
	Object ()
bool	PrintObservers (std::ostream &os, Indent indent) const
virtual void	SetTimeStamp (const TimeStamp &time)
virtual	~Object ()
Protected Member Functions inherited from itk::LightObject
virtual LightObject::Pointer	InternalClone () const
	LightObject ()
virtual void	PrintHeader (std::ostream &os, Indent indent) const
virtual void	PrintTrailer (std::ostream &os, Indent indent) const
virtual	~LightObject ()

Private Member Functions
	LabelOverlayImageFilter (const Self &)
void	operator= (const Self &)

Private Attributes
LabelPixelType	m_BackgroundValue
double	m_Opacity

Additional Inherited Members
Static Public Attributes inherited from itk::BinaryFunctorImageFilter< TInputImage, TLabelImage, TOutputImage, Functor::LabelOverlayFunctor< TInputImage::PixelType, TLabelImage::PixelType, TOutputImage::PixelType > >
static const unsigned int	InputImage1Dimension
static const unsigned int	InputImage2Dimension
static const unsigned int	OutputImageDimension
Static Public Attributes inherited from itk::InPlaceImageFilter< TInputImage, TOutputImage >
static const unsigned int	InputImageDimension = TInputImage::ImageDimension
Static Public Attributes inherited from itk::ImageToImageFilter< TInputImage, TOutputImage >
Static Public Attributes inherited from itk::ImageSource< TOutputImage >

Detailed Description

template<typename TInputImage, class TLabelImage, typename TOutputImage>
class itk::LabelOverlayImageFilter< TInputImage, TLabelImage, TOutputImage >

Apply a colormap to a label image and put it on top of the input image.

Apply a colormap to a label image and put it on top of the input image. The set of colors is a good selection of distinct colors. The opacity of the label image can be defined by the user. The user can also choose if the want to use a background and which label value is the background. A background label produce a gray pixel with the same intensity than the input one.

Author:: Gaetan Lehmann. Biologie du Developpement et de la Reproduction, INRA de Jouy-en-Josas, France.

This class was contributed to the Insight Journal http://hdl.handle.net/1926/172

See also:: ScalarToRGBPixelFunctor LabelToRGBImageFilter

Wiki Examples:

All Examples

Overlay a LabelMap on an image

Definition at line 54 of file itkLabelOverlayImageFilter.h.