#include <itkLevelSetNeighborhoodExtractor.h>

Inheritance diagram for itk::LevelSetNeighborhoodExtractor< TLevelSet >:

Collaboration diagram for itk::LevelSetNeighborhoodExtractor< TLevelSet >:

Public Types
typedef SmartPointer< const Self >	ConstPointer
typedef Index < itkGetStaticConstMacro(SetDimension) >	IndexType
typedef LevelSetType::LevelSetConstPointer	LevelSetConstPointer
typedef LevelSetType::LevelSetImageType	LevelSetImageType
typedef LevelSetType::LevelSetPointer	LevelSetPointer
typedef LevelSetTypeDefault < TLevelSet >	LevelSetType
typedef LevelSetType::NodeContainer	NodeContainer
typedef LevelSetType::NodeContainerPointer	NodeContainerPointer
typedef LevelSetType::NodeType	NodeType
typedef LevelSetType::PixelType	PixelType
typedef SmartPointer< Self >	Pointer
typedef LevelSetNeighborhoodExtractor	Self
typedef LightProcessObject	Superclass
Public Types inherited from itk::LightProcessObject
Public Types inherited from itk::Object
Public Types inherited from itk::LightObject

Public Member Functions
virtual ::itk::LightObject::Pointer	CreateAnother (void) const
virtual const LevelSetImageType *	GetInputLevelSet ()
virtual NodeContainer *	GetInputNarrowBand ()
NodeContainerPointer	GetInsidePoints ()
virtual double	GetLevelSetValue () const
virtual const char *	GetNameOfClass () const
virtual double	GetNarrowBandwidth () const
NodeContainerPointer	GetOutsidePoints (void)
void	Locate ()
virtual void	SetInputLevelSet (const LevelSetImageType *_arg)
void	SetInputNarrowBand (NodeContainer *ptr)
virtual void	SetLevelSetValue (double _arg)
virtual void	SetNarrowBanding (bool _arg)
virtual void	SetNarrowBandwidth (double _arg)

virtual bool	GetNarrowBanding () const
virtual void	NarrowBandingOn ()
virtual void	NarrowBandingOff ()
Public Member Functions inherited from itk::LightProcessObject
virtual void	AbortGenerateDataOff ()
virtual void	AbortGenerateDataOn ()
virtual const bool &	GetAbortGenerateData ()
virtual void	SetAbortGenerateData (bool _arg)
virtual void	UpdateOutputData ()
void	UpdateProgress (float amount)
virtual void	SetProgress (float _arg)
virtual const float &	GetProgress ()
Public Member Functions inherited from itk::Object
unsigned long	AddObserver (const EventObject &event, Command *)
unsigned long	AddObserver (const EventObject &event, Command *) const
virtual void	DebugOff () const
virtual void	DebugOn () const
Command *	GetCommand (unsigned long tag)
bool	GetDebug () const
MetaDataDictionary &	GetMetaDataDictionary (void)
const MetaDataDictionary &	GetMetaDataDictionary (void) const
virtual unsigned long	GetMTime () const
virtual const TimeStamp &	GetTimeStamp () const
bool	HasObserver (const EventObject &event) const
void	InvokeEvent (const EventObject &)
void	InvokeEvent (const EventObject &) const
virtual void	Modified () const
virtual void	Register () const
void	RemoveAllObservers ()
void	RemoveObserver (unsigned long tag)
void	SetDebug (bool debugFlag) const
void	SetMetaDataDictionary (const MetaDataDictionary &rhs)
virtual void	SetReferenceCount (int)
virtual void	UnRegister () const
Public Member Functions inherited from itk::LightObject
virtual void	Delete ()
virtual int	GetReferenceCount () const
	itkCloneMacro (Self)
void	Print (std::ostream &os, Indent indent=0) const

Static Public Member Functions
static Pointer	New ()

Static Public Attributes
static const unsigned int	SetDimension = LevelSetType::SetDimension

Protected Member Functions
virtual double	CalculateDistance (IndexType &index)
void	GenerateData ()
LevelSetImageType::PixelType	GetLargeValue () const
bool	GetLastPointIsInside () const
const NodeType &	GetNodeUsedInCalculation (unsigned int idx) const
virtual void	Initialize ()
	LevelSetNeighborhoodExtractor ()
void	PrintSelf (std::ostream &os, Indent indent) const
	~LevelSetNeighborhoodExtractor ()
Protected Member Functions inherited from itk::LightProcessObject
	LightProcessObject ()
	~LightProcessObject ()
Protected Member Functions inherited from itk::Object
	Object ()
bool	PrintObservers (std::ostream &os, Indent indent) const
virtual void	SetTimeStamp (const TimeStamp &time)
virtual	~Object ()
Protected Member Functions inherited from itk::LightObject
virtual LightObject::Pointer	InternalClone () const
	LightObject ()
virtual void	PrintHeader (std::ostream &os, Indent indent) const
virtual void	PrintTrailer (std::ostream &os, Indent indent) const
virtual	~LightObject ()

Private Member Functions
void	GenerateDataFull ()
void	GenerateDataNarrowBand ()
	LevelSetNeighborhoodExtractor (const Self &)
void	operator= (const Self &)

Private Attributes
SizeValueType	m_ImageSize [SetDimension]
LevelSetConstPointer	m_InputLevelSet
NodeContainerPointer	m_InputNarrowBand
NodeContainerPointer	m_InsidePoints
LevelSetImageType::PixelType	m_LargeValue
bool	m_LastPointIsInside
double	m_LevelSetValue
bool	m_NarrowBanding
double	m_NarrowBandwidth
std::vector< NodeType >	m_NodesUsed
NodeContainerPointer	m_OutsidePoints

Detailed Description

template<class TLevelSet>
class itk::LevelSetNeighborhoodExtractor< TLevelSet >

Locate pixels of a particular level set.

LevelSetNeighborhoodExtractor locates a particular level set in the input level set. Specifically, the method Locate() fills two containers: one containing pixels immediately inside the contour defined by the level set and the other containing pixels immediately outside. For each located pixel, an estimated distance to the particular level set is also calculated.

The containers InsidePoints and OutsidePoints can then be used in FastMarchingImageFilter to produce a signed distance map from the specified level set.

This class is templated over the image type representing the level set.

This class supports narrowbanding. If a input narrowband is provided, the alogrithm will only search pixels within the narrowband.

Implemenation of this class is based on Chapter 11 of "Level Set Methods and Fast Marching Methods", J.A. Sethian, Cambridge Press, Second edition, 1999.

Definition at line 57 of file itkLevelSetNeighborhoodExtractor.h.

Member Typedef Documentation

template<class TLevelSet >

typedef SmartPointer< const Self > itk::LevelSetNeighborhoodExtractor< TLevelSet >::ConstPointer

Reimplemented from itk::LightProcessObject.

Reimplemented in itk::LevelSetVelocityNeighborhoodExtractor< TLevelSet, TAuxValue, VAuxDimension >.

Definition at line 65 of file itkLevelSetNeighborhoodExtractor.h.

template<class TLevelSet >

typedef Index< itkGetStaticConstMacro(SetDimension) > itk::LevelSetNeighborhoodExtractor< TLevelSet >::IndexType

Index typedef support.

Definition at line 88 of file itkLevelSetNeighborhoodExtractor.h.

template<class TLevelSet >

typedef LevelSetType::LevelSetConstPointer itk::LevelSetNeighborhoodExtractor< TLevelSet >::LevelSetConstPointer

Definition at line 77 of file itkLevelSetNeighborhoodExtractor.h.

template<class TLevelSet >

typedef LevelSetType::LevelSetImageType itk::LevelSetNeighborhoodExtractor< TLevelSet >::LevelSetImageType

Definition at line 75 of file itkLevelSetNeighborhoodExtractor.h.

template<class TLevelSet >

typedef LevelSetType::LevelSetPointer itk::LevelSetNeighborhoodExtractor< TLevelSet >::LevelSetPointer

Definition at line 76 of file itkLevelSetNeighborhoodExtractor.h.

template<class TLevelSet >

typedef LevelSetTypeDefault< TLevelSet > itk::LevelSetNeighborhoodExtractor< TLevelSet >::LevelSetType

LevelSetType typedef support.

Reimplemented in itk::LevelSetVelocityNeighborhoodExtractor< TLevelSet, TAuxValue, VAuxDimension >.

Definition at line 71 of file itkLevelSetNeighborhoodExtractor.h.

template<class TLevelSet >

typedef LevelSetType::NodeContainer itk::LevelSetNeighborhoodExtractor< TLevelSet >::NodeContainer

Definition at line 80 of file itkLevelSetNeighborhoodExtractor.h.

template<class TLevelSet >

typedef LevelSetType::NodeContainerPointer itk::LevelSetNeighborhoodExtractor< TLevelSet >::NodeContainerPointer

Definition at line 81 of file itkLevelSetNeighborhoodExtractor.h.

template<class TLevelSet >

typedef LevelSetType::NodeType itk::LevelSetNeighborhoodExtractor< TLevelSet >::NodeType

Definition at line 79 of file itkLevelSetNeighborhoodExtractor.h.

template<class TLevelSet >

typedef LevelSetType::PixelType itk::LevelSetNeighborhoodExtractor< TLevelSet >::PixelType

Definition at line 78 of file itkLevelSetNeighborhoodExtractor.h.

template<class TLevelSet >

typedef SmartPointer< Self > itk::LevelSetNeighborhoodExtractor< TLevelSet >::Pointer

Reimplemented from itk::LightProcessObject.

Reimplemented in itk::LevelSetVelocityNeighborhoodExtractor< TLevelSet, TAuxValue, VAuxDimension >.

Definition at line 64 of file itkLevelSetNeighborhoodExtractor.h.

template<class TLevelSet >

typedef LevelSetNeighborhoodExtractor itk::LevelSetNeighborhoodExtractor< TLevelSet >::Self

Standard class typdedefs.

Reimplemented from itk::LightProcessObject.

Reimplemented in itk::LevelSetVelocityNeighborhoodExtractor< TLevelSet, TAuxValue, VAuxDimension >.

Definition at line 62 of file itkLevelSetNeighborhoodExtractor.h.

template<class TLevelSet >

typedef LightProcessObject itk::LevelSetNeighborhoodExtractor< TLevelSet >::Superclass

Reimplemented from itk::LightProcessObject.

Reimplemented in itk::LevelSetVelocityNeighborhoodExtractor< TLevelSet, TAuxValue, VAuxDimension >.

Definition at line 63 of file itkLevelSetNeighborhoodExtractor.h.

Constructor & Destructor Documentation

template<class TLevelSet >

itk::LevelSetNeighborhoodExtractor< TLevelSet >::LevelSetNeighborhoodExtractor ( )

protected

template<class TLevelSet >

itk::LevelSetNeighborhoodExtractor< TLevelSet >::~LevelSetNeighborhoodExtractor ( )

inlineprotected

Definition at line 139 of file itkLevelSetNeighborhoodExtractor.h.

template<class TLevelSet >

itk::LevelSetNeighborhoodExtractor< TLevelSet >::LevelSetNeighborhoodExtractor ( const Self & )

private

Member Function Documentation

template<class TLevelSet >

virtual double itk::LevelSetNeighborhoodExtractor< TLevelSet >::CalculateDistance ( IndexType & index )

protectedvirtual

template<class TLevelSet >

virtual::itk::LightObject::Pointer itk::LevelSetNeighborhoodExtractor< TLevelSet >::CreateAnother ( void ) const

virtual

Create an object from an instance, potentially deferring to a factory. This method allows you to create an instance of an object that is exactly the same type as the referring object. This is useful in cases where an object has been cast back to a base class.

Reimplemented from itk::LightProcessObject.

Reimplemented in itk::LevelSetVelocityNeighborhoodExtractor< TLevelSet, TAuxValue, VAuxDimension >.

template<class TLevelSet >

void itk::LevelSetNeighborhoodExtractor< TLevelSet >::GenerateData ( void )

protectedvirtual

This method causes the filter to generate its output.

Reimplemented from itk::LightProcessObject.

template<class TLevelSet >

void itk::LevelSetNeighborhoodExtractor< TLevelSet >::GenerateDataFull ( )

private

template<class TLevelSet >

void itk::LevelSetNeighborhoodExtractor< TLevelSet >::GenerateDataNarrowBand ( )

private

template<class TLevelSet >

virtual const LevelSetImageType* itk::LevelSetNeighborhoodExtractor< TLevelSet >::GetInputLevelSet ( )

virtual

Get the input level set.

template<class TLevelSet >

virtual NodeContainer* itk::LevelSetNeighborhoodExtractor< TLevelSet >::GetInputNarrowBand ( )

virtual

template<class TLevelSet >

NodeContainerPointer itk::LevelSetNeighborhoodExtractor< TLevelSet >::GetInsidePoints ( )

inline

Get the container of inside points. The inside points are stored in a VectorContainer of LevelSetNodes.

Definition at line 125 of file itkLevelSetNeighborhoodExtractor.h.

template<class TLevelSet >

LevelSetImageType::PixelType itk::LevelSetNeighborhoodExtractor< TLevelSet >::GetLargeValue ( ) const

inlineprotected

Definition at line 142 of file itkLevelSetNeighborhoodExtractor.h.

template<class TLevelSet >

bool itk::LevelSetNeighborhoodExtractor< TLevelSet >::GetLastPointIsInside ( ) const

inlineprotected

Definition at line 154 of file itkLevelSetNeighborhoodExtractor.h.

template<class TLevelSet >

virtual double itk::LevelSetNeighborhoodExtractor< TLevelSet >::GetLevelSetValue ( ) const

virtual

Get the value of the level set to be located.

template<class TLevelSet >

virtual const char* itk::LevelSetNeighborhoodExtractor< TLevelSet >::GetNameOfClass ( ) const

virtual

Run-time type information (and related methods).

Reimplemented from itk::LightProcessObject.

Reimplemented in itk::LevelSetVelocityNeighborhoodExtractor< TLevelSet, TAuxValue, VAuxDimension >.

template<class TLevelSet >

virtual bool itk::LevelSetNeighborhoodExtractor< TLevelSet >::GetNarrowBanding ( ) const

virtual

Get the narrowbanding flag.

template<class TLevelSet >

virtual double itk::LevelSetNeighborhoodExtractor< TLevelSet >::GetNarrowBandwidth ( ) const

virtual

Get the narrow band width.

template<class TLevelSet >

const NodeType& itk::LevelSetNeighborhoodExtractor< TLevelSet >::GetNodeUsedInCalculation ( unsigned int idx ) const

inlineprotected

Definition at line 145 of file itkLevelSetNeighborhoodExtractor.h.

template<class TLevelSet >

NodeContainerPointer itk::LevelSetNeighborhoodExtractor< TLevelSet >::GetOutsidePoints ( void )

inline

Get the container of outside points. The outside points are stored in a VectorContainer of LevelSetNodes.

Definition at line 130 of file itkLevelSetNeighborhoodExtractor.h.

template<class TLevelSet >

virtual void itk::LevelSetNeighborhoodExtractor< TLevelSet >::Initialize ( )

protectedvirtual

Reimplemented in itk::LevelSetVelocityNeighborhoodExtractor< TLevelSet, TAuxValue, VAuxDimension >.

template<class TLevelSet >

void itk::LevelSetNeighborhoodExtractor< TLevelSet >::Locate ( )

Locate the level set. This method evokes the level set location algorithm.

template<class TLevelSet >

virtual void itk::LevelSetNeighborhoodExtractor< TLevelSet >::NarrowBandingOff ( )

virtual

Get the narrowbanding flag.

template<class TLevelSet >

virtual void itk::LevelSetNeighborhoodExtractor< TLevelSet >::NarrowBandingOn ( )

virtual

Get the narrowbanding flag.

template<class TLevelSet >

static Pointer itk::LevelSetNeighborhoodExtractor< TLevelSet >::New ( )

static

Method for creation through the object factory.

Reimplemented from itk::LightProcessObject.

Reimplemented in itk::LevelSetVelocityNeighborhoodExtractor< TLevelSet, TAuxValue, VAuxDimension >.

template<class TLevelSet >

void itk::LevelSetNeighborhoodExtractor< TLevelSet >::operator= ( const Self & )

private

This method causes the filter to generate its output.

Reimplemented from itk::LightProcessObject.

Reimplemented in itk::LevelSetVelocityNeighborhoodExtractor< TLevelSet, TAuxValue, VAuxDimension >.

template<class TLevelSet >

void itk::LevelSetNeighborhoodExtractor< TLevelSet >::PrintSelf	(	std::ostream &	os,
		Indent	indent
	)		const

protectedvirtual

Methods invoked by Print() to print information about the object including superclasses. Typically not called by the user (use Print() instead) but used in the hierarchical print process to combine the output of several classes.

Reimplemented from itk::LightProcessObject.

Reimplemented in itk::LevelSetVelocityNeighborhoodExtractor< TLevelSet, TAuxValue, VAuxDimension >.

template<class TLevelSet >

virtual void itk::LevelSetNeighborhoodExtractor< TLevelSet >::SetInputLevelSet ( const LevelSetImageType * _arg )

virtual

Set the input level set.

template<class TLevelSet >

void itk::LevelSetNeighborhoodExtractor< TLevelSet >::SetInputNarrowBand ( NodeContainer * ptr )

Set/Get the input narrowband. A narrowband is represented as a VectorContainer of LevelSetNodes.

template<class TLevelSet >

virtual void itk::LevelSetNeighborhoodExtractor< TLevelSet >::SetLevelSetValue ( double _arg )

virtual