ITK  4.2.0
Insight Segmentation and Registration Toolkit
Public Types | Public Member Functions | Static Public Member Functions | Static Public Attributes | Protected Member Functions | Protected Attributes
itk::ScalarChanAndVeseSparseLevelSetImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TSharedData, TIdCell > Class Template Reference

#include <itkScalarChanAndVeseSparseLevelSetImageFilter.h>

+ Inheritance diagram for itk::ScalarChanAndVeseSparseLevelSetImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TSharedData, TIdCell >:
+ Collaboration diagram for itk::ScalarChanAndVeseSparseLevelSetImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TSharedData, TIdCell >:

List of all members.

Public Types

typedef SmartPointer< const SelfConstPointer
typedef FeatureImageType::Pointer FeatureImagePointer
typedef TFeatureImage FeatureImageType
typedef FeatureImageType::IndexType FeatureIndexType
typedef
FeatureIndexType::IndexValueType 
FeatureIndexValueType
typedef FeatureImageType::PixelType FeaturePixelType
typedef
FeatureImageType::RegionType 
FeatureRegionType
typedef
Superclass::FiniteDifferenceFunctionType 
FiniteDifferenceFunctionType
typedef FunctionType::Pointer FunctionPtr
typedef TFunction FunctionType
typedef Superclass::IdCellType IdCellType
typedef OutputImageType::IndexType IndexType
typedef
Superclass::InputImagePointer 
InputImagePointer
typedef Superclass::InputImageType InputImageType
typedef Superclass::InputPointType InputPointType
typedef
Superclass::InputSpacingType 
InputSpacingType
typedef TOutputImage OutputImageType
typedef OutputImageType::PixelType OutputPixelType
typedef SmartPointer< SelfPointer
typedef ROIFilterType::Pointer ROIFilterPointer
typedef
RegionOfInterestImageFilter
< FeatureImageType,
FeatureImageType
ROIFilterType
typedef
ScalarChanAndVeseSparseLevelSetImageFilter 
Self
typedef SharedDataType::Pointer SharedDataPointer
typedef TSharedData SharedDataType
typedef
MultiphaseSparseFiniteDifferenceImageFilter
< TInputImage, TFeatureImage,
TOutputImage, TFunction,
TIdCell > 
Superclass
typedef Superclass::TimeStepType TimeStepType
typedef Superclass::ValueType ValueType
- Public Types inherited from itk::MultiphaseSparseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TIdCell >
typedef
NeighborhoodAlgorithm::ImageBoundaryFacesCalculator
< StatusImageType
BFCType
typedef
Superclass::FeaturePointType 
FeaturePointType
typedef Superclass::FeatureSizeType FeatureSizeType
typedef
Superclass::FeatureSpacingType 
FeatureSpacingType
typedef
FiniteDifferenceFunctionType::FloatOffsetType 
FiniteDifferenceFunctionFloatOffsetType
typedef
Superclass::FiniteDifferenceFunctionPointer 
FiniteDifferenceFunctionPointer
typedef Superclass::InputIndexType InputIndexType
typedef
Superclass::InputIndexValueType 
InputIndexValueType
typedef
Superclass::InputOffsetValueType 
InputOffsetValueType
typedef Superclass::InputPixelType InputPixelType
typedef Superclass::InputRegionType InputRegionType
typedef Superclass::InputSizeType InputSizeType
typedef
Superclass::InputSizeValueType 
InputSizeValueType
typedef LayerType::ConstIterator LayerConstIterator
typedef LayerType::Iterator LayerIterator
typedef
LayerListType::const_iterator 
LayerListConstIterator
typedef LayerListType::iterator LayerListIterator
typedef std::vector
< LayerPointerType
LayerListType
typedef
LayerNodeStorageType::Pointer 
LayerNodeStoragePointer
typedef ObjectStore
< LayerNodeType
LayerNodeStorageType
typedef
SparseFieldLevelSetNode
< OutputIndexType
LayerNodeType
typedef LayerType::Pointer LayerPointerType
typedef SparseFieldLayer
< LayerNodeType
LayerType
typedef
SparseFieldCityBlockNeighborList
< NeighborhoodIterator
< OutputImageType > > 
NeighborListType
typedef
NeighborListType::OffsetType 
OffsetType
typedef
Superclass::OutputImagePointer 
OutputImagePointer
typedef Superclass::OutputIndexType OutputIndexType
typedef
Superclass::OutputIndexValueType 
OutputIndexValueType
typedef
Superclass::OutputRegionType 
OutputRegionType
typedef Superclass::OutputSizeType OutputSizeType
typedef StatusImageType::Pointer StatusImagePointer
typedef Image< StatusType,
itkGetStaticConstMacro(ImageDimension) > 
StatusImageType
typedef signed char StatusType
typedef
UpdateBufferType::const_iterator 
UpdateBufferConstIterator
typedef std::vector< ValueTypeUpdateBufferType
typedef
ZeroCrossingFilterType::Pointer 
ZeroCrossingFilterPointer
typedef
ZeroCrossingImageFilter
< InputImageType,
InputImageType
ZeroCrossingFilterType
- Public Types inherited from itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TIdCell >
typedef Vector< float,
itkGetStaticConstMacro(ImageDimension) > 
CentroidVectorType
typedef
InputPointType::CoordRepType 
InputCoordRepType
typedef
KdTreeGeneratorType::Pointer 
KdTreeGeneratorPointer
typedef
Statistics::KdTreeGenerator
< SampleType
KdTreeGeneratorType
typedef KdTreeType::Pointer KdTreePointer
typedef
KdTreeGeneratorType::KdTreeType 
KdTreeType
typedef
OutputImageType::SizeValueType 
OutputSizeValueType
typedef
FiniteDifferenceFunctionType::RadiusType 
RadiusType
typedef Statistics::ListSample
< CentroidVectorType
SampleType
typedef std::vector< TimeStepTypeTimeStepVectorType
typedef std::vector< IdCellTypeVectorIdCellType
- Public Types inherited from itk::InPlaceImageFilter< TFeatureImage, TOutputImage >
typedef
InputImageType::ConstPointer 
InputImageConstPointer
typedef InputImageType::PixelType InputImagePixelType
typedef InputImageType::RegionType InputImageRegionType
typedef
Superclass::OutputImagePixelType 
OutputImagePixelType
typedef
Superclass::OutputImageRegionType 
OutputImageRegionType
- Public Types inherited from itk::ImageToImageFilter< TFeatureImage, TOutputImage >
- Public Types inherited from itk::ImageSource< TOutputImage >
typedef
Superclass::DataObjectIdentifierType 
DataObjectIdentifierType
typedef DataObject::Pointer DataObjectPointer
typedef
Superclass::DataObjectPointerArraySizeType 
DataObjectPointerArraySizeType
- Public Types inherited from itk::ProcessObject
typedef std::vector
< DataObjectPointer
DataObjectPointerArray
typedef std::vector
< DataObjectIdentifierType
NameArray
- Public Types inherited from itk::Object
- Public Types inherited from itk::LightObject

Public Member Functions

virtual ::itk::LightObject::Pointer CreateAnother (void) const
virtual const char * GetNameOfClass () const
virtual void SetFeatureImage (const FeatureImagePointer f)
 typedef (Concept::HasNumericTraits< OutputPixelType >) OutputHasNumericTraitsCheck
- Public Member Functions inherited from itk::MultiphaseSparseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TIdCell >
void SetFunctionCount (const IdCellType &n)
 typedef (Concept::EqualityComparable< typename TOutputImage::PixelType >) OutputEqualityComparableCheck
 typedef (Concept::Convertible< double, typename TOutputImage::PixelType >) DoubleConvertibleToOutputCheck
 typedef (Concept::OStreamWritable< typename TOutputImage::PixelType >) OutputOStreamWritableCheck
virtual void SetNumberOfLayers (unsigned int _arg)
virtual unsigned int GetNumberOfLayers () const
virtual void SetIsoSurfaceValue (ValueType _arg)
virtual ValueType GetIsoSurfaceValue () const
virtual void SetInterpolateSurfaceLocation (bool _arg)
virtual bool GetInterpolateSurfaceLocation () const
void InterpolateSurfaceLocationOn ()
void InterpolateSurfaceLocationOff ()
- Public Member Functions inherited from itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TIdCell >
virtual const unsigned int & GetElapsedIterations ()
InputImagePointer GetLevelSet (const IdCellType &i)
virtual void SetElapsedIterations (unsigned int _arg)
void SetFunctionCount (const IdCellType &n)
void SetKdTree (KdTreeType *kdtree)
void SetLevelSet (const IdCellType &i, const InputImageType *levelSet)
void SetLookup (VectorIdCellType lookup)
virtual const
FiniteDifferenceFunctionPointer 
GetDifferenceFunction (const IdCellType &functionIndex) const
virtual void SetDifferenceFunction (const IdCellType &functionIndex, FiniteDifferenceFunctionPointer function)
virtual void SetNumberOfIterations (unsigned int _arg)
virtual const unsigned int & GetNumberOfIterations ()
virtual void SetUseImageSpacing (bool _arg)
virtual void UseImageSpacingOn ()
virtual void UseImageSpacingOff ()
virtual const bool & GetUseImageSpacing ()
virtual void SetMaximumRMSError (double _arg)
virtual const double & GetMaximumRMSError ()
virtual void SetRMSChange (double _arg)
virtual const double & GetRMSChange ()
virtual void SetInitializedState (bool _arg)
virtual const bool & GetInitializedState ()
virtual void InitializedStateOn ()
virtual void InitializedStateOff ()
virtual void SetManualReinitialization (bool _arg)
virtual const bool & GetManualReinitialization ()
virtual void ManualReinitializationOn ()
virtual void ManualReinitializationOff ()
- Public Member Functions inherited from itk::InPlaceImageFilter< TFeatureImage, TOutputImage >
virtual bool CanRunInPlace () const
virtual void SetInPlace (bool _arg)
virtual bool GetInPlace () const
virtual void InPlaceOn ()
virtual void InPlaceOff ()
- Public Member Functions inherited from itk::ImageToImageFilter< TFeatureImage, TOutputImage >
const InputImageTypeGetInput (void) const
const InputImageTypeGetInput (unsigned int idx) const
virtual void PopBackInput ()
virtual void PopFrontInput ()
virtual void PushBackInput (const InputImageType *image)
virtual void PushFrontInput (const InputImageType *image)
virtual void SetInput (const InputImageType *image)
virtual void SetInput (unsigned int, const TFeatureImage *image)
- Public Member Functions inherited from itk::ImageSource< TOutputImage >
OutputImageTypeGetOutput (unsigned int idx)
virtual void GraftNthOutput (unsigned int idx, DataObject *output)
virtual void GraftOutput (DataObject *output)
virtual void GraftOutput (const DataObjectIdentifierType &key, DataObject *output)
OutputImageTypeGetOutput (void)
const OutputImageTypeGetOutput (void) const
virtual
ProcessObject::DataObjectPointer 
MakeOutput (ProcessObject::DataObjectPointerArraySizeType idx)
- Public Member Functions inherited from itk::ProcessObject
virtual void AbortGenerateDataOff ()
virtual void AbortGenerateDataOn ()
virtual void EnlargeOutputRequestedRegion (DataObject *)
virtual const bool & GetAbortGenerateData ()
NameArray GetInputNames () const
MultiThreader * GetMultiThreader () const
DataObjectPointerArraySizeType GetNumberOfIndexedInputs () const
DataObjectPointerArraySizeType GetNumberOfInputs () const
DataObjectPointerArraySizeType GetNumberOfOutputs () const
virtual
DataObjectPointerArraySizeType 
GetNumberOfValidRequiredInputs () const
NameArray GetOutputNames () const
virtual const float & GetProgress ()
NameArray GetRequiredInputNames () const
bool HasInput (const DataObjectIdentifierType &key) const
bool HasOutput (const DataObjectIdentifierType &key) const
virtual DataObjectPointer MakeOutput (const DataObjectIdentifierType &)
virtual void PrepareOutputs ()
virtual void PropagateRequestedRegion (DataObject *output)
virtual void ResetPipeline ()
virtual void SetAbortGenerateData (bool _arg)
virtual void SetProgress (float _arg)
virtual void Update ()
virtual void UpdateLargestPossibleRegion ()
virtual void UpdateOutputData (DataObject *output)
virtual void UpdateOutputInformation ()
void UpdateProgress (float amount)
DataObjectPointerArray GetInputs ()
DataObjectPointerArray GetOutputs ()
DataObjectPointerArray GetIndexedInputs ()
DataObjectPointerArray GetIndexedOutputs ()
DataObjectPointerArraySizeType GetNumberOfIndexedOutputs () const
virtual void SetReleaseDataFlag (bool flag)
virtual bool GetReleaseDataFlag () const
void ReleaseDataFlagOn ()
void ReleaseDataFlagOff ()
virtual void SetReleaseDataBeforeUpdateFlag (bool _arg)
virtual const bool & GetReleaseDataBeforeUpdateFlag ()
virtual void ReleaseDataBeforeUpdateFlagOn ()
virtual void ReleaseDataBeforeUpdateFlagOff ()
virtual void SetNumberOfThreads (ThreadIdType _arg)
virtual const ThreadIdTypeGetNumberOfThreads ()
- Public Member Functions inherited from itk::Object
unsigned long AddObserver (const EventObject &event, Command *)
unsigned long AddObserver (const EventObject &event, Command *) const
virtual void DebugOff () const
virtual void DebugOn () const
CommandGetCommand (unsigned long tag)
bool GetDebug () const
MetaDataDictionaryGetMetaDataDictionary (void)
const MetaDataDictionaryGetMetaDataDictionary (void) const
virtual unsigned long GetMTime () const
virtual const TimeStampGetTimeStamp () const
bool HasObserver (const EventObject &event) const
void InvokeEvent (const EventObject &)
void InvokeEvent (const EventObject &) const
virtual void Modified () const
virtual void Register () const
void RemoveAllObservers ()
void RemoveObserver (unsigned long tag)
void SetDebug (bool debugFlag) const
void SetMetaDataDictionary (const MetaDataDictionary &rhs)
virtual void SetReferenceCount (int)
virtual void UnRegister () const
- Public Member Functions inherited from itk::LightObject
virtual void Delete ()
virtual int GetReferenceCount () const
 itkCloneMacro (Self)
void Print (std::ostream &os, Indent indent=0) const

Static Public Member Functions

static Pointer New ()

Static Public Attributes

static const unsigned int ImageDimension = TInputImage::ImageDimension
- Static Public Attributes inherited from itk::MultiphaseSparseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TIdCell >
- Static Public Attributes inherited from itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TIdCell >
- Static Public Attributes inherited from itk::InPlaceImageFilter< TFeatureImage, TOutputImage >
static const unsigned int InputImageDimension
static const unsigned int OutputImageDimension
- Static Public Attributes inherited from itk::ImageToImageFilter< TFeatureImage, TOutputImage >
- Static Public Attributes inherited from itk::ImageSource< TOutputImage >

Protected Member Functions

virtual void Initialize ()
virtual void InitializeIteration ()
 ScalarChanAndVeseSparseLevelSetImageFilter ()
virtual void UpdatePixel (unsigned int functionIndex, unsigned int idx, NeighborhoodIterator< InputImageType > &iterator, ValueType &newValue, bool &status)
 ~ScalarChanAndVeseSparseLevelSetImageFilter ()
- Protected Member Functions inherited from itk::MultiphaseSparseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TIdCell >
void AllocateUpdateBuffer ()
void ApplyUpdate (TimeStepType dt)
TimeStepType CalculateChange ()
virtual ValueType CalculateUpdateValue (const OutputIndexType &, const TimeStepType &dt, const ValueType &value, const ValueType &change)
void ConstructActiveLayer ()
void ConstructLayer (SparseDataStruct *sparsePtr, StatusType from, StatusType to)
void CopyInputToOutput ()
virtual ValueType GetValueOne () const
virtual ValueType GetValueZero () const
void InitializeActiveLayerValues ()
void InitializeBackgroundConstants ()
virtual void InitializeBackgroundPixels ()
virtual void PostProcessOutput ()
virtual void PrintSelf (std::ostream &os, Indent indent) const
void ProcessOutsideList (LayerType *OutsideList, StatusType ChangeToStatus)
void ProcessStatusList (LayerType *InputList, LayerType *OutputList, StatusType ChangeToStatus, StatusType SearchForStatus)
void PropagateAllLayerValues ()
void PropagateFunctionLayerValues (unsigned int functionIndex)
void PropagateLayerValues (SparseDataStruct *sparsePtr, StatusType from, StatusType to, StatusType promote, int InOrOut)
void UpdateActiveLayerValues (TimeStepType dt, LayerType *StatusUpList, LayerType *StatusDownList)
 MultiphaseSparseFiniteDifferenceImageFilter ()
 ~MultiphaseSparseFiniteDifferenceImageFilter ()
- Protected Member Functions inherited from itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TIdCell >
virtual void ApplyUpdate (TimeStepType dt)=0
virtual void GenerateData ()
virtual void GenerateInputRequestedRegion ()
virtual bool Halt ()
 MultiphaseFiniteDifferenceImageFilter ()
TimeStepType ResolveTimeStep (const TimeStepVectorType &timeStepList, const std::vector< bool > &valid)
virtual bool ThreadedHalt (void *)
 ~MultiphaseFiniteDifferenceImageFilter ()
- Protected Member Functions inherited from itk::InPlaceImageFilter< TFeatureImage, TOutputImage >
virtual void AllocateOutputs ()
virtual bool GetRunningInPlace () const
 InPlaceImageFilter ()
virtual void ReleaseInputs ()
 ~InPlaceImageFilter ()
- Protected Member Functions inherited from itk::ImageToImageFilter< TFeatureImage, TOutputImage >
virtual void CallCopyInputRegionToOutputRegion (OutputImageRegionType &destRegion, const InputImageRegionType &srcRegion)
virtual void CallCopyOutputRegionToInputRegion (InputImageRegionType &destRegion, const OutputImageRegionType &srcRegion)
 ImageToImageFilter ()
virtual void VerifyInputInformation ()
 ~ImageToImageFilter ()
void PushBackInput (const DataObject *input)
void PushFrontInput (const DataObject *input)
- Protected Member Functions inherited from itk::ImageSource< TOutputImage >
virtual void AfterThreadedGenerateData ()
virtual void BeforeThreadedGenerateData ()
 ImageSource ()
virtual unsigned int SplitRequestedRegion (unsigned int i, unsigned int num, OutputImageRegionType &splitRegion)
virtual void ThreadedGenerateData (const OutputImageRegionType &outputRegionForThread, ThreadIdType threadId)
virtual ~ImageSource ()
- Protected Member Functions inherited from itk::ProcessObject
virtual void AddInput (DataObject *input)
virtual void AddOutput (DataObject *output)
bool AddRequiredInputName (const DataObjectIdentifierType &)
virtual void CacheInputReleaseDataFlags ()
virtual void GenerateOutputInformation ()
virtual void GenerateOutputRequestedRegion (DataObject *output)
virtual const
DataObjectPointerArraySizeType
GetNumberOfRequiredInputs ()
virtual const
DataObjectPointerArraySizeType
GetNumberOfRequiredOutputs ()
bool IsIndexedName (const DataObjectIdentifierType &) const
bool IsRequiredInputName (const DataObjectIdentifierType &) const
 itkLegacyMacro (virtual void RemoveInput(DataObject *input))
 itkLegacyMacro (virtual void RemoveOutput(DataObject *output))
 itkLegacyMacro (void SetNumberOfInputs(DataObjectPointerArraySizeType num))
 itkLegacyMacro (void SetNumberOfOutputs(DataObjectPointerArraySizeType num))
DataObjectPointerArraySizeType MakeIndexFromName (const DataObjectIdentifierType &) const
DataObjectIdentifierType MakeNameFromIndex (DataObjectPointerArraySizeType) const
 ProcessObject ()
virtual void PropagateResetPipeline ()
virtual void RemoveInput (const DataObjectIdentifierType &key)
virtual void RemoveInput (DataObjectPointerArraySizeType)
virtual void RemoveOutput (const DataObjectIdentifierType &key)
virtual void RemoveOutput (DataObjectPointerArraySizeType idx)
bool RemoveRequiredInputName (const DataObjectIdentifierType &)
virtual void RestoreInputReleaseDataFlags ()
virtual void SetInput (const DataObjectIdentifierType &key, DataObject *input)
virtual void SetNthInput (DataObjectPointerArraySizeType num, DataObject *input)
virtual void SetNthOutput (DataObjectPointerArraySizeType num, DataObject *output)
void SetNumberOfIndexedInputs (DataObjectPointerArraySizeType num)
void SetNumberOfIndexedOutputs (DataObjectPointerArraySizeType num)
virtual void SetNumberOfRequiredInputs (DataObjectPointerArraySizeType)
virtual void SetNumberOfRequiredOutputs (DataObjectPointerArraySizeType _arg)
virtual void SetOutput (const DataObjectIdentifierType &key, DataObject *output)
virtual void SetPrimaryInput (DataObject *input)
virtual void SetPrimaryOutput (DataObject *output)
void SetRequiredInputNames (const NameArray &)
virtual void VerifyPreconditions ()
 ~ProcessObject ()
DataObjectGetInput (const DataObjectIdentifierType &key)
const DataObjectGetInput (const DataObjectIdentifierType &key) const
DataObjectGetInput (DataObjectPointerArraySizeType)
const DataObjectGetInput (DataObjectPointerArraySizeType idx) const
DataObjectGetPrimaryInput ()
const DataObjectGetPrimaryInput () const
DataObjectGetOutput (const DataObjectIdentifierType &key)
const DataObjectGetOutput (const DataObjectIdentifierType &key) const
DataObjectGetOutput (DataObjectPointerArraySizeType idx)
const DataObjectGetOutput (DataObjectPointerArraySizeType idx) const
DataObjectGetPrimaryOutput ()
const DataObjectGetPrimaryOutput () const
- Protected Member Functions inherited from itk::Object
 Object ()
bool PrintObservers (std::ostream &os, Indent indent) const
virtual void SetTimeStamp (const TimeStamp &time)
virtual ~Object ()
- Protected Member Functions inherited from itk::LightObject
virtual LightObject::Pointer InternalClone () const
 LightObject ()
virtual void PrintHeader (std::ostream &os, Indent indent) const
virtual void PrintTrailer (std::ostream &os, Indent indent) const
virtual ~LightObject ()

Protected Attributes

SharedDataPointer m_SharedData
- Protected Attributes inherited from itk::MultiphaseSparseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TIdCell >
ValueType m_BackgroundValue
ValueType m_IsoSurfaceValue
NeighborListType m_NeighborList
unsigned int m_NumberOfLayers
std::vector< ValueTypem_PixelDistance
std::vector< SparseDataStruct * > m_SparseData
bool m_InterpolateSurfaceLocation
- Protected Attributes inherited from itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TIdCell >
std::vector
< FiniteDifferenceFunctionPointer
m_DifferenceFunctions
unsigned int m_ElapsedIterations
IdCellType m_FunctionCount
KdTreePointer m_KdTree
std::vector< InputImagePointerm_LevelSet
VectorIdCellType m_Lookup
double m_MaximumRMSError
unsigned int m_NumberOfIterations
double m_RMSChange
bool m_UseImageSpacing

Additional Inherited Members

- Static Protected Attributes inherited from itk::MultiphaseSparseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TIdCell >
static double m_ConstantGradientValue
static const StatusType m_StatusActiveChangingDown
static const StatusType m_StatusActiveChangingUp
static const StatusType m_StatusBoundaryPixel
static const StatusType m_StatusChanging
static const StatusType m_StatusNull
static const ValueType m_ValueOne
static const ValueType m_ValueZero

Detailed Description

template<class TInputImage, class TFeatureImage, class TOutputImage, class TFunction = ScalarChanAndVeseLevelSetFunction< TInputImage, TFeatureImage >, class TSharedData = typename TFunction::SharedDataType, typename TIdCell = unsigned int>
class itk::ScalarChanAndVeseSparseLevelSetImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TSharedData, TIdCell >

Sparse implementation of the Chan and Vese multiphase level set image filter.

This code was adapted from the paper:

   "An active contour model without edges"
    T. Chan and L. Vese.
    In Scale-Space Theories in Computer Vision, pages 141-151, 1999.
Author:
Mosaliganti K., Smith B., Gelas A., Gouaillard A., Megason S.

This code was taken from the Insight Journal paper:

"Cell Tracking using Coupled Active Surfaces for Nuclei and Membranes"
http://www.insight-journal.org/browse/publication/642
http://hdl.handle.net/10380/3055

That is based on the papers:

"Level Set Segmentation: Active Contours without edge"
http://www.insight-journal.org/browse/publication/322
http://hdl.handle.net/1926/1532

and

"Level set segmentation using coupled active surfaces"
http://www.insight-journal.org/browse/publication/323
http://hdl.handle.net/1926/1533
Wiki Examples:

Definition at line 67 of file itkScalarChanAndVeseSparseLevelSetImageFilter.h.


Member Typedef Documentation

template<class TInputImage , class TFeatureImage , class TOutputImage , class TFunction = ScalarChanAndVeseLevelSetFunction< TInputImage, TFeatureImage >, class TSharedData = typename TFunction::SharedDataType, typename TIdCell = unsigned int>
typedef SmartPointer< const Self > itk::ScalarChanAndVeseSparseLevelSetImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TSharedData, TIdCell >::ConstPointer
template<class TInputImage , class TFeatureImage , class TOutputImage , class TFunction = ScalarChanAndVeseLevelSetFunction< TInputImage, TFeatureImage >, class TSharedData = typename TFunction::SharedDataType, typename TIdCell = unsigned int>
typedef FeatureImageType::Pointer itk::ScalarChanAndVeseSparseLevelSetImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TSharedData, TIdCell >::FeatureImagePointer
template<class TInputImage , class TFeatureImage , class TOutputImage , class TFunction = ScalarChanAndVeseLevelSetFunction< TInputImage, TFeatureImage >, class TSharedData = typename TFunction::SharedDataType, typename TIdCell = unsigned int>
typedef TFeatureImage itk::ScalarChanAndVeseSparseLevelSetImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TSharedData, TIdCell >::FeatureImageType
template<class TInputImage , class TFeatureImage , class TOutputImage , class TFunction = ScalarChanAndVeseLevelSetFunction< TInputImage, TFeatureImage >, class TSharedData = typename TFunction::SharedDataType, typename TIdCell = unsigned int>
typedef FeatureImageType::IndexType itk::ScalarChanAndVeseSparseLevelSetImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TSharedData, TIdCell >::FeatureIndexType
template<class TInputImage , class TFeatureImage , class TOutputImage , class TFunction = ScalarChanAndVeseLevelSetFunction< TInputImage, TFeatureImage >, class TSharedData = typename TFunction::SharedDataType, typename TIdCell = unsigned int>
typedef FeatureIndexType::IndexValueType itk::ScalarChanAndVeseSparseLevelSetImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TSharedData, TIdCell >::FeatureIndexValueType
template<class TInputImage , class TFeatureImage , class TOutputImage , class TFunction = ScalarChanAndVeseLevelSetFunction< TInputImage, TFeatureImage >, class TSharedData = typename TFunction::SharedDataType, typename TIdCell = unsigned int>
typedef FeatureImageType::PixelType itk::ScalarChanAndVeseSparseLevelSetImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TSharedData, TIdCell >::FeaturePixelType
template<class TInputImage , class TFeatureImage , class TOutputImage , class TFunction = ScalarChanAndVeseLevelSetFunction< TInputImage, TFeatureImage >, class TSharedData = typename TFunction::SharedDataType, typename TIdCell = unsigned int>
typedef FeatureImageType::RegionType itk::ScalarChanAndVeseSparseLevelSetImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TSharedData, TIdCell >::FeatureRegionType
template<class TInputImage , class TFeatureImage , class TOutputImage , class TFunction = ScalarChanAndVeseLevelSetFunction< TInputImage, TFeatureImage >, class TSharedData = typename TFunction::SharedDataType, typename TIdCell = unsigned int>
typedef Superclass::FiniteDifferenceFunctionType itk::ScalarChanAndVeseSparseLevelSetImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TSharedData, TIdCell >::FiniteDifferenceFunctionType

The value type of the time step. This is distinct from PixelType because PixelType may often be a vector value, while the TimeStep is a scalar value.

Reimplemented from itk::MultiphaseSparseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TIdCell >.

Definition at line 108 of file itkScalarChanAndVeseSparseLevelSetImageFilter.h.

template<class TInputImage , class TFeatureImage , class TOutputImage , class TFunction = ScalarChanAndVeseLevelSetFunction< TInputImage, TFeatureImage >, class TSharedData = typename TFunction::SharedDataType, typename TIdCell = unsigned int>
typedef FunctionType::Pointer itk::ScalarChanAndVeseSparseLevelSetImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TSharedData, TIdCell >::FunctionPtr
template<class TInputImage , class TFeatureImage , class TOutputImage , class TFunction = ScalarChanAndVeseLevelSetFunction< TInputImage, TFeatureImage >, class TSharedData = typename TFunction::SharedDataType, typename TIdCell = unsigned int>
typedef TFunction itk::ScalarChanAndVeseSparseLevelSetImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TSharedData, TIdCell >::FunctionType
template<class TInputImage , class TFeatureImage , class TOutputImage , class TFunction = ScalarChanAndVeseLevelSetFunction< TInputImage, TFeatureImage >, class TSharedData = typename TFunction::SharedDataType, typename TIdCell = unsigned int>
typedef Superclass::IdCellType itk::ScalarChanAndVeseSparseLevelSetImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TSharedData, TIdCell >::IdCellType
template<class TInputImage , class TFeatureImage , class TOutputImage , class TFunction = ScalarChanAndVeseLevelSetFunction< TInputImage, TFeatureImage >, class TSharedData = typename TFunction::SharedDataType, typename TIdCell = unsigned int>
typedef OutputImageType::IndexType itk::ScalarChanAndVeseSparseLevelSetImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TSharedData, TIdCell >::IndexType
template<class TInputImage , class TFeatureImage , class TOutputImage , class TFunction = ScalarChanAndVeseLevelSetFunction< TInputImage, TFeatureImage >, class TSharedData = typename TFunction::SharedDataType, typename TIdCell = unsigned int>
typedef Superclass::InputImagePointer itk::ScalarChanAndVeseSparseLevelSetImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TSharedData, TIdCell >::InputImagePointer
template<class TInputImage , class TFeatureImage , class TOutputImage , class TFunction = ScalarChanAndVeseLevelSetFunction< TInputImage, TFeatureImage >, class TSharedData = typename TFunction::SharedDataType, typename TIdCell = unsigned int>
typedef Superclass::InputImageType itk::ScalarChanAndVeseSparseLevelSetImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TSharedData, TIdCell >::InputImageType
template<class TInputImage , class TFeatureImage , class TOutputImage , class TFunction = ScalarChanAndVeseLevelSetFunction< TInputImage, TFeatureImage >, class TSharedData = typename TFunction::SharedDataType, typename TIdCell = unsigned int>
typedef Superclass::InputPointType itk::ScalarChanAndVeseSparseLevelSetImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TSharedData, TIdCell >::InputPointType
template<class TInputImage , class TFeatureImage , class TOutputImage , class TFunction = ScalarChanAndVeseLevelSetFunction< TInputImage, TFeatureImage >, class TSharedData = typename TFunction::SharedDataType, typename TIdCell = unsigned int>
typedef Superclass::InputSpacingType itk::ScalarChanAndVeseSparseLevelSetImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TSharedData, TIdCell >::InputSpacingType
template<class TInputImage , class TFeatureImage , class TOutputImage , class TFunction = ScalarChanAndVeseLevelSetFunction< TInputImage, TFeatureImage >, class TSharedData = typename TFunction::SharedDataType, typename TIdCell = unsigned int>
typedef TOutputImage itk::ScalarChanAndVeseSparseLevelSetImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TSharedData, TIdCell >::OutputImageType
template<class TInputImage , class TFeatureImage , class TOutputImage , class TFunction = ScalarChanAndVeseLevelSetFunction< TInputImage, TFeatureImage >, class TSharedData = typename TFunction::SharedDataType, typename TIdCell = unsigned int>
typedef OutputImageType::PixelType itk::ScalarChanAndVeseSparseLevelSetImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TSharedData, TIdCell >::OutputPixelType
template<class TInputImage , class TFeatureImage , class TOutputImage , class TFunction = ScalarChanAndVeseLevelSetFunction< TInputImage, TFeatureImage >, class TSharedData = typename TFunction::SharedDataType, typename TIdCell = unsigned int>
typedef SmartPointer< Self > itk::ScalarChanAndVeseSparseLevelSetImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TSharedData, TIdCell >::Pointer
template<class TInputImage , class TFeatureImage , class TOutputImage , class TFunction = ScalarChanAndVeseLevelSetFunction< TInputImage, TFeatureImage >, class TSharedData = typename TFunction::SharedDataType, typename TIdCell = unsigned int>
typedef ROIFilterType::Pointer itk::ScalarChanAndVeseSparseLevelSetImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TSharedData, TIdCell >::ROIFilterPointer
template<class TInputImage , class TFeatureImage , class TOutputImage , class TFunction = ScalarChanAndVeseLevelSetFunction< TInputImage, TFeatureImage >, class TSharedData = typename TFunction::SharedDataType, typename TIdCell = unsigned int>
typedef RegionOfInterestImageFilter< FeatureImageType, FeatureImageType > itk::ScalarChanAndVeseSparseLevelSetImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TSharedData, TIdCell >::ROIFilterType
template<class TInputImage , class TFeatureImage , class TOutputImage , class TFunction = ScalarChanAndVeseLevelSetFunction< TInputImage, TFeatureImage >, class TSharedData = typename TFunction::SharedDataType, typename TIdCell = unsigned int>
typedef ScalarChanAndVeseSparseLevelSetImageFilter itk::ScalarChanAndVeseSparseLevelSetImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TSharedData, TIdCell >::Self
template<class TInputImage , class TFeatureImage , class TOutputImage , class TFunction = ScalarChanAndVeseLevelSetFunction< TInputImage, TFeatureImage >, class TSharedData = typename TFunction::SharedDataType, typename TIdCell = unsigned int>
typedef SharedDataType::Pointer itk::ScalarChanAndVeseSparseLevelSetImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TSharedData, TIdCell >::SharedDataPointer
template<class TInputImage , class TFeatureImage , class TOutputImage , class TFunction = ScalarChanAndVeseLevelSetFunction< TInputImage, TFeatureImage >, class TSharedData = typename TFunction::SharedDataType, typename TIdCell = unsigned int>
typedef TSharedData itk::ScalarChanAndVeseSparseLevelSetImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TSharedData, TIdCell >::SharedDataType
template<class TInputImage , class TFeatureImage , class TOutputImage , class TFunction = ScalarChanAndVeseLevelSetFunction< TInputImage, TFeatureImage >, class TSharedData = typename TFunction::SharedDataType, typename TIdCell = unsigned int>
typedef MultiphaseSparseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TIdCell > itk::ScalarChanAndVeseSparseLevelSetImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TSharedData, TIdCell >::Superclass
template<class TInputImage , class TFeatureImage , class TOutputImage , class TFunction = ScalarChanAndVeseLevelSetFunction< TInputImage, TFeatureImage >, class TSharedData = typename TFunction::SharedDataType, typename TIdCell = unsigned int>
typedef Superclass::TimeStepType itk::ScalarChanAndVeseSparseLevelSetImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TSharedData, TIdCell >::TimeStepType
template<class TInputImage , class TFeatureImage , class TOutputImage , class TFunction = ScalarChanAndVeseLevelSetFunction< TInputImage, TFeatureImage >, class TSharedData = typename TFunction::SharedDataType, typename TIdCell = unsigned int>
typedef Superclass::ValueType itk::ScalarChanAndVeseSparseLevelSetImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TSharedData, TIdCell >::ValueType

Constructor & Destructor Documentation

template<class TInputImage , class TFeatureImage , class TOutputImage , class TFunction = ScalarChanAndVeseLevelSetFunction< TInputImage, TFeatureImage >, class TSharedData = typename TFunction::SharedDataType, typename TIdCell = unsigned int>
itk::ScalarChanAndVeseSparseLevelSetImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TSharedData, TIdCell >::ScalarChanAndVeseSparseLevelSetImageFilter ( )
inlineprotected
template<class TInputImage , class TFeatureImage , class TOutputImage , class TFunction = ScalarChanAndVeseLevelSetFunction< TInputImage, TFeatureImage >, class TSharedData = typename TFunction::SharedDataType, typename TIdCell = unsigned int>
itk::ScalarChanAndVeseSparseLevelSetImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TSharedData, TIdCell >::~ScalarChanAndVeseSparseLevelSetImageFilter ( )
inlineprotected

Member Function Documentation

template<class TInputImage , class TFeatureImage , class TOutputImage , class TFunction = ScalarChanAndVeseLevelSetFunction< TInputImage, TFeatureImage >, class TSharedData = typename TFunction::SharedDataType, typename TIdCell = unsigned int>
virtual::itk::LightObject::Pointer itk::ScalarChanAndVeseSparseLevelSetImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TSharedData, TIdCell >::CreateAnother ( void  ) const
virtual

Create an object from an instance, potentially deferring to a factory. This method allows you to create an instance of an object that is exactly the same type as the referring object. This is useful in cases where an object has been cast back to a base class.

Reimplemented from itk::MultiphaseSparseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TIdCell >.

template<class TInputImage , class TFeatureImage , class TOutputImage , class TFunction = ScalarChanAndVeseLevelSetFunction< TInputImage, TFeatureImage >, class TSharedData = typename TFunction::SharedDataType, typename TIdCell = unsigned int>
virtual const char* itk::ScalarChanAndVeseSparseLevelSetImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TSharedData, TIdCell >::GetNameOfClass ( ) const
virtual
template<class TInputImage , class TFeatureImage , class TOutputImage , class TFunction = ScalarChanAndVeseLevelSetFunction< TInputImage, TFeatureImage >, class TSharedData = typename TFunction::SharedDataType, typename TIdCell = unsigned int>
virtual void itk::ScalarChanAndVeseSparseLevelSetImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TSharedData, TIdCell >::Initialize ( )
protectedvirtual

Constructs the sparse field layers and initializes their values.

Reimplemented from itk::MultiphaseSparseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TIdCell >.

template<class TInputImage , class TFeatureImage , class TOutputImage , class TFunction = ScalarChanAndVeseLevelSetFunction< TInputImage, TFeatureImage >, class TSharedData = typename TFunction::SharedDataType, typename TIdCell = unsigned int>
virtual void itk::ScalarChanAndVeseSparseLevelSetImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TSharedData, TIdCell >::InitializeIteration ( )
protectedvirtual

This method is optionally defined by a subclass and is called immediately prior to each iterative CalculateChange-ApplyUpdate cycle. It can be used to set global variables needed for the next iteration (ie. average gradient magnitude of the image in anisotropic diffusion functions), or otherwise prepare for the next iteration.

Reimplemented from itk::MultiphaseSparseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TIdCell >.

template<class TInputImage , class TFeatureImage , class TOutputImage , class TFunction = ScalarChanAndVeseLevelSetFunction< TInputImage, TFeatureImage >, class TSharedData = typename TFunction::SharedDataType, typename TIdCell = unsigned int>
static Pointer itk::ScalarChanAndVeseSparseLevelSetImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TSharedData, TIdCell >::New ( )
static
template<class TInputImage , class TFeatureImage , class TOutputImage , class TFunction = ScalarChanAndVeseLevelSetFunction< TInputImage, TFeatureImage >, class TSharedData = typename TFunction::SharedDataType, typename TIdCell = unsigned int>
virtual void itk::ScalarChanAndVeseSparseLevelSetImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TSharedData, TIdCell >::SetFeatureImage ( const FeatureImagePointer  f)
inlinevirtual

End concept checking Set/Get the feature image to be used for speed function of the level set equation. Equivalent to calling Set/GetInput(1, ..)

Definition at line 131 of file itkScalarChanAndVeseSparseLevelSetImageFilter.h.

template<class TInputImage , class TFeatureImage , class TOutputImage , class TFunction = ScalarChanAndVeseLevelSetFunction< TInputImage, TFeatureImage >, class TSharedData = typename TFunction::SharedDataType, typename TIdCell = unsigned int>
itk::ScalarChanAndVeseSparseLevelSetImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TSharedData, TIdCell >::typedef ( Concept::HasNumericTraits< OutputPixelType )

Begin concept checking This class requires OutputHasNumericTraitsCheck in the form of ( Concept::HasNumericTraits< OutputPixelType > )

template<class TInputImage , class TFeatureImage , class TOutputImage , class TFunction = ScalarChanAndVeseLevelSetFunction< TInputImage, TFeatureImage >, class TSharedData = typename TFunction::SharedDataType, typename TIdCell = unsigned int>
virtual void itk::ScalarChanAndVeseSparseLevelSetImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TSharedData, TIdCell >::UpdatePixel ( unsigned int  functionIndex,
unsigned int  idx,
NeighborhoodIterator< InputImageType > &  iterator,
ValueType newValue,
bool &  status 
)
protectedvirtual

Member Data Documentation

template<class TInputImage , class TFeatureImage , class TOutputImage , class TFunction = ScalarChanAndVeseLevelSetFunction< TInputImage, TFeatureImage >, class TSharedData = typename TFunction::SharedDataType, typename TIdCell = unsigned int>
const unsigned int itk::ScalarChanAndVeseSparseLevelSetImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TSharedData, TIdCell >::ImageDimension = TInputImage::ImageDimension
static

Dimensionality of input and output data is assumed to be the same.

Reimplemented from itk::MultiphaseSparseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TIdCell >.

Definition at line 85 of file itkScalarChanAndVeseSparseLevelSetImageFilter.h.

template<class TInputImage , class TFeatureImage , class TOutputImage , class TFunction = ScalarChanAndVeseLevelSetFunction< TInputImage, TFeatureImage >, class TSharedData = typename TFunction::SharedDataType, typename TIdCell = unsigned int>
SharedDataPointer itk::ScalarChanAndVeseSparseLevelSetImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TSharedData, TIdCell >::m_SharedData
protected

The documentation for this class was generated from the following file: