#include <itkSimplexMeshAdaptTopologyFilter.h>

Inheritance diagram for itk::SimplexMeshAdaptTopologyFilter< TInputMesh, TOutputMesh >:

Collaboration diagram for itk::SimplexMeshAdaptTopologyFilter< TInputMesh, TOutputMesh >:

Classes
class	SimplexCellVisitor

Public Types
typedef InputMeshType::CellAutoPointer	CellAutoPointer
typedef InputMeshType::CellIdentifier	CellIdentifier
typedef CellMultiVisitorType::Pointer	CellMultiVisitorPointer
typedef InputCellType::MultiVisitor	CellMultiVisitorType
typedef SmartPointer< const Self >	ConstPointer
typedef CovariantVector < typename InputVectorType::ValueType, 3 >	CovariantVectorType
typedef DoubleValueMapType::Iterator	DoubleContainerIterator
typedef itk::MapContainer < CellIdentifier, double >	DoubleValueMapType
typedef InputCellType::CellAutoPointer	InputCellAutoPointer
typedef InputCellType::PointIdIterator	InputCellPointIdIterator
typedef InputMeshType::MeshTraits::CellTraits	InputCellTraitsType
typedef InputMeshType::CellType	InputCellType
typedef InputMeshType::Pointer	InputMeshPointer
typedef TInputMesh	InputMeshType
typedef InputMeshType::PixelType	InputPixelType
typedef InputMeshType::PointType	InputPointType
typedef InputPolygonType::PointIdIterator	InputPolygonPointIdIterator
typedef itk::PolygonCell < InputCellType >	InputPolygonType
typedef InputMeshType::VectorType	InputVectorType
typedef OutputMeshType::CellType	OutputCellType
typedef OutputMeshType::Pointer	OutputMeshPointer
typedef TOutputMesh	OutputMeshType
typedef itk::PolygonCell < OutputCellType >	OutputPolygonType
typedef SmartPointer< Self >	Pointer
typedef InputMeshType::PointIdentifier	PointIdentifier
typedef SimplexMeshAdaptTopologyFilter	Self
typedef SimplexVisitorInterfaceType::Pointer	SimplexVisitorInterfacePointer
typedef itk::CellInterfaceVisitorImplementation < InputPixelType, InputCellTraitsType, InputPolygonType, SimplexCellVisitor >	SimplexVisitorInterfaceType
typedef MeshToMeshFilter < TInputMesh, TOutputMesh >	Superclass
Public Types inherited from itk::MeshToMeshFilter< TInputMesh, TOutputMesh >
Public Types inherited from itk::MeshSource< TOutputMesh >
typedef Superclass::DataObjectIdentifierType	DataObjectIdentifierType
typedef DataObject::Pointer	DataObjectPointer
typedef ProcessObject::DataObjectPointerArraySizeType	DataObjectPointerArraySizeType
Public Types inherited from itk::ProcessObject
typedef std::vector < DataObjectPointer >	DataObjectPointerArray
typedef std::vector < DataObjectIdentifierType >	NameArray
Public Types inherited from itk::Object
Public Types inherited from itk::LightObject

Public Member Functions
virtual ::itk::LightObject::Pointer	CreateAnother (void) const
virtual int	GetModifiedCount () const
virtual const char *	GetNameOfClass () const
virtual int	GetSelectionMethod () const
virtual double	GetThreshold () const
virtual void	SetSelectionMethod (int _arg)
virtual void	SetThreshold (double _arg)
Public Member Functions inherited from itk::MeshToMeshFilter< TInputMesh, TOutputMesh >
const InputMeshType *	GetInput (void) const
const InputMeshType *	GetInput (unsigned int idx) const
void	SetInput (const InputMeshType *input)
Public Member Functions inherited from itk::MeshSource< TOutputMesh >
OutputMeshType *	GetOutput (void)
OutputMeshType *	GetOutput (unsigned int idx)
virtual void	GraftNthOutput (unsigned int idx, DataObject *output)
virtual void	GraftOutput (const DataObjectIdentifierType &key, DataObject *output)
void	SetOutput (TOutputMesh *output)
virtual void	GraftOutput (DataObject *output)
virtual DataObjectPointer	MakeOutput (DataObjectPointerArraySizeType idx)
Public Member Functions inherited from itk::ProcessObject
virtual void	AbortGenerateDataOff ()
virtual void	AbortGenerateDataOn ()
virtual void	EnlargeOutputRequestedRegion (DataObject *)
virtual const bool &	GetAbortGenerateData ()
NameArray	GetInputNames () const
MultiThreader *	GetMultiThreader () const
DataObjectPointerArraySizeType	GetNumberOfIndexedInputs () const
DataObjectPointerArraySizeType	GetNumberOfInputs () const
DataObjectPointerArraySizeType	GetNumberOfOutputs () const
virtual DataObjectPointerArraySizeType	GetNumberOfValidRequiredInputs () const
NameArray	GetOutputNames () const
virtual const float &	GetProgress ()
NameArray	GetRequiredInputNames () const
bool	HasInput (const DataObjectIdentifierType &key) const
bool	HasOutput (const DataObjectIdentifierType &key) const
virtual DataObjectPointer	MakeOutput (const DataObjectIdentifierType &)
virtual void	PrepareOutputs ()
virtual void	PropagateRequestedRegion (DataObject *output)
virtual void	ResetPipeline ()
virtual void	SetAbortGenerateData (bool _arg)
virtual void	SetProgress (float _arg)
virtual void	Update ()
virtual void	UpdateLargestPossibleRegion ()
virtual void	UpdateOutputData (DataObject *output)
virtual void	UpdateOutputInformation ()
void	UpdateProgress (float amount)
DataObjectPointerArray	GetInputs ()
DataObjectPointerArray	GetOutputs ()
DataObjectPointerArray	GetIndexedInputs ()
DataObjectPointerArray	GetIndexedOutputs ()
DataObjectPointerArraySizeType	GetNumberOfIndexedOutputs () const
virtual void	SetReleaseDataFlag (bool flag)
virtual bool	GetReleaseDataFlag () const
void	ReleaseDataFlagOn ()
void	ReleaseDataFlagOff ()
virtual void	SetReleaseDataBeforeUpdateFlag (bool _arg)
virtual const bool &	GetReleaseDataBeforeUpdateFlag ()
virtual void	ReleaseDataBeforeUpdateFlagOn ()
virtual void	ReleaseDataBeforeUpdateFlagOff ()
virtual void	SetNumberOfThreads (ThreadIdType _arg)
virtual const ThreadIdType &	GetNumberOfThreads ()
Public Member Functions inherited from itk::Object
unsigned long	AddObserver (const EventObject &event, Command *)
unsigned long	AddObserver (const EventObject &event, Command *) const
virtual void	DebugOff () const
virtual void	DebugOn () const
Command *	GetCommand (unsigned long tag)
bool	GetDebug () const
MetaDataDictionary &	GetMetaDataDictionary (void)
const MetaDataDictionary &	GetMetaDataDictionary (void) const
virtual unsigned long	GetMTime () const
virtual const TimeStamp &	GetTimeStamp () const
bool	HasObserver (const EventObject &event) const
void	InvokeEvent (const EventObject &)
void	InvokeEvent (const EventObject &) const
virtual void	Modified () const
virtual void	Register () const
void	RemoveAllObservers ()
void	RemoveObserver (unsigned long tag)
void	SetDebug (bool debugFlag) const
void	SetMetaDataDictionary (const MetaDataDictionary &rhs)
virtual void	SetReferenceCount (int)
virtual void	UnRegister () const
Public Member Functions inherited from itk::LightObject
virtual void	Delete ()
virtual int	GetReferenceCount () const
	itkCloneMacro (Self)
void	Print (std::ostream &os, Indent indent=0) const

Static Public Member Functions
static Pointer	New ()

Protected Member Functions
InputPointType	ComputeCellCenter (InputCellAutoPointer &simplexCell)
void	ComputeCellParameters ()
void	CopyInputMeshToOutputMeshGeometryData ()
virtual void	GenerateData ()
void	Initialize ()
void	ModifyNeighborCells (CellIdentifier id1, CellIdentifier id2, PointIdentifier insertPointId)
void	operator= (const Self &)
void	PrintSelf (std::ostream &os, Indent indent) const
	SimplexMeshAdaptTopologyFilter ()
	SimplexMeshAdaptTopologyFilter (const Self &)
	~SimplexMeshAdaptTopologyFilter ()
Protected Member Functions inherited from itk::MeshToMeshFilter< TInputMesh, TOutputMesh >
void	CopyInputMeshToOutputMeshCellData ()
void	CopyInputMeshToOutputMeshCellLinks ()
void	CopyInputMeshToOutputMeshCells ()
void	CopyInputMeshToOutputMeshPointData ()
void	CopyInputMeshToOutputMeshPoints ()
	MeshToMeshFilter ()
	~MeshToMeshFilter ()
Protected Member Functions inherited from itk::MeshSource< TOutputMesh >
void	GenerateInputRequestedRegion ()
	MeshSource ()
virtual	~MeshSource ()
Protected Member Functions inherited from itk::ProcessObject
virtual void	AddInput (DataObject *input)
virtual void	AddOutput (DataObject *output)
bool	AddRequiredInputName (const DataObjectIdentifierType &)
virtual void	CacheInputReleaseDataFlags ()
virtual void	GenerateOutputInformation ()
virtual void	GenerateOutputRequestedRegion (DataObject *output)
virtual const DataObjectPointerArraySizeType &	GetNumberOfRequiredInputs ()
virtual const DataObjectPointerArraySizeType &	GetNumberOfRequiredOutputs ()
bool	IsIndexedName (const DataObjectIdentifierType &) const
bool	IsRequiredInputName (const DataObjectIdentifierType &) const
	itkLegacyMacro (virtual void RemoveInput(DataObject *input))
	itkLegacyMacro (virtual void RemoveOutput(DataObject *output))
	itkLegacyMacro (void SetNumberOfInputs(DataObjectPointerArraySizeType num))
	itkLegacyMacro (void SetNumberOfOutputs(DataObjectPointerArraySizeType num))
DataObjectPointerArraySizeType	MakeIndexFromName (const DataObjectIdentifierType &) const
DataObjectIdentifierType	MakeNameFromIndex (DataObjectPointerArraySizeType) const
	ProcessObject ()
virtual void	PropagateResetPipeline ()
virtual void	ReleaseInputs ()
virtual void	RemoveInput (const DataObjectIdentifierType &key)
virtual void	RemoveInput (DataObjectPointerArraySizeType)
virtual void	RemoveOutput (const DataObjectIdentifierType &key)
virtual void	RemoveOutput (DataObjectPointerArraySizeType idx)
bool	RemoveRequiredInputName (const DataObjectIdentifierType &)
virtual void	RestoreInputReleaseDataFlags ()
virtual void	SetInput (const DataObjectIdentifierType &key, DataObject *input)
virtual void	SetNthInput (DataObjectPointerArraySizeType num, DataObject *input)
virtual void	SetNthOutput (DataObjectPointerArraySizeType num, DataObject *output)
void	SetNumberOfIndexedInputs (DataObjectPointerArraySizeType num)
void	SetNumberOfIndexedOutputs (DataObjectPointerArraySizeType num)
virtual void	SetNumberOfRequiredInputs (DataObjectPointerArraySizeType)
virtual void	SetNumberOfRequiredOutputs (DataObjectPointerArraySizeType _arg)
virtual void	SetOutput (const DataObjectIdentifierType &key, DataObject *output)
virtual void	SetPrimaryInput (DataObject *input)
virtual void	SetPrimaryOutput (DataObject *output)
void	SetRequiredInputNames (const NameArray &)
virtual void	VerifyInputInformation ()
virtual void	VerifyPreconditions ()
	~ProcessObject ()
DataObject *	GetInput (const DataObjectIdentifierType &key)
const DataObject *	GetInput (const DataObjectIdentifierType &key) const
DataObject *	GetInput (DataObjectPointerArraySizeType)
const DataObject *	GetInput (DataObjectPointerArraySizeType idx) const
DataObject *	GetPrimaryInput ()
const DataObject *	GetPrimaryInput () const
DataObject *	GetOutput (const DataObjectIdentifierType &key)
const DataObject *	GetOutput (const DataObjectIdentifierType &key) const
DataObject *	GetOutput (DataObjectPointerArraySizeType idx)
const DataObject *	GetOutput (DataObjectPointerArraySizeType idx) const
DataObject *	GetPrimaryOutput ()
const DataObject *	GetPrimaryOutput () const
virtual void	PushBackInput (const DataObject *input)
virtual void	PopBackInput ()
virtual void	PushFrontInput (const DataObject *input)
virtual void	PopFrontInput ()
Protected Member Functions inherited from itk::Object
	Object ()
bool	PrintObservers (std::ostream &os, Indent indent) const
virtual void	SetTimeStamp (const TimeStamp &time)
virtual	~Object ()
Protected Member Functions inherited from itk::LightObject
virtual LightObject::Pointer	InternalClone () const
	LightObject ()
virtual void	PrintHeader (std::ostream &os, Indent indent) const
virtual void	PrintTrailer (std::ostream &os, Indent indent) const
virtual	~LightObject ()

Protected Attributes
CellIdentifier	m_IdOffset
int	m_ModifiedCount
InputCellAutoPointer	m_NewSimplexCellPointer
OutputMeshPointer	m_Output
int	m_SelectionMethod
double	m_Threshold

Detailed Description

template<class TInputMesh, class TOutputMesh>
class itk::SimplexMeshAdaptTopologyFilter< TInputMesh, TOutputMesh >

This filter changes the topology of a 2-simplex mesh.

Currently only one transformation for inserting new cells into a mesh is implemented. For insertion several criteria are compute, e.g. the curvature in a mesh point. The user can set a threshold value to control how many cells will be manipulated.

Author:: Thomas Boettger. Division Medical and Biological Informatics, German Cancer Research Center, Heidelberg.

Definition at line 50 of file itkSimplexMeshAdaptTopologyFilter.h.