itk::SimplexMeshVolumeCalculator< TInputMesh > Class Template Reference

#include <itkSimplexMeshVolumeCalculator.h>

Inheritance diagram for itk::SimplexMeshVolumeCalculator< TInputMesh >:

Collaboration diagram for itk::SimplexMeshVolumeCalculator< TInputMesh >:

List of all members.

Classes
class	SimplexCellVisitor

Public Types
typedef CellMultiVisitorType::Pointer	CellMultiVisitorPointer
typedef SimplexCellType::MultiVisitor	CellMultiVisitorType
typedef SmartPointer< const Self >	ConstPointer
typedef CovariantVector < typename VectorType::ValueType, 3 >	CovariantVectorType
typedef InputMeshType::MeshTraits::CellTraits	InputCellTraitsType
typedef InputMeshType::ConstPointer	InputMeshConstPointer
typedef InputMeshType::Pointer	InputMeshPointer
typedef TInputMesh	InputMeshType
typedef InputMeshType::NeighborListType	InputNeighbors
typedef InputMeshType::NeighborListType::iterator	InputNeighborsIterator
typedef InputMeshType::PixelType	InputPixelType
typedef InputMeshType::PointsContainer	InputPointsContainer
typedef InputPointsContainer::ConstIterator	InputPointsContainerIterator
typedef InputPointsContainer::ConstPointer	InputPointsContainerPointer
typedef InputMeshType::PointType	InputPointType
typedef SmartPointer< Self >	Pointer
typedef PointMapType::Pointer	PointMapPointer
typedef itk::MapContainer < IdentifierType, InputPointType >	PointMapType
typedef SimplexMeshVolumeCalculator	Self
typedef InputMeshType::CellType	SimplexCellType
typedef itk::PolygonCell < SimplexCellType >	SimplexPolygonType
typedef SimplexVisitorInterfaceType::Pointer	SimplexVisitorInterfacePointer
typedef itk::CellInterfaceVisitorImplementation < InputPixelType, InputCellTraitsType, SimplexPolygonType, SimplexCellVisitor >	SimplexVisitorInterfaceType
typedef Object	Superclass
typedef InputPointType::VectorType	VectorType
Public Types inherited from itk::Object
Public Types inherited from itk::LightObject

Public Member Functions
void	Compute (void)
virtual ::itk::LightObject::Pointer	CreateAnother (void) const
virtual const char *	GetNameOfClass () const
virtual double	GetVolume () const
virtual void	SetSimplexMesh (InputMeshType *_arg)
Public Member Functions inherited from itk::Object
unsigned long	AddObserver (const EventObject &event, Command *)
unsigned long	AddObserver (const EventObject &event, Command *) const
virtual void	DebugOff () const
virtual void	DebugOn () const
Command *	GetCommand (unsigned long tag)
bool	GetDebug () const
MetaDataDictionary &	GetMetaDataDictionary (void)
const MetaDataDictionary &	GetMetaDataDictionary (void) const
virtual unsigned long	GetMTime () const
virtual const TimeStamp &	GetTimeStamp () const
bool	HasObserver (const EventObject &event) const
void	InvokeEvent (const EventObject &)
void	InvokeEvent (const EventObject &) const
virtual void	Modified () const
virtual void	Register () const
void	RemoveAllObservers ()
void	RemoveObserver (unsigned long tag)
void	SetDebug (bool debugFlag) const
void	SetMetaDataDictionary (const MetaDataDictionary &rhs)
virtual void	SetReferenceCount (int)
virtual void	UnRegister () const
Public Member Functions inherited from itk::LightObject
virtual void	Delete ()
virtual int	GetReferenceCount () const
	itkCloneMacro (Self)
void	Print (std::ostream &os, Indent indent=0) const

Static Public Member Functions
static Pointer	New ()
Static Public Member Functions inherited from itk::Object
static bool	GetGlobalWarningDisplay ()
static void	GlobalWarningDisplayOff ()
static void	GlobalWarningDisplayOn ()
static void	SetGlobalWarningDisplay (bool flag)
Static Public Member Functions inherited from itk::LightObject
static void	BreakOnError ()
Protected Member Functions inherited from itk::Object
	Object ()
bool	PrintObservers (std::ostream &os, Indent indent) const
virtual void	SetTimeStamp (const TimeStamp &time)
virtual	~Object ()
Protected Member Functions inherited from itk::LightObject
virtual LightObject::Pointer	InternalClone () const
	LightObject ()
virtual void	PrintHeader (std::ostream &os, Indent indent) const
virtual void	PrintTrailer (std::ostream &os, Indent indent) const
virtual	~LightObject ()

Private Member Functions
void	CalculateTriangleVolume (InputPointType p1, InputPointType p2, InputPointType p3)
void	CreateTriangles ()
void	Finalize ()
IdentifierType	FindCellId (IdentifierType id1, IdentifierType id2, IdentifierType id3)
void	Initialize ()
void	operator= (const Self &)
	SimplexMeshVolumeCalculator (const Self &)

Private Attributes
double	m_Area
PointMapPointer	m_Centers
double	m_Kx
double	m_Ky
double	m_Kz
IndexValueType	m_Muncx
IndexValueType	m_Muncy
IndexValueType	m_Muncz
SizeValueType	m_NumberOfTriangles
InputMeshPointer	m_SimplexMesh
double	m_Volume
double	m_VolumeX
double	m_VolumeY
double	m_VolumeZ
double	m_Wxy
double	m_Wxyz
double	m_Wxz
double	m_Wyz
virtual double	GetArea () const
	SimplexMeshVolumeCalculator ()
virtual	~SimplexMeshVolumeCalculator ()
void	PrintSelf (std::ostream &os, Indent indent) const

Additional Inherited Members

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Detailed Description

template<class TInputMesh>
class itk::SimplexMeshVolumeCalculator< TInputMesh >

Adapted from itkSimplexMeshToTriangleFilter to calculate the volume of a simplex mesh using the barycenters and normals. call Compute() to calculate the volume and GetVolume() to get the value. For an example see itkDeformableSimplexMesh3DFilter.cxx (Thomas Boettger. Division Medical and Biological Informatics, German Cancer Research Center, Heidelberg.)

Author:

Leila Baghdadi MICe, Hospital for Sick Children, Toronto, Canada.

The original implementation has been replaced with an algorithm based on the discrete form of the divergence theorem. The general assumption here is that the model is of closed surface. For more details see the following reference (Alyassin A.M. et al, "Evaluation of new algorithms for the interactive measurement of surface area and volume", Med Phys 21(6) 1994.).

Definition at line 50 of file itkSimplexMeshVolumeCalculator.h.

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Member Typedef Documentation

template<class TInputMesh >

typedef CellMultiVisitorType::Pointer itk::SimplexMeshVolumeCalculator< TInputMesh >::CellMultiVisitorPointer

Definition at line 165 of file itkSimplexMeshVolumeCalculator.h.

template<class TInputMesh >

typedef SimplexCellType::MultiVisitor itk::SimplexMeshVolumeCalculator< TInputMesh >::CellMultiVisitorType

Definition at line 164 of file itkSimplexMeshVolumeCalculator.h.

template<class TInputMesh >

typedef SmartPointer< const Self > itk::SimplexMeshVolumeCalculator< TInputMesh >::ConstPointer

Reimplemented from itk::Object.

Definition at line 61 of file itkSimplexMeshVolumeCalculator.h.

template<class TInputMesh >

typedef CovariantVector< typename VectorType::ValueType, 3 > itk::SimplexMeshVolumeCalculator< TInputMesh >::CovariantVectorType

Definition at line 93 of file itkSimplexMeshVolumeCalculator.h.

template<class TInputMesh >

typedef InputMeshType::MeshTraits::CellTraits itk::SimplexMeshVolumeCalculator< TInputMesh >::InputCellTraitsType

Definition at line 75 of file itkSimplexMeshVolumeCalculator.h.

template<class TInputMesh >

typedef InputMeshType::ConstPointer itk::SimplexMeshVolumeCalculator< TInputMesh >::InputMeshConstPointer

Definition at line 71 of file itkSimplexMeshVolumeCalculator.h.

template<class TInputMesh >

typedef InputMeshType::Pointer itk::SimplexMeshVolumeCalculator< TInputMesh >::InputMeshPointer

Definition at line 70 of file itkSimplexMeshVolumeCalculator.h.

template<class TInputMesh >

typedef TInputMesh itk::SimplexMeshVolumeCalculator< TInputMesh >::InputMeshType

Definition at line 67 of file itkSimplexMeshVolumeCalculator.h.

template<class TInputMesh >

typedef InputMeshType::NeighborListType itk::SimplexMeshVolumeCalculator< TInputMesh >::InputNeighbors

Definition at line 81 of file itkSimplexMeshVolumeCalculator.h.

template<class TInputMesh >

typedef InputMeshType::NeighborListType::iterator itk::SimplexMeshVolumeCalculator< TInputMesh >::InputNeighborsIterator

Definition at line 82 of file itkSimplexMeshVolumeCalculator.h.

template<class TInputMesh >

typedef InputMeshType::PixelType itk::SimplexMeshVolumeCalculator< TInputMesh >::InputPixelType

Definition at line 74 of file itkSimplexMeshVolumeCalculator.h.

template<class TInputMesh >

typedef InputMeshType::PointsContainer itk::SimplexMeshVolumeCalculator< TInputMesh >::InputPointsContainer

Definition at line 77 of file itkSimplexMeshVolumeCalculator.h.

template<class TInputMesh >

typedef InputPointsContainer::ConstIterator itk::SimplexMeshVolumeCalculator< TInputMesh >::InputPointsContainerIterator

Definition at line 79 of file itkSimplexMeshVolumeCalculator.h.

template<class TInputMesh >

typedef InputPointsContainer::ConstPointer itk::SimplexMeshVolumeCalculator< TInputMesh >::InputPointsContainerPointer

Definition at line 78 of file itkSimplexMeshVolumeCalculator.h.

template<class TInputMesh >

typedef InputMeshType::PointType itk::SimplexMeshVolumeCalculator< TInputMesh >::InputPointType

Definition at line 73 of file itkSimplexMeshVolumeCalculator.h.

template<class TInputMesh >

typedef SmartPointer< Self > itk::SimplexMeshVolumeCalculator< TInputMesh >::Pointer

Smart pointer typedef support

Reimplemented from itk::Object.

Definition at line 60 of file itkSimplexMeshVolumeCalculator.h.

template<class TInputMesh >

typedef PointMapType::Pointer itk::SimplexMeshVolumeCalculator< TInputMesh >::PointMapPointer

Definition at line 89 of file itkSimplexMeshVolumeCalculator.h.

template<class TInputMesh >

typedef itk::MapContainer< IdentifierType, InputPointType > itk::SimplexMeshVolumeCalculator< TInputMesh >::PointMapType

Definition at line 88 of file itkSimplexMeshVolumeCalculator.h.

template<class TInputMesh >

typedef SimplexMeshVolumeCalculator itk::SimplexMeshVolumeCalculator< TInputMesh >::Self

Standard "Self" typedef.

Reimplemented from itk::Object.

Definition at line 54 of file itkSimplexMeshVolumeCalculator.h.

template<class TInputMesh >

typedef InputMeshType::CellType itk::SimplexMeshVolumeCalculator< TInputMesh >::SimplexCellType

Definition at line 84 of file itkSimplexMeshVolumeCalculator.h.

template<class TInputMesh >

typedef itk::PolygonCell< SimplexCellType > itk::SimplexMeshVolumeCalculator< TInputMesh >::SimplexPolygonType

Definition at line 85 of file itkSimplexMeshVolumeCalculator.h.

template<class TInputMesh >

typedef SimplexVisitorInterfaceType::Pointer itk::SimplexMeshVolumeCalculator< TInputMesh >::SimplexVisitorInterfacePointer

Definition at line 163 of file itkSimplexMeshVolumeCalculator.h.

template<class TInputMesh >

typedef itk::CellInterfaceVisitorImplementation< InputPixelType, InputCellTraitsType, SimplexPolygonType, SimplexCellVisitor > itk::SimplexMeshVolumeCalculator< TInputMesh >::SimplexVisitorInterfaceType

Definition at line 161 of file itkSimplexMeshVolumeCalculator.h.

template<class TInputMesh >

typedef Object itk::SimplexMeshVolumeCalculator< TInputMesh >::Superclass

Standard "Superclass" typedef.

Reimplemented from itk::Object.

Definition at line 57 of file itkSimplexMeshVolumeCalculator.h.

template<class TInputMesh >

typedef InputPointType::VectorType itk::SimplexMeshVolumeCalculator< TInputMesh >::VectorType

Definition at line 91 of file itkSimplexMeshVolumeCalculator.h.

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Constructor & Destructor Documentation

template<class TInputMesh >

itk::SimplexMeshVolumeCalculator< TInputMesh >::SimplexMeshVolumeCalculator ( )

protected

Return the computed area.

template<class TInputMesh >

virtual itk::SimplexMeshVolumeCalculator< TInputMesh >::~SimplexMeshVolumeCalculator ( )

protectedvirtual

Return the computed area.

template<class TInputMesh >

itk::SimplexMeshVolumeCalculator< TInputMesh >::SimplexMeshVolumeCalculator ( const Self &  )

private

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Member Function Documentation

template<class TInputMesh >

void itk::SimplexMeshVolumeCalculator< TInputMesh >::CalculateTriangleVolume ( InputPointType  p1, InputPointType  p2, InputPointType  p3  )

private

intermediate volume computation

template<class TInputMesh >

void itk::SimplexMeshVolumeCalculator< TInputMesh >::Compute

(

void

)

Compute the volume of the entire simplex mesh.

template<class TInputMesh >

virtual::itk::LightObject::Pointer itk::SimplexMeshVolumeCalculator< TInputMesh >::CreateAnother ( void  ) const

virtual

Create an object from an instance, potentially deferring to a factory. This method allows you to create an instance of an object that is exactly the same type as the referring object. This is useful in cases where an object has been cast back to a base class.

Reimplemented from itk::Object.

template<class TInputMesh >

void itk::SimplexMeshVolumeCalculator< TInputMesh >::CreateTriangles ( )

private

creates dual triangles for all simplex cells

template<class TInputMesh >

void itk::SimplexMeshVolumeCalculator< TInputMesh >::Finalize ( )

private

template<class TInputMesh >

IdentifierType itk::SimplexMeshVolumeCalculator< TInputMesh >::FindCellId ( IdentifierType  id1, IdentifierType  id2, IdentifierType  id3  )

private

part of algorithm

template<class TInputMesh >

virtual double itk::SimplexMeshVolumeCalculator< TInputMesh >::GetArea ( ) const

virtual

Return the computed area.

template<class TInputMesh >

virtual const char* itk::SimplexMeshVolumeCalculator< TInputMesh >::GetNameOfClass ( ) const

virtual

Run-time type information (and related methods).

Reimplemented from itk::Object.

template<class TInputMesh >

virtual double itk::SimplexMeshVolumeCalculator< TInputMesh >::GetVolume ( ) const

virtual

Return the computed volume.

template<class TInputMesh >

void itk::SimplexMeshVolumeCalculator< TInputMesh >::Initialize ( )

private

template<class TInputMesh >

static Pointer itk::SimplexMeshVolumeCalculator< TInputMesh >::New ( )

static

Method of creation through the object factory.

Reimplemented from itk::Object.

template<class TInputMesh >

void itk::SimplexMeshVolumeCalculator< TInputMesh >::operator= ( const Self &  )

private

Mutex lock to protect modification to the reference count

Reimplemented from itk::Object.

template<class TInputMesh >

void itk::SimplexMeshVolumeCalculator< TInputMesh >::PrintSelf ( std::ostream &  os, Indent  indent  ) const

protectedvirtual

Return the computed area.

Reimplemented from itk::Object.

template<class TInputMesh >

virtual void itk::SimplexMeshVolumeCalculator< TInputMesh >::SetSimplexMesh ( InputMeshType *  _arg )

virtual

Set the input mesh.

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Member Data Documentation

template<class TInputMesh >

double itk::SimplexMeshVolumeCalculator< TInputMesh >::m_Area

private

Definition at line 210 of file itkSimplexMeshVolumeCalculator.h.

template<class TInputMesh >

PointMapPointer itk::SimplexMeshVolumeCalculator< TInputMesh >::m_Centers

private

attribute stores the result of the simplex cell visitor

Definition at line 202 of file itkSimplexMeshVolumeCalculator.h.

template<class TInputMesh >

double itk::SimplexMeshVolumeCalculator< TInputMesh >::m_Kx

private

Definition at line 211 of file itkSimplexMeshVolumeCalculator.h.

template<class TInputMesh >

double itk::SimplexMeshVolumeCalculator< TInputMesh >::m_Ky

private

Definition at line 212 of file itkSimplexMeshVolumeCalculator.h.

template<class TInputMesh >

double itk::SimplexMeshVolumeCalculator< TInputMesh >::m_Kz

private

Definition at line 213 of file itkSimplexMeshVolumeCalculator.h.

template<class TInputMesh >

IndexValueType itk::SimplexMeshVolumeCalculator< TInputMesh >::m_Muncx

private

Definition at line 219 of file itkSimplexMeshVolumeCalculator.h.

template<class TInputMesh >

IndexValueType itk::SimplexMeshVolumeCalculator< TInputMesh >::m_Muncy

private

Definition at line 220 of file itkSimplexMeshVolumeCalculator.h.

template<class TInputMesh >

IndexValueType itk::SimplexMeshVolumeCalculator< TInputMesh >::m_Muncz

private

Definition at line 221 of file itkSimplexMeshVolumeCalculator.h.

template<class TInputMesh >

SizeValueType itk::SimplexMeshVolumeCalculator< TInputMesh >::m_NumberOfTriangles

private

Definition at line 223 of file itkSimplexMeshVolumeCalculator.h.

template<class TInputMesh >

InputMeshPointer itk::SimplexMeshVolumeCalculator< TInputMesh >::m_SimplexMesh

private

Definition at line 204 of file itkSimplexMeshVolumeCalculator.h.

template<class TInputMesh >

double itk::SimplexMeshVolumeCalculator< TInputMesh >::m_Volume

private

Definition at line 206 of file itkSimplexMeshVolumeCalculator.h.

template<class TInputMesh >

double itk::SimplexMeshVolumeCalculator< TInputMesh >::m_VolumeX

private

Definition at line 207 of file itkSimplexMeshVolumeCalculator.h.

template<class TInputMesh >

double itk::SimplexMeshVolumeCalculator< TInputMesh >::m_VolumeY

private

Definition at line 208 of file itkSimplexMeshVolumeCalculator.h.

template<class TInputMesh >

double itk::SimplexMeshVolumeCalculator< TInputMesh >::m_VolumeZ

private

Definition at line 209 of file itkSimplexMeshVolumeCalculator.h.

template<class TInputMesh >

double itk::SimplexMeshVolumeCalculator< TInputMesh >::m_Wxy

private

Definition at line 215 of file itkSimplexMeshVolumeCalculator.h.

template<class TInputMesh >

double itk::SimplexMeshVolumeCalculator< TInputMesh >::m_Wxyz

private

Definition at line 214 of file itkSimplexMeshVolumeCalculator.h.

template<class TInputMesh >

double itk::SimplexMeshVolumeCalculator< TInputMesh >::m_Wxz

private

Definition at line 216 of file itkSimplexMeshVolumeCalculator.h.

template<class TInputMesh >

double itk::SimplexMeshVolumeCalculator< TInputMesh >::m_Wyz

private

Definition at line 217 of file itkSimplexMeshVolumeCalculator.h.

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The documentation for this class was generated from the following file:

• itkSimplexMeshVolumeCalculator.h