ITK  4.2.0
Insight Segmentation and Registration Toolkit
Public Types | Public Member Functions | Static Public Member Functions | Static Public Attributes | Protected Member Functions | Private Member Functions | Private Attributes
itk::SparseImage< TNode, VImageDimension > Class Template Reference

#include <itkSparseImage.h>

+ Inheritance diagram for itk::SparseImage< TNode, VImageDimension >:
+ Collaboration diagram for itk::SparseImage< TNode, VImageDimension >:

List of all members.

Public Types

typedef SmartPointer< const SelfConstPointer
typedef WeakPointer< const SelfConstWeakPointer
typedef Superclass::IndexType IndexType
typedef Superclass::IOPixelType IOPixelType
typedef
NeighborhoodAccessorFunctor
< Self
NeighborhoodAccessorFunctorType
typedef SparseFieldLayer
< NodeType
NodeListType
typedef ObjectStore< NodeTypeNodeStoreType
typedef TNode NodeType
typedef SmartPointer< SelfPointer
typedef SparseImage Self
typedef Image< TNode
*, VImageDimension > 
Superclass
- Public Types inherited from itk::Image< TNode *, VImageDimension >
typedef
DefaultPixelAccessorFunctor
< Self
AccessorFunctorType
typedef DefaultPixelAccessor
< PixelType
AccessorType
typedef Superclass::DirectionType DirectionType
typedef Superclass::IndexValueType IndexValueType
typedef TNode * InternalPixelType
typedef Superclass::OffsetType OffsetType
typedef Superclass::OffsetValueType OffsetValueType
typedef ImportImageContainer
< SizeValueType, PixelType
PixelContainer
typedef
PixelContainer::ConstPointer 
PixelContainerConstPointer
typedef PixelContainer::Pointer PixelContainerPointer
typedef TNode * PixelType
typedef Superclass::PointType PointType
typedef Superclass::RegionType RegionType
typedef Superclass::SizeType SizeType
typedef Superclass::SizeValueType SizeValueType
typedef Superclass::SpacingType SpacingType
typedef
Superclass::SpacingValueType 
SpacingValueType
typedef TNode * ValueType
- Public Types inherited from itk::ImageBase< VImageDimension >
typedef double PointValueType
- Public Types inherited from itk::DataObject
typedef std::string DataObjectIdentifierType
typedef std::vector< Pointer >
::size_type 
DataObjectPointerArraySizeType
- Public Types inherited from itk::Object
- Public Types inherited from itk::LightObject

Public Member Functions

virtual ::itk::LightObject::Pointer CreateAnother (void) const
virtual const char * GetNameOfClass () const
NeighborhoodAccessorFunctorType GetNeighborhoodAccessor ()
const
NeighborhoodAccessorFunctorType 
GetNeighborhoodAccessor () const
NodeListTypeGetNodeList ()
virtual void Initialize ()
NodeTypeAddNode (const IndexType &index)
- Public Member Functions inherited from itk::Image< TNode *, VImageDimension >
void Allocate ()
void FillBuffer (const TNode *&value)
virtual unsigned int GetNumberOfComponentsPerPixel () const
const TNode *& GetPixel (const IndexType &index) const
TNode *& GetPixel (const IndexType &index)
AccessorType GetPixelAccessor (void)
const AccessorType GetPixelAccessor (void) const
PixelContainerGetPixelContainer ()
const PixelContainerGetPixelContainer () const
virtual void Graft (const DataObject *data)
TNode *& operator[] (const IndexType &index)
const TNode *& operator[] (const IndexType &index) const
void SetPixel (const IndexType &index, const TNode *&value)
void SetPixelContainer (PixelContainer *container)
virtual TNode ** GetBufferPointer ()
virtual const TNode ** GetBufferPointer () const
- Public Member Functions inherited from itk::ImageBase< VImageDimension >
OffsetValueType ComputeOffset (const IndexType &ind) const
virtual void CopyInformation (const DataObject *data)
virtual const RegionTypeGetBufferedRegion () const
virtual const DirectionTypeGetDirection ()
virtual const DirectionTypeGetInverseDirection ()
virtual const RegionTypeGetLargestPossibleRegion () const
virtual const PointTypeGetOrigin ()
virtual const RegionTypeGetRequestedRegion () const
virtual const SpacingTypeGetSpacing ()
virtual bool RequestedRegionIsOutsideOfTheBufferedRegion ()
virtual void SetBufferedRegion (const RegionType &region)
virtual void SetDirection (const DirectionType direction)
virtual void SetLargestPossibleRegion (const RegionType &region)
virtual void SetRegions (const SizeType &size)
virtual void SetRequestedRegion (const RegionType &region)
virtual void SetRequestedRegion (const DataObject *data)
virtual void SetRequestedRegionToLargestPossibleRegion ()
template<class TCoordRep >
void TransformLocalVectorToPhysicalVector (const FixedArray< TCoordRep, VImageDimension > &inputGradient, FixedArray< TCoordRep, VImageDimension > &outputGradient) const
template<class TCoordRep >
bool TransformPhysicalPointToContinuousIndex (const Point< TCoordRep, VImageDimension > &point, ContinuousIndex< TCoordRep, VImageDimension > &index) const
template<class TCoordRep >
bool TransformPhysicalPointToIndex (const Point< TCoordRep, VImageDimension > &point, IndexType &index) const
template<class TCoordRep >
void TransformPhysicalVectorToLocalVector (const FixedArray< TCoordRep, VImageDimension > &inputGradient, FixedArray< TCoordRep, VImageDimension > &outputGradient) const
virtual void UpdateOutputData ()
virtual void UpdateOutputInformation ()
virtual bool VerifyRequestedRegion ()
virtual void SetOrigin (PointType _arg)
virtual void SetOrigin (const double origin[VImageDimension])
virtual void SetOrigin (const float origin[VImageDimension])
virtual void SetRegions (const RegionType &region)
const OffsetValueTypeGetOffsetTable () const
IndexType ComputeIndex (OffsetValueType offset) const
virtual void SetSpacing (const SpacingType &spacing)
virtual void SetSpacing (const double spacing[VImageDimension])
virtual void SetSpacing (const float spacing[VImageDimension])
template<class TCoordRep >
void TransformContinuousIndexToPhysicalPoint (const ContinuousIndex< TCoordRep, VImageDimension > &index, Point< TCoordRep, VImageDimension > &point) const
template<class TCoordRep >
void TransformIndexToPhysicalPoint (const IndexType &index, Point< TCoordRep, VImageDimension > &point) const
virtual void SetNumberOfComponentsPerPixel (unsigned int)
- Public Member Functions inherited from itk::DataObject
virtual void DataHasBeenGenerated ()
void DisconnectPipeline ()
bool GetDataReleased () const
virtual const bool & GetReleaseDataFlag ()
SmartPointerForwardReference
< ProcessObject
GetSource () const
DataObjectPointerArraySizeType GetSourceOutputIndex () const
const DataObjectIdentifierTypeGetSourceOutputName () const
virtual unsigned long GetUpdateMTime () const
virtual void PrepareForNewData ()
virtual void PropagateRequestedRegion ()
void ReleaseData ()
virtual void ReleaseDataFlagOff ()
virtual void ReleaseDataFlagOn ()
virtual void ResetPipeline ()
void SetReleaseDataFlag (bool flag)
bool ShouldIReleaseData () const
virtual void Update ()
void SetPipelineMTime (unsigned long time)
virtual const unsigned long & GetPipelineMTime ()
virtual void SetRealTimeStamp (RealTimeStamp _arg)
virtual const RealTimeStampGetRealTimeStamp ()
- Public Member Functions inherited from itk::Object
unsigned long AddObserver (const EventObject &event, Command *)
unsigned long AddObserver (const EventObject &event, Command *) const
virtual void DebugOff () const
virtual void DebugOn () const
CommandGetCommand (unsigned long tag)
bool GetDebug () const
MetaDataDictionaryGetMetaDataDictionary (void)
const MetaDataDictionaryGetMetaDataDictionary (void) const
virtual unsigned long GetMTime () const
virtual const TimeStampGetTimeStamp () const
bool HasObserver (const EventObject &event) const
void InvokeEvent (const EventObject &)
void InvokeEvent (const EventObject &) const
virtual void Modified () const
virtual void Register () const
void RemoveAllObservers ()
void RemoveObserver (unsigned long tag)
void SetDebug (bool debugFlag) const
void SetMetaDataDictionary (const MetaDataDictionary &rhs)
virtual void SetReferenceCount (int)
virtual void UnRegister () const
- Public Member Functions inherited from itk::LightObject
virtual void Delete ()
virtual int GetReferenceCount () const
 itkCloneMacro (Self)
void Print (std::ostream &os, Indent indent=0) const

Static Public Member Functions

static Pointer New ()

Static Public Attributes

static const unsigned int ImageDimension = Superclass::ImageDimension
- Static Public Attributes inherited from itk::Image< TNode *, VImageDimension >
- Static Public Attributes inherited from itk::ImageBase< VImageDimension >

Protected Member Functions

void PrintSelf (std::ostream &os, Indent indent) const
 SparseImage ()
 ~SparseImage ()
- Protected Member Functions inherited from itk::Image< TNode *, VImageDimension >
virtual void ComputeIndexToPhysicalPointMatrices ()
 Image ()
virtual ~Image ()
- Protected Member Functions inherited from itk::ImageBase< VImageDimension >
void ComputeOffsetTable ()
 ImageBase ()
virtual void InitializeBufferedRegion (void)
 ~ImageBase ()
- Protected Member Functions inherited from itk::DataObject
virtual void PropagateResetPipeline ()
 DataObject ()
 ~DataObject ()
- Protected Member Functions inherited from itk::Object
 Object ()
bool PrintObservers (std::ostream &os, Indent indent) const
virtual void SetTimeStamp (const TimeStamp &time)
virtual ~Object ()
- Protected Member Functions inherited from itk::LightObject
virtual LightObject::Pointer InternalClone () const
 LightObject ()
virtual void PrintHeader (std::ostream &os, Indent indent) const
virtual void PrintTrailer (std::ostream &os, Indent indent) const
virtual ~LightObject ()

Private Member Functions

void operator= (const Self &)
 SparseImage (const Self &)

Private Attributes

NodeListType::Pointer m_NodeList
NodeStoreType::Pointer m_NodeStore

Detailed Description

template<class TNode, unsigned int VImageDimension = 2>
class itk::SparseImage< TNode, VImageDimension >

A storage type for sparse image data.

This class is derived from the Image class. It uses the base class image data for storing pointers to variables of type TNode. The node type must have a member variable m_Index. The node data is stored using the SparseFieldLayer and ObjectStore classes to allow sequential list access to the nodes. This functionality is used in filter classes that process the SparseImage class such as FiniteDifferenceSparseImageFilter. The node type must also have members NodeType* Next and NodeType* Previous. A minimal node class which could be used to create the sparse equivalent of an itk::Image<unsigned char, 2> is shown below:
struct NodeType
{
NodeType* Next;
NodeType* Previous;
ImageType::IndexType m_Index;
unsigned char m_Data;
};
typedef itk::SparseImage<NodeType, 2> SparseImageType;
This class provides the method AddNode which allocates a node variable, associates it with the image pixel index (sets m_Index in the node variable) and returns the pointer to the node variable. It is suggested that the user call the FillBuffer method to initialize the image to null pointers before any calls to AddNode. This would allow the user later to distinguish between valid and non-valid pixels.

Definition at line 67 of file itkSparseImage.h.


Member Typedef Documentation

template<class TNode , unsigned int VImageDimension = 2>
typedef SmartPointer< const Self > itk::SparseImage< TNode, VImageDimension >::ConstPointer

Reimplemented from itk::Image< TNode *, VImageDimension >.

Definition at line 74 of file itkSparseImage.h.

template<class TNode , unsigned int VImageDimension = 2>
typedef WeakPointer< const Self > itk::SparseImage< TNode, VImageDimension >::ConstWeakPointer

Reimplemented from itk::Image< TNode *, VImageDimension >.

Definition at line 75 of file itkSparseImage.h.

template<class TNode , unsigned int VImageDimension = 2>
typedef Superclass::IndexType itk::SparseImage< TNode, VImageDimension >::IndexType

Types derived from the Superclass

Reimplemented from itk::Image< TNode *, VImageDimension >.

Definition at line 91 of file itkSparseImage.h.

template<class TNode , unsigned int VImageDimension = 2>
typedef Superclass::IOPixelType itk::SparseImage< TNode, VImageDimension >::IOPixelType

Reimplemented from itk::Image< TNode *, VImageDimension >.

Definition at line 98 of file itkSparseImage.h.

template<class TNode , unsigned int VImageDimension = 2>
typedef NeighborhoodAccessorFunctor< Self > itk::SparseImage< TNode, VImageDimension >::NeighborhoodAccessorFunctorType

Tyepdef for the functor used to access a neighborhood of pixel pointers.

Reimplemented from itk::Image< TNode *, VImageDimension >.

Definition at line 96 of file itkSparseImage.h.

template<class TNode , unsigned int VImageDimension = 2>
typedef SparseFieldLayer< NodeType > itk::SparseImage< TNode, VImageDimension >::NodeListType

The list types for storing the active pixels.

Definition at line 101 of file itkSparseImage.h.

template<class TNode , unsigned int VImageDimension = 2>
typedef ObjectStore< NodeType > itk::SparseImage< TNode, VImageDimension >::NodeStoreType

Definition at line 102 of file itkSparseImage.h.

template<class TNode , unsigned int VImageDimension = 2>
typedef TNode itk::SparseImage< TNode, VImageDimension >::NodeType

The actual sparse pixel type.

Definition at line 88 of file itkSparseImage.h.

template<class TNode , unsigned int VImageDimension = 2>
typedef SmartPointer< Self > itk::SparseImage< TNode, VImageDimension >::Pointer

Reimplemented from itk::Image< TNode *, VImageDimension >.

Definition at line 73 of file itkSparseImage.h.

template<class TNode , unsigned int VImageDimension = 2>
typedef SparseImage itk::SparseImage< TNode, VImageDimension >::Self

Standard typedefs.

Reimplemented from itk::Image< TNode *, VImageDimension >.

Definition at line 71 of file itkSparseImage.h.

template<class TNode , unsigned int VImageDimension = 2>
typedef Image< TNode *, VImageDimension > itk::SparseImage< TNode, VImageDimension >::Superclass

Reimplemented from itk::Image< TNode *, VImageDimension >.

Definition at line 72 of file itkSparseImage.h.


Constructor & Destructor Documentation

template<class TNode , unsigned int VImageDimension = 2>
itk::SparseImage< TNode, VImageDimension >::SparseImage ( )
protected
template<class TNode , unsigned int VImageDimension = 2>
itk::SparseImage< TNode, VImageDimension >::~SparseImage ( )
inlineprotected

Definition at line 139 of file itkSparseImage.h.

template<class TNode , unsigned int VImageDimension = 2>
itk::SparseImage< TNode, VImageDimension >::SparseImage ( const Self )
private

Member Function Documentation

template<class TNode , unsigned int VImageDimension = 2>
NodeType* itk::SparseImage< TNode, VImageDimension >::AddNode ( const IndexType index)
inline

This function should be used to allocate memory for a variable at the desired pixel location.

Definition at line 116 of file itkSparseImage.h.

template<class TNode , unsigned int VImageDimension = 2>
virtual::itk::LightObject::Pointer itk::SparseImage< TNode, VImageDimension >::CreateAnother ( void  ) const
virtual

Create an object from an instance, potentially deferring to a factory. This method allows you to create an instance of an object that is exactly the same type as the referring object. This is useful in cases where an object has been cast back to a base class.

Reimplemented from itk::Image< TNode *, VImageDimension >.

template<class TNode , unsigned int VImageDimension = 2>
virtual const char* itk::SparseImage< TNode, VImageDimension >::GetNameOfClass ( ) const
virtual

Run-time type information (and related methods).

Reimplemented from itk::Image< TNode *, VImageDimension >.

template<class TNode , unsigned int VImageDimension = 2>
NeighborhoodAccessorFunctorType itk::SparseImage< TNode, VImageDimension >::GetNeighborhoodAccessor ( )
inline

Return the NeighborhoodAccessor functor. This method is called by the neighborhood iterators.

Reimplemented from itk::Image< TNode *, VImageDimension >.

Definition at line 106 of file itkSparseImage.h.

template<class TNode , unsigned int VImageDimension = 2>
const NeighborhoodAccessorFunctorType itk::SparseImage< TNode, VImageDimension >::GetNeighborhoodAccessor ( ) const
inline

Return the NeighborhoodAccessor functor. This method is called by the neighborhood iterators.

Reimplemented from itk::Image< TNode *, VImageDimension >.

Definition at line 111 of file itkSparseImage.h.

template<class TNode , unsigned int VImageDimension = 2>
NodeListType* itk::SparseImage< TNode, VImageDimension >::GetNodeList ( )
inline

This function returns the allocated node list which can be used to iterate through the valid nodes.

Definition at line 128 of file itkSparseImage.h.

template<class TNode , unsigned int VImageDimension = 2>
virtual void itk::SparseImage< TNode, VImageDimension >::Initialize ( )
virtual

This function initializes the m_NodeList and m_NodeStore variables, and calls the superclass Initialize method.

Reimplemented from itk::Image< TNode *, VImageDimension >.

template<class TNode , unsigned int VImageDimension = 2>
static Pointer itk::SparseImage< TNode, VImageDimension >::New ( )
static

Method for creation through the object factory.

Reimplemented from itk::Image< TNode *, VImageDimension >.

template<class TNode , unsigned int VImageDimension = 2>
void itk::SparseImage< TNode, VImageDimension >::operator= ( const Self )
private
template<class TNode , unsigned int VImageDimension = 2>
void itk::SparseImage< TNode, VImageDimension >::PrintSelf ( std::ostream &  os,
Indent  indent 
) const
protectedvirtual

Method for grafting the content of one data object into another one. This method is intended to be overloaded by derived classes. Each one of them should use dynamic_casting in order to verify that the grafted object is actually of the same type as the class on which the Graft() method was invoked.

Reimplemented from itk::Image< TNode *, VImageDimension >.


Member Data Documentation

template<class TNode , unsigned int VImageDimension = 2>
const unsigned int itk::SparseImage< TNode, VImageDimension >::ImageDimension = Superclass::ImageDimension
static

Dimension of the image.

Reimplemented from itk::Image< TNode *, VImageDimension >.

Definition at line 85 of file itkSparseImage.h.

template<class TNode , unsigned int VImageDimension = 2>
NodeListType::Pointer itk::SparseImage< TNode, VImageDimension >::m_NodeList
private

The variables for storing the node variables.

Definition at line 145 of file itkSparseImage.h.

template<class TNode , unsigned int VImageDimension = 2>
NodeStoreType::Pointer itk::SparseImage< TNode, VImageDimension >::m_NodeStore
private

Definition at line 147 of file itkSparseImage.h.


The documentation for this class was generated from the following file: