ITK  4.2.0
Insight Segmentation and Registration Toolkit
Public Types | Public Member Functions | Static Public Member Functions | Static Public Attributes | Protected Member Functions | Protected Attributes | Private Member Functions | Private Attributes
itk::TimeVaryingVelocityFieldIntegrationImageFilter< TTimeVaryingVelocityField, TDisplacementField > Class Template Reference
Module ITKDisplacementField

#include <itkTimeVaryingVelocityFieldIntegrationImageFilter.h>

+ Inheritance diagram for itk::TimeVaryingVelocityFieldIntegrationImageFilter< TTimeVaryingVelocityField, TDisplacementField >:
+ Collaboration diagram for itk::TimeVaryingVelocityFieldIntegrationImageFilter< TTimeVaryingVelocityField, TDisplacementField >:

List of all members.

Public Types

typedef SmartPointer< const Self > ConstPointer
typedef
DisplacementFieldInterpolatorType::Pointer 		DisplacementFieldInterpolatorPointer
typedef
VectorInterpolateImageFunction
< DisplacementFieldType,
RealType > 		DisplacementFieldInterpolatorType
typedef
DisplacementFieldType::Pointer 		DisplacementFieldPointer
typedef TDisplacementField DisplacementFieldType
typedef
DisplacementFieldType::RegionType 		OutputRegionType
typedef SmartPointer< Self > Pointer
typedef
DisplacementFieldType::PointType 		PointType
typedef VectorType::RealValueType RealType
typedef
TimeVaryingVelocityFieldIntegrationImageFilter 		Self
typedef ImageToImageFilter
< TTimeVaryingVelocityField,
TDisplacementField > 		Superclass
typedef TTimeVaryingVelocityField TimeVaryingVelocityFieldType
typedef
DisplacementFieldType::PixelType 		VectorType
typedef
VelocityFieldInterpolatorType::Pointer 		VelocityFieldInterpolatorPointer
typedef
VectorInterpolateImageFunction
< TimeVaryingVelocityFieldType,
RealType > 		VelocityFieldInterpolatorType
- Public Types inherited from itk::ImageToImageFilter< TTimeVaryingVelocityField, TDisplacementField >
typedef
InputImageType::ConstPointer 		InputImageConstPointer
typedef InputImageType::PixelType InputImagePixelType
typedef InputImageType::Pointer InputImagePointer
typedef InputImageType::RegionType InputImageRegionType
typedef TTimeVaryingVelocityField InputImageType
typedef
Superclass::OutputImagePixelType 		OutputImagePixelType
typedef
Superclass::OutputImageRegionType 		OutputImageRegionType
- Public Types inherited from itk::ImageSource< TDisplacementField >
typedef
Superclass::DataObjectIdentifierType 		DataObjectIdentifierType
typedef DataObject::Pointer DataObjectPointer
typedef
Superclass::DataObjectPointerArraySizeType 		DataObjectPointerArraySizeType
typedef OutputImageType::Pointer OutputImagePointer
typedef TDisplacementField OutputImageType
- Public Types inherited from itk::ProcessObject
typedef std::vector
< DataObjectPointer > 		DataObjectPointerArray
typedef std::vector
< DataObjectIdentifierType > 		NameArray
- Public Types inherited from itk::Object
- Public Types inherited from itk::LightObject

Public Member Functions

virtual ::itk::LightObject::Pointer CreateAnother (void) const
virtual
DisplacementFieldInterpolatorType * 		GetDisplacementFieldInterpolator ()
virtual DisplacementFieldType * GetInitialDiffeomorphism ()
virtual RealType GetLowerTimeBound () const
virtual const char * GetNameOfClass () const
virtual unsigned int GetNumberOfIntegrationSteps () const
virtual RealType GetUpperTimeBound () const
virtual
VelocityFieldInterpolatorType * 		GetVelocityFieldInterpolator ()
virtual void SetDisplacementFieldInterpolator (DisplacementFieldInterpolatorType *_arg)
virtual void SetInitialDiffeomorphism (DisplacementFieldType *_arg)
virtual void SetLowerTimeBound (RealType _arg)
virtual void SetNumberOfIntegrationSteps (unsigned int _arg)
virtual void SetUpperTimeBound (RealType _arg)
virtual void SetVelocityFieldInterpolator (VelocityFieldInterpolatorType *_arg)
- Public Member Functions inherited from itk::ImageToImageFilter< TTimeVaryingVelocityField, TDisplacementField >
const InputImageType * GetInput (void) const
const InputImageType * GetInput (unsigned int idx) const
virtual void PopBackInput ()
virtual void PopFrontInput ()
virtual void PushBackInput (const InputImageType *image)
virtual void PushFrontInput (const InputImageType *image)
virtual void SetInput (const InputImageType *image)
virtual void SetInput (unsigned int, const TTimeVaryingVelocityField *image)
- Public Member Functions inherited from itk::ImageSource< TDisplacementField >
OutputImageType * GetOutput (unsigned int idx)
virtual void GraftNthOutput (unsigned int idx, DataObject *output)
virtual void GraftOutput (DataObject *output)
virtual void GraftOutput (const DataObjectIdentifierType &key, DataObject *output)
OutputImageType * GetOutput (void)
const OutputImageType * GetOutput (void) const
virtual
ProcessObject::DataObjectPointer 		MakeOutput (ProcessObject::DataObjectPointerArraySizeType idx)
- Public Member Functions inherited from itk::ProcessObject
virtual void AbortGenerateDataOff ()
virtual void AbortGenerateDataOn ()
virtual void EnlargeOutputRequestedRegion (DataObject *)
virtual const bool & GetAbortGenerateData ()
NameArray GetInputNames () const
MultiThreader * GetMultiThreader () const
DataObjectPointerArraySizeType GetNumberOfIndexedInputs () const
DataObjectPointerArraySizeType GetNumberOfInputs () const
DataObjectPointerArraySizeType GetNumberOfOutputs () const
virtual
DataObjectPointerArraySizeType 		GetNumberOfValidRequiredInputs () const
NameArray GetOutputNames () const
virtual const float & GetProgress ()
NameArray GetRequiredInputNames () const
bool HasInput (const DataObjectIdentifierType &key) const
bool HasOutput (const DataObjectIdentifierType &key) const
virtual DataObjectPointer MakeOutput (const DataObjectIdentifierType &)
virtual void PrepareOutputs ()
virtual void PropagateRequestedRegion (DataObject *output)
virtual void ResetPipeline ()
virtual void SetAbortGenerateData (bool _arg)
virtual void SetProgress (float _arg)
virtual void Update ()
virtual void UpdateLargestPossibleRegion ()
virtual void UpdateOutputData (DataObject *output)
virtual void UpdateOutputInformation ()
void UpdateProgress (float amount)
DataObjectPointerArray GetInputs ()
DataObjectPointerArray GetOutputs ()
DataObjectPointerArray GetIndexedInputs ()
DataObjectPointerArray GetIndexedOutputs ()
DataObjectPointerArraySizeType GetNumberOfIndexedOutputs () const
virtual void SetReleaseDataFlag (bool flag)
virtual bool GetReleaseDataFlag () const
void ReleaseDataFlagOn ()
void ReleaseDataFlagOff ()
virtual void SetReleaseDataBeforeUpdateFlag (bool _arg)
virtual const bool & GetReleaseDataBeforeUpdateFlag ()
virtual void ReleaseDataBeforeUpdateFlagOn ()
virtual void ReleaseDataBeforeUpdateFlagOff ()
virtual void SetNumberOfThreads (ThreadIdType _arg)
virtual const ThreadIdType & GetNumberOfThreads ()
- Public Member Functions inherited from itk::Object
unsigned long AddObserver (const EventObject &event, Command *)
unsigned long AddObserver (const EventObject &event, Command *) const
virtual void DebugOff () const
virtual void DebugOn () const
Command * GetCommand (unsigned long tag)
bool GetDebug () const
MetaDataDictionary & GetMetaDataDictionary (void)
const MetaDataDictionary & GetMetaDataDictionary (void) const
virtual unsigned long GetMTime () const
virtual const TimeStamp & GetTimeStamp () const
bool HasObserver (const EventObject &event) const
void InvokeEvent (const EventObject &)
void InvokeEvent (const EventObject &) const
virtual void Modified () const
virtual void Register () const
void RemoveAllObservers ()
void RemoveObserver (unsigned long tag)
void SetDebug (bool debugFlag) const
void SetMetaDataDictionary (const MetaDataDictionary &rhs)
virtual void SetReferenceCount (int)
virtual void UnRegister () const
- Public Member Functions inherited from itk::LightObject
virtual void Delete ()
virtual int GetReferenceCount () const
 itkCloneMacro (Self)
void Print (std::ostream &os, Indent indent=0) const

Static Public Member Functions

static Pointer New ()

Static Public Attributes

static const unsigned int InputImageDimension = TTimeVaryingVelocityField::ImageDimension
static const unsigned int OutputImageDimension = TDisplacementField::ImageDimension
- Static Public Attributes inherited from itk::ImageToImageFilter< TTimeVaryingVelocityField, TDisplacementField >
- Static Public Attributes inherited from itk::ImageSource< TDisplacementField >

Protected Member Functions

virtual void BeforeThreadedGenerateData ()
virtual void GenerateOutputInformation ()
VectorType IntegrateVelocityAtPoint (const PointType &)
void PrintSelf (std::ostream &os, Indent indent) const
virtual void ThreadedGenerateData (const OutputRegionType &, ThreadIdType)
 TimeVaryingVelocityFieldIntegrationImageFilter ()
 ~TimeVaryingVelocityFieldIntegrationImageFilter ()
- Protected Member Functions inherited from itk::ImageToImageFilter< TTimeVaryingVelocityField, TDisplacementField >
virtual void CallCopyInputRegionToOutputRegion (OutputImageRegionType &destRegion, const InputImageRegionType &srcRegion)
virtual void CallCopyOutputRegionToInputRegion (InputImageRegionType &destRegion, const OutputImageRegionType &srcRegion)
virtual void GenerateInputRequestedRegion ()
 ImageToImageFilter ()
virtual void VerifyInputInformation ()
 ~ImageToImageFilter ()
void PushBackInput (const DataObject *input)
void PushFrontInput (const DataObject *input)
- Protected Member Functions inherited from itk::ImageSource< TDisplacementField >
virtual void AfterThreadedGenerateData ()
virtual void AllocateOutputs ()
virtual void GenerateData ()
 ImageSource ()
virtual unsigned int SplitRequestedRegion (unsigned int i, unsigned int num, OutputImageRegionType &splitRegion)
virtual void ThreadedGenerateData (const OutputImageRegionType &outputRegionForThread, ThreadIdType threadId)
virtual ~ImageSource ()
- Protected Member Functions inherited from itk::ProcessObject
virtual void AddInput (DataObject *input)
virtual void AddOutput (DataObject *output)
bool AddRequiredInputName (const DataObjectIdentifierType &)
virtual void CacheInputReleaseDataFlags ()
virtual void GenerateOutputRequestedRegion (DataObject *output)
virtual const
DataObjectPointerArraySizeType & 		GetNumberOfRequiredInputs ()
virtual const
DataObjectPointerArraySizeType & 		GetNumberOfRequiredOutputs ()
bool IsIndexedName (const DataObjectIdentifierType &) const
bool IsRequiredInputName (const DataObjectIdentifierType &) const
 itkLegacyMacro (virtual void RemoveInput(DataObject *input))
 itkLegacyMacro (virtual void RemoveOutput(DataObject *output))
 itkLegacyMacro (void SetNumberOfInputs(DataObjectPointerArraySizeType num))
 itkLegacyMacro (void SetNumberOfOutputs(DataObjectPointerArraySizeType num))
DataObjectPointerArraySizeType MakeIndexFromName (const DataObjectIdentifierType &) const
DataObjectIdentifierType MakeNameFromIndex (DataObjectPointerArraySizeType) const
 ProcessObject ()
virtual void PropagateResetPipeline ()
virtual void ReleaseInputs ()
virtual void RemoveInput (const DataObjectIdentifierType &key)
virtual void RemoveInput (DataObjectPointerArraySizeType)
virtual void RemoveOutput (const DataObjectIdentifierType &key)
virtual void RemoveOutput (DataObjectPointerArraySizeType idx)
bool RemoveRequiredInputName (const DataObjectIdentifierType &)
virtual void RestoreInputReleaseDataFlags ()
virtual void SetInput (const DataObjectIdentifierType &key, DataObject *input)
virtual void SetNthInput (DataObjectPointerArraySizeType num, DataObject *input)
virtual void SetNthOutput (DataObjectPointerArraySizeType num, DataObject *output)
void SetNumberOfIndexedInputs (DataObjectPointerArraySizeType num)
void SetNumberOfIndexedOutputs (DataObjectPointerArraySizeType num)
virtual void SetNumberOfRequiredInputs (DataObjectPointerArraySizeType)
virtual void SetNumberOfRequiredOutputs (DataObjectPointerArraySizeType _arg)
virtual void SetOutput (const DataObjectIdentifierType &key, DataObject *output)
virtual void SetPrimaryInput (DataObject *input)
virtual void SetPrimaryOutput (DataObject *output)
void SetRequiredInputNames (const NameArray &)
virtual void VerifyPreconditions ()
 ~ProcessObject ()
DataObject * GetInput (const DataObjectIdentifierType &key)
const DataObject * GetInput (const DataObjectIdentifierType &key) const
DataObject * GetInput (DataObjectPointerArraySizeType)
const DataObject * GetInput (DataObjectPointerArraySizeType idx) const
DataObject * GetPrimaryInput ()
const DataObject * GetPrimaryInput () const
DataObject * GetOutput (const DataObjectIdentifierType &key)
const DataObject * GetOutput (const DataObjectIdentifierType &key) const
DataObject * GetOutput (DataObjectPointerArraySizeType idx)
const DataObject * GetOutput (DataObjectPointerArraySizeType idx) const
DataObject * GetPrimaryOutput ()
const DataObject * GetPrimaryOutput () const
- Protected Member Functions inherited from itk::Object
 Object ()
bool PrintObservers (std::ostream &os, Indent indent) const
virtual void SetTimeStamp (const TimeStamp &time)
virtual ~Object ()
- Protected Member Functions inherited from itk::LightObject
virtual LightObject::Pointer InternalClone () const
 LightObject ()
virtual void PrintHeader (std::ostream &os, Indent indent) const
virtual void PrintTrailer (std::ostream &os, Indent indent) const
virtual ~LightObject ()

Protected Attributes

DisplacementFieldInterpolatorPointer m_DisplacementFieldInterpolator
DisplacementFieldPointer m_InitialDiffeomorphism
RealType m_LowerTimeBound
unsigned int m_NumberOfIntegrationSteps
unsigned int m_NumberOfTimePoints
RealType m_UpperTimeBound

Private Member Functions

void operator= (const Self &)
 TimeVaryingVelocityFieldIntegrationImageFilter (const Self &)

Private Attributes

VelocityFieldInterpolatorPointer m_VelocityFieldInterpolator

Additional Inherited Members

- Protected Types inherited from itk::ImageToImageFilter< TTimeVaryingVelocityField, TDisplacementField >
typedef
ImageToImageFilterDetail::ImageRegionCopier
< itkGetStaticConstMacro(OutputImageDimension),
itkGetStaticConstMacro(InputImageDimension) > 		InputToOutputRegionCopierType
typedef
ImageToImageFilterDetail::ImageRegionCopier
< itkGetStaticConstMacro(InputImageDimension),
itkGetStaticConstMacro(OutputImageDimension) > 		OutputToInputRegionCopierType

Detailed Description

template<class TTimeVaryingVelocityField, class TDisplacementField = Image<typename TTimeVaryingVelocityField::PixelType, GetImageDimension<TTimeVaryingVelocityField>::ImageDimension - 1>>
class itk::TimeVaryingVelocityFieldIntegrationImageFilter< TTimeVaryingVelocityField, TDisplacementField >

Integrate a time-varying velocity field using 4th order Runge-Kutta.

Diffeomorphisms are topology-preserving mappings that are useful for describing biologically plausible deformations. Mathematically, a diffeomorphism, $ \phi $, is generated from a time-varying velocity field, v, as described by the integral equation:

\[ \phi(t_b) = \phi(t_a) + \int_t_a^t_b v(\phi(t),t) dt \]

In this class, the input is the time-varying velocity field and an initial diffeomorophism. The output diffeomorphism is produced using fourth order Runge-Kutta.

Warning:
The output deformation field needs to have dimensionality of 1 less than the input time-varying velocity field.
Author:
Nick Tustison
Brian Avants

Definition at line 55 of file itkTimeVaryingVelocityFieldIntegrationImageFilter.h.

Member Typedef Documentation

template<class TTimeVaryingVelocityField , class TDisplacementField = Image<typename TTimeVaryingVelocityField::PixelType, GetImageDimension<TTimeVaryingVelocityField>::ImageDimension - 1>>
typedef SmartPointer<const Self> itk::TimeVaryingVelocityFieldIntegrationImageFilter< TTimeVaryingVelocityField, TDisplacementField >::ConstPointer

Reimplemented from itk::ImageToImageFilter< TTimeVaryingVelocityField, TDisplacementField >.

Definition at line 63 of file itkTimeVaryingVelocityFieldIntegrationImageFilter.h.

template<class TTimeVaryingVelocityField , class TDisplacementField = Image<typename TTimeVaryingVelocityField::PixelType, GetImageDimension<TTimeVaryingVelocityField>::ImageDimension - 1>>
typedef DisplacementFieldInterpolatorType::Pointer itk::TimeVaryingVelocityFieldIntegrationImageFilter< TTimeVaryingVelocityField, TDisplacementField >::DisplacementFieldInterpolatorPointer

Definition at line 94 of file itkTimeVaryingVelocityFieldIntegrationImageFilter.h.

template<class TTimeVaryingVelocityField , class TDisplacementField = Image<typename TTimeVaryingVelocityField::PixelType, GetImageDimension<TTimeVaryingVelocityField>::ImageDimension - 1>>
typedef VectorInterpolateImageFunction<DisplacementFieldType, RealType> itk::TimeVaryingVelocityFieldIntegrationImageFilter< TTimeVaryingVelocityField, TDisplacementField >::DisplacementFieldInterpolatorType

Definition at line 93 of file itkTimeVaryingVelocityFieldIntegrationImageFilter.h.

template<class TTimeVaryingVelocityField , class TDisplacementField = Image<typename TTimeVaryingVelocityField::PixelType, GetImageDimension<TTimeVaryingVelocityField>::ImageDimension - 1>>
typedef DisplacementFieldType::Pointer itk::TimeVaryingVelocityFieldIntegrationImageFilter< TTimeVaryingVelocityField, TDisplacementField >::DisplacementFieldPointer

Definition at line 82 of file itkTimeVaryingVelocityFieldIntegrationImageFilter.h.

template<class TTimeVaryingVelocityField , class TDisplacementField = Image<typename TTimeVaryingVelocityField::PixelType, GetImageDimension<TTimeVaryingVelocityField>::ImageDimension - 1>>
typedef TDisplacementField itk::TimeVaryingVelocityFieldIntegrationImageFilter< TTimeVaryingVelocityField, TDisplacementField >::DisplacementFieldType

Definition at line 81 of file itkTimeVaryingVelocityFieldIntegrationImageFilter.h.

template<class TTimeVaryingVelocityField , class TDisplacementField = Image<typename TTimeVaryingVelocityField::PixelType, GetImageDimension<TTimeVaryingVelocityField>::ImageDimension - 1>>
typedef DisplacementFieldType::RegionType itk::TimeVaryingVelocityFieldIntegrationImageFilter< TTimeVaryingVelocityField, TDisplacementField >::OutputRegionType

Definition at line 86 of file itkTimeVaryingVelocityFieldIntegrationImageFilter.h.

template<class TTimeVaryingVelocityField , class TDisplacementField = Image<typename TTimeVaryingVelocityField::PixelType, GetImageDimension<TTimeVaryingVelocityField>::ImageDimension - 1>>
typedef SmartPointer<Self> itk::TimeVaryingVelocityFieldIntegrationImageFilter< TTimeVaryingVelocityField, TDisplacementField >::Pointer

Reimplemented from itk::ImageToImageFilter< TTimeVaryingVelocityField, TDisplacementField >.

Definition at line 62 of file itkTimeVaryingVelocityFieldIntegrationImageFilter.h.

template<class TTimeVaryingVelocityField , class TDisplacementField = Image<typename TTimeVaryingVelocityField::PixelType, GetImageDimension<TTimeVaryingVelocityField>::ImageDimension - 1>>
typedef DisplacementFieldType::PointType itk::TimeVaryingVelocityFieldIntegrationImageFilter< TTimeVaryingVelocityField, TDisplacementField >::PointType

Definition at line 85 of file itkTimeVaryingVelocityFieldIntegrationImageFilter.h.

template<class TTimeVaryingVelocityField , class TDisplacementField = Image<typename TTimeVaryingVelocityField::PixelType, GetImageDimension<TTimeVaryingVelocityField>::ImageDimension - 1>>
typedef VectorType::RealValueType itk::TimeVaryingVelocityFieldIntegrationImageFilter< TTimeVaryingVelocityField, TDisplacementField >::RealType

Definition at line 84 of file itkTimeVaryingVelocityFieldIntegrationImageFilter.h.

template<class TTimeVaryingVelocityField , class TDisplacementField = Image<typename TTimeVaryingVelocityField::PixelType, GetImageDimension<TTimeVaryingVelocityField>::ImageDimension - 1>>
typedef TimeVaryingVelocityFieldIntegrationImageFilter itk::TimeVaryingVelocityFieldIntegrationImageFilter< TTimeVaryingVelocityField, TDisplacementField >::Self

Standard class typedefs.

Reimplemented from itk::ImageToImageFilter< TTimeVaryingVelocityField, TDisplacementField >.

Definition at line 59 of file itkTimeVaryingVelocityFieldIntegrationImageFilter.h.

template<class TTimeVaryingVelocityField , class TDisplacementField = Image<typename TTimeVaryingVelocityField::PixelType, GetImageDimension<TTimeVaryingVelocityField>::ImageDimension - 1>>
typedef ImageToImageFilter<TTimeVaryingVelocityField, TDisplacementField> itk::TimeVaryingVelocityFieldIntegrationImageFilter< TTimeVaryingVelocityField, TDisplacementField >::Superclass

Reimplemented from itk::ImageToImageFilter< TTimeVaryingVelocityField, TDisplacementField >.

Definition at line 61 of file itkTimeVaryingVelocityFieldIntegrationImageFilter.h.

template<class TTimeVaryingVelocityField , class TDisplacementField = Image<typename TTimeVaryingVelocityField::PixelType, GetImageDimension<TTimeVaryingVelocityField>::ImageDimension - 1>>
typedef TTimeVaryingVelocityField itk::TimeVaryingVelocityFieldIntegrationImageFilter< TTimeVaryingVelocityField, TDisplacementField >::TimeVaryingVelocityFieldType

Definition at line 80 of file itkTimeVaryingVelocityFieldIntegrationImageFilter.h.

template<class TTimeVaryingVelocityField , class TDisplacementField = Image<typename TTimeVaryingVelocityField::PixelType, GetImageDimension<TTimeVaryingVelocityField>::ImageDimension - 1>>
typedef DisplacementFieldType::PixelType itk::TimeVaryingVelocityFieldIntegrationImageFilter< TTimeVaryingVelocityField, TDisplacementField >::VectorType

Definition at line 83 of file itkTimeVaryingVelocityFieldIntegrationImageFilter.h.

template<class TTimeVaryingVelocityField , class TDisplacementField = Image<typename TTimeVaryingVelocityField::PixelType, GetImageDimension<TTimeVaryingVelocityField>::ImageDimension - 1>>
typedef VelocityFieldInterpolatorType::Pointer itk::TimeVaryingVelocityFieldIntegrationImageFilter< TTimeVaryingVelocityField, TDisplacementField >::VelocityFieldInterpolatorPointer

Definition at line 91 of file itkTimeVaryingVelocityFieldIntegrationImageFilter.h.

template<class TTimeVaryingVelocityField , class TDisplacementField = Image<typename TTimeVaryingVelocityField::PixelType, GetImageDimension<TTimeVaryingVelocityField>::ImageDimension - 1>>
typedef VectorInterpolateImageFunction<TimeVaryingVelocityFieldType, RealType> itk::TimeVaryingVelocityFieldIntegrationImageFilter< TTimeVaryingVelocityField, TDisplacementField >::VelocityFieldInterpolatorType

Definition at line 89 of file itkTimeVaryingVelocityFieldIntegrationImageFilter.h.

Constructor & Destructor Documentation

template<class TTimeVaryingVelocityField , class TDisplacementField = Image<typename TTimeVaryingVelocityField::PixelType, GetImageDimension<TTimeVaryingVelocityField>::ImageDimension - 1>>
itk::TimeVaryingVelocityFieldIntegrationImageFilter< TTimeVaryingVelocityField, TDisplacementField >::TimeVaryingVelocityFieldIntegrationImageFilter ( )
protected
template<class TTimeVaryingVelocityField , class TDisplacementField = Image<typename TTimeVaryingVelocityField::PixelType, GetImageDimension<TTimeVaryingVelocityField>::ImageDimension - 1>>
itk::TimeVaryingVelocityFieldIntegrationImageFilter< TTimeVaryingVelocityField, TDisplacementField >::~TimeVaryingVelocityFieldIntegrationImageFilter ( )
protected
template<class TTimeVaryingVelocityField , class TDisplacementField = Image<typename TTimeVaryingVelocityField::PixelType, GetImageDimension<TTimeVaryingVelocityField>::ImageDimension - 1>>
itk::TimeVaryingVelocityFieldIntegrationImageFilter< TTimeVaryingVelocityField, TDisplacementField >::TimeVaryingVelocityFieldIntegrationImageFilter ( const Self &  )
private

Member Function Documentation

template<class TTimeVaryingVelocityField , class TDisplacementField = Image<typename TTimeVaryingVelocityField::PixelType, GetImageDimension<TTimeVaryingVelocityField>::ImageDimension - 1>>
virtual void itk::TimeVaryingVelocityFieldIntegrationImageFilter< TTimeVaryingVelocityField, TDisplacementField >::BeforeThreadedGenerateData ( void  )
protectedvirtual

If an imaging filter needs to perform processing after the buffer has been allocated but before threads are spawned, the filter can can provide an implementation for BeforeThreadedGenerateData(). The execution flow in the default GenerateData() method will be: 1) Allocate the output buffer 2) Call BeforeThreadedGenerateData() 3) Spawn threads, calling ThreadedGenerateData() in each thread. 4) Call AfterThreadedGenerateData() Note that this flow of control is only available if a filter provides a ThreadedGenerateData() method and NOT a GenerateData() method.

Reimplemented from itk::ImageSource< TDisplacementField >.

template<class TTimeVaryingVelocityField , class TDisplacementField = Image<typename TTimeVaryingVelocityField::PixelType, GetImageDimension<TTimeVaryingVelocityField>::ImageDimension - 1>>
virtual::itk::LightObject::Pointer itk::TimeVaryingVelocityFieldIntegrationImageFilter< TTimeVaryingVelocityField, TDisplacementField >::CreateAnother ( void  ) const
virtual

Create an object from an instance, potentially deferring to a factory. This method allows you to create an instance of an object that is exactly the same type as the referring object. This is useful in cases where an object has been cast back to a base class.

Reimplemented from itk::Object.

template<class TTimeVaryingVelocityField , class TDisplacementField = Image<typename TTimeVaryingVelocityField::PixelType, GetImageDimension<TTimeVaryingVelocityField>::ImageDimension - 1>>
virtual void itk::TimeVaryingVelocityFieldIntegrationImageFilter< TTimeVaryingVelocityField, TDisplacementField >::GenerateOutputInformation ( )
protectedvirtual

Generate the information describing the output data. The default implementation of this method will copy information from the input to the output. A filter may override this method if its output will have different information than its input. For instance, a filter that shrinks an image will need to provide an implementation for this method that changes the spacing of the pixels. Such filters should call their superclass' implementation of this method prior to changing the information values they need (i.e. GenerateOutputInformation() should call Superclass::GenerateOutputInformation() prior to changing the information.

Reimplemented from itk::ProcessObject.

template<class TTimeVaryingVelocityField , class TDisplacementField = Image<typename TTimeVaryingVelocityField::PixelType, GetImageDimension<TTimeVaryingVelocityField>::ImageDimension - 1>>
virtual DisplacementFieldInterpolatorType* itk::TimeVaryingVelocityFieldIntegrationImageFilter< TTimeVaryingVelocityField, TDisplacementField >::GetDisplacementFieldInterpolator ( )
virtual

Get the deformation field interpolator for the initial diffeomorphism (if set). Default = linear.

template<class TTimeVaryingVelocityField , class TDisplacementField = Image<typename TTimeVaryingVelocityField::PixelType, GetImageDimension<TTimeVaryingVelocityField>::ImageDimension - 1>>
virtual DisplacementFieldType* itk::TimeVaryingVelocityFieldIntegrationImageFilter< TTimeVaryingVelocityField, TDisplacementField >::GetInitialDiffeomorphism ( )
virtual

Get the initial diffeomorphism

template<class TTimeVaryingVelocityField , class TDisplacementField = Image<typename TTimeVaryingVelocityField::PixelType, GetImageDimension<TTimeVaryingVelocityField>::ImageDimension - 1>>
virtual RealType itk::TimeVaryingVelocityFieldIntegrationImageFilter< TTimeVaryingVelocityField, TDisplacementField >::GetLowerTimeBound ( ) const
virtual

Get the lower time bound defining the integration domain of the transform. We assume that the total possible time domain is [0,1].

template<class TTimeVaryingVelocityField , class TDisplacementField = Image<typename TTimeVaryingVelocityField::PixelType, GetImageDimension<TTimeVaryingVelocityField>::ImageDimension - 1>>
virtual const char* itk::TimeVaryingVelocityFieldIntegrationImageFilter< TTimeVaryingVelocityField, TDisplacementField >::GetNameOfClass ( ) const
virtual

Run-time type information ( and related methods )

Reimplemented from itk::ImageToImageFilter< TTimeVaryingVelocityField, TDisplacementField >.

template<class TTimeVaryingVelocityField , class TDisplacementField = Image<typename TTimeVaryingVelocityField::PixelType, GetImageDimension<TTimeVaryingVelocityField>::ImageDimension - 1>>
virtual unsigned int itk::TimeVaryingVelocityFieldIntegrationImageFilter< TTimeVaryingVelocityField, TDisplacementField >::GetNumberOfIntegrationSteps ( ) const
virtual

Get the number of integration steps used in the Runge-Kutta solution of the initial value problem. Default = 10.

template<class TTimeVaryingVelocityField , class TDisplacementField = Image<typename TTimeVaryingVelocityField::PixelType, GetImageDimension<TTimeVaryingVelocityField>::ImageDimension - 1>>
virtual RealType itk::TimeVaryingVelocityFieldIntegrationImageFilter< TTimeVaryingVelocityField, TDisplacementField >::GetUpperTimeBound ( ) const
virtual

Get the upper time bound defining the integration domain of the transform. We assume that the total possible time domain is [0,1].

template<class TTimeVaryingVelocityField , class TDisplacementField = Image<typename TTimeVaryingVelocityField::PixelType, GetImageDimension<TTimeVaryingVelocityField>::ImageDimension - 1>>
virtual VelocityFieldInterpolatorType* itk::TimeVaryingVelocityFieldIntegrationImageFilter< TTimeVaryingVelocityField, TDisplacementField >::GetVelocityFieldInterpolator ( )
virtual

Get the time-varying velocity field interpolator. Default = linear.

template<class TTimeVaryingVelocityField , class TDisplacementField = Image<typename TTimeVaryingVelocityField::PixelType, GetImageDimension<TTimeVaryingVelocityField>::ImageDimension - 1>>
VectorType itk::TimeVaryingVelocityFieldIntegrationImageFilter< TTimeVaryingVelocityField, TDisplacementField >::IntegrateVelocityAtPoint ( const PointType &  )
protected
template<class TTimeVaryingVelocityField , class TDisplacementField = Image<typename TTimeVaryingVelocityField::PixelType, GetImageDimension<TTimeVaryingVelocityField>::ImageDimension - 1>>
static Pointer itk::TimeVaryingVelocityFieldIntegrationImageFilter< TTimeVaryingVelocityField, TDisplacementField >::New ( )
static

Method for creation through the object factory.

Reimplemented from itk::Object.

template<class TTimeVaryingVelocityField , class TDisplacementField = Image<typename TTimeVaryingVelocityField::PixelType, GetImageDimension<TTimeVaryingVelocityField>::ImageDimension - 1>>
void itk::TimeVaryingVelocityFieldIntegrationImageFilter< TTimeVaryingVelocityField, TDisplacementField >::operator= ( const Self &  )
private

PushBackInput(), PushFronInput() in the public section force the input to be the type expected by an ImageToImageFilter. However, these methods end of "hiding" the versions from the superclass (ProcessObject) whose arguments are DataObjects. Here, we re-expose the versions from ProcessObject to avoid warnings about hiding methods from the superclass.

Reimplemented from itk::ImageToImageFilter< TTimeVaryingVelocityField, TDisplacementField >.

template<class TTimeVaryingVelocityField , class TDisplacementField = Image<typename TTimeVaryingVelocityField::PixelType, GetImageDimension<TTimeVaryingVelocityField>::ImageDimension - 1>>
void itk::TimeVaryingVelocityFieldIntegrationImageFilter< TTimeVaryingVelocityField, TDisplacementField >::PrintSelf ( std::ostream &  os,
Indent  indent 
) const
protectedvirtual

Methods invoked by Print() to print information about the object including superclasses. Typically not called by the user (use Print() instead) but used in the hierarchical print process to combine the output of several classes.

Reimplemented from itk::ImageToImageFilter< TTimeVaryingVelocityField, TDisplacementField >.

template<class TTimeVaryingVelocityField , class TDisplacementField = Image<typename TTimeVaryingVelocityField::PixelType, GetImageDimension<TTimeVaryingVelocityField>::ImageDimension - 1>>
virtual void itk::TimeVaryingVelocityFieldIntegrationImageFilter< TTimeVaryingVelocityField, TDisplacementField >::SetDisplacementFieldInterpolator ( DisplacementFieldInterpolatorType *  _arg)
virtual

Set the deformation field interpolator for the initial diffeomorphism (if set). Default = linear.

template<class TTimeVaryingVelocityField , class TDisplacementField = Image<typename TTimeVaryingVelocityField::PixelType, GetImageDimension<TTimeVaryingVelocityField>::ImageDimension - 1>>
virtual void itk::TimeVaryingVelocityFieldIntegrationImageFilter< TTimeVaryingVelocityField, TDisplacementField >::SetInitialDiffeomorphism ( DisplacementFieldType *  _arg)
virtual

Set the initial diffeomorphism

template<class TTimeVaryingVelocityField , class TDisplacementField = Image<typename TTimeVaryingVelocityField::PixelType, GetImageDimension<TTimeVaryingVelocityField>::ImageDimension - 1>>
virtual void itk::TimeVaryingVelocityFieldIntegrationImageFilter< TTimeVaryingVelocityField, TDisplacementField >::SetLowerTimeBound ( RealType  _arg)
virtual

Set the lower time bound defining the integration domain of the transform. We assume that the total possible time domain is [0,1].

template<class TTimeVaryingVelocityField , class TDisplacementField = Image<typename TTimeVaryingVelocityField::PixelType, GetImageDimension<TTimeVaryingVelocityField>::ImageDimension - 1>>
virtual void itk::TimeVaryingVelocityFieldIntegrationImageFilter< TTimeVaryingVelocityField, TDisplacementField >::SetNumberOfIntegrationSteps ( unsigned int  _arg)
virtual

Set the number of integration steps used in the Runge-Kutta solution of the initial value problem. Default = 10.

template<class TTimeVaryingVelocityField , class TDisplacementField = Image<typename TTimeVaryingVelocityField::PixelType, GetImageDimension<TTimeVaryingVelocityField>::ImageDimension - 1>>
virtual void itk::TimeVaryingVelocityFieldIntegrationImageFilter< TTimeVaryingVelocityField, TDisplacementField >::SetUpperTimeBound ( RealType  _arg)
virtual

Set the upper time bound defining the integration domain of the transform. We assume that the total possible time domain is [0,1].

template<class TTimeVaryingVelocityField , class TDisplacementField = Image<typename TTimeVaryingVelocityField::PixelType, GetImageDimension<TTimeVaryingVelocityField>::ImageDimension - 1>>
virtual void itk::TimeVaryingVelocityFieldIntegrationImageFilter< TTimeVaryingVelocityField, TDisplacementField >::SetVelocityFieldInterpolator ( VelocityFieldInterpolatorType *  _arg)
virtual

Set the time-varying velocity field interpolator. Default = linear.

template<class TTimeVaryingVelocityField , class TDisplacementField = Image<typename TTimeVaryingVelocityField::PixelType, GetImageDimension<TTimeVaryingVelocityField>::ImageDimension - 1>>
virtual void itk::TimeVaryingVelocityFieldIntegrationImageFilter< TTimeVaryingVelocityField, TDisplacementField >::ThreadedGenerateData ( const OutputRegionType &  ,
ThreadIdType   
)
protectedvirtual

Member Data Documentation

template<class TTimeVaryingVelocityField , class TDisplacementField = Image<typename TTimeVaryingVelocityField::PixelType, GetImageDimension<TTimeVaryingVelocityField>::ImageDimension - 1>>
const unsigned int itk::TimeVaryingVelocityFieldIntegrationImageFilter< TTimeVaryingVelocityField, TDisplacementField >::InputImageDimension = TTimeVaryingVelocityField::ImageDimension
static

Dimensionality of input data is assumed to be one more than the output data the same.

Reimplemented from itk::ImageToImageFilter< TTimeVaryingVelocityField, TDisplacementField >.

Definition at line 75 of file itkTimeVaryingVelocityFieldIntegrationImageFilter.h.

template<class TTimeVaryingVelocityField , class TDisplacementField = Image<typename TTimeVaryingVelocityField::PixelType, GetImageDimension<TTimeVaryingVelocityField>::ImageDimension - 1>>
DisplacementFieldInterpolatorPointer itk::TimeVaryingVelocityFieldIntegrationImageFilter< TTimeVaryingVelocityField, TDisplacementField >::m_DisplacementFieldInterpolator
protected

Definition at line 183 of file itkTimeVaryingVelocityFieldIntegrationImageFilter.h.

template<class TTimeVaryingVelocityField , class TDisplacementField = Image<typename TTimeVaryingVelocityField::PixelType, GetImageDimension<TTimeVaryingVelocityField>::ImageDimension - 1>>
DisplacementFieldPointer itk::TimeVaryingVelocityFieldIntegrationImageFilter< TTimeVaryingVelocityField, TDisplacementField >::m_InitialDiffeomorphism
protected

Definition at line 177 of file itkTimeVaryingVelocityFieldIntegrationImageFilter.h.

template<class TTimeVaryingVelocityField , class TDisplacementField = Image<typename TTimeVaryingVelocityField::PixelType, GetImageDimension<TTimeVaryingVelocityField>::ImageDimension - 1>>
RealType itk::TimeVaryingVelocityFieldIntegrationImageFilter< TTimeVaryingVelocityField, TDisplacementField >::m_LowerTimeBound
protected

Definition at line 174 of file itkTimeVaryingVelocityFieldIntegrationImageFilter.h.

template<class TTimeVaryingVelocityField , class TDisplacementField = Image<typename TTimeVaryingVelocityField::PixelType, GetImageDimension<TTimeVaryingVelocityField>::ImageDimension - 1>>
unsigned int itk::TimeVaryingVelocityFieldIntegrationImageFilter< TTimeVaryingVelocityField, TDisplacementField >::m_NumberOfIntegrationSteps
protected

Definition at line 179 of file itkTimeVaryingVelocityFieldIntegrationImageFilter.h.

template<class TTimeVaryingVelocityField , class TDisplacementField = Image<typename TTimeVaryingVelocityField::PixelType, GetImageDimension<TTimeVaryingVelocityField>::ImageDimension - 1>>
unsigned int itk::TimeVaryingVelocityFieldIntegrationImageFilter< TTimeVaryingVelocityField, TDisplacementField >::m_NumberOfTimePoints
protected

Definition at line 181 of file itkTimeVaryingVelocityFieldIntegrationImageFilter.h.

template<class TTimeVaryingVelocityField , class TDisplacementField = Image<typename TTimeVaryingVelocityField::PixelType, GetImageDimension<TTimeVaryingVelocityField>::ImageDimension - 1>>
RealType itk::TimeVaryingVelocityFieldIntegrationImageFilter< TTimeVaryingVelocityField, TDisplacementField >::m_UpperTimeBound
protected

Definition at line 175 of file itkTimeVaryingVelocityFieldIntegrationImageFilter.h.

template<class TTimeVaryingVelocityField , class TDisplacementField = Image<typename TTimeVaryingVelocityField::PixelType, GetImageDimension<TTimeVaryingVelocityField>::ImageDimension - 1>>
VelocityFieldInterpolatorPointer itk::TimeVaryingVelocityFieldIntegrationImageFilter< TTimeVaryingVelocityField, TDisplacementField >::m_VelocityFieldInterpolator
private

Definition at line 189 of file itkTimeVaryingVelocityFieldIntegrationImageFilter.h.

template<class TTimeVaryingVelocityField , class TDisplacementField = Image<typename TTimeVaryingVelocityField::PixelType, GetImageDimension<TTimeVaryingVelocityField>::ImageDimension - 1>>
const unsigned int itk::TimeVaryingVelocityFieldIntegrationImageFilter< TTimeVaryingVelocityField, TDisplacementField >::OutputImageDimension = TDisplacementField::ImageDimension
static

ImageDimension constants

Reimplemented from itk::ImageToImageFilter< TTimeVaryingVelocityField, TDisplacementField >.

Definition at line 78 of file itkTimeVaryingVelocityFieldIntegrationImageFilter.h.

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