itk::ValuedRegionalMinimaImageFilter< TInputImage, TOutputImage > Class Template Reference

#include <itkValuedRegionalMinimaImageFilter.h>

Inheritance diagram for itk::ValuedRegionalMinimaImageFilter< TInputImage, TOutputImage >:

Collaboration diagram for itk::ValuedRegionalMinimaImageFilter< TInputImage, TOutputImage >:

List of all members.

Public Types
typedef SmartPointer< const Self >	ConstPointer
typedef InputImageType::PixelType	InputImagePixelType
typedef TInputImage	InputImageType
typedef SmartPointer< Self >	Pointer
typedef ValuedRegionalMinimaImageFilter	Self
typedef ValuedRegionalExtremaImageFilter < TInputImage, TOutputImage, std::less< typename TInputImage::PixelType > , std::less< typename TOutputImage::PixelType > >	Superclass
Public Types inherited from itk::ValuedRegionalExtremaImageFilter< TInputImage, TOutputImage, std::less< TInputImage::PixelType >, std::less< TOutputImage::PixelType > >
typedef InputImageType::ConstPointer	InputImageConstPointer
typedef InputImageType::Pointer	InputImagePointer
typedef InputImageType::RegionType	InputImageRegionType
typedef InputImageType::SizeType	ISizeType
typedef OutputImageType::ConstPointer	OutputImageConstPointer
typedef OutputImageType::PixelType	OutputImagePixelType
typedef OutputImageType::Pointer	OutputImagePointer
typedef OutputImageType::RegionType	OutputImageRegionType
typedef TOutputImage	OutputImageType
Public Types inherited from itk::ImageToImageFilter< TInputImage, TOutputImage >
Public Types inherited from itk::ImageSource< TOutputImage >
typedef Superclass::DataObjectIdentifierType	DataObjectIdentifierType
typedef DataObject::Pointer	DataObjectPointer
typedef Superclass::DataObjectPointerArraySizeType	DataObjectPointerArraySizeType
Public Types inherited from itk::ProcessObject
typedef std::vector < DataObjectPointer >	DataObjectPointerArray
typedef std::vector < DataObjectIdentifierType >	NameArray
Public Types inherited from itk::Object
Public Types inherited from itk::LightObject

Public Member Functions
virtual ::itk::LightObject::Pointer	CreateAnother (void) const
virtual const char *	GetNameOfClass () const
	typedef (Concept::LessThanComparable< InputImagePixelType >) InputPixelTypeComparable
	typedef (Concept::HasPixelTraits< InputImagePixelType >) InputHasPixelTraitsCheck
	typedef (Concept::HasNumericTraits< InputImagePixelType >) InputHasNumericTraitsCheck
Public Member Functions inherited from itk::ValuedRegionalExtremaImageFilter< TInputImage, TOutputImage, std::less< TInputImage::PixelType >, std::less< TOutputImage::PixelType > >
virtual bool	GetFlat () const
virtual void	SetFullyConnected (bool _arg)
virtual const bool &	GetFullyConnected ()
virtual void	FullyConnectedOn ()
virtual void	FullyConnectedOff ()
virtual void	SetMarkerValue (typename TInputImage::PixelType _arg)
virtual const TInputImage::PixelType &	GetMarkerValue ()
Public Member Functions inherited from itk::ImageToImageFilter< TInputImage, TOutputImage >
const InputImageType *	GetInput (void) const
const InputImageType *	GetInput (unsigned int idx) const
virtual void	PopBackInput ()
virtual void	PopFrontInput ()
virtual void	PushBackInput (const InputImageType *image)
virtual void	PushFrontInput (const InputImageType *image)
virtual void	SetInput (const InputImageType *image)
virtual void	SetInput (unsigned int, const TInputImage *image)
Public Member Functions inherited from itk::ImageSource< TOutputImage >
OutputImageType *	GetOutput (unsigned int idx)
virtual void	GraftNthOutput (unsigned int idx, DataObject *output)
virtual void	GraftOutput (DataObject *output)
virtual void	GraftOutput (const DataObjectIdentifierType &key, DataObject *output)
OutputImageType *	GetOutput (void)
const OutputImageType *	GetOutput (void) const
virtual ProcessObject::DataObjectPointer	MakeOutput (ProcessObject::DataObjectPointerArraySizeType idx)
Public Member Functions inherited from itk::ProcessObject
virtual void	AbortGenerateDataOff ()
virtual void	AbortGenerateDataOn ()
virtual const bool &	GetAbortGenerateData ()
NameArray	GetInputNames () const
MultiThreader *	GetMultiThreader () const
DataObjectPointerArraySizeType	GetNumberOfIndexedInputs () const
DataObjectPointerArraySizeType	GetNumberOfInputs () const
DataObjectPointerArraySizeType	GetNumberOfOutputs () const
virtual DataObjectPointerArraySizeType	GetNumberOfValidRequiredInputs () const
NameArray	GetOutputNames () const
virtual const float &	GetProgress ()
NameArray	GetRequiredInputNames () const
bool	HasInput (const DataObjectIdentifierType &key) const
bool	HasOutput (const DataObjectIdentifierType &key) const
virtual DataObjectPointer	MakeOutput (const DataObjectIdentifierType &)
virtual void	PrepareOutputs ()
virtual void	PropagateRequestedRegion (DataObject *output)
virtual void	ResetPipeline ()
virtual void	SetAbortGenerateData (bool _arg)
virtual void	SetProgress (float _arg)
virtual void	Update ()
virtual void	UpdateLargestPossibleRegion ()
virtual void	UpdateOutputData (DataObject *output)
virtual void	UpdateOutputInformation ()
void	UpdateProgress (float amount)
DataObjectPointerArray	GetInputs ()
DataObjectPointerArray	GetOutputs ()
DataObjectPointerArray	GetIndexedInputs ()
DataObjectPointerArray	GetIndexedOutputs ()
DataObjectPointerArraySizeType	GetNumberOfIndexedOutputs () const
virtual void	SetReleaseDataFlag (bool flag)
virtual bool	GetReleaseDataFlag () const
void	ReleaseDataFlagOn ()
void	ReleaseDataFlagOff ()
virtual void	SetReleaseDataBeforeUpdateFlag (bool _arg)
virtual const bool &	GetReleaseDataBeforeUpdateFlag ()
virtual void	ReleaseDataBeforeUpdateFlagOn ()
virtual void	ReleaseDataBeforeUpdateFlagOff ()
virtual void	SetNumberOfThreads (ThreadIdType _arg)
virtual const ThreadIdType &	GetNumberOfThreads ()
Public Member Functions inherited from itk::Object
unsigned long	AddObserver (const EventObject &event, Command *)
unsigned long	AddObserver (const EventObject &event, Command *) const
virtual void	DebugOff () const
virtual void	DebugOn () const
Command *	GetCommand (unsigned long tag)
bool	GetDebug () const
MetaDataDictionary &	GetMetaDataDictionary (void)
const MetaDataDictionary &	GetMetaDataDictionary (void) const
virtual unsigned long	GetMTime () const
virtual const TimeStamp &	GetTimeStamp () const
bool	HasObserver (const EventObject &event) const
void	InvokeEvent (const EventObject &)
void	InvokeEvent (const EventObject &) const
virtual void	Modified () const
virtual void	Register () const
void	RemoveAllObservers ()
void	RemoveObserver (unsigned long tag)
void	SetDebug (bool debugFlag) const
void	SetMetaDataDictionary (const MetaDataDictionary &rhs)
virtual void	SetReferenceCount (int)
virtual void	UnRegister () const
Public Member Functions inherited from itk::LightObject
virtual void	Delete ()
virtual int	GetReferenceCount () const
	itkCloneMacro (Self)
void	Print (std::ostream &os, Indent indent=0) const

Static Public Member Functions
static Pointer	New ()

Protected Member Functions
	ValuedRegionalMinimaImageFilter ()
virtual	~ValuedRegionalMinimaImageFilter ()
Protected Member Functions inherited from itk::ValuedRegionalExtremaImageFilter< TInputImage, TOutputImage, std::less< TInputImage::PixelType >, std::less< TOutputImage::PixelType > >
void	EnlargeOutputRequestedRegion (DataObject *)
void	GenerateData ()
void	GenerateInputRequestedRegion ()
	ValuedRegionalExtremaImageFilter ()
	~ValuedRegionalExtremaImageFilter ()
void	PrintSelf (std::ostream &os, Indent indent) const
Protected Member Functions inherited from itk::ImageToImageFilter< TInputImage, TOutputImage >
virtual void	CallCopyInputRegionToOutputRegion (OutputImageRegionType &destRegion, const InputImageRegionType &srcRegion)
virtual void	CallCopyOutputRegionToInputRegion (InputImageRegionType &destRegion, const OutputImageRegionType &srcRegion)
	ImageToImageFilter ()
virtual void	VerifyInputInformation ()
	~ImageToImageFilter ()
void	PushBackInput (const DataObject *input)
void	PushFrontInput (const DataObject *input)
Protected Member Functions inherited from itk::ImageSource< TOutputImage >
virtual void	AfterThreadedGenerateData ()
virtual void	AllocateOutputs ()
virtual void	BeforeThreadedGenerateData ()
	ImageSource ()
virtual unsigned int	SplitRequestedRegion (unsigned int i, unsigned int num, OutputImageRegionType &splitRegion)
virtual void	ThreadedGenerateData (const OutputImageRegionType &outputRegionForThread, ThreadIdType threadId)
virtual	~ImageSource ()
Protected Member Functions inherited from itk::ProcessObject
virtual void	AddInput (DataObject *input)
virtual void	AddOutput (DataObject *output)
bool	AddRequiredInputName (const DataObjectIdentifierType &)
virtual void	CacheInputReleaseDataFlags ()
virtual void	GenerateOutputInformation ()
virtual void	GenerateOutputRequestedRegion (DataObject *output)
virtual const DataObjectPointerArraySizeType &	GetNumberOfRequiredInputs ()
virtual const DataObjectPointerArraySizeType &	GetNumberOfRequiredOutputs ()
bool	IsIndexedName (const DataObjectIdentifierType &) const
bool	IsRequiredInputName (const DataObjectIdentifierType &) const
	itkLegacyMacro (virtual void RemoveInput(DataObject *input))
	itkLegacyMacro (virtual void RemoveOutput(DataObject *output))
	itkLegacyMacro (void SetNumberOfInputs(DataObjectPointerArraySizeType num))
	itkLegacyMacro (void SetNumberOfOutputs(DataObjectPointerArraySizeType num))
DataObjectPointerArraySizeType	MakeIndexFromName (const DataObjectIdentifierType &) const
DataObjectIdentifierType	MakeNameFromIndex (DataObjectPointerArraySizeType) const
	ProcessObject ()
virtual void	PropagateResetPipeline ()
virtual void	ReleaseInputs ()
virtual void	RemoveInput (const DataObjectIdentifierType &key)
virtual void	RemoveInput (DataObjectPointerArraySizeType)
virtual void	RemoveOutput (const DataObjectIdentifierType &key)
virtual void	RemoveOutput (DataObjectPointerArraySizeType idx)
bool	RemoveRequiredInputName (const DataObjectIdentifierType &)
virtual void	RestoreInputReleaseDataFlags ()
virtual void	SetInput (const DataObjectIdentifierType &key, DataObject *input)
virtual void	SetNthInput (DataObjectPointerArraySizeType num, DataObject *input)
virtual void	SetNthOutput (DataObjectPointerArraySizeType num, DataObject *output)
void	SetNumberOfIndexedInputs (DataObjectPointerArraySizeType num)
void	SetNumberOfIndexedOutputs (DataObjectPointerArraySizeType num)
virtual void	SetNumberOfRequiredInputs (DataObjectPointerArraySizeType)
virtual void	SetNumberOfRequiredOutputs (DataObjectPointerArraySizeType _arg)
virtual void	SetOutput (const DataObjectIdentifierType &key, DataObject *output)
virtual void	SetPrimaryInput (DataObject *input)
virtual void	SetPrimaryOutput (DataObject *output)
void	SetRequiredInputNames (const NameArray &)
virtual void	VerifyPreconditions ()
	~ProcessObject ()
DataObject *	GetInput (const DataObjectIdentifierType &key)
const DataObject *	GetInput (const DataObjectIdentifierType &key) const
DataObject *	GetInput (DataObjectPointerArraySizeType)
const DataObject *	GetInput (DataObjectPointerArraySizeType idx) const
DataObject *	GetPrimaryInput ()
const DataObject *	GetPrimaryInput () const
DataObject *	GetOutput (const DataObjectIdentifierType &key)
const DataObject *	GetOutput (const DataObjectIdentifierType &key) const
DataObject *	GetOutput (DataObjectPointerArraySizeType idx)
const DataObject *	GetOutput (DataObjectPointerArraySizeType idx) const
DataObject *	GetPrimaryOutput ()
const DataObject *	GetPrimaryOutput () const
Protected Member Functions inherited from itk::Object
	Object ()
bool	PrintObservers (std::ostream &os, Indent indent) const
virtual void	SetTimeStamp (const TimeStamp &time)
virtual	~Object ()
Protected Member Functions inherited from itk::LightObject
virtual LightObject::Pointer	InternalClone () const
	LightObject ()
virtual void	PrintHeader (std::ostream &os, Indent indent) const
virtual void	PrintTrailer (std::ostream &os, Indent indent) const
virtual	~LightObject ()

Private Member Functions
void	operator= (const Self &)
	ValuedRegionalMinimaImageFilter (const Self &)

Additional Inherited Members
Static Public Attributes inherited from itk::ValuedRegionalExtremaImageFilter< TInputImage, TOutputImage, std::less< TInputImage::PixelType >, std::less< TOutputImage::PixelType > >
static const unsigned int	InputImageDimension
static const unsigned int	OutputImageDimension
Static Public Attributes inherited from itk::ImageToImageFilter< TInputImage, TOutputImage >
Static Public Attributes inherited from itk::ImageSource< TOutputImage >

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Detailed Description

template<class TInputImage, class TOutputImage>
class itk::ValuedRegionalMinimaImageFilter< TInputImage, TOutputImage >

Transforms the image so that any pixel that is not a regional minima is set to the maximum value for the pixel type. Pixels that are regional minima retain their value.

Regional minima are flat zones surrounded by pixels of higher value. A completely flat image will be marked as a regional minima by this filter.

This code was contributed in the Insight Journal paper: "Finding regional extrema - methods and performance" by Beare R., Lehmann G. http://hdl.handle.net/1926/153 http://www.insight-journal.org/browse/publication/65

Author:

Richard Beare. Department of Medicine, Monash University, Melbourne, Australia.

See also:

ValuedRegionalMaximaImageFilter, ValuedRegionalExtremaImageFilter,

HMinimaImageFilter

Wiki Examples:

• All Examples

• ValuedRegionalMinimaImageFilter

Definition at line 55 of file itkValuedRegionalMinimaImageFilter.h.

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Member Typedef Documentation

template<class TInputImage , class TOutputImage >

typedef SmartPointer< const Self > itk::ValuedRegionalMinimaImageFilter< TInputImage, TOutputImage >::ConstPointer

Reimplemented from itk::ValuedRegionalExtremaImageFilter< TInputImage, TOutputImage, std::less< TInputImage::PixelType >, std::less< TOutputImage::PixelType > >.

Definition at line 70 of file itkValuedRegionalMinimaImageFilter.h.

template<class TInputImage , class TOutputImage >

typedef InputImageType::PixelType itk::ValuedRegionalMinimaImageFilter< TInputImage, TOutputImage >::InputImagePixelType

Reimplemented from itk::ValuedRegionalExtremaImageFilter< TInputImage, TOutputImage, std::less< TInputImage::PixelType >, std::less< TOutputImage::PixelType > >.

Definition at line 73 of file itkValuedRegionalMinimaImageFilter.h.

template<class TInputImage , class TOutputImage >

typedef TInputImage itk::ValuedRegionalMinimaImageFilter< TInputImage, TOutputImage >::InputImageType

Some convenient typedefs.

Reimplemented from itk::ValuedRegionalExtremaImageFilter< TInputImage, TOutputImage, std::less< TInputImage::PixelType >, std::less< TOutputImage::PixelType > >.

Definition at line 72 of file itkValuedRegionalMinimaImageFilter.h.

template<class TInputImage , class TOutputImage >

typedef SmartPointer< Self > itk::ValuedRegionalMinimaImageFilter< TInputImage, TOutputImage >::Pointer

Reimplemented from itk::ValuedRegionalExtremaImageFilter< TInputImage, TOutputImage, std::less< TInputImage::PixelType >, std::less< TOutputImage::PixelType > >.

Definition at line 69 of file itkValuedRegionalMinimaImageFilter.h.

template<class TInputImage , class TOutputImage >

typedef ValuedRegionalMinimaImageFilter itk::ValuedRegionalMinimaImageFilter< TInputImage, TOutputImage >::Self

Standard class typedefs.

Reimplemented from itk::ValuedRegionalExtremaImageFilter< TInputImage, TOutputImage, std::less< TInputImage::PixelType >, std::less< TOutputImage::PixelType > >.

Definition at line 63 of file itkValuedRegionalMinimaImageFilter.h.

template<class TInputImage , class TOutputImage >

typedef ValuedRegionalExtremaImageFilter< TInputImage, TOutputImage, std::less< typename TInputImage::PixelType >, std::less< typename TOutputImage::PixelType > > itk::ValuedRegionalMinimaImageFilter< TInputImage, TOutputImage >::Superclass

Reimplemented from itk::ValuedRegionalExtremaImageFilter< TInputImage, TOutputImage, std::less< TInputImage::PixelType >, std::less< TOutputImage::PixelType > >.

Definition at line 67 of file itkValuedRegionalMinimaImageFilter.h.

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Constructor & Destructor Documentation

template<class TInputImage , class TOutputImage >

itk::ValuedRegionalMinimaImageFilter< TInputImage, TOutputImage >::ValuedRegionalMinimaImageFilter ( )

inlineprotected

End concept checking

Definition at line 94 of file itkValuedRegionalMinimaImageFilter.h.

template<class TInputImage , class TOutputImage >

virtual itk::ValuedRegionalMinimaImageFilter< TInputImage, TOutputImage >::~ValuedRegionalMinimaImageFilter ( )

inlineprotectedvirtual

Definition at line 99 of file itkValuedRegionalMinimaImageFilter.h.

template<class TInputImage , class TOutputImage >

itk::ValuedRegionalMinimaImageFilter< TInputImage, TOutputImage >::ValuedRegionalMinimaImageFilter ( const Self &  )

private

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Member Function Documentation

template<class TInputImage , class TOutputImage >

virtual::itk::LightObject::Pointer itk::ValuedRegionalMinimaImageFilter< TInputImage, TOutputImage >::CreateAnother ( void  ) const

virtual

Create an object from an instance, potentially deferring to a factory. This method allows you to create an instance of an object that is exactly the same type as the referring object. This is useful in cases where an object has been cast back to a base class.

Reimplemented from itk::ValuedRegionalExtremaImageFilter< TInputImage, TOutputImage, std::less< TInputImage::PixelType >, std::less< TOutputImage::PixelType > >.

template<class TInputImage , class TOutputImage >

virtual const char* itk::ValuedRegionalMinimaImageFilter< TInputImage, TOutputImage >::GetNameOfClass ( ) const

virtual

Runtime information support.

Reimplemented from itk::ValuedRegionalExtremaImageFilter< TInputImage, TOutputImage, std::less< TInputImage::PixelType >, std::less< TOutputImage::PixelType > >.

template<class TInputImage , class TOutputImage >

static Pointer itk::ValuedRegionalMinimaImageFilter< TInputImage, TOutputImage >::New ( )

static

Method for creation through the object factory.

Reimplemented from itk::ValuedRegionalExtremaImageFilter< TInputImage, TOutputImage, std::less< TInputImage::PixelType >, std::less< TOutputImage::PixelType > >.

template<class TInputImage , class TOutputImage >

void itk::ValuedRegionalMinimaImageFilter< TInputImage, TOutputImage >::operator= ( const Self &  )

private

PushBackInput(), PushFronInput() in the public section force the input to be the type expected by an ImageToImageFilter. However, these methods end of "hiding" the versions from the superclass (ProcessObject) whose arguments are DataObjects. Here, we re-expose the versions from ProcessObject to avoid warnings about hiding methods from the superclass.

Reimplemented from itk::ValuedRegionalExtremaImageFilter< TInputImage, TOutputImage, std::less< TInputImage::PixelType >, std::less< TOutputImage::PixelType > >.

template<class TInputImage , class TOutputImage >

itk::ValuedRegionalMinimaImageFilter< TInputImage, TOutputImage >::typedef

(

Concept::LessThanComparable< InputImagePixelType >

)

Begin concept checking This class requires InputPixelTypeComparable in the form of ( Concept::LessThanComparable< InputImagePixelType > )

template<class TInputImage , class TOutputImage >

itk::ValuedRegionalMinimaImageFilter< TInputImage, TOutputImage >::typedef

(

Concept::HasPixelTraits< InputImagePixelType >

)

This class requires InputHasPixelTraitsCheck in the form of ( Concept::HasPixelTraits< InputImagePixelType > )

Reimplemented from itk::ValuedRegionalExtremaImageFilter< TInputImage, TOutputImage, std::less< TInputImage::PixelType >, std::less< TOutputImage::PixelType > >.

template<class TInputImage , class TOutputImage >

itk::ValuedRegionalMinimaImageFilter< TInputImage, TOutputImage >::typedef

(

Concept::HasNumericTraits< InputImagePixelType >

)

This class requires InputHasNumericTraitsCheck in the form of ( Concept::HasNumericTraits< InputImagePixelType > )

Reimplemented from itk::ValuedRegionalExtremaImageFilter< TInputImage, TOutputImage, std::less< TInputImage::PixelType >, std::less< TOutputImage::PixelType > >.

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The documentation for this class was generated from the following file:

• itkValuedRegionalMinimaImageFilter.h