ITK
4.2.0
Insight Segmentation and Registration Toolkit
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#include <itkMRCHeaderObject.h>
Public Attributes | |
float | alpha |
float | beta |
float | gamma |
int16_t | idtype |
int16_t | lens |
int32_t | mode |
int32_t | mx |
int32_t | my |
int32_t | mz |
int16_t | nd1 |
int16_t | nd2 |
int16_t | nint |
int8_t | notused2 [28] |
int16_t | nreal |
int32_t | nxstart |
int32_t | nystart |
int32_t | nzstart |
float | rms |
float | tiltangles [6] |
int16_t | vd1 |
int16_t | vd2 |
float | xlen |
float | xorg |
float | ylen |
float | yorg |
float | zlen |
float | zorg |
plain old data structure of the MRC header as used by IMOD. This header must be 1024 bytes.
The structure of the MRC header taken from: http://bio3d.colorado.edu/imod/doc/mrc_format.txt with permision from David Mastronarde on 8/21/2009
Definition at line 66 of file itkMRCHeaderObject.h.
float itk::MRCHeaderObject::Header::alpha |
cell angles (ignored)
Definition at line 101 of file itkMRCHeaderObject.h.
float itk::MRCHeaderObject::Header::beta |
Definition at line 102 of file itkMRCHeaderObject.h.
float itk::MRCHeaderObject::Header::gamma |
map column 1=x,2=y,3=z. (ignored) map row 1=x,2=y,3=z. (ignored) map section 1=x,2=y,3=z. (ignored)
Definition at line 105 of file itkMRCHeaderObject.h.
int16_t itk::MRCHeaderObject::Header::idtype |
Definition at line 158 of file itkMRCHeaderObject.h.
int16_t itk::MRCHeaderObject::Header::lens |
Definition at line 160 of file itkMRCHeaderObject.h.
int32_t itk::MRCHeaderObject::Header::mode |
< Number of Columns < Number of Rows < Number of Sections Types of pixel in image. Values used by IMOD: 0 = unsigned bytes, 1 = signed short integers (16 bits), 2 = float, 3 = short * 2, (used for complex data) 4 = float * 2, (used for complex data) 6 = unsigned 16-bit integers (non-standard) 16 = unsigned char * 3 (for rgb data, non-standard)
Definition at line 83 of file itkMRCHeaderObject.h.
int32_t itk::MRCHeaderObject::Header::mx |
Grid size in X, Y, and Z
Definition at line 91 of file itkMRCHeaderObject.h.
int32_t itk::MRCHeaderObject::Header::my |
Definition at line 92 of file itkMRCHeaderObject.h.
int32_t itk::MRCHeaderObject::Header::mz |
Definition at line 93 of file itkMRCHeaderObject.h.
int16_t itk::MRCHeaderObject::Header::nd1 |
Definition at line 161 of file itkMRCHeaderObject.h.
int16_t itk::MRCHeaderObject::Header::nd2 |
Definition at line 162 of file itkMRCHeaderObject.h.
int16_t itk::MRCHeaderObject::Header::nint |
< Minimum pixel value. < Maximum pixel value. < Mean pixel value. < image type < space group number < number of bytes in extended header < Creator ID < extra data (not used)
Definition at line 138 of file itkMRCHeaderObject.h.
int8_t itk::MRCHeaderObject::Header::notused2[28] |
extra data (not used)
Definition at line 155 of file itkMRCHeaderObject.h.
int16_t itk::MRCHeaderObject::Header::nreal |
Definition at line 140 of file itkMRCHeaderObject.h.
int32_t itk::MRCHeaderObject::Header::nxstart |
Starting point of sub image. (ignored)
Definition at line 86 of file itkMRCHeaderObject.h.
int32_t itk::MRCHeaderObject::Header::nystart |
Definition at line 87 of file itkMRCHeaderObject.h.
int32_t itk::MRCHeaderObject::Header::nzstart |
Definition at line 88 of file itkMRCHeaderObject.h.
float itk::MRCHeaderObject::Header::rms |
Definition at line 178 of file itkMRCHeaderObject.h.
float itk::MRCHeaderObject::Header::tiltangles[6] |
Definition at line 167 of file itkMRCHeaderObject.h.
int16_t itk::MRCHeaderObject::Header::vd1 |
Definition at line 163 of file itkMRCHeaderObject.h.
int16_t itk::MRCHeaderObject::Header::vd2 |
Definition at line 164 of file itkMRCHeaderObject.h.
float itk::MRCHeaderObject::Header::xlen |
Cell size; pixel spacing = xlen/mx
Definition at line 96 of file itkMRCHeaderObject.h.
float itk::MRCHeaderObject::Header::xorg |
Definition at line 170 of file itkMRCHeaderObject.h.
float itk::MRCHeaderObject::Header::ylen |
Definition at line 97 of file itkMRCHeaderObject.h.
float itk::MRCHeaderObject::Header::yorg |
Definition at line 171 of file itkMRCHeaderObject.h.
float itk::MRCHeaderObject::Header::zlen |
Definition at line 98 of file itkMRCHeaderObject.h.
float itk::MRCHeaderObject::Header::zorg |
Contains "MAP " First byte has 17 for big- or 68 for little-endian
Definition at line 174 of file itkMRCHeaderObject.h.