#include <itkGaussianSmoothingOnUpdateTimeVaryingVelocityFieldTransform.h>

Inheritance diagram for itk::GaussianSmoothingOnUpdateTimeVaryingVelocityFieldTransform< TScalar, NDimensions >:

Collaboration diagram for itk::GaussianSmoothingOnUpdateTimeVaryingVelocityFieldTransform< TScalar, NDimensions >:

Detailed Description

template<class TScalar, unsigned int NDimensions>
class itk::GaussianSmoothingOnUpdateTimeVaryingVelocityFieldTransform< TScalar, NDimensions >

Modifies the UpdateTransformParameters method to peform a Gaussian smoothing of the velocity field after adding the update array.

This class is the same as TimeVaryingVelocityFieldTransform, except for the changes to UpdateTransformParameters. The method smooths the result of the addition of the update array and the displacement field, using a GaussianOperator filter.

Definition at line 40 of file itkGaussianSmoothingOnUpdateTimeVaryingVelocityFieldTransform.h.

Public Types
typedef SmartPointer< const Self >	ConstPointer

typedef Superclass::DerivativeType	DerivativeType

typedef DerivativeType::ValueType	DerivativeValueType

typedef VelocityFieldType::PixelType	DisplacementVectorType

typedef DisplacementVectorType::ValueType	DisplacementVectorValueType

typedef SmartPointer< Self >	Pointer

typedef Superclass::ScalarType	ScalarType

typedef GaussianSmoothingOnUpdateTimeVaryingVelocityFieldTransform	Self

typedef TimeVaryingVelocityFieldTransform < TScalar, NDimensions >	Superclass

typedef Superclass::TimeVaryingVelocityFieldPointer	TimeVaryingVelocityFieldPointer

typedef Superclass::TimeVaryingVelocityFieldType	TimeVaryingVelocityFieldType

typedef Superclass::VelocityFieldType	VelocityFieldType

Public Types inherited from itk::TimeVaryingVelocityFieldTransform< TScalar, NDimensions >
typedef SmartPointer< const Self >	ConstPointer

typedef Superclass::DerivativeType	DerivativeType

typedef Superclass::DisplacementFieldType	DisplacementFieldType

typedef Superclass::InterpolatorType	InterpolatorType

typedef Superclass::InverseTransformBasePointer	InverseTransformBasePointer

typedef Superclass::NumberOfParametersType	NumberOfParametersType

typedef Superclass::ParametersType	ParametersType

typedef ParametersType::ValueType	ParametersValueType

typedef SmartPointer< Self >	Pointer

typedef Superclass::ScalarType	ScalarType

typedef TimeVaryingVelocityFieldTransform	Self

typedef VelocityFieldTransform < TScalar, NDimensions >	Superclass

typedef VelocityFieldType::Pointer	TimeVaryingVelocityFieldPointer

typedef VelocityFieldType	TimeVaryingVelocityFieldType

typedef Transform< TScalar, NDimensions, NDimensions > ::Pointer	TransformPointer

typedef Superclass::VelocityFieldInterpolatorType	VelocityFieldIntegratorType

typedef Superclass::VelocityFieldType	VelocityFieldType

Public Types inherited from itk::VelocityFieldTransform< TScalar, NDimensions >
typedef SmartPointer< const Self >	ConstPointer

typedef Superclass::DerivativeType	DerivativeType

typedef VelocityFieldType::DirectionType	DirectionType

typedef DisplacementFieldType::Pointer	DisplacementFieldPointer

typedef Superclass::DisplacementFieldType	DisplacementFieldType

typedef VelocityFieldType::IndexType	IndexType

typedef Superclass::InputPointType	InputPointType

typedef Superclass::InputVectorPixelType	InputVectorPixelType

typedef Superclass::InputVectorType	InputVectorType

typedef Superclass::InverseTransformBasePointer	InverseTransformBasePointer

typedef Superclass::NumberOfParametersType	NumberOfParametersType

typedef ImageVectorOptimizerParametersHelper < ScalarType, Dimension, VelocityFieldDimension >	OptimizerParametersHelperType

typedef Superclass::OutputPointType	OutputPointType

typedef Superclass::OutputVectorPixelType	OutputVectorPixelType

typedef Superclass::OutputVectorType	OutputVectorType

typedef Superclass::ParametersType	ParametersType

typedef Superclass::ParametersValueType	ParametersValueType

typedef VelocityFieldType::PixelType	PixelType

typedef SmartPointer< Self >	Pointer

typedef VelocityFieldType::PointType	PointType

typedef VelocityFieldType::RegionType	RegionType

typedef Superclass::ScalarType	ScalarType

typedef VelocityFieldTransform	Self

typedef VelocityFieldType::SizeType	SizeType

typedef VelocityFieldType::SpacingType	SpacingType

typedef DisplacementFieldTransform < TScalar, NDimensions >	Superclass

typedef Superclass::TransformCategoryType	TransformCategoryType

typedef VelocityFieldInterpolatorType::Pointer	VelocityFieldInterpolatorPointer

typedef VectorInterpolateImageFunction < VelocityFieldType, ScalarType >	VelocityFieldInterpolatorType

typedef VelocityFieldType::Pointer	VelocityFieldPointer

typedef Image < OutputVectorType, VelocityFieldDimension >	VelocityFieldType

Public Types inherited from itk::DisplacementFieldTransform< TScalar, NDimensions >
typedef SmartPointer< const Self >	ConstPointer

typedef Superclass::DerivativeType	DerivativeType

typedef DisplacementFieldType::DirectionType	DirectionType

typedef DisplacementFieldType::Pointer	DisplacementFieldPointer

typedef Image < OutputVectorType, Dimension >	DisplacementFieldType

typedef DisplacementFieldType::IndexType	IndexType

typedef Superclass::InputCovariantVectorType	InputCovariantVectorType

typedef Superclass::InputDiffusionTensor3DType	InputDiffusionTensor3DType

typedef Superclass::InputPointType	InputPointType

typedef CovariantVector < ScalarType, InputDiffusionTensor3DType::Dimension >	InputTensorEigenVectorType

typedef Superclass::InputVectorPixelType	InputVectorPixelType

typedef Superclass::InputVectorType	InputVectorType

typedef Superclass::InputVnlVectorType	InputVnlVectorType

typedef VectorInterpolateImageFunction < DisplacementFieldType, ScalarType >	InterpolatorType

typedef Superclass::InverseTransformBasePointer	InverseTransformBasePointer

typedef Superclass::JacobianType	JacobianType

typedef Superclass::NumberOfParametersType	NumberOfParametersType

typedef ImageVectorOptimizerParametersHelper < ScalarType, OutputVectorType::Dimension, Dimension >	OptimizerParametersHelperType

typedef Superclass::OutputCovariantVectorType	OutputCovariantVectorType

typedef Superclass::OutputDiffusionTensor3DType	OutputDiffusionTensor3DType

typedef Superclass::OutputPointType	OutputPointType

typedef CovariantVector < ScalarType, OutputDiffusionTensor3DType::Dimension >	OutputTensorEigenVectorType

typedef Superclass::OutputVectorPixelType	OutputVectorPixelType

typedef Superclass::OutputVectorType	OutputVectorType

typedef Superclass::OutputVnlVectorType	OutputVnlVectorType

typedef Superclass::ParametersType	ParametersType

typedef Superclass::ParametersValueType	ParametersValueType

typedef DisplacementFieldType::PixelType	PixelType

typedef SmartPointer< Self >	Pointer

typedef DisplacementFieldType::PointType	PointType

typedef DisplacementFieldType::RegionType	RegionType

typedef Superclass::ScalarType	ScalarType

typedef DisplacementFieldTransform	Self

typedef DisplacementFieldType::SizeType	SizeType

typedef DisplacementFieldType::SpacingType	SpacingType

typedef Transform< TScalar, NDimensions, NDimensions >	Superclass

typedef Superclass::TransformCategoryType	TransformCategoryType

Public Types inherited from itk::Transform< TScalar, NDimensions, NDimensions >
typedef SmartPointer< const Self >	ConstPointer

typedef Array < ParametersValueType >	DerivativeType

typedef Matrix< double, itkGetStaticConstMacro(OutputSpaceDimension), itkGetStaticConstMacro(InputSpaceDimension)>	DirectionChangeMatrix

typedef CovariantVector < TScalar, NInputDimensions >	InputCovariantVectorType

typedef DiffusionTensor3D < TScalar >	InputDiffusionTensor3DType

typedef Matrix< double, itkGetStaticConstMacro(InputSpaceDimension), itkGetStaticConstMacro(InputSpaceDimension)>	InputDirectionMatrix

typedef Point< TScalar, NInputDimensions >	InputPointType

typedef SymmetricSecondRankTensor < TScalar, NInputDimensions >	InputSymmetricSecondRankTensorType

typedef VariableLengthVector < TScalar >	InputVectorPixelType

typedef Vector< TScalar, NInputDimensions >	InputVectorType

typedef vnl_vector_fixed < TScalar, NInputDimensions >	InputVnlVectorType

typedef InverseTransformBaseType::Pointer	InverseTransformBasePointer

typedef Transform< TScalar, NOutputDimensions, NInputDimensions >	InverseTransformBaseType

typedef Array2D < ParametersValueType >	JacobianType

typedef Matrix< TScalar, itkGetStaticConstMacro(OutputSpaceDimension), itkGetStaticConstMacro(InputSpaceDimension)>	MatrixType

typedef Superclass::NumberOfParametersType	NumberOfParametersType

typedef CovariantVector < TScalar, NOutputDimensions >	OutputCovariantVectorType

typedef DiffusionTensor3D < TScalar >	OutputDiffusionTensor3DType

typedef Matrix< double, itkGetStaticConstMacro(OutputSpaceDimension), itkGetStaticConstMacro(OutputSpaceDimension)>	OutputDirectionMatrix

typedef Point< TScalar, NOutputDimensions >	OutputPointType

typedef SymmetricSecondRankTensor < TScalar, NOutputDimensions >	OutputSymmetricSecondRankTensorType

typedef VariableLengthVector < TScalar >	OutputVectorPixelType

typedef Vector< TScalar, NOutputDimensions >	OutputVectorType

typedef vnl_vector_fixed < TScalar, NOutputDimensions >	OutputVnlVectorType

typedef Superclass::ParametersType	ParametersType

typedef Superclass::ParametersValueType	ParametersValueType

typedef SmartPointer< Self >	Pointer

typedef TScalar	ScalarType

typedef Transform	Self

typedef TransformBase	Superclass

Public Types inherited from itk::TransformBase
typedef SmartPointer< const Self >	ConstPointer

typedef IdentifierType	NumberOfParametersType

typedef OptimizerParameters < ParametersValueType >	ParametersType

typedef double	ParametersValueType

typedef SmartPointer< Self >	Pointer

typedef TransformBase	Self

typedef Object	Superclass

enum	TransformCategoryType { UnknownTransformCategory =0, Linear =1, BSpline =2, Spline =3, DisplacementField =4, VelocityField =5 }

Public Types inherited from itk::Object
typedef SmartPointer< const Self >	ConstPointer

typedef SmartPointer< Self >	Pointer

typedef Object	Self

typedef LightObject	Superclass

Public Types inherited from itk::LightObject
typedef SmartPointer< const Self >	ConstPointer

typedef SmartPointer< Self >	Pointer

typedef LightObject	Self

Public Member Functions
virtual TimeVaryingVelocityFieldPointer	GaussianSmoothTimeVaryingVelocityField (VelocityFieldType *, ScalarType, ScalarType)

virtual const char *	GetNameOfClass () const

virtual void	UpdateTransformParameters (const DerivativeType &update, ScalarType factor=1.0)


virtual void	SetGaussianSpatialSmoothingVarianceForTheUpdateField (ScalarType _arg)

virtual const ScalarType &	GetGaussianSpatialSmoothingVarianceForTheUpdateField ()


virtual void	SetGaussianTemporalSmoothingVarianceForTheUpdateField (ScalarType _arg)

virtual const ScalarType &	GetGaussianTemporalSmoothingVarianceForTheUpdateField ()


virtual void	SetGaussianSpatialSmoothingVarianceForTheTotalField (ScalarType _arg)

virtual const ScalarType &	GetGaussianSpatialSmoothingVarianceForTheTotalField ()


virtual void	SetGaussianTemporalSmoothingVarianceForTheTotalField (ScalarType _arg)

virtual const ScalarType &	GetGaussianTemporalSmoothingVarianceForTheTotalField ()

Public Member Functions inherited from itk::TimeVaryingVelocityFieldTransform< TScalar, NDimensions >
virtual ::itk::LightObject::Pointer	CreateAnother (void) const

VelocityFieldType::Pointer	GetTimeVaryingVelocityField ()

virtual void	IntegrateVelocityField ()

virtual void	SetTimeVaryingVelocityField (VelocityFieldType *field)

Public Member Functions inherited from itk::VelocityFieldTransform< TScalar, NDimensions >
virtual ::itk::LightObject::Pointer	CreateAnother (void) const

bool	GetInverse (Self *inverse) const

virtual InverseTransformBasePointer	GetInverseTransform () const

virtual ScalarType	GetLowerTimeBound () const

virtual unsigned int	GetNumberOfIntegrationSteps () const

virtual ScalarType	GetUpperTimeBound () const

virtual VelocityFieldType *	GetVelocityField ()

virtual const unsigned long &	GetVelocityFieldSetTime ()

virtual void	SetDisplacementField (DisplacementFieldType *_arg)

virtual void	SetFixedParameters (const ParametersType &)

virtual void	SetLowerTimeBound (ScalarType _arg)

virtual void	SetNumberOfIntegrationSteps (unsigned int _arg)

virtual void	SetUpperTimeBound (ScalarType _arg)

virtual void	SetVelocityField (VelocityFieldType *)

virtual VelocityFieldInterpolatorType *	GetVelocityFieldInterpolator ()

virtual void	SetVelocityFieldInterpolator (VelocityFieldInterpolatorType *)

Public Member Functions inherited from itk::DisplacementFieldTransform< TScalar, NDimensions >
virtual void	ComputeInverseJacobianWithRespectToPosition (const InputPointType &x, JacobianType &j) const

virtual void	ComputeJacobianWithRespectToParameters (const IndexType &, JacobianType &j) const

virtual void	ComputeJacobianWithRespectToPosition (const InputPointType &x, JacobianType &j) const

virtual void	ComputeJacobianWithRespectToPosition (const IndexType &x, JacobianType &j) const

virtual DisplacementFieldType *	GetDisplacementField ()

virtual const ModifiedTimeType &	GetDisplacementFieldSetTime ()

bool	GetInverse (Self *inverse) const

virtual void	GetInverseJacobianOfForwardFieldWithRespectToPosition (const InputPointType &point, JacobianType &jacobian, bool useSVD=false) const

virtual void	GetInverseJacobianOfForwardFieldWithRespectToPosition (const IndexType &index, JacobianType &jacobian, bool useSVD=false) const

virtual NumberOfParametersType	GetNumberOfLocalParameters (void) const

virtual TransformCategoryType	GetTransformCategory () const

virtual OutputVectorPixelType	TransformCovariantVector (const InputVectorPixelType &) const

OutputVectorPixelType	TransformDiffusionTensor (const InputVectorPixelType &) const

virtual OutputPointType	TransformPoint (const InputPointType &thisPoint) const

virtual OutputVectorPixelType	TransformVector (const InputVectorPixelType &) const

virtual OutputVnlVectorType	TransformVector (const InputVnlVectorType &) const

virtual void	UpdateTransformParameters (const DerivativeType &update, ScalarType factor=1.0)

virtual DisplacementFieldType *	GetInverseDisplacementField ()

virtual void	SetInverseDisplacementField (DisplacementFieldType *inverseDisplacementField)

virtual InterpolatorType *	GetInterpolator ()

virtual void	SetInterpolator (InterpolatorType *interpolator)

virtual InterpolatorType *	GetInverseInterpolator ()

virtual void	SetInverseInterpolator (InterpolatorType *interpolator)

virtual OutputVectorType	TransformVector (const InputVectorType &) const

OutputDiffusionTensor3DType	TransformDiffusionTensor (const InputDiffusionTensor3DType &) const

virtual OutputCovariantVectorType	TransformCovariantVector (const InputCovariantVectorType &) const

virtual void	SetParameters (const ParametersType &params)

virtual void	ComputeJacobianWithRespectToParameters (const InputPointType &, JacobianType &j) const

Public Member Functions inherited from itk::Transform< TScalar, NDimensions, NDimensions >
virtual void	ComputeInverseJacobianWithRespectToPosition (const InputPointType &x, JacobianType &jacobian) const

virtual void	ComputeJacobianWithRespectToPosition (const InputPointType &, JacobianType &) const

virtual const ParametersType &	GetFixedParameters (void) const

unsigned int	GetInputSpaceDimension (void) const

bool	GetInverse (Self *) const

virtual NumberOfParametersType	GetNumberOfParameters (void) const

unsigned int	GetOutputSpaceDimension (void) const

virtual const ParametersType &	GetParameters (void) const

virtual std::string	GetTransformTypeAsString () const

virtual bool	IsLinear () const

	itkCloneMacro (Self)

virtual void	SetParametersByValue (const ParametersType &p)

virtual OutputCovariantVectorType	TransformCovariantVector (const InputCovariantVectorType &) const

virtual OutputCovariantVectorType	TransformCovariantVector (const InputCovariantVectorType &vector, const InputPointType &point) const

virtual OutputVectorPixelType	TransformCovariantVector (const InputVectorPixelType &) const

virtual OutputVectorPixelType	TransformCovariantVector (const InputVectorPixelType &vector, const InputPointType &point) const

virtual OutputDiffusionTensor3DType	TransformDiffusionTensor3D (const InputDiffusionTensor3DType &) const

virtual OutputDiffusionTensor3DType	TransformDiffusionTensor3D (const InputDiffusionTensor3DType &tensor, const InputPointType &point) const

virtual OutputVectorPixelType	TransformDiffusionTensor3D (const InputVectorPixelType &) const

virtual OutputVectorPixelType	TransformDiffusionTensor3D (const InputVectorPixelType &tensor, const InputPointType &point) const

virtual OutputPointType	TransformPoint (const InputPointType &) const =0

virtual OutputSymmetricSecondRankTensorType	TransformSymmetricSecondRankTensor (const InputSymmetricSecondRankTensorType &tensor, const InputPointType &point) const

virtual OutputSymmetricSecondRankTensorType	TransformSymmetricSecondRankTensor (const InputSymmetricSecondRankTensorType &) const

virtual OutputVectorPixelType	TransformSymmetricSecondRankTensor (const InputVectorPixelType &) const

virtual OutputVectorPixelType	TransformSymmetricSecondRankTensor (const InputVectorPixelType &tensor, const InputPointType &point) const

virtual OutputVectorType	TransformVector (const InputVectorType &) const

virtual OutputVectorType	TransformVector (const InputVectorType &vector, const InputPointType &point) const

virtual OutputVnlVectorType	TransformVector (const InputVnlVectorType &) const

virtual OutputVnlVectorType	TransformVector (const InputVnlVectorType &vector, const InputPointType &point) const

virtual OutputVectorPixelType	TransformVector (const InputVectorPixelType &) const

virtual OutputVectorPixelType	TransformVector (const InputVectorPixelType &vector, const InputPointType &point) const

virtual void	UpdateTransformParameters (const DerivativeType &update, TScalarfactor=1.0)

virtual void	ComputeJacobianWithRespectToParameters (const InputPointType &, JacobianType &) const

Static Public Member Functions
static Pointer	New ()

Static Public Member Functions inherited from itk::TimeVaryingVelocityFieldTransform< TScalar, NDimensions >
static Pointer	New ()

Static Public Member Functions inherited from itk::VelocityFieldTransform< TScalar, NDimensions >
static Pointer	New ()

Static Public Member Functions inherited from itk::DisplacementFieldTransform< TScalar, NDimensions >
static Pointer	New ()

Static Public Attributes
static const unsigned int	TimeVaryingVelocityFieldDimension = NDimensions+1

Protected Member Functions
	GaussianSmoothingOnUpdateTimeVaryingVelocityFieldTransform ()

void	PrintSelf (std::ostream &os, Indent indent) const

virtual	~GaussianSmoothingOnUpdateTimeVaryingVelocityFieldTransform ()

Protected Member Functions inherited from itk::TimeVaryingVelocityFieldTransform< TScalar, NDimensions >
	TimeVaryingVelocityFieldTransform ()

virtual	~TimeVaryingVelocityFieldTransform ()

Protected Member Functions inherited from itk::VelocityFieldTransform< TScalar, NDimensions >
DisplacementFieldType::Pointer	CopyDisplacementField (const DisplacementFieldType *) const

virtual LightObject::Pointer	InternalClone () const

void	PrintSelf (std::ostream &os, Indent indent) const

	VelocityFieldTransform ()

virtual	~VelocityFieldTransform ()

Protected Member Functions inherited from itk::DisplacementFieldTransform< TScalar, NDimensions >
	DisplacementFieldTransform ()

virtual	~DisplacementFieldTransform ()

Protected Member Functions inherited from itk::Transform< TScalar, NDimensions, NDimensions >
OutputDiffusionTensor3DType	PreservationOfPrincipalDirectionDiffusionTensor3DReorientation (const InputDiffusionTensor3DType, const JacobianType) const

	Transform ()

	Transform (NumberOfParametersType NumberOfParameters)

virtual	~Transform ()

Protected Member Functions inherited from itk::TransformBase
	TransformBase ()

virtual	~TransformBase ()

Protected Member Functions inherited from itk::Object
	Object ()

bool	PrintObservers (std::ostream &os, Indent indent) const

virtual void	SetTimeStamp (const TimeStamp &time)

virtual	~Object ()

Protected Member Functions inherited from itk::LightObject
	LightObject ()

virtual void	PrintHeader (std::ostream &os, Indent indent) const

virtual void	PrintTrailer (std::ostream &os, Indent indent) const

virtual	~LightObject ()

Protected Attributes
ModifiedTimeType	m_GaussianSmoothingTempFieldModifiedTime

ScalarType	m_GaussianSpatialSmoothingVarianceForTheTotalField

ScalarType	m_GaussianSpatialSmoothingVarianceForTheUpdateField

ScalarType	m_GaussianTemporalSmoothingVarianceForTheTotalField

ScalarType	m_GaussianTemporalSmoothingVarianceForTheUpdateField

Private Member Functions
	GaussianSmoothingOnUpdateTimeVaryingVelocityFieldTransform (const Self &)

void	operator= (const Self &)

Additional Inherited Members
Protected Types inherited from itk::LightObject
typedef int	InternalReferenceCountType