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Modules
Segmentation
BioCell
include
itkBioGene.h
Go to the documentation of this file.
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/*=========================================================================
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*
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* Copyright Insight Software Consortium
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*
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* Licensed under the Apache License, Version 2.0 (the "License");
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* you may not use this file except in compliance with the License.
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* You may obtain a copy of the License at
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*
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* http://www.apache.org/licenses/LICENSE-2.0.txt
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*
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* Unless required by applicable law or agreed to in writing, software
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* distributed under the License is distributed on an "AS IS" BASIS,
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* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
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* See the License for the specific language governing permissions and
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* limitations under the License.
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*
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*=========================================================================*/
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#ifndef __itkBioGene_h
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#define __itkBioGene_h
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#include <string>
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#include <vector>
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#include <map>
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#include "
itkMacro.h
"
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namespace
itk
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{
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namespace
bio
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{
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class
ITK_EXPORT
Gene
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{
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public
:
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typedef
std::string
NameType
;
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typedef
std::string
DomainType
;
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typedef
double
AffinityType
;
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typedef
std::map< DomainType, AffinityType >
ProteinDomainsType
;
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typedef
struct
{
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DomainType
m_Domain
;
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bool
m_Type
;
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}
ControlDomainType
;
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typedef
std::vector< ControlDomainType >
GeneControlDomainsType
;
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public
:
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Gene
();
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virtual
~
Gene
();
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void
Copy(
const
Gene
& genome);
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void
SetName(
const
NameType
& name);
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void
SetName(
const
char
*name);
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const
char
* GetName()
const
;
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void
AddProteinDomain(
const
DomainType
& domain,
AffinityType
affinity);
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void
AddGeneControlDomain(
const
DomainType
& domain,
bool
type);
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private
:
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NameType
m_Name
;
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GeneControlDomainsType
m_ControlDomains
;
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ProteinDomainsType
m_ProteinDomains
;
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};
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}
// end namespace bio
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}
// end namespace itk
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#endif
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