itk::BYUMeshIO Class Reference

#include <itkBYUMeshIO.h>

Inheritance diagram for itk::BYUMeshIO:

Collaboration diagram for itk::BYUMeshIO:

Detailed Description

This class defines how to read and write BYU Geometry File Format.

Definition at line 36 of file itkBYUMeshIO.h.

Public Types
typedef SmartPointer< const Self >	ConstPointer
typedef SmartPointer< Self >	Pointer
typedef BYUMeshIO	Self
typedef Superclass::SizeValueType	SizeValueType
typedef Superclass::StreamOffsetType	StreamOffsetType
typedef MeshIOBase	Superclass
Public Types inherited from itk::MeshIOBase
typedef std::vector< std::string >	ArrayOfExtensionsType
enum	ByteOrder {   BigEndian,   LittleEndian,   OrderNotApplicable }
enum	CellGeometryType {   VERTEX_CELL = 0,   LINE_CELL,   TRIANGLE_CELL,   QUADRILATERAL_CELL,   POLYGON_CELL,   TETRAHEDRON_CELL,   HEXAHEDRON_CELL,   QUADRATIC_EDGE_CELL,   QUADRATIC_TRIANGLE_CELL,   LAST_ITK_CELL,   MAX_ITK_CELLS = 255 }
typedef SmartPointer< const Self >	ConstPointer
enum	FileType {   ASCII,   BINARY,   TYPENOTAPPLICABLE }
enum	IOComponentType {   UNKNOWNCOMPONENTTYPE,   UCHAR,   CHAR,   USHORT,   SHORT,   UINT,   INT,   ULONG,   LONG,   LONGLONG,   ULONGLONG,   FLOAT,   DOUBLE,   LDOUBLE }
enum	IOPixelType {   UNKNOWNPIXELTYPE,   SCALAR,   RGB,   RGBA,   OFFSET,   VECTOR,   POINT,   COVARIANTVECTOR,   SYMMETRICSECONDRANKTENSOR,   DIFFUSIONTENSOR3D,   COMPLEX,   FIXEDARRAY,   ARRAY,   MATRIX,   VARIABLELENGTHVECTOR,   VARIABLESIZEMATRIX }
typedef SmartPointer< Self >	Pointer
typedef MeshIOBase	Self
typedef IdentifierType	SizeValueType
typedef std::streamoff	StreamOffsetType
typedef LightProcessObject	Superclass
Public Types inherited from itk::LightProcessObject
typedef SmartPointer< const Self >	ConstPointer
typedef SmartPointer< Self >	Pointer
typedef LightProcessObject	Self
typedef Object	Superclass
Public Types inherited from itk::Object
typedef SmartPointer< const Self >	ConstPointer
typedef SmartPointer< Self >	Pointer
typedef Object	Self
typedef LightObject	Superclass
Public Types inherited from itk::LightObject
typedef SmartPointer< const Self >	ConstPointer
typedef SmartPointer< Self >	Pointer
typedef LightObject	Self

Public Member Functions
virtual bool	CanReadFile (const char *FileNameToRead)
virtual bool	CanWriteFile (const char *FileNameToWrite)
virtual ::itk::LightObject::Pointer	CreateAnother (void) const
virtual const char *	GetNameOfClass () const
virtual void	ReadCellData (void *buffer)
virtual void	ReadCells (void *buffer)
virtual void	ReadMeshInformation ()
virtual void	ReadPointData (void *buffer)
virtual void	ReadPoints (void *buffer)
virtual void	Write ()
virtual void	WriteCellData (void *buffer)
virtual void	WriteCells (void *buffer)
virtual void	WriteMeshInformation ()
virtual void	WritePointData (void *buffer)
virtual void	WritePoints (void *buffer)
Public Member Functions inherited from itk::MeshIOBase
std::string	GetByteOrderAsString (ByteOrder) const
unsigned int	GetComponentSize (IOComponentType componentType) const
std::string	GetComponentTypeAsString (IOComponentType) const
std::string	GetFileTypeAsString (FileType) const
std::string	GetPixelTypeAsString (IOPixelType) const
const ArrayOfExtensionsType &	GetSupportedReadExtensions () const
const ArrayOfExtensionsType &	GetSupportedWriteExtensions () const
void	SetByteOrderToBigEndian ()
void	SetByteOrderToLittleEndian ()
void	SetFileTypeToASCII ()
void	SetFileTypeToBinary ()
template<typename T >
void	SetPixelType (const T &, bool UsePointPixel=true)
template<typename T >
void	SetPixelType (const RGBPixel< T > &, bool UsePointPixel=true)
template<typename T >
void	SetPixelType (const RGBAPixel< T > &, bool UsePointPixel=true)
template<typename T , unsigned int VLength>
void	SetPixelType (const Vector< T, VLength > &, bool UsePointPixel=true)
template<typename T , unsigned int VLength>
void	SetPixelType (const CovariantVector< T, VLength > &, bool UsePointPixel=true)
template<typename T , unsigned int VLength>
void	SetPixelType (const FixedArray< T, VLength > &, bool UsePointPixel=true)
template<typename T , unsigned int VLength>
void	SetPixelType (const SymmetricSecondRankTensor< T, VLength >, bool UsePointPixel=true)
template<typename T >
void	SetPixelType (const DiffusionTensor3D< T > &, bool UsePointPixel=true)
template<typename T , unsigned int NR, unsigned int NC>
void	SetPixelType (const Matrix< T, NR, NC > &, bool UsePointPixel=true)
template<typename T >
void	SetPixelType (const std::complex< T > &, bool UsePointPixel=true)
template<typename T >
void	SetPixelType (const Array< T > &array, bool UsePointPixel=true)
template<typename T >
void	SetPixelType (const VariableLengthVector< T > &vector, bool UsePointPixel=true)
template<typename T >
void	SetPixelType (const VariableSizeMatrix< T > &matrix, bool UsePointPixel=true)
virtual void	SetFileName (const char *_arg)
virtual const char *	GetFileName () const
virtual void	SetPointPixelType (const IOPixelType _arg)
virtual IOPixelType	GetPointPixelType () const
virtual void	SetCellPixelType (const IOPixelType _arg)
virtual IOPixelType	GetCellPixelType () const
virtual void	SetPointComponentType (const IOComponentType _arg)
virtual IOComponentType	GetPointComponentType () const
virtual void	SetCellComponentType (const IOComponentType _arg)
virtual IOComponentType	GetCellComponentType () const
virtual void	SetPointPixelComponentType (const IOComponentType _arg)
virtual IOComponentType	GetPointPixelComponentType () const
virtual void	SetCellPixelComponentType (const IOComponentType _arg)
virtual IOComponentType	GetCellPixelComponentType () const
virtual void	SetNumberOfPointPixelComponents (unsigned int _arg)
virtual unsigned int	GetNumberOfPointPixelComponents () const
virtual void	SetNumberOfCellPixelComponents (unsigned int _arg)
virtual unsigned int	GetNumberOfCellPixelComponents () const
virtual void	SetPointDimension (unsigned int _arg)
virtual unsigned int	GetPointDimension () const
virtual void	SetNumberOfPoints (SizeValueType _arg)
virtual SizeValueType	GetNumberOfPoints () const
virtual void	SetNumberOfCells (SizeValueType _arg)
virtual SizeValueType	GetNumberOfCells () const
virtual void	SetNumberOfPointPixels (SizeValueType _arg)
virtual SizeValueType	GetNumberOfPointPixels () const
virtual void	SetNumberOfCellPixels (SizeValueType _arg)
virtual SizeValueType	GetNumberOfCellPixels () const
virtual void	SetCellBufferSize (SizeValueType _arg)
virtual SizeValueType	GetCellBufferSize () const
virtual void	SetUpdatePoints (bool _arg)
virtual bool	GetUpdatePoints () const
virtual void	SetUpdateCells (bool _arg)
virtual bool	GetUpdateCells () const
virtual void	SetUpdatePointData (bool _arg)
virtual bool	GetUpdatePointData () const
virtual void	SetUpdateCellData (bool _arg)
virtual bool	GetUpdateCellData () const
virtual void	SetFileType (const FileType _arg)
virtual FileType	GetFileType () const
virtual void	SetByteOrder (const ByteOrder _arg)
virtual ByteOrder	GetByteOrder () const
virtual void	SetUseCompression (bool _arg)
virtual bool	GetUseCompression () const
virtual void	UseCompressionOn ()
virtual void	UseCompressionOff ()
Public Member Functions inherited from itk::LightProcessObject
virtual void	AbortGenerateDataOff ()
virtual void	AbortGenerateDataOn ()
virtual const bool &	GetAbortGenerateData ()
virtual void	SetAbortGenerateData (bool _arg)
virtual void	UpdateOutputData ()
void	UpdateProgress (float amount)
virtual void	SetProgress (float _arg)
virtual const float &	GetProgress ()
Public Member Functions inherited from itk::Object
unsigned long	AddObserver (const EventObject &event, Command *)
unsigned long	AddObserver (const EventObject &event, Command *) const
virtual void	DebugOff () const
virtual void	DebugOn () const
Command *	GetCommand (unsigned long tag)
bool	GetDebug () const
MetaDataDictionary &	GetMetaDataDictionary (void)
const MetaDataDictionary &	GetMetaDataDictionary (void) const
virtual ModifiedTimeType	GetMTime () const
virtual const TimeStamp &	GetTimeStamp () const
bool	HasObserver (const EventObject &event) const
void	InvokeEvent (const EventObject &)
void	InvokeEvent (const EventObject &) const
virtual void	Modified () const
virtual void	Register () const
void	RemoveAllObservers ()
void	RemoveObserver (unsigned long tag)
void	SetDebug (bool debugFlag) const
void	SetMetaDataDictionary (const MetaDataDictionary &rhs)
virtual void	SetReferenceCount (int)
virtual void	UnRegister () const
Public Member Functions inherited from itk::LightObject
virtual void	Delete ()
virtual int	GetReferenceCount () const
	itkCloneMacro (Self)
void	Print (std::ostream &os, Indent indent=0) const

Static Public Member Functions
static Pointer	New ()
StreamOffsetType	m_FilePosition
SizeValueType	m_PartId
SizeValueType	m_FirstCellId
SizeValueType	m_LastCellId
template<typename T >
void	WritePoints (T *buffer, std::ofstream &outputFile)
template<typename T >
void	WriteCells (T *buffer, std::ofstream &outputFile)
	BYUMeshIO ()
virtual	~BYUMeshIO ()
void	PrintSelf (std::ostream &os, Indent indent) const
	BYUMeshIO (const Self &)
void	operator= (const Self &)

Additional Inherited Members
Protected Types inherited from itk::LightObject
typedef int	InternalReferenceCountType
Protected Member Functions inherited from itk::MeshIOBase
void	AddSupportedReadExtension (const char *extension)
void	AddSupportedWriteExtension (const char *extension)
	MeshIOBase ()
void	PrintSelf (std::ostream &os, Indent indent) const
template<class T >
void	ReadBufferAsBinary (T *buffer, std::ifstream &inputFile, SizeValueType numberOfComponents)
virtual	~MeshIOBase ()
template<class T >
void	ReadBufferAsAscii (T *buffer, std::ifstream &inputFile, SizeValueType numberOfComponents)
template<class T >
void	WriteBufferAsAscii (T *buffer, std::ofstream &outputFile, SizeValueType numberOfLines, SizeValueType numberOfComponents)
template<class TOutput , class TInput >
void	WriteBufferAsBinary (TInput *buffer, std::ofstream &outputFile, SizeValueType numberOfComponents)
template<class TInput , class TOutput >
void	ReadCellsBuffer (TInput *input, TOutput *output)
template<class TInput , class TOutput >
void	ReadCellsBuffer (TInput *input, TOutput *output, MeshIOBase::CellGeometryType type)
template<class TInput , class TOutput >
void	WriteCellsBuffer (TInput *input, TOutput *output, CellGeometryType cellType, unsigned int numberOfPoints, SizeValueType numberOfCells)
template<class TInput , class TOutput >
void	WriteCellsBuffer (TInput *input, TOutput *output, CellGeometryType cellType, SizeValueType numberOfCells)
Protected Attributes inherited from itk::MeshIOBase
ByteOrder	m_ByteOrder
SizeValueType	m_CellBufferSize
IOComponentType	m_CellComponentType
IOComponentType	m_CellPixelComponentType
IOPixelType	m_CellPixelType
std::string	m_FileName
FileType	m_FileType
unsigned int	m_NumberOfCellPixelComponents
SizeValueType	m_NumberOfCellPixels
SizeValueType	m_NumberOfCells
unsigned int	m_NumberOfPointPixelComponents
SizeValueType	m_NumberOfPointPixels
SizeValueType	m_NumberOfPoints
IOComponentType	m_PointComponentType
unsigned int	m_PointDimension
IOComponentType	m_PointPixelComponentType
IOPixelType	m_PointPixelType
bool	m_UpdateCellData
bool	m_UpdateCells
bool	m_UpdatePointData
bool	m_UpdatePoints
bool	m_UseCompression

Member Typedef Documentation

typedef SmartPointer< const Self > itk::BYUMeshIO::ConstPointer

Definition at line 42 of file itkBYUMeshIO.h.

typedef SmartPointer< Self > itk::BYUMeshIO::Pointer

Definition at line 43 of file itkBYUMeshIO.h.

typedef BYUMeshIO itk::BYUMeshIO::Self

Standard class typedefs.

Definition at line 40 of file itkBYUMeshIO.h.

typedef Superclass::SizeValueType itk::BYUMeshIO::SizeValueType

Definition at line 46 of file itkBYUMeshIO.h.

typedef Superclass::StreamOffsetType itk::BYUMeshIO::StreamOffsetType

Definition at line 45 of file itkBYUMeshIO.h.

typedef MeshIOBase itk::BYUMeshIO::Superclass

Definition at line 41 of file itkBYUMeshIO.h.

Constructor & Destructor Documentation

itk::BYUMeshIO::BYUMeshIO ( )

protected

Write points to output stream

virtual itk::BYUMeshIO::~BYUMeshIO ( )

inlineprotectedvirtual

Write points to output stream

Definition at line 140 of file itkBYUMeshIO.h.

itk::BYUMeshIO::BYUMeshIO ( const Self &  )

private

Write points to output stream

Member Function Documentation

virtual bool itk::BYUMeshIO::CanReadFile ( const char *  FileNameToRead )

virtual

Determine if the file can be read with this MeshIO implementation.

Parameters

FileNameToRead

The name of the file to test for reading.

Postcondition

Sets classes MeshIOBase::m_FileName variable to be FileNameToWrite

Returns

Returns true if this MeshIO can read the file specified.

Implements itk::MeshIOBase.

virtual bool itk::BYUMeshIO::CanWriteFile ( const char *  FileNameToWrite )

virtual

Determine if the file can be written with this MeshIO implementation.

Parameters

FileNameToWrite

The name of the file to test for writing.

Postcondition

Sets classes MeshIOBase::m_FileName variable to be FileNameToWrite

Returns

Returns true if this MeshIO can write the file specified.

Implements itk::MeshIOBase.

virtual::itk::LightObject::Pointer itk::BYUMeshIO::CreateAnother ( void  ) const

virtual

Create an object from an instance, potentially deferring to a factory. This method allows you to create an instance of an object that is exactly the same type as the referring object. This is useful in cases where an object has been cast back to a base class.

Reimplemented from itk::LightProcessObject.

virtual const char* itk::BYUMeshIO::GetNameOfClass ( ) const

virtual

Run-time type information (and related methods).

Reimplemented from itk::MeshIOBase.

static Pointer itk::BYUMeshIO::New ( )

static

Method for creation through the object factory.

void itk::BYUMeshIO::operator= ( const Self &  )

private

Write points to output stream

void itk::BYUMeshIO::PrintSelf ( std::ostream &  os, Indent  indent  ) const

protectedvirtual

Write points to output stream

Reimplemented from itk::LightProcessObject.

virtual void itk::BYUMeshIO::ReadCellData ( void *  buffer )

virtual

Implements itk::MeshIOBase.

virtual void itk::BYUMeshIO::ReadCells ( void *  buffer )

virtual

Implements itk::MeshIOBase.

virtual void itk::BYUMeshIO::ReadMeshInformation ( )

virtual

Set the spacing and dimension information for the set filename.

Implements itk::MeshIOBase.

virtual void itk::BYUMeshIO::ReadPointData ( void *  buffer )

virtual

Implements itk::MeshIOBase.

virtual void itk::BYUMeshIO::ReadPoints ( void *  buffer )

virtual

Reads the data from disk into the memory buffer provided.

Implements itk::MeshIOBase.

virtual void itk::BYUMeshIO::Write ( )

virtual

Implements itk::MeshIOBase.

virtual void itk::BYUMeshIO::WriteCellData ( void *  buffer )

virtual

Implements itk::MeshIOBase.

virtual void itk::BYUMeshIO::WriteCells ( void *  buffer )

virtual

Implements itk::MeshIOBase.

template<typename T >

void itk::BYUMeshIO::WriteCells ( T *  buffer, std::ofstream &  outputFile  )

inlineprotected

Write points to output stream

Definition at line 120 of file itkBYUMeshIO.h.

virtual void itk::BYUMeshIO::WriteMeshInformation ( )

virtual

Set the spacing and dimension information for the set filename.

Implements itk::MeshIOBase.

virtual void itk::BYUMeshIO::WritePointData ( void *  buffer )

virtual

Implements itk::MeshIOBase.

virtual void itk::BYUMeshIO::WritePoints ( void *  buffer )

virtual

Writes the data to disk from the memory buffer provided.

Implements itk::MeshIOBase.

template<typename T >

void itk::BYUMeshIO::WritePoints ( T *  buffer, std::ofstream &  outputFile  )

inlineprotected

Write points to output stream

Definition at line 101 of file itkBYUMeshIO.h.

Member Data Documentation

StreamOffsetType itk::BYUMeshIO::m_FilePosition

private

Write points to output stream

Definition at line 148 of file itkBYUMeshIO.h.

SizeValueType itk::BYUMeshIO::m_FirstCellId

private

Write points to output stream

Definition at line 150 of file itkBYUMeshIO.h.

SizeValueType itk::BYUMeshIO::m_LastCellId

private

Write points to output stream

Definition at line 151 of file itkBYUMeshIO.h.

SizeValueType itk::BYUMeshIO::m_PartId

private

Write points to output stream

Definition at line 149 of file itkBYUMeshIO.h.

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The documentation for this class was generated from the following file:

• itkBYUMeshIO.h