ITK  4.4.0
Insight Segmentation and Registration Toolkit
Public Types | Public Member Functions | Static Public Member Functions | Static Public Attributes | Protected Member Functions | Protected Attributes | Private Member Functions | List of all members
itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform > Class Template Reference

#include <itkImageRegistrationMethodv4.h>

+ Inheritance diagram for itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >:
+ Collaboration diagram for itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >:

Detailed Description

template<typename TFixedImage, typename TMovingImage, typename TOutputTransform>
class itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >

Interface method for the current registration framework.

This interface method class encapsulates typical registration usage by incorporating all the necessary elements for performing a simple image registration between two images. This method also allows for multistage registration whereby each stage is characterize by possibly different transforms of and different image metrics. For example, many users will want to perform a linear registration followed by deformable registration where both stages are performed in multiple levels. Each level can be characterized by:

Multiple stages are handled by linking multiple instantiations of this class where the output transform is added to the optional composite transform input.

Transform adaptors: To accommodate new changes to the current ITK registration framework, we introduced the concept of transform adaptors. Whereas each stage is associated with a moving and, possibly, fixed transform, each level of each stage is defined by a transform adaptor which describes how to adapt the transform to the current level. For example, if one were to use the B-spline transform during a deformable registration stage, common practice is to increase the resolution of the B-spline mesh (or, analogously, the control point grid size) at each level. At each level, one would define the parameters of the B-spline transform adaptor at that level which increases the resolution from the previous level. For many transforms, such as affine, this concept of an adaptor may be nonsensical. For this reason, the base transform adaptor class does not do anything to the transform but merely passes it through. Each level of each stage must define a transform adaptor but, by default, the base adaptor class is assigned which, again, does not do anything to the transform. A special mention should be made of the transform adaptor at level 0 of any stage. Most likely, the user will not want to do anything to the transform as it enters into the given stage so typical use will be to assign the base adaptor class to level 0 of all stages but we leave that open to the user.

Output: The output is the updated transform.

Author
Nick Tustison
Brian Avants

Definition at line 89 of file itkImageRegistrationMethodv4.h.

Public Types

typedef
CompositeTransformType::Pointer 
CompositeTransformPointer
 
typedef CompositeTransform
< RealType, ImageDimension
CompositeTransformType
 
typedef SmartPointer< const SelfConstPointer
 
typedef
ProcessObject::DataObjectPointerArraySizeType 
DataObjectPointerArraySizeType
 
typedef
DecoratedOutputTransformType::Pointer 
DecoratedOutputTransformPointer
 
typedef DataObjectDecorator
< OutputTransformType
DecoratedOutputTransformType
 
typedef
OutputTransformType::DerivativeType 
DerivativeType
 
typedef DerivativeType::ValueType DerivativeValueType
 
typedef FixedImageType::Pointer FixedImagePointer
 
typedef std::vector
< FixedImagePointer
FixedImagesContainerType
 
typedef TFixedImage FixedImageType
 
typedef ImageToImageMetricv4
< FixedImageType,
MovingImageType
ImageMetricType
 
typedef
InitialTransformType::Pointer 
InitialTransformPointer
 
typedef Transform< RealType,
ImageDimension, ImageDimension
InitialTransformType
 
typedef MetricType::Pointer MetricPointer
 
typedef
ImageMetricType::FixedSampledPointSetType 
MetricSamplePointSetType
 
typedef Array< RealTypeMetricSamplingPercentageArrayType
 
enum  MetricSamplingStrategyType {
  NONE,
  REGULAR,
  RANDOM
}
 
typedef ObjectToObjectMetricBase MetricType
 
typedef MovingImageType::Pointer MovingImagePointer
 
typedef std::vector
< MovingImagePointer
MovingImagesContainerType
 
typedef TMovingImage MovingImageType
 
typedef
ObjectToObjectMultiMetricv4
< ImageDimension,
ImageDimension
MultiMetricType
 
typedef OptimizerType::Pointer OptimizerPointer
 
typedef ObjectToObjectOptimizerBase OptimizerType
 
typedef
OutputTransformType::Pointer 
OutputTransformPointer
 
typedef TOutputTransform OutputTransformType
 
typedef SmartPointer< SelfPointer
 
typedef
OutputTransformType::ScalarType 
RealType
 
typedef ImageRegistrationMethodv4 Self
 
typedef Array< SizeValueTypeShrinkFactorsArrayType
 
typedef
ShrinkFilterType::ShrinkFactorsType 
ShrinkFactorsPerDimensionContainerType
 
typedef ShrinkImageFilter
< FixedImageType,
VirtualImageType
ShrinkFilterType
 
typedef Array< RealTypeSmoothingSigmasArrayType
 
typedef ProcessObject Superclass
 
typedef
TransformParametersAdaptorType::Pointer 
TransformParametersAdaptorPointer
 
typedef std::vector
< TransformParametersAdaptorPointer
TransformParametersAdaptorsContainerType
 
typedef
TransformParametersAdaptor
< OutputTransformType
TransformParametersAdaptorType
 
typedef
ImageMetricType::VirtualImageType 
VirtualImageType
 
- Public Types inherited from itk::ProcessObject
typedef SmartPointer< const SelfConstPointer
 
typedef
DataObject::DataObjectIdentifierType 
DataObjectIdentifierType
 
typedef DataObject::Pointer DataObjectPointer
 
typedef std::vector
< DataObjectPointer
DataObjectPointerArray
 
typedef
DataObjectPointerArray::size_type 
DataObjectPointerArraySizeType
 
typedef std::vector
< DataObjectIdentifierType
NameArray
 
typedef SmartPointer< SelfPointer
 
typedef ProcessObject Self
 
typedef Object Superclass
 
- Public Types inherited from itk::Object
typedef SmartPointer< const SelfConstPointer
 
typedef SmartPointer< SelfPointer
 
typedef Object Self
 
typedef LightObject Superclass
 
- Public Types inherited from itk::LightObject
typedef SmartPointer< const SelfConstPointer
 
typedef SmartPointer< SelfPointer
 
typedef LightObject Self
 

Public Member Functions

virtual ::itk::LightObject::Pointer CreateAnother (void) const
 
virtual const RealTypeGetCurrentConvergenceValue ()
 
virtual const SizeValueTypeGetCurrentIteration ()
 
virtual SizeValueType GetCurrentLevel () const
 
virtual const RealTypeGetCurrentMetricValue ()
 
virtual const bool & GetIsConverged ()
 
virtual const char * GetNameOfClass () const
 
virtual const
DecoratedOutputTransformType
GetOutput () const
 
virtual DataObjectPointer MakeOutput (DataObjectPointerArraySizeType)
 
void SetMetricSamplingPercentage (const RealType)
 
virtual void SetFixedImage (const FixedImageType *image)
 
virtual const FixedImageTypeGetFixedImage () const
 
virtual void SetFixedImage (SizeValueType, const FixedImageType *)
 
virtual const FixedImageTypeGetFixedImage (SizeValueType) const
 
virtual void SetMovingImage (const MovingImageType *image)
 
virtual const MovingImageTypeGetMovingImage () const
 
virtual void SetMovingImage (SizeValueType, const MovingImageType *)
 
virtual const MovingImageTypeGetMovingImage (SizeValueType) const
 
virtual void SetOptimizer (OptimizerType *_arg)
 
virtual OptimizerTypeGetModifiableOptimizer ()
 
virtual const OptimizerTypeGetOptimizer () const
 
virtual void SetMetric (MetricType *_arg)
 
virtual MetricTypeGetModifiableMetric ()
 
virtual const MetricTypeGetMetric () const
 
virtual void SetMetricSamplingStrategy (MetricSamplingStrategyType _arg)
 
virtual MetricSamplingStrategyType GetMetricSamplingStrategy () const
 
virtual void SetMetricSamplingPercentagePerLevel (MetricSamplingPercentageArrayType _arg)
 
virtual
MetricSamplingPercentageArrayType 
GetMetricSamplingPercentagePerLevel () const
 
virtual void SetFixedInitialTransform (InitialTransformType *_arg)
 
virtual InitialTransformTypeGetModifiableFixedInitialTransform ()
 
virtual const
InitialTransformType
GetFixedInitialTransform () const
 
virtual void SetMovingInitialTransform (InitialTransformType *_arg)
 
virtual InitialTransformTypeGetModifiableMovingInitialTransform ()
 
virtual const
InitialTransformType
GetMovingInitialTransform () const
 
void SetTransformParametersAdaptorsPerLevel (TransformParametersAdaptorsContainerType &)
 
const
TransformParametersAdaptorsContainerType
GetTransformParametersAdaptorsPerLevel () const
 
void SetNumberOfLevels (const SizeValueType)
 
virtual SizeValueType GetNumberOfLevels () const
 
void SetShrinkFactorsPerLevel (ShrinkFactorsArrayType factors)
 
ShrinkFactorsPerDimensionContainerType GetShrinkFactorsPerDimension (const unsigned int level) const
 
void SetShrinkFactorsPerDimension (unsigned int level, ShrinkFactorsPerDimensionContainerType factors)
 
virtual void SetSmoothingSigmasPerLevel (SmoothingSigmasArrayType _arg)
 
virtual SmoothingSigmasArrayType GetSmoothingSigmasPerLevel () const
 
virtual void SetSmoothingSigmasAreSpecifiedInPhysicalUnits (bool _arg)
 
virtual bool GetSmoothingSigmasAreSpecifiedInPhysicalUnits () const
 
virtual void SmoothingSigmasAreSpecifiedInPhysicalUnitsOn ()
 
virtual void SmoothingSigmasAreSpecifiedInPhysicalUnitsOff ()
 
- Public Member Functions inherited from itk::ProcessObject
virtual void AbortGenerateDataOff ()
 
virtual void AbortGenerateDataOn ()
 
virtual void EnlargeOutputRequestedRegion (DataObject *)
 
virtual const bool & GetAbortGenerateData ()
 
NameArray GetInputNames () const
 
MultiThreader * GetMultiThreader () const
 
DataObjectPointerArraySizeType GetNumberOfIndexedInputs () const
 
DataObjectPointerArraySizeType GetNumberOfInputs () const
 
DataObjectPointerArraySizeType GetNumberOfOutputs () const
 
virtual
DataObjectPointerArraySizeType 
GetNumberOfValidRequiredInputs () const
 
NameArray GetOutputNames () const
 
virtual const float & GetProgress ()
 
NameArray GetRequiredInputNames () const
 
bool HasInput (const DataObjectIdentifierType &key) const
 
bool HasOutput (const DataObjectIdentifierType &key) const
 
virtual DataObjectPointer MakeOutput (const DataObjectIdentifierType &)
 
virtual void PrepareOutputs ()
 
virtual void PropagateRequestedRegion (DataObject *output)
 
virtual void ResetPipeline ()
 
virtual void SetAbortGenerateData (bool _arg)
 
virtual void SetProgress (float _arg)
 
virtual void Update ()
 
virtual void UpdateLargestPossibleRegion ()
 
virtual void UpdateOutputData (DataObject *output)
 
virtual void UpdateOutputInformation ()
 
void UpdateProgress (float amount)
 
DataObjectPointerArray GetInputs ()
 
DataObjectPointerArray GetOutputs ()
 
DataObjectPointerArray GetIndexedInputs ()
 
DataObjectPointerArray GetIndexedOutputs ()
 
DataObjectPointerArraySizeType GetNumberOfIndexedOutputs () const
 
virtual void SetReleaseDataFlag (bool flag)
 
virtual bool GetReleaseDataFlag () const
 
void ReleaseDataFlagOn ()
 
void ReleaseDataFlagOff ()
 
virtual void SetReleaseDataBeforeUpdateFlag (bool _arg)
 
virtual const bool & GetReleaseDataBeforeUpdateFlag ()
 
virtual void ReleaseDataBeforeUpdateFlagOn ()
 
virtual void ReleaseDataBeforeUpdateFlagOff ()
 
virtual void SetNumberOfThreads (ThreadIdType _arg)
 
virtual const ThreadIdTypeGetNumberOfThreads ()
 
- Public Member Functions inherited from itk::Object
unsigned long AddObserver (const EventObject &event, Command *)
 
unsigned long AddObserver (const EventObject &event, Command *) const
 
virtual void DebugOff () const
 
virtual void DebugOn () const
 
CommandGetCommand (unsigned long tag)
 
bool GetDebug () const
 
MetaDataDictionaryGetMetaDataDictionary (void)
 
const MetaDataDictionaryGetMetaDataDictionary (void) const
 
virtual ModifiedTimeType GetMTime () const
 
virtual const TimeStampGetTimeStamp () const
 
bool HasObserver (const EventObject &event) const
 
void InvokeEvent (const EventObject &)
 
void InvokeEvent (const EventObject &) const
 
virtual void Modified () const
 
virtual void Register () const
 
void RemoveAllObservers ()
 
void RemoveObserver (unsigned long tag)
 
void SetDebug (bool debugFlag) const
 
void SetMetaDataDictionary (const MetaDataDictionary &rhs)
 
virtual void SetReferenceCount (int)
 
virtual void UnRegister () const
 
- Public Member Functions inherited from itk::LightObject
virtual void Delete ()
 
virtual int GetReferenceCount () const
 
 itkCloneMacro (Self)
 
void Print (std::ostream &os, Indent indent=0) const
 

Static Public Member Functions

static Pointer New ()
 

Static Public Attributes

static const unsigned int ImageDimension = TFixedImage::ImageDimension
 

Protected Member Functions

virtual void GenerateData ()
 
 ImageRegistrationMethodv4 ()
 
virtual void InitializeRegistrationAtEachLevel (const SizeValueType)
 
virtual void PrintSelf (std::ostream &os, Indent indent) const
 
virtual void SetMetricSamplePoints ()
 
virtual ~ImageRegistrationMethodv4 ()
 
- Protected Member Functions inherited from itk::ProcessObject
virtual void AddInput (DataObject *input)
 
virtual void AddOutput (DataObject *output)
 
virtual void CacheInputReleaseDataFlags ()
 
virtual void GenerateInputRequestedRegion ()
 
virtual void GenerateOutputInformation ()
 
virtual void GenerateOutputRequestedRegion (DataObject *output)
 
virtual const
DataObjectPointerArraySizeType
GetNumberOfRequiredOutputs ()
 
bool IsIndexedInputName (const DataObjectIdentifierType &) const
 
bool IsIndexedOutputName (const DataObjectIdentifierType &) const
 
 itkLegacyMacro (virtual void RemoveOutput(DataObject *output))
 
 itkLegacyMacro (void SetNumberOfOutputs(DataObjectPointerArraySizeType num))
 
 itkLegacyMacro (virtual void RemoveInput(DataObject *input))
 
 itkLegacyMacro (void SetNumberOfInputs(DataObjectPointerArraySizeType num))
 
DataObjectPointerArraySizeType MakeIndexFromInputName (const DataObjectIdentifierType &name) const
 
DataObjectPointerArraySizeType MakeIndexFromOutputName (const DataObjectIdentifierType &name) const
 
DataObjectIdentifierType MakeNameFromInputIndex (DataObjectPointerArraySizeType idx) const
 
DataObjectIdentifierType MakeNameFromOutputIndex (DataObjectPointerArraySizeType idx) const
 
 ProcessObject ()
 
virtual void PropagateResetPipeline ()
 
virtual void ReleaseInputs ()
 
virtual void RemoveInput (const DataObjectIdentifierType &key)
 
virtual void RemoveInput (DataObjectPointerArraySizeType)
 
virtual void RemoveOutput (const DataObjectIdentifierType &key)
 
virtual void RemoveOutput (DataObjectPointerArraySizeType idx)
 
virtual void RestoreInputReleaseDataFlags ()
 
virtual void SetInput (const DataObjectIdentifierType &key, DataObject *input)
 
virtual void SetNthInput (DataObjectPointerArraySizeType num, DataObject *input)
 
virtual void SetNthOutput (DataObjectPointerArraySizeType num, DataObject *output)
 
void SetNumberOfIndexedInputs (DataObjectPointerArraySizeType num)
 
void SetNumberOfIndexedOutputs (DataObjectPointerArraySizeType num)
 
virtual void SetNumberOfRequiredOutputs (DataObjectPointerArraySizeType _arg)
 
virtual void SetOutput (const DataObjectIdentifierType &key, DataObject *output)
 
virtual void SetPrimaryInput (DataObject *input)
 
virtual void SetPrimaryOutput (DataObject *output)
 
virtual void VerifyInputInformation ()
 
virtual void VerifyPreconditions ()
 
 ~ProcessObject ()
 
DataObjectGetInput (const DataObjectIdentifierType &key)
 
const DataObjectGetInput (const DataObjectIdentifierType &key) const
 
DataObjectGetInput (DataObjectPointerArraySizeType idx)
 
const DataObjectGetInput (DataObjectPointerArraySizeType idx) const
 
virtual void PushBackInput (const DataObject *input)
 
virtual void PopBackInput ()
 
virtual void PushFrontInput (const DataObject *input)
 
virtual void PopFrontInput ()
 
DataObjectGetPrimaryInput ()
 
const DataObjectGetPrimaryInput () const
 
virtual void SetPrimaryInputName (const DataObjectIdentifierType &key)
 
virtual const char * GetPrimaryInputName (void) const
 
virtual void SetNumberOfRequiredInputs (DataObjectPointerArraySizeType)
 
virtual const
DataObjectPointerArraySizeType
GetNumberOfRequiredInputs ()
 
bool AddRequiredInputName (const DataObjectIdentifierType &)
 
bool AddRequiredInputName (const DataObjectIdentifierType &, DataObjectPointerArraySizeType idx)
 
bool RemoveRequiredInputName (const DataObjectIdentifierType &)
 
bool IsRequiredInputName (const DataObjectIdentifierType &) const
 
void SetRequiredInputNames (const NameArray &)
 
DataObjectGetOutput (const DataObjectIdentifierType &key)
 
const DataObjectGetOutput (const DataObjectIdentifierType &key) const
 
virtual void SetPrimaryOutputName (const DataObjectIdentifierType &key)
 
virtual const char * GetPrimaryOutputName (void) const
 
DataObjectGetOutput (DataObjectPointerArraySizeType idx)
 
const DataObjectGetOutput (DataObjectPointerArraySizeType idx) const
 
DataObjectGetPrimaryOutput ()
 
const DataObjectGetPrimaryOutput () const
 
- Protected Member Functions inherited from itk::Object
 Object ()
 
bool PrintObservers (std::ostream &os, Indent indent) const
 
virtual void SetTimeStamp (const TimeStamp &time)
 
virtual ~Object ()
 
- Protected Member Functions inherited from itk::LightObject
virtual LightObject::Pointer InternalClone () const
 
 LightObject ()
 
virtual void PrintHeader (std::ostream &os, Indent indent) const
 
virtual void PrintTrailer (std::ostream &os, Indent indent) const
 
virtual ~LightObject ()
 

Protected Attributes

CompositeTransformPointer m_CompositeTransform
 
RealType m_CurrentConvergenceValue
 
SizeValueType m_CurrentIteration
 
SizeValueType m_CurrentLevel
 
RealType m_CurrentMetricValue
 
InitialTransformPointer m_FixedInitialTransform
 
FixedImagesContainerType m_FixedSmoothImages
 
bool m_IsConverged
 
MetricPointer m_Metric
 
MetricSamplingPercentageArrayType m_MetricSamplingPercentagePerLevel
 
MetricSamplingStrategyType m_MetricSamplingStrategy
 
InitialTransformPointer m_MovingInitialTransform
 
MovingImagesContainerType m_MovingSmoothImages
 
SizeValueType m_NumberOfFixedImages
 
SizeValueType m_NumberOfLevels
 
SizeValueType m_NumberOfMovingImages
 
OptimizerPointer m_Optimizer
 
OutputTransformPointer m_OutputTransform
 
std::vector
< ShrinkFactorsPerDimensionContainerType
m_ShrinkFactorsPerLevel
 
bool m_SmoothingSigmasAreSpecifiedInPhysicalUnits
 
SmoothingSigmasArrayType m_SmoothingSigmasPerLevel
 
TransformParametersAdaptorsContainerType m_TransformParametersAdaptorsPerLevel
 
- Protected Attributes inherited from itk::ProcessObject
TimeStamp m_OutputInformationMTime
 
bool m_Updating
 

Private Member Functions

 ImageRegistrationMethodv4 (const Self &)
 
void operator= (const Self &)
 

Additional Inherited Members

- Protected Types inherited from itk::LightObject
typedef int InternalReferenceCountType
 

Member Typedef Documentation

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
typedef CompositeTransformType::Pointer itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::CompositeTransformPointer

Definition at line 134 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
typedef CompositeTransform<RealType, ImageDimension> itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::CompositeTransformType

Definition at line 133 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
typedef SmartPointer<const Self> itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::ConstPointer

Definition at line 97 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
typedef ProcessObject::DataObjectPointerArraySizeType itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::DataObjectPointerArraySizeType

Make a DataObject of the correct type to be used as the specified output.

Definition at line 300 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
typedef DecoratedOutputTransformType::Pointer itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::DecoratedOutputTransformPointer

Definition at line 141 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
typedef DataObjectDecorator<OutputTransformType> itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::DecoratedOutputTransformType

Type for the output: Using Decorator pattern for enabling the transform to be passed in the data pipeline

Definition at line 140 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
typedef OutputTransformType::DerivativeType itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::DerivativeType

Definition at line 127 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
typedef DerivativeType::ValueType itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::DerivativeValueType

Definition at line 128 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
typedef FixedImageType::Pointer itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::FixedImagePointer

Definition at line 110 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
typedef std::vector<FixedImagePointer> itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::FixedImagesContainerType

Definition at line 111 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
typedef TFixedImage itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::FixedImageType

Input typedefs for the images and transforms.

Definition at line 106 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
typedef ImageToImageMetricv4<FixedImageType, MovingImageType> itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::ImageMetricType

Definition at line 121 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
typedef InitialTransformType::Pointer itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::InitialTransformPointer

Definition at line 131 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
typedef Transform<RealType, ImageDimension, ImageDimension> itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::InitialTransformType

Definition at line 130 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
typedef MetricType::Pointer itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::MetricPointer

Definition at line 118 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
typedef ImageMetricType::FixedSampledPointSetType itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::MetricSamplePointSetType

Definition at line 163 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
typedef Array<RealType> itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::MetricSamplingPercentageArrayType

Definition at line 149 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
typedef ObjectToObjectMetricBase itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::MetricType

Metric and transform typedefs

Definition at line 117 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
typedef MovingImageType::Pointer itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::MovingImagePointer

Definition at line 113 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
typedef std::vector<MovingImagePointer> itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::MovingImagesContainerType

Definition at line 114 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
typedef TMovingImage itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::MovingImageType

Definition at line 112 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
typedef ObjectToObjectMultiMetricv4<ImageDimension, ImageDimension> itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::MultiMetricType

Definition at line 120 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
typedef OptimizerType::Pointer itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::OptimizerPointer

Definition at line 158 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
typedef ObjectToObjectOptimizerBase itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::OptimizerType

Type of the optimizer.

Definition at line 157 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
typedef OutputTransformType::Pointer itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::OutputTransformPointer

Definition at line 125 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
typedef TOutputTransform itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::OutputTransformType

Definition at line 124 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
typedef SmartPointer<Self> itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::Pointer

Definition at line 96 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
typedef OutputTransformType::ScalarType itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::RealType

Definition at line 126 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
typedef ImageRegistrationMethodv4 itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::Self

Standard class typedefs.

Definition at line 94 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
typedef Array<SizeValueType> itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::ShrinkFactorsArrayType

Definition at line 146 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
typedef ShrinkFilterType::ShrinkFactorsType itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::ShrinkFactorsPerDimensionContainerType

Definition at line 144 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
typedef ShrinkImageFilter<FixedImageType, VirtualImageType> itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::ShrinkFilterType

Definition at line 143 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
typedef Array<RealType> itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::SmoothingSigmasArrayType

Definition at line 148 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
typedef ProcessObject itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::Superclass

Definition at line 95 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
typedef TransformParametersAdaptorType::Pointer itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::TransformParametersAdaptorPointer

Definition at line 153 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
typedef std::vector<TransformParametersAdaptorPointer> itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::TransformParametersAdaptorsContainerType

Definition at line 154 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
typedef TransformParametersAdaptor<OutputTransformType> itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::TransformParametersAdaptorType

Transform adaptor typedefs

Definition at line 152 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
typedef ImageMetricType::VirtualImageType itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::VirtualImageType

Definition at line 122 of file itkImageRegistrationMethodv4.h.

Member Enumeration Documentation

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
enum itk::ImageRegistrationMethodv4::MetricSamplingStrategyType

enum type for metric sampling strategy

Enumerator
NONE 
REGULAR 
RANDOM 

Definition at line 161 of file itkImageRegistrationMethodv4.h.

Constructor & Destructor Documentation

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::ImageRegistrationMethodv4 ( )
protected
template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
virtual itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::~ImageRegistrationMethodv4 ( )
protectedvirtual
template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::ImageRegistrationMethodv4 ( const Self )
private

Member Function Documentation

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
virtual::itk::LightObject::Pointer itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::CreateAnother ( void  ) const
virtual

Create an object from an instance, potentially deferring to a factory. This method allows you to create an instance of an object that is exactly the same type as the referring object. This is useful in cases where an object has been cast back to a base class.

Reimplemented from itk::Object.

Reimplemented in itk::TimeVaryingBSplineVelocityFieldImageRegistrationMethod< TFixedImage, TMovingImage, TOutputTransform >, itk::TimeVaryingVelocityFieldImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >, and itk::SyNImageRegistrationMethod< TFixedImage, TMovingImage, TOutputTransform >.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
virtual void itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::GenerateData ( )
protectedvirtual
template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
virtual const RealType& itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::GetCurrentConvergenceValue ( )
virtual

Get the current convergence value. This is a helper function for reporting observations.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
virtual const SizeValueType& itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::GetCurrentIteration ( )
virtual

Get the current iteration. This is a helper function for reporting observations.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
virtual SizeValueType itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::GetCurrentLevel ( ) const
virtual

Get the current level. This is a helper function for reporting observations.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
virtual const RealType& itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::GetCurrentMetricValue ( )
virtual
template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
virtual const FixedImageType* itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::GetFixedImage ( void  ) const
inlinevirtual

Set/get the fixed images.

Definition at line 170 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
virtual const FixedImageType* itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::GetFixedImage ( SizeValueType  ) const
virtual

Set/get the fixed images.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
virtual const InitialTransformType* itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::GetFixedInitialTransform ( ) const
virtual

Set/Get the initial fixed transform.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
virtual const bool& itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::GetIsConverged ( )
virtual

Get the current convergence state per level. This is a helper function for reporting observations.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
virtual const MetricType* itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::GetMetric ( ) const
virtual

Set/Get the metric.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
virtual MetricSamplingPercentageArrayType itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::GetMetricSamplingPercentagePerLevel ( ) const
virtual

Set the metric sampling percentage.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
virtual MetricSamplingStrategyType itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::GetMetricSamplingStrategy ( ) const
virtual

Set/Get the metric sampling strategy.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
virtual InitialTransformType* itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::GetModifiableFixedInitialTransform ( )
virtual

Set/Get the initial fixed transform.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
virtual MetricType* itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::GetModifiableMetric ( )
virtual

Set/Get the metric.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
virtual InitialTransformType* itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::GetModifiableMovingInitialTransform ( )
virtual

Set/Get the initial moving transform.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
virtual OptimizerType* itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::GetModifiableOptimizer ( )
virtual

Set/Get the optimizer.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
virtual const MovingImageType* itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::GetMovingImage ( void  ) const
inlinevirtual

Set the moving images.

Definition at line 183 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
virtual const MovingImageType* itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::GetMovingImage ( SizeValueType  ) const
virtual

Set the moving images.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
virtual const InitialTransformType* itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::GetMovingInitialTransform ( ) const
virtual

Set/Get the initial moving transform.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
virtual const char* itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::GetNameOfClass ( ) const
virtual
template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
virtual SizeValueType itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::GetNumberOfLevels ( ) const
virtual

Set/Get the number of multi-resolution levels. In setting the number of levels we need to set the following for each level:

  • shrink factors for the virtual domain
  • sigma smoothing parameter
  • transform adaptor with specific parameters for the specified level
template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
virtual const OptimizerType* itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::GetOptimizer ( ) const
virtual

Set/Get the optimizer.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
virtual const DecoratedOutputTransformType* itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::GetOutput ( ) const
virtual

Returns the transform resulting from the registration process

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
ShrinkFactorsPerDimensionContainerType itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::GetShrinkFactorsPerDimension ( const unsigned int  level) const
inline

Get the shrink factors for a specific level.

Definition at line 261 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
virtual bool itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::GetSmoothingSigmasAreSpecifiedInPhysicalUnits ( ) const
virtual

Set/Get whether to specify the smoothing sigmas for each level in physical units (default) or in terms of voxels.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
virtual SmoothingSigmasArrayType itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::GetSmoothingSigmasPerLevel ( ) const
virtual

Set/Get the smoothing sigmas for each level. At each resolution level, a gaussian smoothing filter (specifically, the itkDiscreteGaussianImageFilter) is applied. Sigma values are specified according to the option m_SmoothingSigmasAreSpecifiedInPhysicalUnits.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
const TransformParametersAdaptorsContainerType& itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::GetTransformParametersAdaptorsPerLevel ( ) const

Set/Get the transform adaptors.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
virtual void itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::InitializeRegistrationAtEachLevel ( const SizeValueType  )
protectedvirtual
template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
virtual DataObjectPointer itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::MakeOutput ( DataObjectPointerArraySizeType  idx)
virtual

Make a DataObject of the correct type to used as the specified output. Every ProcessObject subclass must be able to create a DataObject that can be used as a specified output. This method is automatically called when DataObject::DisconnectPipeline() is called. DataObject::DisconnectPipeline, disconnects a data object from being an output of its current source. When the data object is disconnected, the ProcessObject needs to construct a replacement output data object so that the ProcessObject is in a valid state. So DataObject::DisconnectPipeline eventually calls ProcessObject::MakeOutput. Note that MakeOutput always returns a itkSmartPointer to a DataObject. ImageSource and MeshSource override this method to create the correct type of image and mesh respectively. If a filter has multiple outputs of different types, then that filter must provide an implementation of MakeOutput().

Reimplemented from itk::ProcessObject.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
static Pointer itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::New ( )
static

Method for creation through the object factory.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
void itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::operator= ( const Self )
private
template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
virtual void itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::PrintSelf ( std::ostream &  os,
Indent  indent 
) const
protectedvirtual

Methods invoked by Print() to print information about the object including superclasses. Typically not called by the user (use Print() instead) but used in the hierarchical print process to combine the output of several classes.

Reimplemented from itk::ProcessObject.

Reimplemented in itk::SyNImageRegistrationMethod< TFixedImage, TMovingImage, TOutputTransform >, itk::TimeVaryingBSplineVelocityFieldImageRegistrationMethod< TFixedImage, TMovingImage, TOutputTransform >, and itk::TimeVaryingVelocityFieldImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
virtual void itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::SetFixedImage ( const FixedImageType image)
inlinevirtual

Set/get the fixed images.

Definition at line 166 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
virtual void itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::SetFixedImage ( SizeValueType  ,
const FixedImageType  
)
virtual

Set/get the fixed images.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
virtual void itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::SetFixedInitialTransform ( InitialTransformType _arg)
virtual

Set/Get the initial fixed transform.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
virtual void itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::SetMetric ( MetricType _arg)
virtual

Set/Get the metric.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
virtual void itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::SetMetricSamplePoints ( )
protectedvirtual

Get metric samples.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
void itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::SetMetricSamplingPercentage ( const RealType  )

Set the metric sampling percentage.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
virtual void itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::SetMetricSamplingPercentagePerLevel ( MetricSamplingPercentageArrayType  _arg)
virtual

Set the metric sampling percentage.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
virtual void itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::SetMetricSamplingStrategy ( MetricSamplingStrategyType  _arg)
virtual

Set/Get the metric sampling strategy.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
virtual void itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::SetMovingImage ( const MovingImageType image)
inlinevirtual

Set the moving images.

Definition at line 179 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
virtual void itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::SetMovingImage ( SizeValueType  ,
const MovingImageType  
)
virtual

Set the moving images.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
virtual void itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::SetMovingInitialTransform ( InitialTransformType _arg)
virtual

Set/Get the initial moving transform.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
void itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::SetNumberOfLevels ( const SizeValueType  )

Set/Get the number of multi-resolution levels. In setting the number of levels we need to set the following for each level:

  • shrink factors for the virtual domain
  • sigma smoothing parameter
  • transform adaptor with specific parameters for the specified level
template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
virtual void itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::SetOptimizer ( OptimizerType _arg)
virtual

Set/Get the optimizer.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
void itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::SetShrinkFactorsPerDimension ( unsigned int  level,
ShrinkFactorsPerDimensionContainerType  factors 
)
inline

Set the shrink factors for a specific level for each dimension.

Definition at line 274 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
void itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::SetShrinkFactorsPerLevel ( ShrinkFactorsArrayType  factors)
inline

Set the shrink factors for each level where each level has a constant shrink factor for each dimension. For example, input to the function of factors = [4,2,1] will shrink the image in every dimension by 4 the first level, then by 2 at the second level, then the original resolution for the final level (uses the itkShrinkImageFilter).

Definition at line 247 of file itkImageRegistrationMethodv4.h.

References itk::FixedArray< TValueType, VLength >::Fill(), and itk::Array< TValueType >::Size().

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
virtual void itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::SetSmoothingSigmasAreSpecifiedInPhysicalUnits ( bool  _arg)
virtual

Set/Get whether to specify the smoothing sigmas for each level in physical units (default) or in terms of voxels.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
virtual void itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::SetSmoothingSigmasPerLevel ( SmoothingSigmasArrayType  _arg)
virtual

Set/Get the smoothing sigmas for each level. At each resolution level, a gaussian smoothing filter (specifically, the itkDiscreteGaussianImageFilter) is applied. Sigma values are specified according to the option m_SmoothingSigmasAreSpecifiedInPhysicalUnits.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
void itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::SetTransformParametersAdaptorsPerLevel ( TransformParametersAdaptorsContainerType )

Set/Get the transform adaptors.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
virtual void itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::SmoothingSigmasAreSpecifiedInPhysicalUnitsOff ( )
virtual

Set/Get whether to specify the smoothing sigmas for each level in physical units (default) or in terms of voxels.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
virtual void itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::SmoothingSigmasAreSpecifiedInPhysicalUnitsOn ( )
virtual

Set/Get whether to specify the smoothing sigmas for each level in physical units (default) or in terms of voxels.

Member Data Documentation

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
const unsigned int itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::ImageDimension = TFixedImage::ImageDimension
static

ImageDimension constants

Definition at line 103 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
CompositeTransformPointer itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::m_CompositeTransform
protected

Definition at line 386 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
RealType itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::m_CurrentConvergenceValue
protected

Definition at line 363 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
SizeValueType itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::m_CurrentIteration
protected

Definition at line 361 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
SizeValueType itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::m_CurrentLevel
protected

Definition at line 359 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
RealType itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::m_CurrentMetricValue
protected

Definition at line 362 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
InitialTransformPointer itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::m_FixedInitialTransform
protected

Definition at line 382 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
FixedImagesContainerType itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::m_FixedSmoothImages
protected

Definition at line 366 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
bool itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::m_IsConverged
protected

Definition at line 364 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
MetricPointer itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::m_Metric
protected

Definition at line 373 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
MetricSamplingPercentageArrayType itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::m_MetricSamplingPercentagePerLevel
protected

Definition at line 375 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
MetricSamplingStrategyType itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::m_MetricSamplingStrategy
protected

Definition at line 374 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
InitialTransformPointer itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::m_MovingInitialTransform
protected

Definition at line 381 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
MovingImagesContainerType itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::m_MovingSmoothImages
protected

Definition at line 367 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
SizeValueType itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::m_NumberOfFixedImages
protected

Definition at line 368 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
SizeValueType itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::m_NumberOfLevels
protected

Definition at line 360 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
SizeValueType itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::m_NumberOfMovingImages
protected

Definition at line 369 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
OptimizerPointer itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::m_Optimizer
protected

Definition at line 371 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
OutputTransformPointer itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::m_OutputTransform
protected

Definition at line 388 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
std::vector<ShrinkFactorsPerDimensionContainerType> itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::m_ShrinkFactorsPerLevel
protected

Definition at line 377 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
bool itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::m_SmoothingSigmasAreSpecifiedInPhysicalUnits
protected

Definition at line 379 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
SmoothingSigmasArrayType itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::m_SmoothingSigmasPerLevel
protected

Definition at line 378 of file itkImageRegistrationMethodv4.h.

template<typename TFixedImage , typename TMovingImage , typename TOutputTransform >
TransformParametersAdaptorsContainerType itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::m_TransformParametersAdaptorsPerLevel
protected

Definition at line 384 of file itkImageRegistrationMethodv4.h.


The documentation for this class was generated from the following file: