ITK  4.4.0
Insight Segmentation and Registration Toolkit
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itk::LabelImageGaussianInterpolateImageFunction< TInputImage, TCoordRep, TPixelCompare > Class Template Reference
Module ITKImageFunction

#include <itkLabelImageGaussianInterpolateImageFunction.h>

+ Inheritance diagram for itk::LabelImageGaussianInterpolateImageFunction< TInputImage, TCoordRep, TPixelCompare >:
+ Collaboration diagram for itk::LabelImageGaussianInterpolateImageFunction< TInputImage, TCoordRep, TPixelCompare >:

Detailed Description

template<class TInputImage, class TCoordRep = double, class TPixelCompare = std::less<typename itk::NumericTraits<typename TInputImage::PixelType>::RealType>>
class itk::LabelImageGaussianInterpolateImageFunction< TInputImage, TCoordRep, TPixelCompare >

Interpolation function for multi-label images that implicitly smooths each unique value in the image corresponding to each label set element and returns the corresponding label set element with the largest wieght.

This filter is an alternative to nearest neighbor interpolation for multi-label images. Given a multi-label image I with label set L, this function returns a label at the non-voxel position I(x), based on the following rule

\[ I(x) = \arg\max_{l \in L} (G_\sigma * I_l)(x) \]

Where $ I_l $ is the l-th binary component of the multilabel image. In other words, each label in the multi-label image is convolved with a Gaussian, and the label for which the response is largest is returned. For sigma=0, this is just nearest neighbor interpolation.

This class defines an N-dimensional Gaussian interpolation function for label using the vnl error function. The two parameters associated with this function are:

Note
The input image can be of any type, but the number of unique intensity values in the image will determine the amount of memory needed to complete each interpolation.
Author
Paul Yushkevich
Nick Tustison

Definition at line 63 of file itkLabelImageGaussianInterpolateImageFunction.h.

Public Types

typedef Superclass::ArrayType ArrayType
 
typedef SmartPointer< const Self > ConstPointer
 
typedef
Superclass::ContinuousIndexType 		ContinuousIndexType
 
typedef Superclass::IndexType IndexType
 
typedef Superclass::InputImageType InputImageType
 
typedef TInputImage::PixelType InputPixelType
 
typedef Superclass::OutputType OutputType
 
typedef SmartPointer< Self > Pointer
 
typedef Superclass::RealType RealType
 
typedef
LabelImageGaussianInterpolateImageFunction 		Self
 
typedef
GaussianInterpolateImageFunction
< TInputImage, TCoordRep > 		Superclass
 
- Public Types inherited from itk::GaussianInterpolateImageFunction< TInputImage, TCoordRep >
typedef FixedArray< RealType,
ImageDimension > 		ArrayType
 
typedef SmartPointer< const Self > ConstPointer
 
typedef
Superclass::ContinuousIndexType 		ContinuousIndexType
 
typedef Superclass::IndexType IndexType
 
typedef Superclass::InputImageType InputImageType
 
typedef Superclass::OutputType OutputType
 
typedef SmartPointer< Self > Pointer
 
typedef Superclass::RealType RealType
 
typedef
GaussianInterpolateImageFunction 		Self
 
typedef
InterpolateImageFunction
< TInputImage, TCoordRep > 		Superclass
 
- Public Types inherited from itk::InterpolateImageFunction< TInputImage, TCoordRep >
typedef SmartPointer< const Self > ConstPointer
 
typedef
Superclass::ContinuousIndexType 		ContinuousIndexType
 
typedef Superclass::IndexType IndexType
 
typedef Superclass::IndexValueType IndexValueType
 
typedef Superclass::InputImageType InputImageType
 
typedef Superclass::OutputType OutputType
 
typedef SmartPointer< Self > Pointer
 
typedef Superclass::PointType PointType
 
typedef NumericTraits
< typename
TInputImage::PixelType >
::RealType 		RealType
 
typedef InterpolateImageFunction Self
 
typedef ImageFunction
< TInputImage, typename
NumericTraits< typename
TInputImage::PixelType >
::RealType, TCoordRep > 		Superclass
 
- Public Types inherited from itk::ImageFunction< TInputImage, NumericTraits< TInputImage::PixelType >::RealType, TCoordRep >
typedef SmartPointer< const Self > ConstPointer
 
typedef ContinuousIndex
< TCoordRep,
itkGetStaticConstMacro(ImageDimension) > 		ContinuousIndexType
 
typedef TCoordRep CoordRepType
 
typedef InputImageType::IndexType IndexType
 
typedef
InputImageType::IndexValueType 		IndexValueType
 
typedef
InputImageType::ConstPointer 		InputImageConstPointer
 
typedef TInputImage InputImageType
 
typedef InputImageType::PixelType InputPixelType
 
typedef NumericTraits
< TInputImage::PixelType >
::RealType 		OutputType
 
typedef SmartPointer< Self > Pointer
 
typedef Point< TCoordRep,
itkGetStaticConstMacro(ImageDimension) > 		PointType
 
typedef ImageFunction Self
 
typedef FunctionBase< Point
< TCoordRep,
itkGetStaticConstMacro(ImageDimension) >
, NumericTraits
< TInputImage::PixelType >
::RealType > 		Superclass
 
- Public Types inherited from itk::FunctionBase< Point< TCoordRep, TInputImage::ImageDimension >, NumericTraits< TInputImage::PixelType >::RealType >
typedef SmartPointer< const Self > ConstPointer
 
typedef Point< TCoordRep,
TInputImage::ImageDimension > 		InputType
 
typedef NumericTraits
< TInputImage::PixelType >
::RealType 		OutputType
 
typedef SmartPointer< Self > Pointer
 
typedef FunctionBase Self
 
typedef Object Superclass
 
- Public Types inherited from itk::Object
typedef SmartPointer< const Self > ConstPointer
 
typedef SmartPointer< Self > Pointer
 
typedef Object Self
 
typedef LightObject Superclass
 
- Public Types inherited from itk::LightObject
typedef SmartPointer< const Self > ConstPointer
 
typedef SmartPointer< Self > Pointer
 
typedef LightObject Self
 

Public Member Functions

virtual ::itk::LightObject::Pointer CreateAnother (void) const
 
virtual OutputType EvaluateAtContinuousIndex (const ContinuousIndexType &cindex) const
 
virtual const char * GetNameOfClass () const
 
- Public Member Functions inherited from itk::GaussianInterpolateImageFunction< TInputImage, TCoordRep >
virtual void SetInputImage (const TInputImage *image)
 
virtual void SetSigma (const ArrayType s)
 
virtual void SetSigma (RealType *s)
 
virtual ArrayType GetSigma () const
 
virtual void SetAlpha (const RealType a)
 
virtual RealType GetAlpha () const
 
virtual void SetParameters (RealType *sigma, RealType alpha)
 
- Public Member Functions inherited from itk::InterpolateImageFunction< TInputImage, TCoordRep >
virtual OutputType Evaluate (const PointType &point) const
 
virtual OutputType EvaluateAtIndex (const IndexType &index) const
 
- Public Member Functions inherited from itk::ImageFunction< TInputImage, NumericTraits< TInputImage::PixelType >::RealType, TCoordRep >
void ConvertContinuousIndexToNearestIndex (const ContinuousIndexType &cindex, IndexType &index) const
 
void ConvertPointToContinuousIndex (const PointType &point, ContinuousIndexType &cindex) const
 
void ConvertPointToNearestIndex (const PointType &point, IndexType &index) const
 
virtual NumericTraits
< TInputImage::PixelType >
::RealType 		EvaluateAtContinuousIndex (const ContinuousIndexType &index) const =0
 
virtual NumericTraits
< TInputImage::PixelType >
::RealType 		EvaluateAtIndex (const IndexType &index) const =0
 
virtual const ContinuousIndexType & GetEndContinuousIndex ()
 
virtual const IndexType & GetEndIndex ()
 
const InputImageType * GetInputImage () const
 
virtual const ContinuousIndexType & GetStartContinuousIndex ()
 
virtual const IndexType & GetStartIndex ()
 
virtual bool IsInsideBuffer (const IndexType &index) const
 
virtual bool IsInsideBuffer (const ContinuousIndexType &index) const
 
virtual bool IsInsideBuffer (const PointType &point) const
 
- Public Member Functions inherited from itk::FunctionBase< Point< TCoordRep, TInputImage::ImageDimension >, NumericTraits< TInputImage::PixelType >::RealType >
virtual OutputType Evaluate (const InputType &input) const =0
 
- Public Member Functions inherited from itk::Object
unsigned long AddObserver (const EventObject &event, Command *)
 
unsigned long AddObserver (const EventObject &event, Command *) const
 
virtual void DebugOff () const
 
virtual void DebugOn () const
 
Command * GetCommand (unsigned long tag)
 
bool GetDebug () const
 
MetaDataDictionary & GetMetaDataDictionary (void)
 
const MetaDataDictionary & GetMetaDataDictionary (void) const
 
virtual ModifiedTimeType GetMTime () const
 
virtual const TimeStamp & GetTimeStamp () const
 
bool HasObserver (const EventObject &event) const
 
void InvokeEvent (const EventObject &)
 
void InvokeEvent (const EventObject &) const
 
virtual void Modified () const
 
virtual void Register () const
 
void RemoveAllObservers ()
 
void RemoveObserver (unsigned long tag)
 
void SetDebug (bool debugFlag) const
 
void SetMetaDataDictionary (const MetaDataDictionary &rhs)
 
virtual void SetReferenceCount (int)
 
virtual void UnRegister () const
 
- Public Member Functions inherited from itk::LightObject
virtual void Delete ()
 
virtual int GetReferenceCount () const
 
 itkCloneMacro (Self)
 
void Print (std::ostream &os, Indent indent=0) const
 

Static Public Member Functions

static Pointer New ()
 
- Static Public Member Functions inherited from itk::GaussianInterpolateImageFunction< TInputImage, TCoordRep >
static Pointer New ()
 

Static Public Attributes

static const unsigned int ImageDimension = TInputImage::ImageDimension
 
- Static Public Attributes inherited from itk::GaussianInterpolateImageFunction< TInputImage, TCoordRep >
static const unsigned int ImageDimension = TInputImage::ImageDimension
 
- Static Public Attributes inherited from itk::InterpolateImageFunction< TInputImage, TCoordRep >
static const unsigned int ImageDimension = Superclass::ImageDimension
 
- Static Public Attributes inherited from itk::ImageFunction< TInputImage, NumericTraits< TInputImage::PixelType >::RealType, TCoordRep >
static const unsigned int ImageDimension
 

Protected Member Functions

 LabelImageGaussianInterpolateImageFunction ()
 
 ~LabelImageGaussianInterpolateImageFunction ()
 
- Protected Member Functions inherited from itk::GaussianInterpolateImageFunction< TInputImage, TCoordRep >
virtual void ComputeBoundingBox ()
 
virtual void ComputeErrorFunctionArray (unsigned int dimension, RealType cindex, vnl_vector< RealType > &erfArray, vnl_vector< RealType > &gerfArray, bool evaluateGradient=false) const
 
 GaussianInterpolateImageFunction ()
 
void PrintSelf (std::ostream &os, Indent indent) const
 
 ~GaussianInterpolateImageFunction ()
 
- Protected Member Functions inherited from itk::InterpolateImageFunction< TInputImage, TCoordRep >
 InterpolateImageFunction ()
 
void PrintSelf (std::ostream &os, Indent indent) const
 
 ~InterpolateImageFunction ()
 
- Protected Member Functions inherited from itk::ImageFunction< TInputImage, NumericTraits< TInputImage::PixelType >::RealType, TCoordRep >
 ImageFunction ()
 
void PrintSelf (std::ostream &os, Indent indent) const
 
 ~ImageFunction ()
 
- Protected Member Functions inherited from itk::FunctionBase< Point< TCoordRep, TInputImage::ImageDimension >, NumericTraits< TInputImage::PixelType >::RealType >
 FunctionBase ()
 
 ~FunctionBase ()
 
- Protected Member Functions inherited from itk::Object
 Object ()
 
bool PrintObservers (std::ostream &os, Indent indent) const
 
virtual void SetTimeStamp (const TimeStamp &time)
 
virtual ~Object ()
 
- Protected Member Functions inherited from itk::LightObject
virtual LightObject::Pointer InternalClone () const
 
 LightObject ()
 
virtual void PrintHeader (std::ostream &os, Indent indent) const
 
virtual void PrintTrailer (std::ostream &os, Indent indent) const
 
virtual ~LightObject ()
 

Private Member Functions

virtual OutputType EvaluateAtContinuousIndex (const ContinuousIndexType &, OutputType *) const
 
 LabelImageGaussianInterpolateImageFunction (const Self &)
 
void operator= (const Self &)
 

Additional Inherited Members

- Protected Types inherited from itk::LightObject
typedef int InternalReferenceCountType
 
- Protected Attributes inherited from itk::GaussianInterpolateImageFunction< TInputImage, TCoordRep >
RealType m_Alpha
 
ArrayType m_BoundingBoxEnd
 
ArrayType m_BoundingBoxStart
 
ArrayType m_CutoffDistance
 
ArrayType m_ScalingFactor
 
ArrayType m_Sigma
 

Member Typedef Documentation

template<class TInputImage , class TCoordRep = double, class TPixelCompare = std::less<typename itk::NumericTraits<typename TInputImage::PixelType>::RealType>>
typedef Superclass::ArrayType itk::LabelImageGaussianInterpolateImageFunction< TInputImage, TCoordRep, TPixelCompare >::ArrayType

Array typedef support

Definition at line 99 of file itkLabelImageGaussianInterpolateImageFunction.h.

template<class TInputImage , class TCoordRep = double, class TPixelCompare = std::less<typename itk::NumericTraits<typename TInputImage::PixelType>::RealType>>
typedef SmartPointer<const Self> itk::LabelImageGaussianInterpolateImageFunction< TInputImage, TCoordRep, TPixelCompare >::ConstPointer

Definition at line 71 of file itkLabelImageGaussianInterpolateImageFunction.h.

template<class TInputImage , class TCoordRep = double, class TPixelCompare = std::less<typename itk::NumericTraits<typename TInputImage::PixelType>::RealType>>
typedef Superclass::ContinuousIndexType itk::LabelImageGaussianInterpolateImageFunction< TInputImage, TCoordRep, TPixelCompare >::ContinuousIndexType

ContinuousIndex typedef support.

Definition at line 96 of file itkLabelImageGaussianInterpolateImageFunction.h.

template<class TInputImage , class TCoordRep = double, class TPixelCompare = std::less<typename itk::NumericTraits<typename TInputImage::PixelType>::RealType>>
typedef Superclass::IndexType itk::LabelImageGaussianInterpolateImageFunction< TInputImage, TCoordRep, TPixelCompare >::IndexType

Index typedef support.

Definition at line 93 of file itkLabelImageGaussianInterpolateImageFunction.h.

template<class TInputImage , class TCoordRep = double, class TPixelCompare = std::less<typename itk::NumericTraits<typename TInputImage::PixelType>::RealType>>
typedef Superclass::InputImageType itk::LabelImageGaussianInterpolateImageFunction< TInputImage, TCoordRep, TPixelCompare >::InputImageType

InputImageType typedef support.

Definition at line 87 of file itkLabelImageGaussianInterpolateImageFunction.h.

template<class TInputImage , class TCoordRep = double, class TPixelCompare = std::less<typename itk::NumericTraits<typename TInputImage::PixelType>::RealType>>
typedef TInputImage::PixelType itk::LabelImageGaussianInterpolateImageFunction< TInputImage, TCoordRep, TPixelCompare >::InputPixelType

Definition at line 72 of file itkLabelImageGaussianInterpolateImageFunction.h.

template<class TInputImage , class TCoordRep = double, class TPixelCompare = std::less<typename itk::NumericTraits<typename TInputImage::PixelType>::RealType>>
typedef Superclass::OutputType itk::LabelImageGaussianInterpolateImageFunction< TInputImage, TCoordRep, TPixelCompare >::OutputType

OutputType typedef support.

Definition at line 84 of file itkLabelImageGaussianInterpolateImageFunction.h.

template<class TInputImage , class TCoordRep = double, class TPixelCompare = std::less<typename itk::NumericTraits<typename TInputImage::PixelType>::RealType>>
typedef SmartPointer<Self> itk::LabelImageGaussianInterpolateImageFunction< TInputImage, TCoordRep, TPixelCompare >::Pointer

Definition at line 70 of file itkLabelImageGaussianInterpolateImageFunction.h.

template<class TInputImage , class TCoordRep = double, class TPixelCompare = std::less<typename itk::NumericTraits<typename TInputImage::PixelType>::RealType>>
typedef Superclass::RealType itk::LabelImageGaussianInterpolateImageFunction< TInputImage, TCoordRep, TPixelCompare >::RealType

RealType typedef support.

Definition at line 90 of file itkLabelImageGaussianInterpolateImageFunction.h.

template<class TInputImage , class TCoordRep = double, class TPixelCompare = std::less<typename itk::NumericTraits<typename TInputImage::PixelType>::RealType>>
typedef LabelImageGaussianInterpolateImageFunction itk::LabelImageGaussianInterpolateImageFunction< TInputImage, TCoordRep, TPixelCompare >::Self

Standard class typedefs.

Definition at line 68 of file itkLabelImageGaussianInterpolateImageFunction.h.

template<class TInputImage , class TCoordRep = double, class TPixelCompare = std::less<typename itk::NumericTraits<typename TInputImage::PixelType>::RealType>>
typedef GaussianInterpolateImageFunction<TInputImage, TCoordRep> itk::LabelImageGaussianInterpolateImageFunction< TInputImage, TCoordRep, TPixelCompare >::Superclass

Definition at line 69 of file itkLabelImageGaussianInterpolateImageFunction.h.

Constructor & Destructor Documentation

template<class TInputImage , class TCoordRep = double, class TPixelCompare = std::less<typename itk::NumericTraits<typename TInputImage::PixelType>::RealType>>
itk::LabelImageGaussianInterpolateImageFunction< TInputImage, TCoordRep, TPixelCompare >::LabelImageGaussianInterpolateImageFunction ( )
protected
template<class TInputImage , class TCoordRep = double, class TPixelCompare = std::less<typename itk::NumericTraits<typename TInputImage::PixelType>::RealType>>
itk::LabelImageGaussianInterpolateImageFunction< TInputImage, TCoordRep, TPixelCompare >::~LabelImageGaussianInterpolateImageFunction ( )
inlineprotected

Definition at line 112 of file itkLabelImageGaussianInterpolateImageFunction.h.

template<class TInputImage , class TCoordRep = double, class TPixelCompare = std::less<typename itk::NumericTraits<typename TInputImage::PixelType>::RealType>>
itk::LabelImageGaussianInterpolateImageFunction< TInputImage, TCoordRep, TPixelCompare >::LabelImageGaussianInterpolateImageFunction ( const Self &  )
private

Member Function Documentation

template<class TInputImage , class TCoordRep = double, class TPixelCompare = std::less<typename itk::NumericTraits<typename TInputImage::PixelType>::RealType>>
virtual::itk::LightObject::Pointer itk::LabelImageGaussianInterpolateImageFunction< TInputImage, TCoordRep, TPixelCompare >::CreateAnother ( void  ) const
virtual

Create an object from an instance, potentially deferring to a factory. This method allows you to create an instance of an object that is exactly the same type as the referring object. This is useful in cases where an object has been cast back to a base class.

Reimplemented from itk::GaussianInterpolateImageFunction< TInputImage, TCoordRep >.

template<class TInputImage , class TCoordRep = double, class TPixelCompare = std::less<typename itk::NumericTraits<typename TInputImage::PixelType>::RealType>>
virtual OutputType itk::LabelImageGaussianInterpolateImageFunction< TInputImage, TCoordRep, TPixelCompare >::EvaluateAtContinuousIndex ( const ContinuousIndexType &  cindex) const
inlinevirtual

Evaluate at the given index

Reimplemented from itk::GaussianInterpolateImageFunction< TInputImage, TCoordRep >.

Definition at line 104 of file itkLabelImageGaussianInterpolateImageFunction.h.

References NULL.

template<class TInputImage , class TCoordRep = double, class TPixelCompare = std::less<typename itk::NumericTraits<typename TInputImage::PixelType>::RealType>>
virtual OutputType itk::LabelImageGaussianInterpolateImageFunction< TInputImage, TCoordRep, TPixelCompare >::EvaluateAtContinuousIndex ( const ContinuousIndexType &  ,
OutputType *   
) const
privatevirtual

Evaluate function value at the given index

Reimplemented from itk::GaussianInterpolateImageFunction< TInputImage, TCoordRep >.

template<class TInputImage , class TCoordRep = double, class TPixelCompare = std::less<typename itk::NumericTraits<typename TInputImage::PixelType>::RealType>>
virtual const char* itk::LabelImageGaussianInterpolateImageFunction< TInputImage, TCoordRep, TPixelCompare >::GetNameOfClass ( ) const
virtual

Run-time type information (and related methods).

Reimplemented from itk::GaussianInterpolateImageFunction< TInputImage, TCoordRep >.

template<class TInputImage , class TCoordRep = double, class TPixelCompare = std::less<typename itk::NumericTraits<typename TInputImage::PixelType>::RealType>>
static Pointer itk::LabelImageGaussianInterpolateImageFunction< TInputImage, TCoordRep, TPixelCompare >::New ( )
static

Method for creation through the object factory.

template<class TInputImage , class TCoordRep = double, class TPixelCompare = std::less<typename itk::NumericTraits<typename TInputImage::PixelType>::RealType>>
void itk::LabelImageGaussianInterpolateImageFunction< TInputImage, TCoordRep, TPixelCompare >::operator= ( const Self &  )
private

Member Data Documentation

template<class TInputImage , class TCoordRep = double, class TPixelCompare = std::less<typename itk::NumericTraits<typename TInputImage::PixelType>::RealType>>
const unsigned int itk::LabelImageGaussianInterpolateImageFunction< TInputImage, TCoordRep, TPixelCompare >::ImageDimension = TInputImage::ImageDimension
static

ImageDimension constant

Definition at line 81 of file itkLabelImageGaussianInterpolateImageFunction.h.

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