ITK  4.4.0
Insight Segmentation and Registration Toolkit
Public Types | Public Member Functions | Static Public Member Functions | Static Public Attributes | Protected Member Functions | Private Member Functions | Private Attributes | List of all members
itk::MorphologicalWatershedFromMarkersImageFilter< TInputImage, TLabelImage > Class Template Reference

#include <itkMorphologicalWatershedFromMarkersImageFilter.h>

+ Inheritance diagram for itk::MorphologicalWatershedFromMarkersImageFilter< TInputImage, TLabelImage >:
+ Collaboration diagram for itk::MorphologicalWatershedFromMarkersImageFilter< TInputImage, TLabelImage >:

Detailed Description

template<class TInputImage, class TLabelImage>
class itk::MorphologicalWatershedFromMarkersImageFilter< TInputImage, TLabelImage >

Morphological watershed transform from markers.

The watershed transform is a tool for image segmentation that is fast and flexible and potentially fairly parameter free. It was originally derived from a geophysical model of rain falling on a terrain and a variety of more formal definitions have been devised to allow development of practical algorithms. If an image is considered as a terrain and divided into catchment basins then the hope is that each catchment basin would contain an object of interest.

The output is a label image. A label image, sometimes referred to as a categorical image, has unique values for each region. For example, if a watershed produces 2 regions, all pixels belonging to one region would have value A, and all belonging to the other might have value B. Unassigned pixels, such as watershed lines, might have the background value (0 by convention).

The simplest way of using the watershed is to preprocess the image we want to segment so that the boundaries of our objects are bright (e.g apply an edge detector) and compute the watershed transform of the edge image. Watershed lines will correspond to the boundaries and our problem will be solved. This is rarely useful in practice because there are always more regional minima than there are objects, either due to noise or natural variations in the object surfaces. Therefore, while many watershed lines do lie on significant boundaries, there are many that don't. Various methods can be used to reduce the number of minima in the image, like thresholding the smallest values, filtering the minima and/or smoothing the image.

This filter use another approach to avoid the problem of over segmentation: it let the user provide a marker image which mark the minima in the input image and give them a label. The minima are imposed in the input image by the markers. The labels of the output image are the label of the marker image.

The morphological watershed transform algorithm is described in Chapter 9.2 of Pierre Soille's book "Morphological Image Analysis: Principles and Applications", Second Edition, Springer, 2003.

This code was contributed in the Insight Journal paper: "The watershed transform in ITK - discussion and new developments" by Beare R., Lehmann G. http://hdl.handle.net/1926/202 http://www.insight-journal.org/browse/publication/92

Author
Gaetan Lehmann. Biologie du Developpement et de la Reproduction, INRA de Jouy-en-Josas, France.
Richard Beare. Department of Medicine, Monash University, Melbourne, Australia.
See Also
WatershedImageFilter, MorphologicalWatershedImageFilter

Definition at line 80 of file itkMorphologicalWatershedFromMarkersImageFilter.h.

Public Types

typedef SmartPointer< const SelfConstPointer
 
typedef LabelImageType::IndexType IndexType
 
typedef
InputImageType::ConstPointer 
InputImageConstPointer
 
typedef InputImageType::PixelType InputImagePixelType
 
typedef InputImageType::Pointer InputImagePointer
 
typedef InputImageType::RegionType InputImageRegionType
 
typedef TInputImage InputImageType
 
typedef
LabelImageType::ConstPointer 
LabelImageConstPointer
 
typedef LabelImageType::PixelType LabelImagePixelType
 
typedef LabelImageType::Pointer LabelImagePointer
 
typedef LabelImageType::RegionType LabelImageRegionType
 
typedef TLabelImage LabelImageType
 
typedef SmartPointer< SelfPointer
 
typedef
MorphologicalWatershedFromMarkersImageFilter 
Self
 
typedef ImageToImageFilter
< TInputImage, TLabelImage > 
Superclass
 
- Public Types inherited from itk::ImageToImageFilter< TInputImage, TLabelImage >
typedef SmartPointer< const SelfConstPointer
 
typedef
InputImageType::ConstPointer 
InputImageConstPointer
 
typedef InputImageType::PixelType InputImagePixelType
 
typedef InputImageType::Pointer InputImagePointer
 
typedef InputImageType::RegionType InputImageRegionType
 
typedef TInputImage InputImageType
 
typedef
Superclass::OutputImagePixelType 
OutputImagePixelType
 
typedef
Superclass::OutputImageRegionType 
OutputImageRegionType
 
typedef SmartPointer< SelfPointer
 
typedef ImageToImageFilter Self
 
typedef ImageSource< TLabelImage > Superclass
 
- Public Types inherited from itk::ImageSource< TLabelImage >
typedef SmartPointer< const SelfConstPointer
 
typedef
Superclass::DataObjectIdentifierType 
DataObjectIdentifierType
 
typedef DataObject::Pointer DataObjectPointer
 
typedef
Superclass::DataObjectPointerArraySizeType 
DataObjectPointerArraySizeType
 
typedef OutputImageType::PixelType OutputImagePixelType
 
typedef OutputImageType::Pointer OutputImagePointer
 
typedef OutputImageType::RegionType OutputImageRegionType
 
typedef TLabelImage OutputImageType
 
typedef SmartPointer< SelfPointer
 
typedef ImageSource Self
 
typedef ProcessObject Superclass
 
- Public Types inherited from itk::ProcessObject
typedef SmartPointer< const SelfConstPointer
 
typedef
DataObject::DataObjectIdentifierType 
DataObjectIdentifierType
 
typedef DataObject::Pointer DataObjectPointer
 
typedef std::vector
< DataObjectPointer
DataObjectPointerArray
 
typedef
DataObjectPointerArray::size_type 
DataObjectPointerArraySizeType
 
typedef std::vector
< DataObjectIdentifierType
NameArray
 
typedef SmartPointer< SelfPointer
 
typedef ProcessObject Self
 
typedef Object Superclass
 
- Public Types inherited from itk::Object
typedef SmartPointer< const SelfConstPointer
 
typedef SmartPointer< SelfPointer
 
typedef Object Self
 
typedef LightObject Superclass
 
- Public Types inherited from itk::LightObject
typedef SmartPointer< const SelfConstPointer
 
typedef SmartPointer< SelfPointer
 
typedef LightObject Self
 

Public Member Functions

virtual ::itk::LightObject::Pointer CreateAnother (void) const
 
const LabelImageTypeGetMarkerImage () const
 
virtual const char * GetNameOfClass () const
 
void SetInput1 (const TInputImage *input)
 
void SetInput2 (const TLabelImage *input)
 
void SetMarkerImage (const TLabelImage *input)
 
virtual void SetFullyConnected (bool _arg)
 
virtual const bool & GetFullyConnected ()
 
virtual void FullyConnectedOn ()
 
virtual void FullyConnectedOff ()
 
virtual void SetMarkWatershedLine (bool _arg)
 
virtual const bool & GetMarkWatershedLine ()
 
virtual void MarkWatershedLineOn ()
 
virtual void MarkWatershedLineOff ()
 
- Public Member Functions inherited from itk::ImageToImageFilter< TInputImage, TLabelImage >
const InputImageTypeGetInput (void) const
 
const InputImageTypeGetInput (unsigned int idx) const
 
virtual void PopBackInput ()
 
virtual void PopFrontInput ()
 
virtual void PushBackInput (const InputImageType *image)
 
virtual void PushFrontInput (const InputImageType *image)
 
virtual void SetInput (const InputImageType *image)
 
virtual void SetInput (unsigned int, const TInputImage *image)
 
virtual void SetCoordinateTolerance (double _arg)
 
virtual double GetCoordinateTolerance () const
 
virtual void SetDirectionTolerance (double _arg)
 
virtual double GetDirectionTolerance () const
 
- Public Member Functions inherited from itk::ImageSource< TLabelImage >
OutputImageTypeGetOutput (unsigned int idx)
 
virtual void GraftNthOutput (unsigned int idx, DataObject *output)
 
virtual void GraftOutput (DataObject *output)
 
virtual void GraftOutput (const DataObjectIdentifierType &key, DataObject *output)
 
OutputImageTypeGetOutput (void)
 
const OutputImageTypeGetOutput (void) const
 
virtual
ProcessObject::DataObjectPointer 
MakeOutput (ProcessObject::DataObjectPointerArraySizeType idx)
 
- Public Member Functions inherited from itk::ProcessObject
virtual void AbortGenerateDataOff ()
 
virtual void AbortGenerateDataOn ()
 
virtual const bool & GetAbortGenerateData ()
 
NameArray GetInputNames () const
 
MultiThreader * GetMultiThreader () const
 
DataObjectPointerArraySizeType GetNumberOfIndexedInputs () const
 
DataObjectPointerArraySizeType GetNumberOfInputs () const
 
DataObjectPointerArraySizeType GetNumberOfOutputs () const
 
virtual
DataObjectPointerArraySizeType 
GetNumberOfValidRequiredInputs () const
 
NameArray GetOutputNames () const
 
virtual const float & GetProgress ()
 
NameArray GetRequiredInputNames () const
 
bool HasInput (const DataObjectIdentifierType &key) const
 
bool HasOutput (const DataObjectIdentifierType &key) const
 
virtual DataObjectPointer MakeOutput (const DataObjectIdentifierType &)
 
virtual void PrepareOutputs ()
 
virtual void PropagateRequestedRegion (DataObject *output)
 
virtual void ResetPipeline ()
 
virtual void SetAbortGenerateData (bool _arg)
 
virtual void SetProgress (float _arg)
 
virtual void Update ()
 
virtual void UpdateLargestPossibleRegion ()
 
virtual void UpdateOutputData (DataObject *output)
 
virtual void UpdateOutputInformation ()
 
void UpdateProgress (float amount)
 
DataObjectPointerArray GetInputs ()
 
DataObjectPointerArray GetOutputs ()
 
DataObjectPointerArray GetIndexedInputs ()
 
DataObjectPointerArray GetIndexedOutputs ()
 
DataObjectPointerArraySizeType GetNumberOfIndexedOutputs () const
 
virtual void SetReleaseDataFlag (bool flag)
 
virtual bool GetReleaseDataFlag () const
 
void ReleaseDataFlagOn ()
 
void ReleaseDataFlagOff ()
 
virtual void SetReleaseDataBeforeUpdateFlag (bool _arg)
 
virtual const bool & GetReleaseDataBeforeUpdateFlag ()
 
virtual void ReleaseDataBeforeUpdateFlagOn ()
 
virtual void ReleaseDataBeforeUpdateFlagOff ()
 
virtual void SetNumberOfThreads (ThreadIdType _arg)
 
virtual const ThreadIdTypeGetNumberOfThreads ()
 
- Public Member Functions inherited from itk::Object
unsigned long AddObserver (const EventObject &event, Command *)
 
unsigned long AddObserver (const EventObject &event, Command *) const
 
virtual void DebugOff () const
 
virtual void DebugOn () const
 
CommandGetCommand (unsigned long tag)
 
bool GetDebug () const
 
MetaDataDictionaryGetMetaDataDictionary (void)
 
const MetaDataDictionaryGetMetaDataDictionary (void) const
 
virtual ModifiedTimeType GetMTime () const
 
virtual const TimeStampGetTimeStamp () const
 
bool HasObserver (const EventObject &event) const
 
void InvokeEvent (const EventObject &)
 
void InvokeEvent (const EventObject &) const
 
virtual void Modified () const
 
virtual void Register () const
 
void RemoveAllObservers ()
 
void RemoveObserver (unsigned long tag)
 
void SetDebug (bool debugFlag) const
 
void SetMetaDataDictionary (const MetaDataDictionary &rhs)
 
virtual void SetReferenceCount (int)
 
virtual void UnRegister () const
 
- Public Member Functions inherited from itk::LightObject
virtual void Delete ()
 
virtual int GetReferenceCount () const
 
 itkCloneMacro (Self)
 
void Print (std::ostream &os, Indent indent=0) const
 

Static Public Member Functions

static Pointer New ()
 

Static Public Attributes

static const unsigned int ImageDimension = TInputImage::ImageDimension
 
- Static Public Attributes inherited from itk::ImageToImageFilter< TInputImage, TLabelImage >
static const unsigned int InputImageDimension
 
static const unsigned int OutputImageDimension
 
- Static Public Attributes inherited from itk::ImageSource< TLabelImage >
static const unsigned int OutputImageDimension
 

Protected Member Functions

void EnlargeOutputRequestedRegion (DataObject *)
 
void GenerateData ()
 
void GenerateInputRequestedRegion ()
 
 MorphologicalWatershedFromMarkersImageFilter ()
 
void PrintSelf (std::ostream &os, Indent indent) const
 
 ~MorphologicalWatershedFromMarkersImageFilter ()
 
- Protected Member Functions inherited from itk::ImageToImageFilter< TInputImage, TLabelImage >
virtual void CallCopyInputRegionToOutputRegion (OutputImageRegionType &destRegion, const InputImageRegionType &srcRegion)
 
virtual void CallCopyOutputRegionToInputRegion (InputImageRegionType &destRegion, const OutputImageRegionType &srcRegion)
 
 ImageToImageFilter ()
 
virtual void VerifyInputInformation ()
 
 ~ImageToImageFilter ()
 
void PushBackInput (const DataObject *input)
 
void PushFrontInput (const DataObject *input)
 
- Protected Member Functions inherited from itk::ImageSource< TLabelImage >
virtual void AfterThreadedGenerateData ()
 
virtual void AllocateOutputs ()
 
virtual void BeforeThreadedGenerateData ()
 
virtual const
ImageRegionSplitterBase
GetImageRegionSplitter (void) const
 
 ImageSource ()
 
virtual unsigned int SplitRequestedRegion (unsigned int i, unsigned int num, OutputImageRegionType &splitRegion)
 
virtual void ThreadedGenerateData (const OutputImageRegionType &outputRegionForThread, ThreadIdType threadId)
 
virtual ~ImageSource ()
 
- Protected Member Functions inherited from itk::ProcessObject
virtual void AddInput (DataObject *input)
 
virtual void AddOutput (DataObject *output)
 
virtual void CacheInputReleaseDataFlags ()
 
virtual void GenerateOutputInformation ()
 
virtual void GenerateOutputRequestedRegion (DataObject *output)
 
virtual const
DataObjectPointerArraySizeType
GetNumberOfRequiredOutputs ()
 
bool IsIndexedInputName (const DataObjectIdentifierType &) const
 
bool IsIndexedOutputName (const DataObjectIdentifierType &) const
 
 itkLegacyMacro (virtual void RemoveOutput(DataObject *output))
 
 itkLegacyMacro (void SetNumberOfOutputs(DataObjectPointerArraySizeType num))
 
 itkLegacyMacro (virtual void RemoveInput(DataObject *input))
 
 itkLegacyMacro (void SetNumberOfInputs(DataObjectPointerArraySizeType num))
 
DataObjectPointerArraySizeType MakeIndexFromInputName (const DataObjectIdentifierType &name) const
 
DataObjectPointerArraySizeType MakeIndexFromOutputName (const DataObjectIdentifierType &name) const
 
DataObjectIdentifierType MakeNameFromInputIndex (DataObjectPointerArraySizeType idx) const
 
DataObjectIdentifierType MakeNameFromOutputIndex (DataObjectPointerArraySizeType idx) const
 
 ProcessObject ()
 
virtual void PropagateResetPipeline ()
 
virtual void ReleaseInputs ()
 
virtual void RemoveInput (const DataObjectIdentifierType &key)
 
virtual void RemoveInput (DataObjectPointerArraySizeType)
 
virtual void RemoveOutput (const DataObjectIdentifierType &key)
 
virtual void RemoveOutput (DataObjectPointerArraySizeType idx)
 
virtual void RestoreInputReleaseDataFlags ()
 
virtual void SetInput (const DataObjectIdentifierType &key, DataObject *input)
 
virtual void SetNthInput (DataObjectPointerArraySizeType num, DataObject *input)
 
virtual void SetNthOutput (DataObjectPointerArraySizeType num, DataObject *output)
 
void SetNumberOfIndexedInputs (DataObjectPointerArraySizeType num)
 
void SetNumberOfIndexedOutputs (DataObjectPointerArraySizeType num)
 
virtual void SetNumberOfRequiredOutputs (DataObjectPointerArraySizeType _arg)
 
virtual void SetOutput (const DataObjectIdentifierType &key, DataObject *output)
 
virtual void SetPrimaryInput (DataObject *input)
 
virtual void SetPrimaryOutput (DataObject *output)
 
virtual void VerifyPreconditions ()
 
 ~ProcessObject ()
 
DataObjectGetInput (const DataObjectIdentifierType &key)
 
const DataObjectGetInput (const DataObjectIdentifierType &key) const
 
DataObjectGetInput (DataObjectPointerArraySizeType idx)
 
const DataObjectGetInput (DataObjectPointerArraySizeType idx) const
 
DataObjectGetPrimaryInput ()
 
const DataObjectGetPrimaryInput () const
 
virtual void SetPrimaryInputName (const DataObjectIdentifierType &key)
 
virtual const char * GetPrimaryInputName (void) const
 
virtual void SetNumberOfRequiredInputs (DataObjectPointerArraySizeType)
 
virtual const
DataObjectPointerArraySizeType
GetNumberOfRequiredInputs ()
 
bool AddRequiredInputName (const DataObjectIdentifierType &)
 
bool AddRequiredInputName (const DataObjectIdentifierType &, DataObjectPointerArraySizeType idx)
 
bool RemoveRequiredInputName (const DataObjectIdentifierType &)
 
bool IsRequiredInputName (const DataObjectIdentifierType &) const
 
void SetRequiredInputNames (const NameArray &)
 
DataObjectGetOutput (const DataObjectIdentifierType &key)
 
const DataObjectGetOutput (const DataObjectIdentifierType &key) const
 
virtual void SetPrimaryOutputName (const DataObjectIdentifierType &key)
 
virtual const char * GetPrimaryOutputName (void) const
 
DataObjectGetOutput (DataObjectPointerArraySizeType idx)
 
const DataObjectGetOutput (DataObjectPointerArraySizeType idx) const
 
DataObjectGetPrimaryOutput ()
 
const DataObjectGetPrimaryOutput () const
 
- Protected Member Functions inherited from itk::Object
 Object ()
 
bool PrintObservers (std::ostream &os, Indent indent) const
 
virtual void SetTimeStamp (const TimeStamp &time)
 
virtual ~Object ()
 
- Protected Member Functions inherited from itk::LightObject
virtual LightObject::Pointer InternalClone () const
 
 LightObject ()
 
virtual void PrintHeader (std::ostream &os, Indent indent) const
 
virtual void PrintTrailer (std::ostream &os, Indent indent) const
 
virtual ~LightObject ()
 

Private Member Functions

 MorphologicalWatershedFromMarkersImageFilter (const Self &)
 
void operator= (const Self &)
 

Private Attributes

bool m_FullyConnected
 
bool m_MarkWatershedLine
 

Additional Inherited Members

- Protected Types inherited from itk::ImageToImageFilter< TInputImage, TLabelImage >
typedef
ImageToImageFilterDetail::ImageRegionCopier
< itkGetStaticConstMacro(OutputImageDimension),
itkGetStaticConstMacro(InputImageDimension) > 
InputToOutputRegionCopierType
 
typedef
ImageToImageFilterDetail::ImageRegionCopier
< itkGetStaticConstMacro(InputImageDimension),
itkGetStaticConstMacro(OutputImageDimension) > 
OutputToInputRegionCopierType
 
- Static Protected Member Functions inherited from itk::ImageSource< TLabelImage >
static const
ImageRegionSplitterBase
GetGlobalDefaultSplitter ()
 
static ITK_THREAD_RETURN_TYPE ThreaderCallback (void *arg)
 
- Protected Attributes inherited from itk::ProcessObject
TimeStamp m_OutputInformationMTime
 
bool m_Updating
 

Member Typedef Documentation

template<class TInputImage , class TLabelImage >
typedef SmartPointer< const Self > itk::MorphologicalWatershedFromMarkersImageFilter< TInputImage, TLabelImage >::ConstPointer
template<class TInputImage , class TLabelImage >
typedef LabelImageType::IndexType itk::MorphologicalWatershedFromMarkersImageFilter< TInputImage, TLabelImage >::IndexType
template<class TInputImage , class TLabelImage >
typedef InputImageType::ConstPointer itk::MorphologicalWatershedFromMarkersImageFilter< TInputImage, TLabelImage >::InputImageConstPointer
template<class TInputImage , class TLabelImage >
typedef InputImageType::PixelType itk::MorphologicalWatershedFromMarkersImageFilter< TInputImage, TLabelImage >::InputImagePixelType
template<class TInputImage , class TLabelImage >
typedef InputImageType::Pointer itk::MorphologicalWatershedFromMarkersImageFilter< TInputImage, TLabelImage >::InputImagePointer
template<class TInputImage , class TLabelImage >
typedef InputImageType::RegionType itk::MorphologicalWatershedFromMarkersImageFilter< TInputImage, TLabelImage >::InputImageRegionType
template<class TInputImage , class TLabelImage >
typedef TInputImage itk::MorphologicalWatershedFromMarkersImageFilter< TInputImage, TLabelImage >::InputImageType

Some convenient typedefs.

Definition at line 91 of file itkMorphologicalWatershedFromMarkersImageFilter.h.

template<class TInputImage , class TLabelImage >
typedef LabelImageType::ConstPointer itk::MorphologicalWatershedFromMarkersImageFilter< TInputImage, TLabelImage >::LabelImageConstPointer
template<class TInputImage , class TLabelImage >
typedef LabelImageType::PixelType itk::MorphologicalWatershedFromMarkersImageFilter< TInputImage, TLabelImage >::LabelImagePixelType
template<class TInputImage , class TLabelImage >
typedef LabelImageType::Pointer itk::MorphologicalWatershedFromMarkersImageFilter< TInputImage, TLabelImage >::LabelImagePointer
template<class TInputImage , class TLabelImage >
typedef LabelImageType::RegionType itk::MorphologicalWatershedFromMarkersImageFilter< TInputImage, TLabelImage >::LabelImageRegionType
template<class TInputImage , class TLabelImage >
typedef TLabelImage itk::MorphologicalWatershedFromMarkersImageFilter< TInputImage, TLabelImage >::LabelImageType
template<class TInputImage , class TLabelImage >
typedef SmartPointer< Self > itk::MorphologicalWatershedFromMarkersImageFilter< TInputImage, TLabelImage >::Pointer
template<class TInputImage , class TLabelImage >
typedef MorphologicalWatershedFromMarkersImageFilter itk::MorphologicalWatershedFromMarkersImageFilter< TInputImage, TLabelImage >::Self

Standard class typedefs.

Definition at line 85 of file itkMorphologicalWatershedFromMarkersImageFilter.h.

template<class TInputImage , class TLabelImage >
typedef ImageToImageFilter< TInputImage, TLabelImage > itk::MorphologicalWatershedFromMarkersImageFilter< TInputImage, TLabelImage >::Superclass

Constructor & Destructor Documentation

template<class TInputImage , class TLabelImage >
itk::MorphologicalWatershedFromMarkersImageFilter< TInputImage, TLabelImage >::MorphologicalWatershedFromMarkersImageFilter ( )
protected
template<class TInputImage , class TLabelImage >
itk::MorphologicalWatershedFromMarkersImageFilter< TInputImage, TLabelImage >::~MorphologicalWatershedFromMarkersImageFilter ( )
inlineprotected
template<class TInputImage , class TLabelImage >
itk::MorphologicalWatershedFromMarkersImageFilter< TInputImage, TLabelImage >::MorphologicalWatershedFromMarkersImageFilter ( const Self )
private

Member Function Documentation

template<class TInputImage , class TLabelImage >
virtual::itk::LightObject::Pointer itk::MorphologicalWatershedFromMarkersImageFilter< TInputImage, TLabelImage >::CreateAnother ( void  ) const
virtual

Create an object from an instance, potentially deferring to a factory. This method allows you to create an instance of an object that is exactly the same type as the referring object. This is useful in cases where an object has been cast back to a base class.

Reimplemented from itk::Object.

template<class TInputImage , class TLabelImage >
void itk::MorphologicalWatershedFromMarkersImageFilter< TInputImage, TLabelImage >::EnlargeOutputRequestedRegion ( DataObject )
protectedvirtual

This filter will enlarge the output requested region to produce all of the output.

See Also
ProcessObject::EnlargeOutputRequestedRegion()

Reimplemented from itk::ProcessObject.

template<class TInputImage , class TLabelImage >
virtual void itk::MorphologicalWatershedFromMarkersImageFilter< TInputImage, TLabelImage >::FullyConnectedOff ( )
virtual

Set/Get whether the connected components are defined strictly by face connectivity or by face+edge+vertex connectivity. Default is FullyConnectedOff. For objects that are 1 pixel wide, use FullyConnectedOn.

template<class TInputImage , class TLabelImage >
virtual void itk::MorphologicalWatershedFromMarkersImageFilter< TInputImage, TLabelImage >::FullyConnectedOn ( )
virtual

Set/Get whether the connected components are defined strictly by face connectivity or by face+edge+vertex connectivity. Default is FullyConnectedOff. For objects that are 1 pixel wide, use FullyConnectedOn.

template<class TInputImage , class TLabelImage >
void itk::MorphologicalWatershedFromMarkersImageFilter< TInputImage, TLabelImage >::GenerateData ( )
protectedvirtual

The filter is single threaded.

Reimplemented from itk::ImageSource< TLabelImage >.

template<class TInputImage , class TLabelImage >
void itk::MorphologicalWatershedFromMarkersImageFilter< TInputImage, TLabelImage >::GenerateInputRequestedRegion ( )
protectedvirtual

MorphologicalWatershedFromMarkersImageFilter needs to request the entire input images.

Reimplemented from itk::ImageToImageFilter< TInputImage, TLabelImage >.

template<class TInputImage , class TLabelImage >
virtual const bool& itk::MorphologicalWatershedFromMarkersImageFilter< TInputImage, TLabelImage >::GetFullyConnected ( )
virtual

Set/Get whether the connected components are defined strictly by face connectivity or by face+edge+vertex connectivity. Default is FullyConnectedOff. For objects that are 1 pixel wide, use FullyConnectedOn.

template<class TInputImage , class TLabelImage >
const LabelImageType* itk::MorphologicalWatershedFromMarkersImageFilter< TInputImage, TLabelImage >::GetMarkerImage ( ) const
inline

Get the marker image

Definition at line 123 of file itkMorphologicalWatershedFromMarkersImageFilter.h.

References itk::ProcessObject::GetInput().

template<class TInputImage , class TLabelImage >
virtual const bool& itk::MorphologicalWatershedFromMarkersImageFilter< TInputImage, TLabelImage >::GetMarkWatershedLine ( )
virtual

Set/Get whether the watershed pixel must be marked or not. Default is true. Set it to false do not only avoid writing watershed pixels, it also decrease algorithm complexity.

template<class TInputImage , class TLabelImage >
virtual const char* itk::MorphologicalWatershedFromMarkersImageFilter< TInputImage, TLabelImage >::GetNameOfClass ( ) const
virtual

Runtime information support.

Reimplemented from itk::ImageToImageFilter< TInputImage, TLabelImage >.

template<class TInputImage , class TLabelImage >
virtual void itk::MorphologicalWatershedFromMarkersImageFilter< TInputImage, TLabelImage >::MarkWatershedLineOff ( )
virtual

Set/Get whether the watershed pixel must be marked or not. Default is true. Set it to false do not only avoid writing watershed pixels, it also decrease algorithm complexity.

template<class TInputImage , class TLabelImage >
virtual void itk::MorphologicalWatershedFromMarkersImageFilter< TInputImage, TLabelImage >::MarkWatershedLineOn ( )
virtual

Set/Get whether the watershed pixel must be marked or not. Default is true. Set it to false do not only avoid writing watershed pixels, it also decrease algorithm complexity.

template<class TInputImage , class TLabelImage >
static Pointer itk::MorphologicalWatershedFromMarkersImageFilter< TInputImage, TLabelImage >::New ( )
static

Standard New method.

template<class TInputImage , class TLabelImage >
void itk::MorphologicalWatershedFromMarkersImageFilter< TInputImage, TLabelImage >::operator= ( const Self )
private
template<class TInputImage , class TLabelImage >
void itk::MorphologicalWatershedFromMarkersImageFilter< TInputImage, TLabelImage >::PrintSelf ( std::ostream &  os,
Indent  indent 
) const
protectedvirtual

Methods invoked by Print() to print information about the object including superclasses. Typically not called by the user (use Print() instead) but used in the hierarchical print process to combine the output of several classes.

Reimplemented from itk::ImageToImageFilter< TInputImage, TLabelImage >.

template<class TInputImage , class TLabelImage >
virtual void itk::MorphologicalWatershedFromMarkersImageFilter< TInputImage, TLabelImage >::SetFullyConnected ( bool  _arg)
virtual

Set/Get whether the connected components are defined strictly by face connectivity or by face+edge+vertex connectivity. Default is FullyConnectedOff. For objects that are 1 pixel wide, use FullyConnectedOn.

template<class TInputImage , class TLabelImage >
void itk::MorphologicalWatershedFromMarkersImageFilter< TInputImage, TLabelImage >::SetInput1 ( const TInputImage *  input)
inline

Set the input image

Definition at line 130 of file itkMorphologicalWatershedFromMarkersImageFilter.h.

template<class TInputImage , class TLabelImage >
void itk::MorphologicalWatershedFromMarkersImageFilter< TInputImage, TLabelImage >::SetInput2 ( const TLabelImage *  input)
inline

Set the marker image

Definition at line 136 of file itkMorphologicalWatershedFromMarkersImageFilter.h.

template<class TInputImage , class TLabelImage >
void itk::MorphologicalWatershedFromMarkersImageFilter< TInputImage, TLabelImage >::SetMarkerImage ( const TLabelImage *  input)
inline

Set the marker image

Definition at line 116 of file itkMorphologicalWatershedFromMarkersImageFilter.h.

template<class TInputImage , class TLabelImage >
virtual void itk::MorphologicalWatershedFromMarkersImageFilter< TInputImage, TLabelImage >::SetMarkWatershedLine ( bool  _arg)
virtual

Set/Get whether the watershed pixel must be marked or not. Default is true. Set it to false do not only avoid writing watershed pixels, it also decrease algorithm complexity.

Member Data Documentation

template<class TInputImage , class TLabelImage >
const unsigned int itk::MorphologicalWatershedFromMarkersImageFilter< TInputImage, TLabelImage >::ImageDimension = TInputImage::ImageDimension
static

ImageDimension constants

Definition at line 106 of file itkMorphologicalWatershedFromMarkersImageFilter.h.

template<class TInputImage , class TLabelImage >
bool itk::MorphologicalWatershedFromMarkersImageFilter< TInputImage, TLabelImage >::m_FullyConnected
private
template<class TInputImage , class TLabelImage >
bool itk::MorphologicalWatershedFromMarkersImageFilter< TInputImage, TLabelImage >::m_MarkWatershedLine
private

The documentation for this class was generated from the following file: