itk::RegionBasedLevelSetFunctionData< TInputImage, TFeatureImage > Class Template Reference

#include <itkRegionBasedLevelSetFunctionData.h>

Inheritance diagram for itk::RegionBasedLevelSetFunctionData< TInputImage, TFeatureImage >:

Collaboration diagram for itk::RegionBasedLevelSetFunctionData< TInputImage, TFeatureImage >:

Detailed Description

template<class TInputImage, class TFeatureImage>
class itk::RegionBasedLevelSetFunctionData< TInputImage, TFeatureImage >

Helper class used to share data in the ScalarChanAndVeseLevelSetFunction.

This class holds cache data used during the computation of the LevelSet updates.

Based on the paper:

   "An active contour model without edges"
    T. Chan and L. Vese.
    In Scale-Space Theories in Computer Vision, pages 141-151, 1999.

Author

Mosaliganti K., Smith B., Gelas A., Gouaillard A., Megason S.

This code was taken from the Insight Journal paper:

"Cell Tracking using Coupled Active Surfaces for Nuclei and Membranes"
http://www.insight-journal.org/browse/publication/642
http://hdl.handle.net/10380/3055

That is based on the papers:

"Level Set Segmentation: Active Contours without edge"
http://www.insight-journal.org/browse/publication/322
http://hdl.handle.net/1926/1532

and

"Level set segmentation using coupled active surfaces"
http://www.insight-journal.org/browse/publication/323
http://hdl.handle.net/1926/1533

Definition at line 68 of file itkRegionBasedLevelSetFunctionData.h.

Public Types
typedef SmartPointer< const Self >	ConstPointer
typedef FeatureImageType::ConstPointer	FeatureImageConstPointer
typedef FeatureImageType::Pointer	FeatureImagePointer
typedef TFeatureImage	FeatureImageType
typedef FeatureImageType::IndexType	FeatureIndexType
typedef FeatureImageType::PixelType	FeaturePixelType
typedef FeatureImageType::PointType	FeaturePointType
typedef FeatureImageType::RegionType	FeatureRegionType
typedef FeatureImageType::SizeType	FeatureSizeType
typedef FeatureSizeType::SizeValueType	FeatureSizeValueType
typedef FeatureImageType::SpacingType	FeatureSpacingType
typedef InputImageType::ConstPointer	InputImageConstPointer
typedef InputImageType::Pointer	InputImagePointer
typedef TInputImage	InputImageType
typedef InputImageType::IndexType	InputIndexType
typedef InputIndexType::IndexValueType	InputIndexValueType
typedef InputImageType::PixelType	InputPixelType
typedef InputImageType::PointType	InputPointType
typedef InputImageType::RegionType	InputRegionType
typedef InputImageType::SizeType	InputSizeType
typedef InputSizeType::SizeValueType	InputSizeValueType
typedef InputImageType::SpacingType	InputSpacingType
typedef SmartPointer< Self >	Pointer
typedef RegionBasedLevelSetFunctionData	Self
typedef LightObject	Superclass
Public Types inherited from itk::LightObject
typedef SmartPointer< const Self >	ConstPointer
typedef SmartPointer< Self >	Pointer
typedef LightObject	Self

Public Member Functions
virtual ::itk::LightObject::Pointer	CreateAnother (void) const
void	CreateHeavisideFunctionOfLevelSetImage (const InputImageType *image)
FeatureIndexType	GetFeatureIndex (const InputIndexType &inputIndex)
InputIndexType	GetIndex (const FeatureIndexType &featureIndex)
virtual const char *	GetNameOfClass () const
template<class TIndex >
bool	VerifyInsideRegion (const TIndex &featureIndex)
Public Member Functions inherited from itk::LightObject
virtual void	Delete ()
virtual int	GetReferenceCount () const
	itkCloneMacro (Self)
void	Print (std::ostream &os, Indent indent=0) const
virtual void	Register () const
virtual void	SetReferenceCount (int)
virtual void	UnRegister () const

Static Public Member Functions
static Pointer	New ()
Static Public Member Functions inherited from itk::LightObject
static void	BreakOnError ()
static Pointer	New ()

Public Attributes
InputIndexType	m_End
InputImagePointer	m_HeavisideFunctionOfLevelSetImage
InputIndexType	m_Start
double	m_WeightedNumberOfPixelsInsideLevelSet
double	m_WeightedNumberOfPixelsOutsideLevelSet

Static Public Attributes
static const unsigned int	ImageDimension = TFeatureImage::ImageDimension

Protected Member Functions
	RegionBasedLevelSetFunctionData ()
virtual	~RegionBasedLevelSetFunctionData ()
Protected Member Functions inherited from itk::LightObject
virtual LightObject::Pointer	InternalClone () const
	LightObject ()
virtual void	PrintHeader (std::ostream &os, Indent indent) const
virtual void	PrintSelf (std::ostream &os, Indent indent) const
virtual void	PrintTrailer (std::ostream &os, Indent indent) const
virtual	~LightObject ()

Private Member Functions
void	operator= (const Self &)
	RegionBasedLevelSetFunctionData (const Self &)

Additional Inherited Members
Protected Types inherited from itk::LightObject
typedef int	InternalReferenceCountType
Protected Attributes inherited from itk::LightObject
InternalReferenceCountType	m_ReferenceCount
SimpleFastMutexLock	m_ReferenceCountLock

Member Typedef Documentation

template<class TInputImage , class TFeatureImage >

typedef SmartPointer< const Self > itk::RegionBasedLevelSetFunctionData< TInputImage, TFeatureImage >::ConstPointer

Definition at line 75 of file itkRegionBasedLevelSetFunctionData.h.

template<class TInputImage , class TFeatureImage >

typedef FeatureImageType::ConstPointer itk::RegionBasedLevelSetFunctionData< TInputImage, TFeatureImage >::FeatureImageConstPointer

Definition at line 98 of file itkRegionBasedLevelSetFunctionData.h.

template<class TInputImage , class TFeatureImage >

typedef FeatureImageType::Pointer itk::RegionBasedLevelSetFunctionData< TInputImage, TFeatureImage >::FeatureImagePointer

Definition at line 97 of file itkRegionBasedLevelSetFunctionData.h.

template<class TInputImage , class TFeatureImage >

typedef TFeatureImage itk::RegionBasedLevelSetFunctionData< TInputImage, TFeatureImage >::FeatureImageType

Definition at line 96 of file itkRegionBasedLevelSetFunctionData.h.

template<class TInputImage , class TFeatureImage >

typedef FeatureImageType::IndexType itk::RegionBasedLevelSetFunctionData< TInputImage, TFeatureImage >::FeatureIndexType

Definition at line 104 of file itkRegionBasedLevelSetFunctionData.h.

template<class TInputImage , class TFeatureImage >

typedef FeatureImageType::PixelType itk::RegionBasedLevelSetFunctionData< TInputImage, TFeatureImage >::FeaturePixelType

Definition at line 99 of file itkRegionBasedLevelSetFunctionData.h.

template<class TInputImage , class TFeatureImage >

typedef FeatureImageType::PointType itk::RegionBasedLevelSetFunctionData< TInputImage, TFeatureImage >::FeaturePointType

Definition at line 105 of file itkRegionBasedLevelSetFunctionData.h.

template<class TInputImage , class TFeatureImage >

typedef FeatureImageType::RegionType itk::RegionBasedLevelSetFunctionData< TInputImage, TFeatureImage >::FeatureRegionType

Definition at line 100 of file itkRegionBasedLevelSetFunctionData.h.

template<class TInputImage , class TFeatureImage >

typedef FeatureImageType::SizeType itk::RegionBasedLevelSetFunctionData< TInputImage, TFeatureImage >::FeatureSizeType

Definition at line 101 of file itkRegionBasedLevelSetFunctionData.h.

template<class TInputImage , class TFeatureImage >

typedef FeatureSizeType::SizeValueType itk::RegionBasedLevelSetFunctionData< TInputImage, TFeatureImage >::FeatureSizeValueType

Definition at line 102 of file itkRegionBasedLevelSetFunctionData.h.

template<class TInputImage , class TFeatureImage >

typedef FeatureImageType::SpacingType itk::RegionBasedLevelSetFunctionData< TInputImage, TFeatureImage >::FeatureSpacingType

Definition at line 103 of file itkRegionBasedLevelSetFunctionData.h.

template<class TInputImage , class TFeatureImage >

typedef InputImageType::ConstPointer itk::RegionBasedLevelSetFunctionData< TInputImage, TFeatureImage >::InputImageConstPointer

Definition at line 86 of file itkRegionBasedLevelSetFunctionData.h.

template<class TInputImage , class TFeatureImage >

typedef InputImageType::Pointer itk::RegionBasedLevelSetFunctionData< TInputImage, TFeatureImage >::InputImagePointer

Definition at line 85 of file itkRegionBasedLevelSetFunctionData.h.

template<class TInputImage , class TFeatureImage >

typedef TInputImage itk::RegionBasedLevelSetFunctionData< TInputImage, TFeatureImage >::InputImageType

Definition at line 82 of file itkRegionBasedLevelSetFunctionData.h.

template<class TInputImage , class TFeatureImage >

typedef InputImageType::IndexType itk::RegionBasedLevelSetFunctionData< TInputImage, TFeatureImage >::InputIndexType

Definition at line 92 of file itkRegionBasedLevelSetFunctionData.h.

template<class TInputImage , class TFeatureImage >

typedef InputIndexType::IndexValueType itk::RegionBasedLevelSetFunctionData< TInputImage, TFeatureImage >::InputIndexValueType

Definition at line 93 of file itkRegionBasedLevelSetFunctionData.h.

template<class TInputImage , class TFeatureImage >

typedef InputImageType::PixelType itk::RegionBasedLevelSetFunctionData< TInputImage, TFeatureImage >::InputPixelType

Definition at line 87 of file itkRegionBasedLevelSetFunctionData.h.

template<class TInputImage , class TFeatureImage >

typedef InputImageType::PointType itk::RegionBasedLevelSetFunctionData< TInputImage, TFeatureImage >::InputPointType

Definition at line 94 of file itkRegionBasedLevelSetFunctionData.h.

template<class TInputImage , class TFeatureImage >

typedef InputImageType::RegionType itk::RegionBasedLevelSetFunctionData< TInputImage, TFeatureImage >::InputRegionType

Definition at line 88 of file itkRegionBasedLevelSetFunctionData.h.

template<class TInputImage , class TFeatureImage >

typedef InputImageType::SizeType itk::RegionBasedLevelSetFunctionData< TInputImage, TFeatureImage >::InputSizeType

Definition at line 89 of file itkRegionBasedLevelSetFunctionData.h.

template<class TInputImage , class TFeatureImage >

typedef InputSizeType::SizeValueType itk::RegionBasedLevelSetFunctionData< TInputImage, TFeatureImage >::InputSizeValueType

Definition at line 90 of file itkRegionBasedLevelSetFunctionData.h.

template<class TInputImage , class TFeatureImage >

typedef InputImageType::SpacingType itk::RegionBasedLevelSetFunctionData< TInputImage, TFeatureImage >::InputSpacingType

Definition at line 91 of file itkRegionBasedLevelSetFunctionData.h.

template<class TInputImage , class TFeatureImage >

typedef SmartPointer< Self > itk::RegionBasedLevelSetFunctionData< TInputImage, TFeatureImage >::Pointer

Definition at line 74 of file itkRegionBasedLevelSetFunctionData.h.

template<class TInputImage , class TFeatureImage >

typedef RegionBasedLevelSetFunctionData itk::RegionBasedLevelSetFunctionData< TInputImage, TFeatureImage >::Self

Definition at line 72 of file itkRegionBasedLevelSetFunctionData.h.

template<class TInputImage , class TFeatureImage >

typedef LightObject itk::RegionBasedLevelSetFunctionData< TInputImage, TFeatureImage >::Superclass

Definition at line 73 of file itkRegionBasedLevelSetFunctionData.h.

Constructor & Destructor Documentation

template<class TInputImage , class TFeatureImage >

itk::RegionBasedLevelSetFunctionData< TInputImage, TFeatureImage >::RegionBasedLevelSetFunctionData ( )

protected

template<class TInputImage , class TFeatureImage >

virtual itk::RegionBasedLevelSetFunctionData< TInputImage, TFeatureImage >::~RegionBasedLevelSetFunctionData ( )

inlineprotectedvirtual

Definition at line 142 of file itkRegionBasedLevelSetFunctionData.h.

template<class TInputImage , class TFeatureImage >

itk::RegionBasedLevelSetFunctionData< TInputImage, TFeatureImage >::RegionBasedLevelSetFunctionData ( const Self &  )

private

Member Function Documentation

template<class TInputImage , class TFeatureImage >

virtual::itk::LightObject::Pointer itk::RegionBasedLevelSetFunctionData< TInputImage, TFeatureImage >::CreateAnother ( void  ) const

virtual

Create an object from an instance, potentially deferring to a factory. This method allows you to create an instance of an object that is exactly the same type as the referring object. This is useful in cases where an object has been cast back to a base class.

Reimplemented from itk::LightObject.

Reimplemented in itk::ScalarChanAndVeseLevelSetFunctionData< TInputImage, TFeatureImage >.

template<class TInputImage , class TFeatureImage >

void itk::RegionBasedLevelSetFunctionData< TInputImage, TFeatureImage >::CreateHeavisideFunctionOfLevelSetImage

(

const InputImageType *

image

)

template<class TInputImage , class TFeatureImage >

FeatureIndexType itk::RegionBasedLevelSetFunctionData< TInputImage, TFeatureImage >::GetFeatureIndex

(

const InputIndexType &

inputIndex

)

template<class TInputImage , class TFeatureImage >

InputIndexType itk::RegionBasedLevelSetFunctionData< TInputImage, TFeatureImage >::GetIndex

(

const FeatureIndexType &

featureIndex

)

template<class TInputImage , class TFeatureImage >

virtual const char* itk::RegionBasedLevelSetFunctionData< TInputImage, TFeatureImage >::GetNameOfClass ( ) const

virtual

Return the name of this class as a string. Used by the object factory (implemented in New()) to instantiate objects of a named type. Also used for debugging and other output information.

Reimplemented from itk::LightObject.

Reimplemented in itk::ScalarChanAndVeseLevelSetFunctionData< TInputImage, TFeatureImage >.

template<class TInputImage , class TFeatureImage >

static Pointer itk::RegionBasedLevelSetFunctionData< TInputImage, TFeatureImage >::New ( )

static

Method for creation through the object factory.

template<class TInputImage , class TFeatureImage >

void itk::RegionBasedLevelSetFunctionData< TInputImage, TFeatureImage >::operator= ( const Self &  )

private

template<class TInputImage , class TFeatureImage >

template<class TIndex >

bool itk::RegionBasedLevelSetFunctionData< TInputImage, TFeatureImage >::VerifyInsideRegion ( const TIndex &  featureIndex )

inline

Definition at line 114 of file itkRegionBasedLevelSetFunctionData.h.

References itk::RegionBasedLevelSetFunctionData< TInputImage, TFeatureImage >::ImageDimension, itk::RegionBasedLevelSetFunctionData< TInputImage, TFeatureImage >::m_End, and itk::RegionBasedLevelSetFunctionData< TInputImage, TFeatureImage >::m_Start.

Member Data Documentation

template<class TInputImage , class TFeatureImage >

const unsigned int itk::RegionBasedLevelSetFunctionData< TInputImage, TFeatureImage >::ImageDimension = TFeatureImage::ImageDimension

static

Definition at line 77 of file itkRegionBasedLevelSetFunctionData.h.

Referenced by itk::RegionBasedLevelSetFunctionData< TInputImage, TFeatureImage >::VerifyInsideRegion().

template<class TInputImage , class TFeatureImage >

InputIndexType itk::RegionBasedLevelSetFunctionData< TInputImage, TFeatureImage >::m_End

Definition at line 138 of file itkRegionBasedLevelSetFunctionData.h.

Referenced by itk::RegionBasedLevelSetFunctionData< TInputImage, TFeatureImage >::VerifyInsideRegion().

template<class TInputImage , class TFeatureImage >

InputImagePointer itk::RegionBasedLevelSetFunctionData< TInputImage, TFeatureImage >::m_HeavisideFunctionOfLevelSetImage

Definition at line 136 of file itkRegionBasedLevelSetFunctionData.h.

template<class TInputImage , class TFeatureImage >

InputIndexType itk::RegionBasedLevelSetFunctionData< TInputImage, TFeatureImage >::m_Start

Definition at line 137 of file itkRegionBasedLevelSetFunctionData.h.

Referenced by itk::RegionBasedLevelSetFunctionData< TInputImage, TFeatureImage >::VerifyInsideRegion().

template<class TInputImage , class TFeatureImage >

double itk::RegionBasedLevelSetFunctionData< TInputImage, TFeatureImage >::m_WeightedNumberOfPixelsInsideLevelSet

Definition at line 133 of file itkRegionBasedLevelSetFunctionData.h.

template<class TInputImage , class TFeatureImage >

double itk::RegionBasedLevelSetFunctionData< TInputImage, TFeatureImage >::m_WeightedNumberOfPixelsOutsideLevelSet

Definition at line 134 of file itkRegionBasedLevelSetFunctionData.h.

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The documentation for this class was generated from the following file:

• itkRegionBasedLevelSetFunctionData.h