itk::TimeVaryingBSplineVelocityFieldTransformParametersAdaptor< TTransform > Class Template Reference

#include <itkTimeVaryingBSplineVelocityFieldTransformParametersAdaptor.h>

Inheritance diagram for itk::TimeVaryingBSplineVelocityFieldTransformParametersAdaptor< TTransform >:

Collaboration diagram for itk::TimeVaryingBSplineVelocityFieldTransformParametersAdaptor< TTransform >:

Detailed Description

template<class TTransform>
class itk::TimeVaryingBSplineVelocityFieldTransformParametersAdaptor< TTransform >

TimeVaryingBSplineVelocityFieldTransformParametersAdaptor is a helper class intended to definition.

The fixed parameters store the following information:

• B-spline mesh size
• field origin
• domain spacing
• domain size (note that domain_spacing * (domain_size - 1) = physical dimensions of transform domain)
• field direction During multiresolution image registration it is often desired to also increase the displacement field resolution for greater flexibility in optimizing the transform. As defined in the base class, the user can change the resolution via

transformAdaptor->SetTransform( transform );
transformAdaptor->SetRequiredFixedParameters( fixedParameters );
transformAdaptor->AdaptTransformParameters();

or the user can use the more intuitive API for setting the fixed parameters. E.g., often the user will want to maintain the same transform domain spatial extent but only increase the field size and decrease the spacing. This can be done as follows:

transformAdaptor->SetRequiredTransformDomainOrigin( displacementField->GetOrigin() );
transformAdaptor->SetRequiredTransformDomainDirection( displacementField->GetDirection() );
transformAdaptor->SetRequiredTransformDomainSize( requiredSize );
transformAdaptor->SetRequiredTransformDomainSpacing( requiredSpacing );
transformAdaptor->SetRequiredTransformDomainMeshSize( requiredMeshSize );
transformAdaptor->SetSplineOrder( transform->GetSplineOrder() );
transformAdaptor->AdaptTransformParameters();

Author

Nick Tustison

Brian Avants

Definition at line 66 of file itkTimeVaryingBSplineVelocityFieldTransformParametersAdaptor.h.

Public Types
typedef SmartPointer< const Self >	ConstPointer
typedef TimeVaryingVelocityFieldControlPointLatticeType::DirectionType	DirectionType
typedef TimeVaryingVelocityFieldControlPointLatticeType::IndexType	IndexType
typedef TimeVaryingVelocityFieldControlPointLatticeType::SizeType	MeshSizeType
typedef TimeVaryingVelocityFieldControlPointLatticeType::PointType	OriginType
typedef TransformType::ParametersType	ParametersType
typedef TransformType::ParametersValueType	ParametersValueType
typedef SmartPointer< Self >	Pointer
typedef ParametersValueType	RealType
typedef TimeVaryingVelocityFieldControlPointLatticeType::RegionType	RegionType
typedef TimeVaryingBSplineVelocityFieldTransformParametersAdaptor	Self
typedef TimeVaryingVelocityFieldControlPointLatticeType::SizeType	SizeType
typedef TimeVaryingVelocityFieldControlPointLatticeType::SizeValueType	SizeValueType
typedef TimeVaryingVelocityFieldControlPointLatticeType::SpacingType	SpacingType
typedef TransformParametersAdaptor < TTransform >	Superclass
typedef TimeVaryingVelocityFieldControlPointLatticeType::Pointer	TimeVaryingVelocityFieldControlPointLatticePointer
typedef TransformType::TimeVaryingVelocityFieldControlPointLatticeType	TimeVaryingVelocityFieldControlPointLatticeType
typedef TransformType::Pointer	TransformPointer
typedef TTransform	TransformType
typedef TimeVaryingVelocityFieldControlPointLatticeType::PixelType	VectorType
Public Types inherited from itk::TransformParametersAdaptor< TTransform >
typedef SmartPointer< const Self >	ConstPointer
typedef Superclass::ParametersType	ParametersType
typedef Superclass::ParametersValueType	ParametersValueType
typedef SmartPointer< Self >	Pointer
typedef TransformParametersAdaptor	Self
typedef TransformParametersAdaptorBase < TTransform >	Superclass
typedef Superclass::TransformPointer	TransformPointer
typedef TTransform	TransformType
Public Types inherited from itk::TransformParametersAdaptorBase< TTransform >
typedef SmartPointer< const Self >	ConstPointer
typedef TransformType::ParametersType	ParametersType
typedef ParametersType::ValueType	ParametersValueType
typedef SmartPointer< Self >	Pointer
typedef TransformParametersAdaptorBase	Self
typedef Object	Superclass
typedef TransformType::Pointer	TransformPointer
typedef TTransform	TransformType
Public Types inherited from itk::Object
typedef SmartPointer< const Self >	ConstPointer
typedef SmartPointer< Self >	Pointer
typedef Object	Self
typedef LightObject	Superclass
Public Types inherited from itk::LightObject
typedef SmartPointer< const Self >	ConstPointer
typedef SmartPointer< Self >	Pointer
typedef LightObject	Self

Public Member Functions
virtual void	AdaptTransformParameters ()
virtual ::itk::LightObject::Pointer	CreateAnother (void) const
virtual const char *	GetNameOfClass () const
const DirectionType	GetRequiredControlPointLatticeDirection () const
virtual const DirectionType &	GetRequiredTransformDomainDirection ()
virtual const MeshSizeType &	GetRequiredTransformDomainMeshSize ()
virtual const OriginType &	GetRequiredTransformDomainOrigin ()
virtual const SizeType &	GetRequiredTransformDomainSize ()
virtual const SpacingType &	GetRequiredTransformDomainSpacing ()
virtual SizeValueType	GetSplineOrder () const
virtual void	SetRequiredFixedParameters (const ParametersType)
void	SetRequiredTransformDomainDirection (const DirectionType &)
void	SetRequiredTransformDomainMeshSize (const MeshSizeType &)
void	SetRequiredTransformDomainOrigin (const OriginType &)
void	SetRequiredTransformDomainSize (const SizeType &)
void	SetRequiredTransformDomainSpacing (const SpacingType &)
virtual void	SetSplineOrder (SizeValueType _arg)
const OriginType	GetRequiredControlPointLatticeOrigin () const
const SpacingType	GetRequiredControlPointLatticeSpacing () const
const SizeType	GetRequiredControlPointLatticeSize () const
Public Member Functions inherited from itk::TransformParametersAdaptor< TTransform >
virtual ::itk::LightObject::Pointer	CreateAnother (void) const
virtual const ParametersType &	GetRequiredFixedParameters ()
virtual void	SetTransform (TransformType *_arg)

Static Public Member Functions
static Pointer	New ()
Static Public Member Functions inherited from itk::TransformParametersAdaptor< TTransform >
static Pointer	New ()

Static Public Attributes
static const unsigned int	TotalDimension = TransformType::Dimension + 1

Protected Member Functions
void	PrintSelf (std::ostream &os, Indent indent) const
	TimeVaryingBSplineVelocityFieldTransformParametersAdaptor ()
	~TimeVaryingBSplineVelocityFieldTransformParametersAdaptor ()
Protected Member Functions inherited from itk::TransformParametersAdaptor< TTransform >
void	PrintSelf (std::ostream &os, Indent) const
	TransformParametersAdaptor ()
	~TransformParametersAdaptor ()
Protected Member Functions inherited from itk::TransformParametersAdaptorBase< TTransform >
void	PrintSelf (std::ostream &os, Indent indent) const
	TransformParametersAdaptorBase ()
	~TransformParametersAdaptorBase ()
Protected Member Functions inherited from itk::Object
	Object ()
bool	PrintObservers (std::ostream &os, Indent indent) const
virtual void	SetTimeStamp (const TimeStamp &time)
virtual	~Object ()
Protected Member Functions inherited from itk::LightObject
virtual LightObject::Pointer	InternalClone () const
	LightObject ()
virtual void	PrintHeader (std::ostream &os, Indent indent) const
virtual void	PrintTrailer (std::ostream &os, Indent indent) const
virtual	~LightObject ()

Private Member Functions
void	operator= (const Self &)
	TimeVaryingBSplineVelocityFieldTransformParametersAdaptor (const Self &)
void	UpdateRequiredFixedParameters ()

Private Attributes
DirectionType	m_RequiredTransformDomainDirection
MeshSizeType	m_RequiredTransformDomainMeshSize
OriginType	m_RequiredTransformDomainOrigin
SizeType	m_RequiredTransformDomainSize
SpacingType	m_RequiredTransformDomainSpacing
SizeValueType	m_SplineOrder

Additional Inherited Members
Protected Types inherited from itk::LightObject
typedef int	InternalReferenceCountType
Protected Attributes inherited from itk::TransformParametersAdaptor< TTransform >
ParametersType	m_RequiredFixedParameters
TransformPointer	m_Transform

Member Typedef Documentation

template<class TTransform >

typedef SmartPointer<const Self> itk::TimeVaryingBSplineVelocityFieldTransformParametersAdaptor< TTransform >::ConstPointer

Definition at line 75 of file itkTimeVaryingBSplineVelocityFieldTransformParametersAdaptor.h.

template<class TTransform >

typedef TimeVaryingVelocityFieldControlPointLatticeType::DirectionType itk::TimeVaryingBSplineVelocityFieldTransformParametersAdaptor< TTransform >::DirectionType

Definition at line 101 of file itkTimeVaryingBSplineVelocityFieldTransformParametersAdaptor.h.

template<class TTransform >

typedef TimeVaryingVelocityFieldControlPointLatticeType::IndexType itk::TimeVaryingBSplineVelocityFieldTransformParametersAdaptor< TTransform >::IndexType

Definition at line 94 of file itkTimeVaryingBSplineVelocityFieldTransformParametersAdaptor.h.

template<class TTransform >

typedef TimeVaryingVelocityFieldControlPointLatticeType::SizeType itk::TimeVaryingBSplineVelocityFieldTransformParametersAdaptor< TTransform >::MeshSizeType

Definition at line 100 of file itkTimeVaryingBSplineVelocityFieldTransformParametersAdaptor.h.

template<class TTransform >

typedef TimeVaryingVelocityFieldControlPointLatticeType::PointType itk::TimeVaryingBSplineVelocityFieldTransformParametersAdaptor< TTransform >::OriginType

Definition at line 96 of file itkTimeVaryingBSplineVelocityFieldTransformParametersAdaptor.h.

template<class TTransform >

typedef TransformType::ParametersType itk::TimeVaryingBSplineVelocityFieldTransformParametersAdaptor< TTransform >::ParametersType

Definition at line 86 of file itkTimeVaryingBSplineVelocityFieldTransformParametersAdaptor.h.

template<class TTransform >

typedef TransformType::ParametersValueType itk::TimeVaryingBSplineVelocityFieldTransformParametersAdaptor< TTransform >::ParametersValueType

Definition at line 87 of file itkTimeVaryingBSplineVelocityFieldTransformParametersAdaptor.h.

template<class TTransform >

typedef SmartPointer<Self> itk::TimeVaryingBSplineVelocityFieldTransformParametersAdaptor< TTransform >::Pointer

Definition at line 74 of file itkTimeVaryingBSplineVelocityFieldTransformParametersAdaptor.h.

template<class TTransform >

typedef ParametersValueType itk::TimeVaryingBSplineVelocityFieldTransformParametersAdaptor< TTransform >::RealType

Definition at line 89 of file itkTimeVaryingBSplineVelocityFieldTransformParametersAdaptor.h.

template<class TTransform >

typedef TimeVaryingVelocityFieldControlPointLatticeType::RegionType itk::TimeVaryingBSplineVelocityFieldTransformParametersAdaptor< TTransform >::RegionType

Definition at line 93 of file itkTimeVaryingBSplineVelocityFieldTransformParametersAdaptor.h.

template<class TTransform >

typedef TimeVaryingBSplineVelocityFieldTransformParametersAdaptor itk::TimeVaryingBSplineVelocityFieldTransformParametersAdaptor< TTransform >::Self

Standard class typedefs.

Definition at line 72 of file itkTimeVaryingBSplineVelocityFieldTransformParametersAdaptor.h.

template<class TTransform >

typedef TimeVaryingVelocityFieldControlPointLatticeType::SizeType itk::TimeVaryingBSplineVelocityFieldTransformParametersAdaptor< TTransform >::SizeType

Definition at line 98 of file itkTimeVaryingBSplineVelocityFieldTransformParametersAdaptor.h.

template<class TTransform >

typedef TimeVaryingVelocityFieldControlPointLatticeType::SizeValueType itk::TimeVaryingBSplineVelocityFieldTransformParametersAdaptor< TTransform >::SizeValueType

Definition at line 99 of file itkTimeVaryingBSplineVelocityFieldTransformParametersAdaptor.h.

template<class TTransform >

typedef TimeVaryingVelocityFieldControlPointLatticeType::SpacingType itk::TimeVaryingBSplineVelocityFieldTransformParametersAdaptor< TTransform >::SpacingType

Definition at line 97 of file itkTimeVaryingBSplineVelocityFieldTransformParametersAdaptor.h.

template<class TTransform >

typedef TransformParametersAdaptor<TTransform> itk::TimeVaryingBSplineVelocityFieldTransformParametersAdaptor< TTransform >::Superclass

Definition at line 73 of file itkTimeVaryingBSplineVelocityFieldTransformParametersAdaptor.h.

template<class TTransform >

typedef TimeVaryingVelocityFieldControlPointLatticeType::Pointer itk::TimeVaryingBSplineVelocityFieldTransformParametersAdaptor< TTransform >::TimeVaryingVelocityFieldControlPointLatticePointer

Definition at line 92 of file itkTimeVaryingBSplineVelocityFieldTransformParametersAdaptor.h.

template<class TTransform >

typedef TransformType::TimeVaryingVelocityFieldControlPointLatticeType itk::TimeVaryingBSplineVelocityFieldTransformParametersAdaptor< TTransform >::TimeVaryingVelocityFieldControlPointLatticeType

Definition at line 91 of file itkTimeVaryingBSplineVelocityFieldTransformParametersAdaptor.h.

template<class TTransform >

typedef TransformType::Pointer itk::TimeVaryingBSplineVelocityFieldTransformParametersAdaptor< TTransform >::TransformPointer

Definition at line 85 of file itkTimeVaryingBSplineVelocityFieldTransformParametersAdaptor.h.

template<class TTransform >

typedef TTransform itk::TimeVaryingBSplineVelocityFieldTransformParametersAdaptor< TTransform >::TransformType

Typedefs associated with the transform

Definition at line 81 of file itkTimeVaryingBSplineVelocityFieldTransformParametersAdaptor.h.

template<class TTransform >

typedef TimeVaryingVelocityFieldControlPointLatticeType::PixelType itk::TimeVaryingBSplineVelocityFieldTransformParametersAdaptor< TTransform >::VectorType

Definition at line 95 of file itkTimeVaryingBSplineVelocityFieldTransformParametersAdaptor.h.

Constructor & Destructor Documentation

template<class TTransform >

itk::TimeVaryingBSplineVelocityFieldTransformParametersAdaptor< TTransform >::TimeVaryingBSplineVelocityFieldTransformParametersAdaptor ( )

protected

template<class TTransform >

itk::TimeVaryingBSplineVelocityFieldTransformParametersAdaptor< TTransform >::~TimeVaryingBSplineVelocityFieldTransformParametersAdaptor ( )

protected

template<class TTransform >

itk::TimeVaryingBSplineVelocityFieldTransformParametersAdaptor< TTransform >::TimeVaryingBSplineVelocityFieldTransformParametersAdaptor ( const Self &  )

private

Member Function Documentation

template<class TTransform >

virtual void itk::TimeVaryingBSplineVelocityFieldTransformParametersAdaptor< TTransform >::AdaptTransformParameters ( )

virtual

Initialize the transform using the specified fixed parameters

Reimplemented from itk::TransformParametersAdaptor< TTransform >.

template<class TTransform >

virtual::itk::LightObject::Pointer itk::TimeVaryingBSplineVelocityFieldTransformParametersAdaptor< TTransform >::CreateAnother ( void  ) const

virtual

Create an object from an instance, potentially deferring to a factory. This method allows you to create an instance of an object that is exactly the same type as the referring object. This is useful in cases where an object has been cast back to a base class.

Reimplemented from itk::Object.

template<class TTransform >

virtual const char* itk::TimeVaryingBSplineVelocityFieldTransformParametersAdaptor< TTransform >::GetNameOfClass ( ) const

virtual

Run-time type information (and related methods).

Reimplemented from itk::TransformParametersAdaptor< TTransform >.

template<class TTransform >

const DirectionType itk::TimeVaryingBSplineVelocityFieldTransformParametersAdaptor< TTransform >::GetRequiredControlPointLatticeDirection ( ) const

inline

Get the required control point lattice direction.

Definition at line 181 of file itkTimeVaryingBSplineVelocityFieldTransformParametersAdaptor.h.

template<class TTransform >

const OriginType itk::TimeVaryingBSplineVelocityFieldTransformParametersAdaptor< TTransform >::GetRequiredControlPointLatticeOrigin ( ) const

inline

Get the required control point lattice origin.

Definition at line 143 of file itkTimeVaryingBSplineVelocityFieldTransformParametersAdaptor.h.

template<class TTransform >

const SizeType itk::TimeVaryingBSplineVelocityFieldTransformParametersAdaptor< TTransform >::GetRequiredControlPointLatticeSize ( ) const

inline

Get the required control point lattice size.

Definition at line 169 of file itkTimeVaryingBSplineVelocityFieldTransformParametersAdaptor.h.

template<class TTransform >

const SpacingType itk::TimeVaryingBSplineVelocityFieldTransformParametersAdaptor< TTransform >::GetRequiredControlPointLatticeSpacing ( ) const

inline

Get the required control point lattice spacing.

Definition at line 155 of file itkTimeVaryingBSplineVelocityFieldTransformParametersAdaptor.h.

template<class TTransform >

virtual const DirectionType& itk::TimeVaryingBSplineVelocityFieldTransformParametersAdaptor< TTransform >::GetRequiredTransformDomainDirection ( )

virtual

Get the required direction.

template<class TTransform >

virtual const MeshSizeType& itk::TimeVaryingBSplineVelocityFieldTransformParametersAdaptor< TTransform >::GetRequiredTransformDomainMeshSize ( )

virtual

Get the required mesh size.

template<class TTransform >

virtual const OriginType& itk::TimeVaryingBSplineVelocityFieldTransformParametersAdaptor< TTransform >::GetRequiredTransformDomainOrigin ( )

virtual

Get the required origin.

template<class TTransform >

virtual const SizeType& itk::TimeVaryingBSplineVelocityFieldTransformParametersAdaptor< TTransform >::GetRequiredTransformDomainSize ( )

virtual

Get the required domain size.

template<class TTransform >

virtual const SpacingType& itk::TimeVaryingBSplineVelocityFieldTransformParametersAdaptor< TTransform >::GetRequiredTransformDomainSpacing ( )

virtual

Get the required domain spacing.

template<class TTransform >

virtual SizeValueType itk::TimeVaryingBSplineVelocityFieldTransformParametersAdaptor< TTransform >::GetSplineOrder ( ) const

virtual

Get spline order (usually from transform)

template<class TTransform >

static Pointer itk::TimeVaryingBSplineVelocityFieldTransformParametersAdaptor< TTransform >::New ( )

static

New macro for creation of through a Smart Pointer.

template<class TTransform >

void itk::TimeVaryingBSplineVelocityFieldTransformParametersAdaptor< TTransform >::operator= ( const Self &  )

private

template<class TTransform >

void itk::TimeVaryingBSplineVelocityFieldTransformParametersAdaptor< TTransform >::PrintSelf ( std::ostream &  os, Indent  indent  ) const

protectedvirtual

Methods invoked by Print() to print information about the object including superclasses. Typically not called by the user (use Print() instead) but used in the hierarchical print process to combine the output of several classes.

Reimplemented from itk::Object.

template<class TTransform >

virtual void itk::TimeVaryingBSplineVelocityFieldTransformParametersAdaptor< TTransform >::SetRequiredFixedParameters ( const ParametersType  _arg )

virtual

Set the fixed parameters

Reimplemented from itk::TransformParametersAdaptor< TTransform >.

template<class TTransform >

void itk::TimeVaryingBSplineVelocityFieldTransformParametersAdaptor< TTransform >::SetRequiredTransformDomainDirection

(

const DirectionType &

)

Alternative method for setting the required direction.

template<class TTransform >

void itk::TimeVaryingBSplineVelocityFieldTransformParametersAdaptor< TTransform >::SetRequiredTransformDomainMeshSize

(

const MeshSizeType &

)

Alternative method for setting the required mesh size.

template<class TTransform >

void itk::TimeVaryingBSplineVelocityFieldTransformParametersAdaptor< TTransform >::SetRequiredTransformDomainOrigin

(

const OriginType &

)

Alternative method for setting the required origin.

template<class TTransform >

void itk::TimeVaryingBSplineVelocityFieldTransformParametersAdaptor< TTransform >::SetRequiredTransformDomainSize

(

const SizeType &

)

Alternative method for setting the required sampled size.

template<class TTransform >

void itk::TimeVaryingBSplineVelocityFieldTransformParametersAdaptor< TTransform >::SetRequiredTransformDomainSpacing

(

const SpacingType &

)

Alternative method for setting the required sampled spacing.

template<class TTransform >

virtual void itk::TimeVaryingBSplineVelocityFieldTransformParametersAdaptor< TTransform >::SetSplineOrder ( SizeValueType  _arg )

virtual

Set spline order (usually from transform)

template<class TTransform >

void itk::TimeVaryingBSplineVelocityFieldTransformParametersAdaptor< TTransform >::UpdateRequiredFixedParameters ( )

private

Helper function to set m_RequiredFixedParameters

Member Data Documentation

template<class TTransform >

DirectionType itk::TimeVaryingBSplineVelocityFieldTransformParametersAdaptor< TTransform >::m_RequiredTransformDomainDirection

private

Definition at line 206 of file itkTimeVaryingBSplineVelocityFieldTransformParametersAdaptor.h.

template<class TTransform >

MeshSizeType itk::TimeVaryingBSplineVelocityFieldTransformParametersAdaptor< TTransform >::m_RequiredTransformDomainMeshSize

private

Definition at line 204 of file itkTimeVaryingBSplineVelocityFieldTransformParametersAdaptor.h.

template<class TTransform >

OriginType itk::TimeVaryingBSplineVelocityFieldTransformParametersAdaptor< TTransform >::m_RequiredTransformDomainOrigin

private

Definition at line 205 of file itkTimeVaryingBSplineVelocityFieldTransformParametersAdaptor.h.

template<class TTransform >

SizeType itk::TimeVaryingBSplineVelocityFieldTransformParametersAdaptor< TTransform >::m_RequiredTransformDomainSize

private

Definition at line 208 of file itkTimeVaryingBSplineVelocityFieldTransformParametersAdaptor.h.

template<class TTransform >

SpacingType itk::TimeVaryingBSplineVelocityFieldTransformParametersAdaptor< TTransform >::m_RequiredTransformDomainSpacing

private

Definition at line 207 of file itkTimeVaryingBSplineVelocityFieldTransformParametersAdaptor.h.

template<class TTransform >

SizeValueType itk::TimeVaryingBSplineVelocityFieldTransformParametersAdaptor< TTransform >::m_SplineOrder

private

Definition at line 210 of file itkTimeVaryingBSplineVelocityFieldTransformParametersAdaptor.h.

template<class TTransform >

const unsigned int itk::TimeVaryingBSplineVelocityFieldTransformParametersAdaptor< TTransform >::TotalDimension = TransformType::Dimension + 1

static

Dimension of parameters.

Definition at line 104 of file itkTimeVaryingBSplineVelocityFieldTransformParametersAdaptor.h.

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The documentation for this class was generated from the following file:

• itkTimeVaryingBSplineVelocityFieldTransformParametersAdaptor.h