ITK
4.6.0
Insight Segmentation and Registration Toolkit
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#include <itkDCMTKSeriesFileNames.h>
Generate a sequence of filenames from a DICOM series.
This class generate a sequence of files whose filenames points to a DICOM file. The ordering is based on the following strategy: Read all images in the directory (assuming there is only one study/serie)
If multiple volumes are being grouped as a single series for your dicom objects, you may want to try calling ->SetUseSeriesDetails(true) prior to calling SetDirectory().
Definition at line 51 of file itkDCMTKSeriesFileNames.h.
Static Public Member Functions | |
static Pointer | New () |
Static Public Member Functions inherited from itk::Object | |
static bool | GetGlobalWarningDisplay () |
static void | GlobalWarningDisplayOff () |
static void | GlobalWarningDisplayOn () |
static Pointer | New () |
static void | SetGlobalWarningDisplay (bool flag) |
Static Public Member Functions inherited from itk::LightObject | |
static void | BreakOnError () |
static Pointer | New () |
Private Member Functions | |
DCMTKSeriesFileNames (const Self &) | |
void | GetDicomData (const std::string &series, bool saveFileNames) |
void | operator= (const Self &) |
Private Attributes | |
std::string | m_InputDirectory |
FilenamesContainer | m_InputFileNames |
bool | m_LoadPrivateTags |
bool | m_LoadSequences |
std::string | m_OutputDirectory |
FilenamesContainer | m_OutputFileNames |
bool | m_Recursive |
SeriesUIDContainer | m_SeriesUIDs |
bool | m_UseSeriesDetails |
virtual void | SetLoadPrivateTags (bool _arg) |
virtual bool | GetLoadPrivateTags () const |
virtual void | LoadPrivateTagsOn () |
virtual void | LoadPrivateTagsOff () |
DCMTKSeriesFileNames () | |
~DCMTKSeriesFileNames () | |
void | PrintSelf (std::ostream &os, Indent indent) const |
typedef std::vector< std::string > itk::DCMTKSeriesFileNames::FilenamesContainer |
Definition at line 59 of file itkDCMTKSeriesFileNames.h.
typedef SmartPointer< Self > itk::DCMTKSeriesFileNames::Pointer |
Definition at line 57 of file itkDCMTKSeriesFileNames.h.
Standard class typedefs.
Definition at line 55 of file itkDCMTKSeriesFileNames.h.
typedef std::vector< std::string > itk::DCMTKSeriesFileNames::SeriesUIDContainer |
Definition at line 60 of file itkDCMTKSeriesFileNames.h.
Definition at line 56 of file itkDCMTKSeriesFileNames.h.
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Parse any private tags in the DICOM file. Defaults to false to skip private tags. This makes loading DICOM files faster when private tags are not needed.
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Parse any private tags in the DICOM file. Defaults to false to skip private tags. This makes loading DICOM files faster when private tags are not needed.
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Add more restriction on the selection of a Series. This follow the same approach as SetUseSeriesDetails, but allow a user to add even more DICOM tags to take into account for subrefining a set of DICOM files into multiple series. Format for tag is "group|element" of a DICOM tag.
Definition at line 144 of file itkDCMTKSeriesFileNames.h.
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Create an object from an instance, potentially deferring to a factory. This method allows you to create an instance of an object that is exactly the same type as the referring object. This is useful in cases where an object has been cast back to a base class.
Reimplemented from itk::Object.
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internal method for reading out filenames and UID lists
const FilenamesContainer& itk::DCMTKSeriesFileNames::GetFileNames | ( | const std::string | serie | ) |
Returns a vector containing the series' file names. The file names are ordered by the strategy define in header. All DICOM files have the same exact UID equal to the one user's specified. An extended UID may be returned/used if SetUseSeriesDetails(true) has been called.
const FilenamesContainer& itk::DCMTKSeriesFileNames::GetInputFileNames | ( | ) |
Returns a vector containing the series' file names. The file names are ordered by the strategy define in header. No sorting is done based on UID
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Parse any private tags in the DICOM file. Defaults to false to skip private tags. This makes loading DICOM files faster when private tags are not needed.
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Parse any sequences in the DICOM file. Defaults to false to skip sequences. This makes loading DICOM files faster when sequences are not needed.
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Run-time type information (and related methods).
Reimplemented from itk::ProcessObject.
const FilenamesContainer& itk::DCMTKSeriesFileNames::GetOutputFileNames | ( | ) |
Returns a vector containing the series' file names. The file names are ordered in the same extact order as the input one. This could be dangerous if the writing has changed 3rd position or some other DICOM tag in the header
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Recursively parse the input directory
const SeriesUIDContainer& itk::DCMTKSeriesFileNames::GetSeriesUIDs | ( | ) |
Returns a vector containing all the UIDs found when parsing the direcory specified via SetDirectory. If no direcory is specified return an empty vector. An extended UID may be returned/used if SetUseSeriesDetails(true) has been called.
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Returns true if using additional series information such as ProtocolName and SeriesName to identify when a single SeriesUID contains multiple 3D volumes - as can occur with perfusion and DTI imaging
Definition at line 133 of file itkDCMTKSeriesFileNames.h.
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Parse any private tags in the DICOM file. Defaults to false to skip private tags. This makes loading DICOM files faster when private tags are not needed.
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Parse any private tags in the DICOM file. Defaults to false to skip private tags. This makes loading DICOM files faster when private tags are not needed.
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Parse any sequences in the DICOM file. Defaults to false to skip sequences. This makes loading DICOM files faster when sequences are not needed.
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Parse any sequences in the DICOM file. Defaults to false to skip sequences. This makes loading DICOM files faster when sequences are not needed.
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Method for creation through the object factory.
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Parse any private tags in the DICOM file. Defaults to false to skip private tags. This makes loading DICOM files faster when private tags are not needed.
Reimplemented from itk::ProcessObject.
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Recursively parse the input directory
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Recursively parse the input directory
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Set the directory that contains the DICOM series.
Definition at line 77 of file itkDCMTKSeriesFileNames.h.
void itk::DCMTKSeriesFileNames::SetInputDirectory | ( | const char * | name | ) |
Set the directory that contains the DICOM series.
void itk::DCMTKSeriesFileNames::SetInputDirectory | ( | std::string const & | name | ) |
Set the directory that contains the DICOM series.
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Parse any private tags in the DICOM file. Defaults to false to skip private tags. This makes loading DICOM files faster when private tags are not needed.
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Parse any sequences in the DICOM file. Defaults to false to skip sequences. This makes loading DICOM files faster when sequences are not needed.
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Set the directory where the output DICOM serie should be written.
Definition at line 88 of file itkDCMTKSeriesFileNames.h.
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Recursively parse the input directory
void itk::DCMTKSeriesFileNames::SetUseSeriesDetails | ( | bool | useSeriesDetails | ) |
Use additional series information such as ProtocolName and SeriesName to identify when a single SeriesUID contains multiple 3D volumes - as can occur with perfusion and DTI imaging
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Contains the input directory where the DICOM serie is found
Definition at line 179 of file itkDCMTKSeriesFileNames.h.
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Internal structure to keep the list of input/output filenames
Definition at line 185 of file itkDCMTKSeriesFileNames.h.
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Definition at line 196 of file itkDCMTKSeriesFileNames.h.
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Definition at line 195 of file itkDCMTKSeriesFileNames.h.
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Contains the output directory where the DICOM serie should be written
Definition at line 182 of file itkDCMTKSeriesFileNames.h.
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Definition at line 186 of file itkDCMTKSeriesFileNames.h.
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Definition at line 194 of file itkDCMTKSeriesFileNames.h.
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Internal structure to order serie from one directory Internal structure to keep the list of series UIDs
Definition at line 191 of file itkDCMTKSeriesFileNames.h.
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Definition at line 193 of file itkDCMTKSeriesFileNames.h.