ITK  4.6.0
Insight Segmentation and Registration Toolkit
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itk::DemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField > Class Template Reference

#include <itkDemonsRegistrationFilter.h>

+ Inheritance diagram for itk::DemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >:
+ Collaboration diagram for itk::DemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >:

Detailed Description

template<typename TFixedImage, typename TMovingImage, typename TDisplacementField>
class itk::DemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >

Deformably register two images using the demons algorithm.

DemonsRegistrationFilter implements the demons deformable algorithm that register two images by computing the displacement field which will map a moving image onto a fixed image.

A displacement field is represented as a image whose pixel type is some vector type with at least N elements, where N is the dimension of the fixed image. The vector type must support element access via operator []. It is assumed that the vector elements behave like floating point scalars.

This class is templated over the fixed image type, moving image type and the displacement field type.

The input fixed and moving images are set via methods SetFixedImage and SetMovingImage respectively. An initial displacement field maybe set via SetInitialDisplacementField or SetInput. If no initial field is set, a zero field is used as the initial condition.

The algorithm has one parameters: the number of iteration to be performed.

The output displacement field can be obtained via methods GetOutput or GetDisplacementField.

This class make use of the finite difference solver hierarchy. Update for each iteration is computed in DemonsRegistrationFunction.

Warning
This filter assumes that the fixed image type, moving image type and displacement field type all have the same number of dimensions.
See Also
DemonsRegistrationFunction
Examples:
RegistrationITKv3/DeformableRegistration16.cxx, RegistrationITKv3/DeformableRegistration2.cxx, RegistrationITKv4/DeformableRegistration16.cxx, and RegistrationITKv4/DeformableRegistration2.cxx.

Definition at line 63 of file itkDemonsRegistrationFilter.h.

Public Types

typedef SmartPointer< const SelfConstPointer
 
typedef
DemonsRegistrationFunction
< FixedImageType,
MovingImageType,
DisplacementFieldType
DemonsRegistrationFunctionType
 
typedef
Superclass::DisplacementFieldPointer 
DisplacementFieldPointer
 
typedef
Superclass::DisplacementFieldType 
DisplacementFieldType
 
typedef
Superclass::FiniteDifferenceFunctionType 
FiniteDifferenceFunctionType
 
typedef
Superclass::FixedImagePointer 
FixedImagePointer
 
typedef Superclass::FixedImageType FixedImageType
 
typedef
Superclass::MovingImagePointer 
MovingImagePointer
 
typedef Superclass::MovingImageType MovingImageType
 
typedef SmartPointer< SelfPointer
 
typedef DemonsRegistrationFilter Self
 
typedef
PDEDeformableRegistrationFilter
< TFixedImage, TMovingImage,
TDisplacementField > 
Superclass
 
typedef Superclass::TimeStepType TimeStepType
 
- Public Types inherited from itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >
typedef SmartPointer< const SelfConstPointer
 
typedef
DisplacementFieldType::Pointer 
DisplacementFieldPointer
 
typedef TDisplacementField DisplacementFieldType
 
typedef
Superclass::FiniteDifferenceFunctionType 
FiniteDifferenceFunctionType
 
typedef
FixedImageType::ConstPointer 
FixedImageConstPointer
 
typedef FixedImageType::Pointer FixedImagePointer
 
typedef TFixedImage FixedImageType
 
typedef
MovingImageType::ConstPointer 
MovingImageConstPointer
 
typedef MovingImageType::Pointer MovingImagePointer
 
typedef TMovingImage MovingImageType
 
typedef Superclass::OutputImageType OutputImageType
 
typedef
PDEDeformableRegistrationFunction
< FixedImageType,
MovingImageType,
DisplacementFieldType
PDEDeformableRegistrationFunctionType
 
typedef SmartPointer< SelfPointer
 
typedef
PDEDeformableRegistrationFilter 
Self
 
typedef FixedArray< double,
ImageDimension
StandardDeviationsType
 
typedef
DenseFiniteDifferenceImageFilter
< TDisplacementField,
TDisplacementField > 
Superclass
 
- Public Types inherited from itk::DenseFiniteDifferenceImageFilter< TDisplacementField, TDisplacementField >
typedef SmartPointer< const SelfConstPointer
 
typedef
Superclass::FiniteDifferenceFunctionType 
FiniteDifferenceFunctionType
 
typedef Superclass::InputImageType InputImageType
 
typedef Superclass::OutputImageType OutputImageType
 
typedef Superclass::PixelType PixelType
 
typedef SmartPointer< SelfPointer
 
typedef
DenseFiniteDifferenceImageFilter 
Self
 
typedef
FiniteDifferenceImageFilter
< TDisplacementField,
TDisplacementField > 
Superclass
 
typedef Superclass::TimeStepType TimeStepType
 
typedef OutputImageType UpdateBufferType
 
- Public Types inherited from itk::FiniteDifferenceImageFilter< TDisplacementField, TDisplacementField >
typedef SmartPointer< const SelfConstPointer
 
typedef
FiniteDifferenceFunction
< TDisplacementField > 
FiniteDifferenceFunctionType
 
typedef TDisplacementField InputImageType
 
typedef
TDisplacementField::PixelType 
InputPixelType
 
typedef NumericTraits
< InputPixelType >::ValueType 
InputPixelValueType
 
typedef
FiniteDifferenceFunctionType::NeighborhoodScalesType 
NeighborhoodScalesType
 
typedef TDisplacementField OutputImageType
 
typedef
TDisplacementField::PixelType 
OutputPixelType
 
typedef NumericTraits
< OutputPixelType >::ValueType 
OutputPixelValueType
 
typedef OutputPixelType PixelType
 
typedef SmartPointer< SelfPointer
 
typedef
FiniteDifferenceFunctionType::RadiusType 
RadiusType
 
typedef FiniteDifferenceImageFilter Self
 
typedef InPlaceImageFilter
< TDisplacementField,
TDisplacementField > 
Superclass
 
typedef
FiniteDifferenceFunctionType::TimeStepType 
TimeStepType
 
- Public Types inherited from itk::InPlaceImageFilter< TDisplacementField, TDisplacementField >
typedef SmartPointer< const SelfConstPointer
 
typedef
InputImageType::ConstPointer 
InputImageConstPointer
 
typedef InputImageType::PixelType InputImagePixelType
 
typedef InputImageType::Pointer InputImagePointer
 
typedef InputImageType::RegionType InputImageRegionType
 
typedef TDisplacementField InputImageType
 
typedef
Superclass::OutputImagePixelType 
OutputImagePixelType
 
typedef
Superclass::OutputImagePointer 
OutputImagePointer
 
typedef
Superclass::OutputImageRegionType 
OutputImageRegionType
 
typedef Superclass::OutputImageType OutputImageType
 
typedef SmartPointer< SelfPointer
 
typedef InPlaceImageFilter Self
 
typedef ImageToImageFilter
< TDisplacementField,
TDisplacementField > 
Superclass
 
- Public Types inherited from itk::ImageToImageFilter< TDisplacementField, TDisplacementField >
typedef SmartPointer< const SelfConstPointer
 
typedef
InputImageType::ConstPointer 
InputImageConstPointer
 
typedef InputImageType::PixelType InputImagePixelType
 
typedef InputImageType::Pointer InputImagePointer
 
typedef InputImageType::RegionType InputImageRegionType
 
typedef TDisplacementField InputImageType
 
typedef
Superclass::OutputImagePixelType 
OutputImagePixelType
 
typedef
Superclass::OutputImageRegionType 
OutputImageRegionType
 
typedef SmartPointer< SelfPointer
 
typedef ImageToImageFilter Self
 
typedef ImageSource
< TDisplacementField > 
Superclass
 
- Public Types inherited from itk::ImageSource< TDisplacementField >
typedef SmartPointer< const SelfConstPointer
 
typedef
Superclass::DataObjectIdentifierType 
DataObjectIdentifierType
 
typedef DataObject::Pointer DataObjectPointer
 
typedef
Superclass::DataObjectPointerArraySizeType 
DataObjectPointerArraySizeType
 
typedef OutputImageType::PixelType OutputImagePixelType
 
typedef OutputImageType::Pointer OutputImagePointer
 
typedef OutputImageType::RegionType OutputImageRegionType
 
typedef TDisplacementField OutputImageType
 
typedef SmartPointer< SelfPointer
 
typedef ImageSource Self
 
typedef ProcessObject Superclass
 
- Public Types inherited from itk::ProcessObject
typedef SmartPointer< const SelfConstPointer
 
typedef
DataObject::DataObjectIdentifierType 
DataObjectIdentifierType
 
typedef DataObject::Pointer DataObjectPointer
 
typedef std::vector
< DataObjectPointer
DataObjectPointerArray
 
typedef
DataObjectPointerArray::size_type 
DataObjectPointerArraySizeType
 
typedef std::vector
< DataObjectIdentifierType
NameArray
 
typedef SmartPointer< SelfPointer
 
typedef ProcessObject Self
 
typedef Object Superclass
 
- Public Types inherited from itk::Object
typedef SmartPointer< const SelfConstPointer
 
typedef SmartPointer< SelfPointer
 
typedef Object Self
 
typedef LightObject Superclass
 
- Public Types inherited from itk::LightObject
typedef SmartPointer< const SelfConstPointer
 
typedef SmartPointer< SelfPointer
 
typedef LightObject Self
 

Public Member Functions

virtual ::itk::LightObject::Pointer CreateAnother (void) const
 
virtual double GetIntensityDifferenceThreshold () const
 
virtual double GetMetric () const
 
virtual const char * GetNameOfClass () const
 
virtual void SetIntensityDifferenceThreshold (double)
 
virtual void SetUseMovingImageGradient (bool _arg)
 
virtual bool GetUseMovingImageGradient () const
 
virtual void UseMovingImageGradientOn ()
 
virtual void UseMovingImageGradientOff ()
 
- Public Member Functions inherited from itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >
virtual ::itk::LightObject::Pointer CreateAnother (void) const
 
DisplacementFieldTypeGetDisplacementField ()
 
const FixedImageTypeGetFixedImage (void) const
 
const MovingImageTypeGetMovingImage (void) const
 
virtual std::vector
< SmartPointer< DataObject >
>::size_type 
GetNumberOfValidRequiredInputs () const
 
virtual const
StandardDeviationsType
GetStandardDeviations () const
 
virtual const
StandardDeviationsType
GetUpdateFieldStandardDeviations () const
 
void SetFixedImage (const FixedImageType *ptr)
 
void SetInitialDisplacementField (const DisplacementFieldType *ptr)
 
void SetMovingImage (const MovingImageType *ptr)
 
virtual void StopRegistration ()
 
virtual void SetSmoothDisplacementField (bool _arg)
 
virtual bool GetSmoothDisplacementField () const
 
virtual void SmoothDisplacementFieldOn ()
 
virtual void SmoothDisplacementFieldOff ()
 
virtual void SetStandardDeviations (StandardDeviationsType _arg)
 
virtual void SetStandardDeviations (double value)
 
virtual void SetSmoothUpdateField (bool _arg)
 
virtual bool GetSmoothUpdateField () const
 
virtual void SmoothUpdateFieldOn ()
 
virtual void SmoothUpdateFieldOff ()
 
virtual void SetUpdateFieldStandardDeviations (StandardDeviationsType _arg)
 
virtual void SetUpdateFieldStandardDeviations (double value)
 
virtual void SetMaximumError (double _arg)
 
virtual double GetMaximumError () const
 
virtual void SetMaximumKernelWidth (unsigned int _arg)
 
virtual unsigned int GetMaximumKernelWidth () const
 
- Public Member Functions inherited from itk::DenseFiniteDifferenceImageFilter< TDisplacementField, TDisplacementField >
 typedef (Concept::MultiplyOperator< PixelType, double >) OutputTimesDoubleCheck
 
 typedef (Concept::AdditiveOperators< PixelType >) OutputAdditiveOperatorsCheck
 
 typedef (Concept::AdditiveAndAssignOperators< PixelType >) OutputAdditiveAndAssignOperatorsCheck
 
 typedef (Concept::Convertible< typename TDisplacementField::PixelType, PixelType >) InputConvertibleToOutputCheck
 
- Public Member Functions inherited from itk::FiniteDifferenceImageFilter< TDisplacementField, TDisplacementField >
virtual const
FiniteDifferenceFunctionType::Pointer
GetDifferenceFunction () const
 
virtual const IdentifierTypeGetElapsedIterations () const
 
virtual bool GetIsInitialized ()
 
virtual void SetDifferenceFunction (FiniteDifferenceFunctionType *_arg)
 
virtual void SetIsInitialized (bool _arg)
 
void SetStateToInitialized ()
 
void SetStateToUninitialized ()
 
virtual void SetNumberOfIterations (IdentifierType _arg)
 
virtual const IdentifierTypeGetNumberOfIterations () const
 
virtual void SetUseImageSpacing (bool _arg)
 
virtual void UseImageSpacingOn ()
 
virtual void UseImageSpacingOff ()
 
virtual const bool & GetUseImageSpacing () const
 
virtual void SetMaximumRMSError (double _arg)
 
virtual const double & GetMaximumRMSError () const
 
virtual void SetRMSChange (double _arg)
 
virtual const double & GetRMSChange () const
 
virtual void SetManualReinitialization (bool _arg)
 
virtual const bool & GetManualReinitialization () const
 
virtual void ManualReinitializationOn ()
 
virtual void ManualReinitializationOff ()
 
- Public Member Functions inherited from itk::InPlaceImageFilter< TDisplacementField, TDisplacementField >
virtual bool CanRunInPlace () const
 
virtual void SetInPlace (bool _arg)
 
virtual bool GetInPlace () const
 
virtual void InPlaceOn ()
 
virtual void InPlaceOff ()
 
- Public Member Functions inherited from itk::ImageToImageFilter< TDisplacementField, TDisplacementField >
const InputImageTypeGetInput (void) const
 
const InputImageTypeGetInput (unsigned int idx) const
 
virtual void PopBackInput ()
 
virtual void PopFrontInput ()
 
virtual void PushBackInput (const InputImageType *image)
 
virtual void PushFrontInput (const InputImageType *image)
 
virtual void SetInput (const InputImageType *image)
 
virtual void SetInput (unsigned int, const TDisplacementField *image)
 
virtual void SetCoordinateTolerance (double _arg)
 
virtual double GetCoordinateTolerance () const
 
virtual void SetDirectionTolerance (double _arg)
 
virtual double GetDirectionTolerance () const
 
- Public Member Functions inherited from itk::ImageSource< TDisplacementField >
OutputImageTypeGetOutput (unsigned int idx)
 
virtual void GraftNthOutput (unsigned int idx, DataObject *output)
 
virtual void GraftOutput (DataObject *output)
 
virtual void GraftOutput (const DataObjectIdentifierType &key, DataObject *output)
 
OutputImageTypeGetOutput (void)
 
const OutputImageTypeGetOutput (void) const
 
virtual
ProcessObject::DataObjectPointer 
MakeOutput (ProcessObject::DataObjectPointerArraySizeType idx) ITK_OVERRIDE
 
- Public Member Functions inherited from itk::ProcessObject
virtual void AbortGenerateDataOff ()
 
virtual void AbortGenerateDataOn ()
 
virtual void EnlargeOutputRequestedRegion (DataObject *)
 
virtual const bool & GetAbortGenerateData () const
 
NameArray GetInputNames () const
 
MultiThreader * GetMultiThreader () const
 
DataObjectPointerArraySizeType GetNumberOfIndexedInputs () const
 
DataObjectPointerArraySizeType GetNumberOfInputs () const
 
DataObjectPointerArraySizeType GetNumberOfOutputs () const
 
NameArray GetOutputNames () const
 
virtual const float & GetProgress () const
 
NameArray GetRequiredInputNames () const
 
bool HasInput (const DataObjectIdentifierType &key) const
 
bool HasOutput (const DataObjectIdentifierType &key) const
 
virtual DataObjectPointer MakeOutput (const DataObjectIdentifierType &)
 
virtual void PrepareOutputs ()
 
virtual void PropagateRequestedRegion (DataObject *output)
 
virtual void ResetPipeline ()
 
virtual void SetAbortGenerateData (bool _arg)
 
virtual void Update ()
 
virtual void UpdateLargestPossibleRegion ()
 
virtual void UpdateOutputData (DataObject *output)
 
virtual void UpdateOutputInformation ()
 
void UpdateProgress (float progress)
 
DataObjectPointerArray GetInputs ()
 
DataObjectPointerArray GetOutputs ()
 
DataObjectPointerArray GetIndexedInputs ()
 
DataObjectPointerArray GetIndexedOutputs ()
 
DataObjectPointerArraySizeType GetNumberOfIndexedOutputs () const
 
void SetProgress (float progress)
 
virtual void SetReleaseDataFlag (bool flag)
 
virtual bool GetReleaseDataFlag () const
 
void ReleaseDataFlagOn ()
 
void ReleaseDataFlagOff ()
 
virtual void SetReleaseDataBeforeUpdateFlag (bool _arg)
 
virtual const bool & GetReleaseDataBeforeUpdateFlag () const
 
virtual void ReleaseDataBeforeUpdateFlagOn ()
 
virtual void ReleaseDataBeforeUpdateFlagOff ()
 
virtual void SetNumberOfThreads (ThreadIdType _arg)
 
virtual const ThreadIdTypeGetNumberOfThreads () const
 
- Public Member Functions inherited from itk::Object
unsigned long AddObserver (const EventObject &event, Command *)
 
unsigned long AddObserver (const EventObject &event, Command *) const
 
virtual void DebugOff () const
 
virtual void DebugOn () const
 
CommandGetCommand (unsigned long tag)
 
bool GetDebug () const
 
MetaDataDictionaryGetMetaDataDictionary (void)
 
const MetaDataDictionaryGetMetaDataDictionary (void) const
 
virtual ModifiedTimeType GetMTime () const
 
virtual const TimeStampGetTimeStamp () const
 
bool HasObserver (const EventObject &event) const
 
void InvokeEvent (const EventObject &)
 
void InvokeEvent (const EventObject &) const
 
virtual void Modified () const
 
virtual void Register () const ITK_OVERRIDE
 
void RemoveAllObservers ()
 
void RemoveObserver (unsigned long tag)
 
void SetDebug (bool debugFlag) const
 
void SetMetaDataDictionary (const MetaDataDictionary &rhs)
 
virtual void SetReferenceCount (int) ITK_OVERRIDE
 
virtual void UnRegister () const ITK_OVERRIDE
 
virtual void SetObjectName (std::string _arg)
 
virtual const std::string & GetObjectName () const
 
- Public Member Functions inherited from itk::LightObject
virtual void Delete ()
 
virtual int GetReferenceCount () const
 
 itkCloneMacro (Self)
 
void Print (std::ostream &os, Indent indent=0) const
 

Static Public Member Functions

static Pointer New ()
 
- Static Public Member Functions inherited from itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >
static Pointer New ()
 
- Static Public Member Functions inherited from itk::Object
static bool GetGlobalWarningDisplay ()
 
static void GlobalWarningDisplayOff ()
 
static void GlobalWarningDisplayOn ()
 
static Pointer New ()
 
static void SetGlobalWarningDisplay (bool flag)
 
- Static Public Member Functions inherited from itk::LightObject
static void BreakOnError ()
 
static Pointer New ()
 

Protected Member Functions

virtual void ApplyUpdate (const TimeStepType &dt)
 
 DemonsRegistrationFilter ()
 
virtual void InitializeIteration ()
 
void PrintSelf (std::ostream &os, Indent indent) const
 
virtual void VerifyInputInformation ()
 
- Protected Member Functions inherited from itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >
virtual void CopyInputToOutput ()
 
virtual void GenerateInputRequestedRegion ()
 
virtual void GenerateOutputInformation ()
 
virtual bool Halt ()
 
virtual void Initialize ()
 
 PDEDeformableRegistrationFilter ()
 
virtual void PostProcessOutput ()
 
void PrintSelf (std::ostream &os, Indent indent) const
 
virtual void SmoothDisplacementField ()
 
virtual void SmoothUpdateField ()
 
 ~PDEDeformableRegistrationFilter ()
 
- Protected Member Functions inherited from itk::DenseFiniteDifferenceImageFilter< TDisplacementField, TDisplacementField >
virtual void AllocateUpdateBuffer ()
 
virtual TimeStepType CalculateChange ()
 
 DenseFiniteDifferenceImageFilter ()
 
virtual UpdateBufferTypeGetUpdateBuffer ()
 
void PrintSelf (std::ostream &os, Indent indent) const
 
virtual void ThreadedApplyUpdate (const TimeStepType &dt, const ThreadRegionType &regionToProcess, ThreadIdType threadId)
 
virtual TimeStepType ThreadedCalculateChange (const ThreadRegionType &regionToProcess, ThreadIdType threadId)
 
 ~DenseFiniteDifferenceImageFilter ()
 
- Protected Member Functions inherited from itk::FiniteDifferenceImageFilter< TDisplacementField, TDisplacementField >
virtual void ApplyUpdate (const TimeStepType &dt)=0
 
 FiniteDifferenceImageFilter ()
 
virtual void GenerateData ()
 
void PrintSelf (std::ostream &os, Indent indent) const
 
virtual TimeStepType ResolveTimeStep (const std::vector< TimeStepType > &timeStepList, const std::vector< bool > &valid) const
 
virtual void SetElapsedIterations (IdentifierType _arg)
 
virtual bool ThreadedHalt (void *)
 
virtual ~FiniteDifferenceImageFilter ()
 
- Protected Member Functions inherited from itk::InPlaceImageFilter< TDisplacementField, TDisplacementField >
virtual void AllocateOutputs ()
 
virtual bool GetRunningInPlace () const
 
 InPlaceImageFilter ()
 
virtual void ReleaseInputs ()
 
 ~InPlaceImageFilter ()
 
- Protected Member Functions inherited from itk::ImageToImageFilter< TDisplacementField, TDisplacementField >
virtual void CallCopyInputRegionToOutputRegion (OutputImageRegionType &destRegion, const InputImageRegionType &srcRegion)
 
virtual void CallCopyOutputRegionToInputRegion (InputImageRegionType &destRegion, const OutputImageRegionType &srcRegion)
 
 ImageToImageFilter ()
 
 ~ImageToImageFilter ()
 
void PushBackInput (const DataObject *input)
 
void PushFrontInput (const DataObject *input)
 
- Protected Member Functions inherited from itk::ImageSource< TDisplacementField >
virtual void AfterThreadedGenerateData ()
 
virtual void BeforeThreadedGenerateData ()
 
virtual const
ImageRegionSplitterBase
GetImageRegionSplitter (void) const
 
 ImageSource ()
 
virtual unsigned int SplitRequestedRegion (unsigned int i, unsigned int pieces, OutputImageRegionType &splitRegion)
 
virtual void ThreadedGenerateData (const OutputImageRegionType &outputRegionForThread, ThreadIdType threadId)
 
virtual ~ImageSource ()
 
- Protected Member Functions inherited from itk::ProcessObject
virtual void AddInput (DataObject *input)
 
virtual void AddOutput (DataObject *output)
 
virtual void CacheInputReleaseDataFlags ()
 
virtual void GenerateOutputRequestedRegion (DataObject *output)
 
virtual const
DataObjectPointerArraySizeType
GetNumberOfRequiredOutputs () const
 
bool IsIndexedInputName (const DataObjectIdentifierType &) const
 
bool IsIndexedOutputName (const DataObjectIdentifierType &) const
 
 itkLegacyMacro (virtual void RemoveOutput(DataObject *output))
 
 itkLegacyMacro (void SetNumberOfOutputs(DataObjectPointerArraySizeType num))
 
 itkLegacyMacro (virtual void RemoveInput(DataObject *input))
 
 itkLegacyMacro (void SetNumberOfInputs(DataObjectPointerArraySizeType num))
 
DataObjectPointerArraySizeType MakeIndexFromInputName (const DataObjectIdentifierType &name) const
 
DataObjectPointerArraySizeType MakeIndexFromOutputName (const DataObjectIdentifierType &name) const
 
DataObjectIdentifierType MakeNameFromInputIndex (DataObjectPointerArraySizeType idx) const
 
DataObjectIdentifierType MakeNameFromOutputIndex (DataObjectPointerArraySizeType idx) const
 
 ProcessObject ()
 
virtual void PropagateResetPipeline ()
 
virtual void RemoveInput (const DataObjectIdentifierType &key)
 
virtual void RemoveInput (DataObjectPointerArraySizeType)
 
virtual void RemoveOutput (const DataObjectIdentifierType &key)
 
virtual void RemoveOutput (DataObjectPointerArraySizeType idx)
 
virtual void RestoreInputReleaseDataFlags ()
 
virtual void SetInput (const DataObjectIdentifierType &key, DataObject *input)
 
virtual void SetNthInput (DataObjectPointerArraySizeType num, DataObject *input)
 
virtual void SetNthOutput (DataObjectPointerArraySizeType num, DataObject *output)
 
void SetNumberOfIndexedInputs (DataObjectPointerArraySizeType num)
 
void SetNumberOfIndexedOutputs (DataObjectPointerArraySizeType num)
 
virtual void SetNumberOfRequiredOutputs (DataObjectPointerArraySizeType _arg)
 
virtual void SetOutput (const DataObjectIdentifierType &key, DataObject *output)
 
virtual void SetPrimaryInput (DataObject *input)
 
virtual void SetPrimaryOutput (DataObject *output)
 
virtual void VerifyPreconditions ()
 
 ~ProcessObject ()
 
DataObjectGetInput (const DataObjectIdentifierType &key)
 
const DataObjectGetInput (const DataObjectIdentifierType &key) const
 
DataObjectGetInput (DataObjectPointerArraySizeType idx)
 
const DataObjectGetInput (DataObjectPointerArraySizeType idx) const
 
DataObjectGetPrimaryInput ()
 
const DataObjectGetPrimaryInput () const
 
virtual void SetPrimaryInputName (const DataObjectIdentifierType &key)
 
virtual const char * GetPrimaryInputName (void) const
 
virtual void SetNumberOfRequiredInputs (DataObjectPointerArraySizeType)
 
virtual const
DataObjectPointerArraySizeType
GetNumberOfRequiredInputs () const
 
bool AddRequiredInputName (const DataObjectIdentifierType &)
 
bool AddRequiredInputName (const DataObjectIdentifierType &, DataObjectPointerArraySizeType idx)
 
bool RemoveRequiredInputName (const DataObjectIdentifierType &)
 
bool IsRequiredInputName (const DataObjectIdentifierType &) const
 
void SetRequiredInputNames (const NameArray &)
 
DataObjectGetOutput (const DataObjectIdentifierType &key)
 
const DataObjectGetOutput (const DataObjectIdentifierType &key) const
 
virtual void SetPrimaryOutputName (const DataObjectIdentifierType &key)
 
virtual const char * GetPrimaryOutputName (void) const
 
DataObjectGetOutput (DataObjectPointerArraySizeType idx)
 
const DataObjectGetOutput (DataObjectPointerArraySizeType idx) const
 
DataObjectGetPrimaryOutput ()
 
const DataObjectGetPrimaryOutput () const
 
- Protected Member Functions inherited from itk::Object
 Object ()
 
bool PrintObservers (std::ostream &os, Indent indent) const
 
virtual void SetTimeStamp (const TimeStamp &time)
 
virtual ~Object ()
 
- Protected Member Functions inherited from itk::LightObject
virtual LightObject::Pointer InternalClone () const
 
 LightObject ()
 
virtual void PrintHeader (std::ostream &os, Indent indent) const
 
virtual void PrintTrailer (std::ostream &os, Indent indent) const
 
virtual ~LightObject ()
 

Private Member Functions

 DemonsRegistrationFilter (const Self &)
 
void operator= (const Self &)
 

Private Attributes

bool m_UseMovingImageGradient
 

Additional Inherited Members

- Static Public Attributes inherited from itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >
static const unsigned int ImageDimension = Superclass::ImageDimension
 
- Static Public Attributes inherited from itk::DenseFiniteDifferenceImageFilter< TDisplacementField, TDisplacementField >
static const unsigned int ImageDimension
 
- Static Public Attributes inherited from itk::FiniteDifferenceImageFilter< TDisplacementField, TDisplacementField >
static const unsigned int ImageDimension
 
- Static Public Attributes inherited from itk::InPlaceImageFilter< TDisplacementField, TDisplacementField >
static const unsigned int InputImageDimension
 
static const unsigned int OutputImageDimension
 
- Static Public Attributes inherited from itk::ImageToImageFilter< TDisplacementField, TDisplacementField >
static const unsigned int InputImageDimension
 
static const unsigned int OutputImageDimension
 
- Static Public Attributes inherited from itk::ImageSource< TDisplacementField >
static const unsigned int OutputImageDimension
 
- Protected Types inherited from itk::DenseFiniteDifferenceImageFilter< TDisplacementField, TDisplacementField >
typedef
UpdateBufferType::RegionType 
ThreadRegionType
 
- Protected Types inherited from itk::ImageToImageFilter< TDisplacementField, TDisplacementField >
typedef
ImageToImageFilterDetail::ImageRegionCopier
< itkGetStaticConstMacro(OutputImageDimension),
itkGetStaticConstMacro(InputImageDimension) > 
InputToOutputRegionCopierType
 
typedef
ImageToImageFilterDetail::ImageRegionCopier
< itkGetStaticConstMacro(InputImageDimension),
itkGetStaticConstMacro(OutputImageDimension) > 
OutputToInputRegionCopierType
 
- Protected Types inherited from itk::LightObject
typedef int InternalReferenceCountType
 
- Static Protected Member Functions inherited from itk::ImageSource< TDisplacementField >
static const
ImageRegionSplitterBase
GetGlobalDefaultSplitter ()
 
static ITK_THREAD_RETURN_TYPE ThreaderCallback (void *arg)
 
- Protected Attributes inherited from itk::FiniteDifferenceImageFilter< TDisplacementField, TDisplacementField >
IdentifierType m_ElapsedIterations
 
bool m_IsInitialized
 
bool m_ManualReinitialization
 
double m_MaximumRMSError
 
IdentifierType m_NumberOfIterations
 
double m_RMSChange
 
- Protected Attributes inherited from itk::ProcessObject
TimeStamp m_OutputInformationMTime
 
bool m_Updating
 
- Protected Attributes inherited from itk::LightObject
InternalReferenceCountType m_ReferenceCount
 
SimpleFastMutexLock m_ReferenceCountLock
 

Member Typedef Documentation

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
typedef SmartPointer< const Self > itk::DemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::ConstPointer

Definition at line 72 of file itkDemonsRegistrationFilter.h.

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
typedef DemonsRegistrationFunction< FixedImageType, MovingImageType, DisplacementFieldType > itk::DemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::DemonsRegistrationFunctionType

DemonsRegistrationFilterFunction type.

Definition at line 107 of file itkDemonsRegistrationFilter.h.

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
typedef Superclass::DisplacementFieldPointer itk::DemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::DisplacementFieldPointer

Definition at line 94 of file itkDemonsRegistrationFilter.h.

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
typedef Superclass::DisplacementFieldType itk::DemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::DisplacementFieldType

displacement field type.

Definition at line 93 of file itkDemonsRegistrationFilter.h.

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
typedef Superclass::FiniteDifferenceFunctionType itk::DemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::FiniteDifferenceFunctionType

FiniteDifferenceFunction type.

Definition at line 103 of file itkDemonsRegistrationFilter.h.

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
typedef Superclass::FixedImagePointer itk::DemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::FixedImagePointer

Definition at line 86 of file itkDemonsRegistrationFilter.h.

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
typedef Superclass::FixedImageType itk::DemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::FixedImageType

FixedImage image type.

Definition at line 85 of file itkDemonsRegistrationFilter.h.

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
typedef Superclass::MovingImagePointer itk::DemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::MovingImagePointer

Definition at line 90 of file itkDemonsRegistrationFilter.h.

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
typedef Superclass::MovingImageType itk::DemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::MovingImageType

MovingImage image type.

Definition at line 89 of file itkDemonsRegistrationFilter.h.

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
typedef SmartPointer< Self > itk::DemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::Pointer

Definition at line 71 of file itkDemonsRegistrationFilter.h.

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
typedef DemonsRegistrationFilter itk::DemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::Self

Standard class typedefs.

Definition at line 69 of file itkDemonsRegistrationFilter.h.

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
typedef PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField > itk::DemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::Superclass

Definition at line 70 of file itkDemonsRegistrationFilter.h.

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
typedef Superclass::TimeStepType itk::DemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::TimeStepType

Inherit types from superclass.

Definition at line 79 of file itkDemonsRegistrationFilter.h.

Constructor & Destructor Documentation

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
itk::DemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::DemonsRegistrationFilter ( )
protected
template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
itk::DemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::DemonsRegistrationFilter ( const Self )
private

Member Function Documentation

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
virtual void itk::DemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::ApplyUpdate ( const TimeStepType dt)
protectedvirtual
template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
virtual::itk::LightObject::Pointer itk::DemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::CreateAnother ( void  ) const
virtual

Create an object from an instance, potentially deferring to a factory. This method allows you to create an instance of an object that is exactly the same type as the referring object. This is useful in cases where an object has been cast back to a base class.

Reimplemented from itk::Object.

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
virtual double itk::DemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::GetIntensityDifferenceThreshold ( ) const
virtual
template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
virtual double itk::DemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::GetMetric ( ) const
virtual

Get the metric value. The metric value is the mean square difference in intensity between the fixed image and transforming moving image computed over the the overlapping region between the two images. This is value is only available for the previous iteration and NOT the current iteration.

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
virtual const char* itk::DemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::GetNameOfClass ( ) const
virtual

Run-time type information (and related methods).

Reimplemented from itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >.

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
virtual bool itk::DemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::GetUseMovingImageGradient ( ) const
virtual

Switch between using the fixed image and moving image gradient for computing the displacement field updates.

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
virtual void itk::DemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::InitializeIteration ( )
protectedvirtual

Initialize the state of filter and equation before each iteration.

Reimplemented from itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >.

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
static Pointer itk::DemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::New ( )
static

Method for creation through the object factory.

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
void itk::DemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::operator= ( const Self )
private
template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
void itk::DemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::PrintSelf ( std::ostream &  os,
Indent  indent 
) const
protectedvirtual

Methods invoked by Print() to print information about the object including superclasses. Typically not called by the user (use Print() instead) but used in the hierarchical print process to combine the output of several classes.

Reimplemented from itk::InPlaceImageFilter< TDisplacementField, TDisplacementField >.

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
virtual void itk::DemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::SetIntensityDifferenceThreshold ( double  )
virtual

Set/Get the threshold below which the absolute difference of intensity yields a match. When the intensities match between a moving and fixed image pixel, the update vector (for that iteration) will be the zero vector. Default is 0.001.

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
virtual void itk::DemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::SetUseMovingImageGradient ( bool  _arg)
virtual

Switch between using the fixed image and moving image gradient for computing the displacement field updates.

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
virtual void itk::DemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::UseMovingImageGradientOff ( )
virtual

Switch between using the fixed image and moving image gradient for computing the displacement field updates.

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
virtual void itk::DemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::UseMovingImageGradientOn ( )
virtual

Switch between using the fixed image and moving image gradient for computing the displacement field updates.

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
virtual void itk::DemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::VerifyInputInformation ( )
inlineprotectedvirtual

Override VeriyInputInformation() since this filter's inputs do not need to occoupy the same physical space.

See Also
ProcessObject::VerifyInputInformation

Reimplemented from itk::ImageToImageFilter< TDisplacementField, TDisplacementField >.

Definition at line 147 of file itkDemonsRegistrationFilter.h.

Member Data Documentation

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >
bool itk::DemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::m_UseMovingImageGradient
private

Definition at line 153 of file itkDemonsRegistrationFilter.h.


The documentation for this class was generated from the following file: