itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage > Class Template Reference

#include <itkLabelGeometryImageFilter.h>

Inheritance diagram for itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >:

Collaboration diagram for itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >:

Detailed Description

template<typename TLabelImage, typename TIntensityImage = TLabelImage>
class itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >

Given a label map and an optional intensity image, compute geometric features.

This filter enables the measurement of geometric features of all objects in a labeled ND volume. This labeled volume can represent, for instance, a medical image segmented into different anatomical structures or a microscope image segmented into individual cells. This filter is closely related to the itkLabelStatisticsImageFilter, which measures statistics of image regions defined by a labeled mask such as min, max, and mean intensity, intensity standard deviation, and bounding boxes. This filter, however, measures the geometry of the labeled regions themselves.

It calculates features similar to the regionprops command of Matlab. The set of measurements that it enables include: volume, centroid, eigenvalues, eigenvectors, axes lenghts, eccentricity, elongation, orientation, bounding box, oriented bounding box, and rotation matrix. These features are based solely on the labeled mask itself. It also calculates integrated intensity and weighted centroid, which are measured on an intensity image under the labeled mask. These features represent the set of currently calculated features, but the framework of the filter is designed so that it can be easily expanded to measure a wide variety of other features.

Authors

Dirk Padfield and James Miller.

This work is part of the National Alliance for Medical Image Computing (NAMIC), funded by the National Institutes of Health through the NIH Roadmap for Medical Research, Grant U54 EB005149. Information on the National Centers for Biomedical Computing can be obtained from http://commonfund.nih.gov/bioinformatics.

This filter was contributed in the Insight Journal paper: "A Label Geometry Image Filter for Multiple Object Measurement" by Padfield D., Miller J http://www.insight-journal.org/browse/publication/301 http://hdl.handle.net/1926/1493

Wiki Examples:

• All Examples
• Get geometric properties of labeled regions in an image

Definition at line 78 of file itkLabelGeometryImageFilter.h.

Classes
class	LabelGeometry

Public Types
typedef itk::FixedArray < RealType, itkGetStaticConstMacro(ImageDimension) >	AxesLengthType
typedef std::vector < LabelPointType >	BoundingBoxVerticesType
typedef SmartPointer< const Self >	ConstPointer
typedef DataObject::Pointer	DataObjectPointer
typedef itk::FixedArray < typename LabelIndexType::IndexValueType, itkGetStaticConstMacro(ImageDimension) >	IndexArrayType
typedef TIntensityImage::IndexType	IndexType
typedef TIntensityImage::Pointer	InputImagePointer
typedef TIntensityImage	IntensityImageType
typedef TLabelImage::Pointer	LabelImagePointer
typedef TLabelImage	LabelImageType
typedef TLabelImage::IndexType	LabelIndexType
typedef std::vector < LabelIndexType >	LabelIndicesType
typedef TLabelImage::PixelType	LabelPixelType
typedef TLabelImage::PointType	LabelPointType
typedef TLabelImage::RegionType	LabelRegionType
typedef TLabelImage::SizeType	LabelSizeType
typedef std::vector < LabelPixelType >	LabelsType
typedef itksys::hash_map < LabelPixelType, LabelGeometry > ::const_iterator	MapConstIterator
typedef itksys::hash_map < LabelPixelType, LabelGeometry >::iterator	MapIterator
typedef itksys::hash_map < LabelPixelType, LabelGeometry >	MapType
typedef vnl_matrix< double >	MatrixType
typedef TIntensityImage::PixelType	PixelType
typedef SmartPointer< Self >	Pointer
typedef SimpleDataObjectDecorator < RealType >	RealObjectType
typedef NumericTraits < PixelType >::RealType	RealType
typedef TIntensityImage::RegionType	RegionType
typedef LabelGeometryImageFilter	Self
typedef TIntensityImage::SizeType	SizeType
typedef ImageToImageFilter < TLabelImage, TIntensityImage >	Superclass
typedef std::vector< double >	VectorType
typedef itk::FixedArray < typename LabelIndexType::IndexValueType, itkGetStaticConstMacro(ImageDimension)*2 >	BoundingBoxType
typedef itk::FixedArray< float, itkGetStaticConstMacro(ImageDimension)*2 >	BoundingBoxFloatType
Public Types inherited from itk::ImageToImageFilter< TLabelImage, TIntensityImage >
typedef SmartPointer< const Self >	ConstPointer
typedef InputImageType::ConstPointer	InputImageConstPointer
typedef InputImageType::PixelType	InputImagePixelType
typedef InputImageType::Pointer	InputImagePointer
typedef InputImageType::RegionType	InputImageRegionType
typedef TLabelImage	InputImageType
typedef Superclass::OutputImagePixelType	OutputImagePixelType
typedef Superclass::OutputImageRegionType	OutputImageRegionType
typedef SmartPointer< Self >	Pointer
typedef ImageToImageFilter	Self
typedef ImageSource < TIntensityImage >	Superclass
Public Types inherited from itk::ImageSource< TIntensityImage >
typedef SmartPointer< const Self >	ConstPointer
typedef Superclass::DataObjectIdentifierType	DataObjectIdentifierType
typedef DataObject::Pointer	DataObjectPointer
typedef Superclass::DataObjectPointerArraySizeType	DataObjectPointerArraySizeType
typedef OutputImageType::PixelType	OutputImagePixelType
typedef OutputImageType::Pointer	OutputImagePointer
typedef OutputImageType::RegionType	OutputImageRegionType
typedef TIntensityImage	OutputImageType
typedef SmartPointer< Self >	Pointer
typedef ImageSource	Self
typedef ProcessObject	Superclass
Public Types inherited from itk::ProcessObject
typedef SmartPointer< const Self >	ConstPointer
typedef DataObject::DataObjectIdentifierType	DataObjectIdentifierType
typedef DataObject::Pointer	DataObjectPointer
typedef std::vector < DataObjectPointer >	DataObjectPointerArray
typedef DataObjectPointerArray::size_type	DataObjectPointerArraySizeType
typedef std::vector < DataObjectIdentifierType >	NameArray
typedef SmartPointer< Self >	Pointer
typedef ProcessObject	Self
typedef Object	Superclass
Public Types inherited from itk::Object
typedef SmartPointer< const Self >	ConstPointer
typedef SmartPointer< Self >	Pointer
typedef Object	Self
typedef LightObject	Superclass
Public Types inherited from itk::LightObject
typedef SmartPointer< const Self >	ConstPointer
typedef SmartPointer< Self >	Pointer
typedef LightObject	Self

Public Member Functions
virtual void	CalculateOrientedBoundingBoxOff ()
virtual void	CalculateOrientedBoundingBoxOn ()
virtual void	CalculateOrientedIntensityRegionsOff ()
virtual void	CalculateOrientedIntensityRegionsOn ()
virtual void	CalculateOrientedLabelRegionsOff ()
virtual void	CalculateOrientedLabelRegionsOn ()
virtual void	CalculatePixelIndicesOff ()
virtual void	CalculatePixelIndicesOn ()
virtual ::itk::LightObject::Pointer	CreateAnother (void) const
AxesLengthType	GetAxesLength (LabelPixelType label) const
BoundingBoxType	GetBoundingBox (LabelPixelType label) const
LabelSizeType	GetBoundingBoxSize (LabelPixelType label) const
RealType	GetBoundingBoxVolume (LabelPixelType label) const
virtual bool	GetCalculateOrientedBoundingBox ()
virtual bool	GetCalculateOrientedIntensityRegions ()
virtual bool	GetCalculateOrientedLabelRegions ()
virtual bool	GetCalculatePixelIndices ()
LabelPointType	GetCentroid (LabelPixelType label) const
RealType	GetEccentricity (LabelPixelType label) const
VectorType	GetEigenvalues (LabelPixelType label) const
MatrixType	GetEigenvectors (LabelPixelType label) const
RealType	GetElongation (LabelPixelType label) const
RealType	GetIntegratedIntensity (LabelPixelType label) const
const TIntensityImage *	GetIntensityInput () const
std::vector< LabelPixelType >	GetLabels () const
RealType	GetMajorAxisLength (LabelPixelType label) const
RealType	GetMinorAxisLength (LabelPixelType label) const
virtual const char *	GetNameOfClass () const
SizeValueType	GetNumberOfLabels () const
SizeValueType	GetNumberOfObjects () const
RealType	GetOrientation (LabelPixelType label) const
LabelPointType	GetOrientedBoundingBoxOrigin (LabelPixelType label) const
LabelPointType	GetOrientedBoundingBoxSize (LabelPixelType label) const
BoundingBoxVerticesType	GetOrientedBoundingBoxVertices (LabelPixelType label) const
RealType	GetOrientedBoundingBoxVolume (LabelPixelType label) const
TIntensityImage *	GetOrientedIntensityImage (LabelPixelType label) const
TLabelImage *	GetOrientedLabelImage (LabelPixelType label) const
LabelIndicesType	GetPixelIndices (LabelPixelType label) const
RegionType	GetRegion (LabelPixelType label) const
MatrixType	GetRotationMatrix (LabelPixelType label) const
SizeValueType	GetVolume (LabelPixelType label) const
LabelPointType	GetWeightedCentroid (LabelPixelType label) const
bool	HasLabel (LabelPixelType label) const
void	SetCalculateOrientedBoundingBox (const bool value)
void	SetCalculateOrientedIntensityRegions (const bool value)
void	SetCalculateOrientedLabelRegions (const bool value)
void	SetCalculatePixelIndices (const bool value)
void	SetIntensityInput (const TIntensityImage *input)
	typedef (Concept::HasNumericTraits< PixelType >) InputHasNumericTraitsCheck
Public Member Functions inherited from itk::ImageToImageFilter< TLabelImage, TIntensityImage >
const InputImageType *	GetInput (void) const
const InputImageType *	GetInput (unsigned int idx) const
virtual void	PopBackInput ()
virtual void	PopFrontInput ()
virtual void	PushBackInput (const InputImageType *image)
virtual void	PushFrontInput (const InputImageType *image)
virtual void	SetInput (const InputImageType *image)
virtual void	SetInput (unsigned int, const TLabelImage *image)
virtual void	SetCoordinateTolerance (double _arg)
virtual double	GetCoordinateTolerance () const
virtual void	SetDirectionTolerance (double _arg)
virtual double	GetDirectionTolerance () const
Public Member Functions inherited from itk::ImageSource< TIntensityImage >
OutputImageType *	GetOutput (unsigned int idx)
virtual void	GraftNthOutput (unsigned int idx, DataObject *output)
virtual void	GraftOutput (DataObject *output)
virtual void	GraftOutput (const DataObjectIdentifierType &key, DataObject *output)
OutputImageType *	GetOutput (void)
const OutputImageType *	GetOutput (void) const
virtual ProcessObject::DataObjectPointer	MakeOutput (ProcessObject::DataObjectPointerArraySizeType idx) ITK_OVERRIDE
Public Member Functions inherited from itk::ProcessObject
virtual void	AbortGenerateDataOff ()
virtual void	AbortGenerateDataOn ()
virtual void	EnlargeOutputRequestedRegion (DataObject *)
virtual const bool &	GetAbortGenerateData () const
NameArray	GetInputNames () const
MultiThreader *	GetMultiThreader () const
DataObjectPointerArraySizeType	GetNumberOfIndexedInputs () const
DataObjectPointerArraySizeType	GetNumberOfInputs () const
DataObjectPointerArraySizeType	GetNumberOfOutputs () const
virtual DataObjectPointerArraySizeType	GetNumberOfValidRequiredInputs () const
NameArray	GetOutputNames () const
virtual const float &	GetProgress () const
NameArray	GetRequiredInputNames () const
bool	HasInput (const DataObjectIdentifierType &key) const
bool	HasOutput (const DataObjectIdentifierType &key) const
virtual DataObjectPointer	MakeOutput (const DataObjectIdentifierType &)
virtual void	PrepareOutputs ()
virtual void	PropagateRequestedRegion (DataObject *output)
virtual void	ResetPipeline ()
virtual void	SetAbortGenerateData (bool _arg)
virtual void	Update ()
virtual void	UpdateLargestPossibleRegion ()
virtual void	UpdateOutputData (DataObject *output)
virtual void	UpdateOutputInformation ()
void	UpdateProgress (float progress)
DataObjectPointerArray	GetInputs ()
DataObjectPointerArray	GetOutputs ()
DataObjectPointerArray	GetIndexedInputs ()
DataObjectPointerArray	GetIndexedOutputs ()
DataObjectPointerArraySizeType	GetNumberOfIndexedOutputs () const
void	SetProgress (float progress)
virtual void	SetReleaseDataFlag (bool flag)
virtual bool	GetReleaseDataFlag () const
void	ReleaseDataFlagOn ()
void	ReleaseDataFlagOff ()
virtual void	SetReleaseDataBeforeUpdateFlag (bool _arg)
virtual const bool &	GetReleaseDataBeforeUpdateFlag () const
virtual void	ReleaseDataBeforeUpdateFlagOn ()
virtual void	ReleaseDataBeforeUpdateFlagOff ()
virtual void	SetNumberOfThreads (ThreadIdType _arg)
virtual const ThreadIdType &	GetNumberOfThreads () const
Public Member Functions inherited from itk::Object
unsigned long	AddObserver (const EventObject &event, Command *)
unsigned long	AddObserver (const EventObject &event, Command *) const
virtual void	DebugOff () const
virtual void	DebugOn () const
Command *	GetCommand (unsigned long tag)
bool	GetDebug () const
MetaDataDictionary &	GetMetaDataDictionary (void)
const MetaDataDictionary &	GetMetaDataDictionary (void) const
virtual ModifiedTimeType	GetMTime () const
virtual const TimeStamp &	GetTimeStamp () const
bool	HasObserver (const EventObject &event) const
void	InvokeEvent (const EventObject &)
void	InvokeEvent (const EventObject &) const
virtual void	Modified () const
virtual void	Register () const ITK_OVERRIDE
void	RemoveAllObservers ()
void	RemoveObserver (unsigned long tag)
void	SetDebug (bool debugFlag) const
void	SetMetaDataDictionary (const MetaDataDictionary &rhs)
virtual void	SetReferenceCount (int) ITK_OVERRIDE
virtual void	UnRegister () const ITK_OVERRIDE
virtual void	SetObjectName (std::string _arg)
virtual const std::string &	GetObjectName () const
Public Member Functions inherited from itk::LightObject
virtual void	Delete ()
virtual int	GetReferenceCount () const
	itkCloneMacro (Self)
void	Print (std::ostream &os, Indent indent=0) const

Static Public Member Functions
static Pointer	New ()
Static Public Member Functions inherited from itk::Object
static bool	GetGlobalWarningDisplay ()
static void	GlobalWarningDisplayOff ()
static void	GlobalWarningDisplayOn ()
static Pointer	New ()
static void	SetGlobalWarningDisplay (bool flag)
Static Public Member Functions inherited from itk::LightObject
static void	BreakOnError ()
static Pointer	New ()

Static Public Attributes
static const unsigned int	ImageDimension = TLabelImage::ImageDimension
Static Public Attributes inherited from itk::ImageToImageFilter< TLabelImage, TIntensityImage >
static const unsigned int	InputImageDimension
static const unsigned int	OutputImageDimension
Static Public Attributes inherited from itk::ImageSource< TIntensityImage >
static const unsigned int	OutputImageDimension

Protected Member Functions
void	GenerateData ()
	LabelGeometryImageFilter ()
void	PrintSelf (std::ostream &os, Indent indent) const
	~LabelGeometryImageFilter ()
Protected Member Functions inherited from itk::ImageToImageFilter< TLabelImage, TIntensityImage >
virtual void	CallCopyInputRegionToOutputRegion (OutputImageRegionType &destRegion, const InputImageRegionType &srcRegion)
virtual void	CallCopyOutputRegionToInputRegion (InputImageRegionType &destRegion, const OutputImageRegionType &srcRegion)
virtual void	GenerateInputRequestedRegion ()
	ImageToImageFilter ()
virtual void	VerifyInputInformation ()
	~ImageToImageFilter ()
void	PushBackInput (const DataObject *input)
void	PushFrontInput (const DataObject *input)
Protected Member Functions inherited from itk::ImageSource< TIntensityImage >
virtual void	AfterThreadedGenerateData ()
virtual void	AllocateOutputs ()
virtual void	BeforeThreadedGenerateData ()
virtual const ImageRegionSplitterBase *	GetImageRegionSplitter (void) const
	ImageSource ()
virtual unsigned int	SplitRequestedRegion (unsigned int i, unsigned int pieces, OutputImageRegionType &splitRegion)
virtual void	ThreadedGenerateData (const OutputImageRegionType &outputRegionForThread, ThreadIdType threadId)
virtual	~ImageSource ()
Protected Member Functions inherited from itk::ProcessObject
virtual void	AddInput (DataObject *input)
virtual void	AddOutput (DataObject *output)
virtual void	CacheInputReleaseDataFlags ()
virtual void	GenerateOutputInformation ()
virtual void	GenerateOutputRequestedRegion (DataObject *output)
virtual const DataObjectPointerArraySizeType &	GetNumberOfRequiredOutputs () const
bool	IsIndexedInputName (const DataObjectIdentifierType &) const
bool	IsIndexedOutputName (const DataObjectIdentifierType &) const
	itkLegacyMacro (virtual void RemoveOutput(DataObject *output))
	itkLegacyMacro (void SetNumberOfOutputs(DataObjectPointerArraySizeType num))
	itkLegacyMacro (virtual void RemoveInput(DataObject *input))
	itkLegacyMacro (void SetNumberOfInputs(DataObjectPointerArraySizeType num))
DataObjectPointerArraySizeType	MakeIndexFromInputName (const DataObjectIdentifierType &name) const
DataObjectPointerArraySizeType	MakeIndexFromOutputName (const DataObjectIdentifierType &name) const
DataObjectIdentifierType	MakeNameFromInputIndex (DataObjectPointerArraySizeType idx) const
DataObjectIdentifierType	MakeNameFromOutputIndex (DataObjectPointerArraySizeType idx) const
	ProcessObject ()
virtual void	PropagateResetPipeline ()
virtual void	ReleaseInputs ()
virtual void	RemoveInput (const DataObjectIdentifierType &key)
virtual void	RemoveInput (DataObjectPointerArraySizeType)
virtual void	RemoveOutput (const DataObjectIdentifierType &key)
virtual void	RemoveOutput (DataObjectPointerArraySizeType idx)
virtual void	RestoreInputReleaseDataFlags ()
virtual void	SetInput (const DataObjectIdentifierType &key, DataObject *input)
virtual void	SetNthInput (DataObjectPointerArraySizeType num, DataObject *input)
virtual void	SetNthOutput (DataObjectPointerArraySizeType num, DataObject *output)
void	SetNumberOfIndexedInputs (DataObjectPointerArraySizeType num)
void	SetNumberOfIndexedOutputs (DataObjectPointerArraySizeType num)
virtual void	SetNumberOfRequiredOutputs (DataObjectPointerArraySizeType _arg)
virtual void	SetOutput (const DataObjectIdentifierType &key, DataObject *output)
virtual void	SetPrimaryInput (DataObject *input)
virtual void	SetPrimaryOutput (DataObject *output)
virtual void	VerifyPreconditions ()
	~ProcessObject ()
DataObject *	GetInput (const DataObjectIdentifierType &key)
const DataObject *	GetInput (const DataObjectIdentifierType &key) const
DataObject *	GetInput (DataObjectPointerArraySizeType idx)
const DataObject *	GetInput (DataObjectPointerArraySizeType idx) const
DataObject *	GetPrimaryInput ()
const DataObject *	GetPrimaryInput () const
virtual void	SetPrimaryInputName (const DataObjectIdentifierType &key)
virtual const char *	GetPrimaryInputName (void) const
virtual void	SetNumberOfRequiredInputs (DataObjectPointerArraySizeType)
virtual const DataObjectPointerArraySizeType &	GetNumberOfRequiredInputs () const
bool	AddRequiredInputName (const DataObjectIdentifierType &)
bool	AddRequiredInputName (const DataObjectIdentifierType &, DataObjectPointerArraySizeType idx)
bool	RemoveRequiredInputName (const DataObjectIdentifierType &)
bool	IsRequiredInputName (const DataObjectIdentifierType &) const
void	SetRequiredInputNames (const NameArray &)
DataObject *	GetOutput (const DataObjectIdentifierType &key)
const DataObject *	GetOutput (const DataObjectIdentifierType &key) const
virtual void	SetPrimaryOutputName (const DataObjectIdentifierType &key)
virtual const char *	GetPrimaryOutputName (void) const
DataObject *	GetOutput (DataObjectPointerArraySizeType idx)
const DataObject *	GetOutput (DataObjectPointerArraySizeType idx) const
DataObject *	GetPrimaryOutput ()
const DataObject *	GetPrimaryOutput () const
Protected Member Functions inherited from itk::Object
	Object ()
bool	PrintObservers (std::ostream &os, Indent indent) const
virtual void	SetTimeStamp (const TimeStamp &time)
virtual	~Object ()
Protected Member Functions inherited from itk::LightObject
virtual LightObject::Pointer	InternalClone () const
	LightObject ()
virtual void	PrintHeader (std::ostream &os, Indent indent) const
virtual void	PrintTrailer (std::ostream &os, Indent indent) const
virtual	~LightObject ()

Private Member Functions
bool	CalculateOrientedBoundingBoxVertices (vnl_symmetric_eigensystem< double > eig, LabelGeometry &m_LabelGeometry)
	LabelGeometryImageFilter (const Self &)
void	operator= (const Self &)

Private Attributes
LabelsType	m_AllLabels
bool	m_CalculateOrientedBoundingBox
bool	m_CalculateOrientedIntensityRegions
bool	m_CalculateOrientedLabelRegions
bool	m_CalculatePixelIndices
LabelGeometry	m_LabelGeometry
MapType	m_LabelGeometryMapper
SimpleFastMutexLock	m_Mutex

Additional Inherited Members
Protected Types inherited from itk::ImageToImageFilter< TLabelImage, TIntensityImage >
typedef ImageToImageFilterDetail::ImageRegionCopier < itkGetStaticConstMacro(OutputImageDimension), itkGetStaticConstMacro(InputImageDimension) >	InputToOutputRegionCopierType
typedef ImageToImageFilterDetail::ImageRegionCopier < itkGetStaticConstMacro(InputImageDimension), itkGetStaticConstMacro(OutputImageDimension) >	OutputToInputRegionCopierType
Protected Types inherited from itk::LightObject
typedef int	InternalReferenceCountType
Static Protected Member Functions inherited from itk::ImageSource< TIntensityImage >
static const ImageRegionSplitterBase *	GetGlobalDefaultSplitter ()
static ITK_THREAD_RETURN_TYPE	ThreaderCallback (void *arg)
Protected Attributes inherited from itk::ProcessObject
TimeStamp	m_OutputInformationMTime
bool	m_Updating
Protected Attributes inherited from itk::LightObject
InternalReferenceCountType	m_ReferenceCount
SimpleFastMutexLock	m_ReferenceCountLock

Member Typedef Documentation

template<typename TLabelImage, typename TIntensityImage = TLabelImage>

typedef itk::FixedArray< RealType, itkGetStaticConstMacro(ImageDimension) > itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::AxesLengthType

Axes Length-related typedefs

Definition at line 137 of file itkLabelGeometryImageFilter.h.

template<typename TLabelImage, typename TIntensityImage = TLabelImage>

typedef itk::FixedArray< float, itkGetStaticConstMacro(ImageDimension) *2 > itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::BoundingBoxFloatType

Bounding Box-related typedefs

Definition at line 128 of file itkLabelGeometryImageFilter.h.

template<typename TLabelImage, typename TIntensityImage = TLabelImage>

typedef itk::FixedArray< typename LabelIndexType::IndexValueType, itkGetStaticConstMacro(ImageDimension) *2 > itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::BoundingBoxType

Bounding Box-related typedefs

Definition at line 126 of file itkLabelGeometryImageFilter.h.

template<typename TLabelImage, typename TIntensityImage = TLabelImage>

typedef std::vector< LabelPointType > itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::BoundingBoxVerticesType

Definition at line 134 of file itkLabelGeometryImageFilter.h.

template<typename TLabelImage, typename TIntensityImage = TLabelImage>

typedef SmartPointer< const Self > itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::ConstPointer

Definition at line 86 of file itkLabelGeometryImageFilter.h.

template<typename TLabelImage, typename TIntensityImage = TLabelImage>

typedef DataObject::Pointer itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::DataObjectPointer

Smart Pointer type to a DataObject.

Definition at line 119 of file itkLabelGeometryImageFilter.h.

template<typename TLabelImage, typename TIntensityImage = TLabelImage>

typedef itk::FixedArray< typename LabelIndexType::IndexValueType, itkGetStaticConstMacro(ImageDimension) > itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::IndexArrayType

Index array typedefs

Definition at line 141 of file itkLabelGeometryImageFilter.h.

template<typename TLabelImage, typename TIntensityImage = TLabelImage>

typedef TIntensityImage::IndexType itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::IndexType

Definition at line 99 of file itkLabelGeometryImageFilter.h.

template<typename TLabelImage, typename TIntensityImage = TLabelImage>

typedef TIntensityImage::Pointer itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::InputImagePointer

Definition at line 96 of file itkLabelGeometryImageFilter.h.

template<typename TLabelImage, typename TIntensityImage = TLabelImage>

typedef TIntensityImage itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::IntensityImageType

Image related typedefs.

Definition at line 92 of file itkLabelGeometryImageFilter.h.

template<typename TLabelImage, typename TIntensityImage = TLabelImage>

typedef TLabelImage::Pointer itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::LabelImagePointer

Definition at line 104 of file itkLabelGeometryImageFilter.h.

template<typename TLabelImage, typename TIntensityImage = TLabelImage>

typedef TLabelImage itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::LabelImageType

Label image related typedefs.

Definition at line 103 of file itkLabelGeometryImageFilter.h.

template<typename TLabelImage, typename TIntensityImage = TLabelImage>

typedef TLabelImage::IndexType itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::LabelIndexType

Definition at line 107 of file itkLabelGeometryImageFilter.h.

template<typename TLabelImage, typename TIntensityImage = TLabelImage>

typedef std::vector< LabelIndexType > itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::LabelIndicesType

vector of indices

Definition at line 147 of file itkLabelGeometryImageFilter.h.

template<typename TLabelImage, typename TIntensityImage = TLabelImage>

typedef TLabelImage::PixelType itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::LabelPixelType

Definition at line 108 of file itkLabelGeometryImageFilter.h.

template<typename TLabelImage, typename TIntensityImage = TLabelImage>

typedef TLabelImage::PointType itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::LabelPointType

Definition at line 109 of file itkLabelGeometryImageFilter.h.

template<typename TLabelImage, typename TIntensityImage = TLabelImage>

typedef TLabelImage::RegionType itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::LabelRegionType

Definition at line 105 of file itkLabelGeometryImageFilter.h.

template<typename TLabelImage, typename TIntensityImage = TLabelImage>

typedef TLabelImage::SizeType itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::LabelSizeType

Definition at line 106 of file itkLabelGeometryImageFilter.h.

template<typename TLabelImage, typename TIntensityImage = TLabelImage>

typedef std::vector< LabelPixelType > itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::LabelsType

vector of labels

Definition at line 144 of file itkLabelGeometryImageFilter.h.

template<typename TLabelImage, typename TIntensityImage = TLabelImage>

typedef itksys::hash_map< LabelPixelType, LabelGeometry >::const_iterator itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::MapConstIterator

Definition at line 252 of file itkLabelGeometryImageFilter.h.

template<typename TLabelImage, typename TIntensityImage = TLabelImage>

typedef itksys::hash_map< LabelPixelType, LabelGeometry >::iterator itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::MapIterator

Definition at line 251 of file itkLabelGeometryImageFilter.h.

template<typename TLabelImage, typename TIntensityImage = TLabelImage>

typedef itksys::hash_map< LabelPixelType, LabelGeometry > itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::MapType

Type of the map used to store data per label

Definition at line 250 of file itkLabelGeometryImageFilter.h.

template<typename TLabelImage, typename TIntensityImage = TLabelImage>

typedef vnl_matrix< double > itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::MatrixType

Matrix type

Definition at line 153 of file itkLabelGeometryImageFilter.h.

template<typename TLabelImage, typename TIntensityImage = TLabelImage>

typedef TIntensityImage::PixelType itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::PixelType

Definition at line 100 of file itkLabelGeometryImageFilter.h.

template<typename TLabelImage, typename TIntensityImage = TLabelImage>

typedef SmartPointer< Self > itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::Pointer

Definition at line 85 of file itkLabelGeometryImageFilter.h.

template<typename TLabelImage, typename TIntensityImage = TLabelImage>

typedef SimpleDataObjectDecorator< RealType > itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::RealObjectType

Type of DataObjects used for scalar outputs

Definition at line 122 of file itkLabelGeometryImageFilter.h.

template<typename TLabelImage, typename TIntensityImage = TLabelImage>

typedef NumericTraits< PixelType >::RealType itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::RealType

Type to use for computations.

Definition at line 116 of file itkLabelGeometryImageFilter.h.

template<typename TLabelImage, typename TIntensityImage = TLabelImage>

typedef TIntensityImage::RegionType itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::RegionType

Definition at line 97 of file itkLabelGeometryImageFilter.h.

template<typename TLabelImage, typename TIntensityImage = TLabelImage>

typedef LabelGeometryImageFilter itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::Self

Standard Self typedef

Definition at line 83 of file itkLabelGeometryImageFilter.h.

template<typename TLabelImage, typename TIntensityImage = TLabelImage>

typedef TIntensityImage::SizeType itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::SizeType

Definition at line 98 of file itkLabelGeometryImageFilter.h.

template<typename TLabelImage, typename TIntensityImage = TLabelImage>

typedef ImageToImageFilter< TLabelImage, TIntensityImage > itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::Superclass

Definition at line 84 of file itkLabelGeometryImageFilter.h.

template<typename TLabelImage, typename TIntensityImage = TLabelImage>

typedef std::vector< double > itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::VectorType

Vector type

Definition at line 150 of file itkLabelGeometryImageFilter.h.

Constructor & Destructor Documentation

template<typename TLabelImage, typename TIntensityImage = TLabelImage>

itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::LabelGeometryImageFilter ( )

protected

template<typename TLabelImage, typename TIntensityImage = TLabelImage>

itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::~LabelGeometryImageFilter ( )

inlineprotected

Definition at line 470 of file itkLabelGeometryImageFilter.h.

template<typename TLabelImage, typename TIntensityImage = TLabelImage>

itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::LabelGeometryImageFilter ( const Self &  )

private

Member Function Documentation

template<typename TLabelImage, typename TIntensityImage = TLabelImage>

virtual void itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::CalculateOrientedBoundingBoxOff ( )

virtual

template<typename TLabelImage, typename TIntensityImage = TLabelImage>

virtual void itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::CalculateOrientedBoundingBoxOn ( )

virtual

template<typename TLabelImage, typename TIntensityImage = TLabelImage>

bool itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::CalculateOrientedBoundingBoxVertices ( vnl_symmetric_eigensystem< double >  eig, LabelGeometry &  m_LabelGeometry  )

private

template<typename TLabelImage, typename TIntensityImage = TLabelImage>

virtual void itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::CalculateOrientedIntensityRegionsOff ( )

virtual

template<typename TLabelImage, typename TIntensityImage = TLabelImage>

virtual void itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::CalculateOrientedIntensityRegionsOn ( )

virtual

template<typename TLabelImage, typename TIntensityImage = TLabelImage>

virtual void itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::CalculateOrientedLabelRegionsOff ( )

virtual

template<typename TLabelImage, typename TIntensityImage = TLabelImage>

virtual void itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::CalculateOrientedLabelRegionsOn ( )

virtual

template<typename TLabelImage, typename TIntensityImage = TLabelImage>

virtual void itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::CalculatePixelIndicesOff ( )

virtual

template<typename TLabelImage, typename TIntensityImage = TLabelImage>

virtual void itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::CalculatePixelIndicesOn ( )

virtual

template<typename TLabelImage, typename TIntensityImage = TLabelImage>

virtual::itk::LightObject::Pointer itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::CreateAnother ( void  ) const

virtual

Create an object from an instance, potentially deferring to a factory. This method allows you to create an instance of an object that is exactly the same type as the referring object. This is useful in cases where an object has been cast back to a base class.

Reimplemented from itk::Object.

template<typename TLabelImage, typename TIntensityImage = TLabelImage>

void itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::GenerateData ( void  )

protectedvirtual

A version of GenerateData() specific for image processing filters. This implementation will split the processing across multiple threads. The buffer is allocated by this method. Then the BeforeThreadedGenerateData() method is called (if provided). Then, a series of threads are spawned each calling ThreadedGenerateData(). After all the threads have completed processing, the AfterThreadedGenerateData() method is called (if provided). If an image processing filter cannot be threaded, the filter should provide an implementation of GenerateData(). That implementation is responsible for allocating the output buffer. If a filter an be threaded, it should NOT provide a GenerateData() method but should provide a ThreadedGenerateData() instead.

See Also

ThreadedGenerateData()

Reimplemented from itk::ImageSource< TIntensityImage >.

template<typename TLabelImage, typename TIntensityImage = TLabelImage>

AxesLengthType itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::GetAxesLength

(

LabelPixelType

label

)

const

Return the axes length for a label.

template<typename TLabelImage, typename TIntensityImage = TLabelImage>

BoundingBoxType itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::GetBoundingBox

(

LabelPixelType

label

)

const

Return the computed bounding box for a label. This is organized in min/max pairs as [min(X), max(X), min(Y), max(Y), min(Z), max(Z),...]

template<typename TLabelImage, typename TIntensityImage = TLabelImage>

LabelSizeType itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::GetBoundingBoxSize

(

LabelPixelType

label

)

const

Return the size of the bounding box.

template<typename TLabelImage, typename TIntensityImage = TLabelImage>

RealType itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::GetBoundingBoxVolume

(

LabelPixelType

label

)

const

Return the volume of the bounding box.

template<typename TLabelImage, typename TIntensityImage = TLabelImage>

virtual bool itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::GetCalculateOrientedBoundingBox ( )

virtual

template<typename TLabelImage, typename TIntensityImage = TLabelImage>

virtual bool itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::GetCalculateOrientedIntensityRegions ( )

virtual

template<typename TLabelImage, typename TIntensityImage = TLabelImage>

virtual bool itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::GetCalculateOrientedLabelRegions ( )

virtual

template<typename TLabelImage, typename TIntensityImage = TLabelImage>

virtual bool itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::GetCalculatePixelIndices ( )

virtual

template<typename TLabelImage, typename TIntensityImage = TLabelImage>

LabelPointType itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::GetCentroid

(

LabelPixelType

label

)

const

Return the unweighted centroid for a label.

template<typename TLabelImage, typename TIntensityImage = TLabelImage>

RealType itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::GetEccentricity

(

LabelPixelType

label

)

const

Return the eccentricity for a label.

template<typename TLabelImage, typename TIntensityImage = TLabelImage>

VectorType itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::GetEigenvalues

(

LabelPixelType

label

)

const

Return the eigenvalues as a vector.

template<typename TLabelImage, typename TIntensityImage = TLabelImage>

MatrixType itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::GetEigenvectors

(

LabelPixelType

label

)

const

Return the eigenvectors as a matrix.

template<typename TLabelImage, typename TIntensityImage = TLabelImage>

RealType itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::GetElongation

(

LabelPixelType

label

)

const

Return the elongation for a label. This is defined as the length of the major axis divided by the length of the minor axis.

template<typename TLabelImage, typename TIntensityImage = TLabelImage>

RealType itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::GetIntegratedIntensity

(

LabelPixelType

label

)

const

Return the number of pixels for all labels. Return the computed integrated pixel intensity for a label.

template<typename TLabelImage, typename TIntensityImage = TLabelImage>

const TIntensityImage* itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::GetIntensityInput ( ) const

inline

Get the label image

Definition at line 344 of file itkLabelGeometryImageFilter.h.

References itk::ProcessObject::GetInput().

template<typename TLabelImage, typename TIntensityImage = TLabelImage>

std::vector< LabelPixelType > itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::GetLabels ( ) const

inline

Get the labels that are in the image.

Definition at line 368 of file itkLabelGeometryImageFilter.h.

References itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::m_AllLabels.

template<typename TLabelImage, typename TIntensityImage = TLabelImage>

RealType itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::GetMajorAxisLength

(

LabelPixelType

label

)

const

Return the major axis length for a label. This is a convenience class that returns the longest length from GetAxesLength.

template<typename TLabelImage, typename TIntensityImage = TLabelImage>

RealType itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::GetMinorAxisLength

(

LabelPixelType

label

)

const

Return the minor axis length for a label. This is a convenience class that returns the shortest length from GetAxesLength.

template<typename TLabelImage, typename TIntensityImage = TLabelImage>

virtual const char* itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::GetNameOfClass ( ) const

virtual

Runtime information support.

Reimplemented from itk::ImageToImageFilter< TLabelImage, TIntensityImage >.

template<typename TLabelImage, typename TIntensityImage = TLabelImage>

SizeValueType itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::GetNumberOfLabels ( ) const

inline

Definition at line 362 of file itkLabelGeometryImageFilter.h.

References itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::GetNumberOfObjects().

template<typename TLabelImage, typename TIntensityImage = TLabelImage>

SizeValueType itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::GetNumberOfObjects ( ) const

inline

Get the number of labels used

Definition at line 357 of file itkLabelGeometryImageFilter.h.

References itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::m_LabelGeometryMapper.

Referenced by itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::GetNumberOfLabels().

template<typename TLabelImage, typename TIntensityImage = TLabelImage>

RealType itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::GetOrientation

(

LabelPixelType

label

)

const

Return the orientation for a label defined in radians.

template<typename TLabelImage, typename TIntensityImage = TLabelImage>

LabelPointType itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::GetOrientedBoundingBoxOrigin

(

LabelPixelType

label

)

const

Return the origin of the oriented bounding box.

template<typename TLabelImage, typename TIntensityImage = TLabelImage>

LabelPointType itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::GetOrientedBoundingBoxSize

(

LabelPixelType

label

)

const

Return the size of the oriented bounding box.

template<typename TLabelImage, typename TIntensityImage = TLabelImage>

BoundingBoxVerticesType itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::GetOrientedBoundingBoxVertices

(

LabelPixelType

label

)

const

Return the oriented bounding box vertices. The order of the vertices corresponds with binary counting, where min is zero and max is one. For example, in 2D, binary counting will give [0,0],[0,1],[1,0],[1,1], which corresponds to [minX,minY],[minX,maxY],[maxX,minY],[maxX,maxY]. Each vertex is defined as an ND point.

template<typename TLabelImage, typename TIntensityImage = TLabelImage>

RealType itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::GetOrientedBoundingBoxVolume

(

LabelPixelType

label

)

const

Return the volume of the oriented bounding box.

template<typename TLabelImage, typename TIntensityImage = TLabelImage>

TIntensityImage* itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::GetOrientedIntensityImage

(

LabelPixelType

label

)

const

Return the intensity region defined by the oriented bounding box.

template<typename TLabelImage, typename TIntensityImage = TLabelImage>

TLabelImage* itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::GetOrientedLabelImage

(

LabelPixelType

label

)

const

Return the label region defined by the oriented bounding box.

template<typename TLabelImage, typename TIntensityImage = TLabelImage>

LabelIndicesType itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::GetPixelIndices

(

LabelPixelType

label

)

const

Return the all pixel indices for a label.

template<typename TLabelImage, typename TIntensityImage = TLabelImage>

RegionType itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::GetRegion

(

LabelPixelType

label

)

const

Return the region defined by the bounding box.

template<typename TLabelImage, typename TIntensityImage = TLabelImage>

MatrixType itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::GetRotationMatrix

(

LabelPixelType

label

)

const

Return the rotation matrix defined by the eigenvalues/eigenvectors.

template<typename TLabelImage, typename TIntensityImage = TLabelImage>

SizeValueType itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::GetVolume

(

LabelPixelType

label

)

const

Return the number of pixels for a label. This is the same as the volume and the zero order moment

template<typename TLabelImage, typename TIntensityImage = TLabelImage>

LabelPointType itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::GetWeightedCentroid

(

LabelPixelType

label

)

const

Return the weighted centroid for a label.

template<typename TLabelImage, typename TIntensityImage = TLabelImage>

bool itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::HasLabel ( LabelPixelType  label ) const

inline

Does the specified label exist? Can only be called after a call to Update().

Definition at line 351 of file itkLabelGeometryImageFilter.h.

References itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::m_LabelGeometryMapper.

template<typename TLabelImage, typename TIntensityImage = TLabelImage>

static Pointer itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::New ( )

static

Method for creation through the object factory.

template<typename TLabelImage, typename TIntensityImage = TLabelImage>

void itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::operator= ( const Self &  )

private

template<typename TLabelImage, typename TIntensityImage = TLabelImage>

void itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::PrintSelf ( std::ostream &  os, Indent  indent  ) const

protectedvirtual

Methods invoked by Print() to print information about the object including superclasses. Typically not called by the user (use Print() instead) but used in the hierarchical print process to combine the output of several classes.

Reimplemented from itk::ImageToImageFilter< TLabelImage, TIntensityImage >.

template<typename TLabelImage, typename TIntensityImage = TLabelImage>

void itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::SetCalculateOrientedBoundingBox ( const bool  value )

inline

Definition at line 284 of file itkLabelGeometryImageFilter.h.

References itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::m_CalculateOrientedBoundingBox, itk::Object::Modified(), and itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::SetCalculatePixelIndices().

Referenced by itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::SetCalculateOrientedIntensityRegions(), and itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::SetCalculateOrientedLabelRegions().

template<typename TLabelImage, typename TIntensityImage = TLabelImage>

void itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::SetCalculateOrientedIntensityRegions ( const bool  value )

inline

Definition at line 320 of file itkLabelGeometryImageFilter.h.

References itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::m_CalculateOrientedIntensityRegions, itk::Object::Modified(), and itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::SetCalculateOrientedBoundingBox().

template<typename TLabelImage, typename TIntensityImage = TLabelImage>

void itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::SetCalculateOrientedLabelRegions ( const bool  value )

inline

Definition at line 302 of file itkLabelGeometryImageFilter.h.

References itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::m_CalculateOrientedLabelRegions, itk::Object::Modified(), and itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::SetCalculateOrientedBoundingBox().

template<typename TLabelImage, typename TIntensityImage = TLabelImage>

void itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::SetCalculatePixelIndices ( const bool  value )

inline

Definition at line 257 of file itkLabelGeometryImageFilter.h.

References itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::m_CalculateOrientedBoundingBox, itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::m_CalculateOrientedIntensityRegions, itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::m_CalculateOrientedLabelRegions, itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::m_CalculatePixelIndices, and itk::Object::Modified().

Referenced by itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::SetCalculateOrientedBoundingBox().

template<typename TLabelImage, typename TIntensityImage = TLabelImage>

void itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::SetIntensityInput ( const TIntensityImage *  input )

inline

Set the intensity image

Definition at line 337 of file itkLabelGeometryImageFilter.h.

References itk::ProcessObject::SetNthInput().

template<typename TLabelImage, typename TIntensityImage = TLabelImage>

itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::typedef

(

Concept::HasNumericTraits< PixelType >

)

This class requires InputHasNumericTraitsCheck in the form of ( Concept::HasNumericTraits< PixelType > )

Member Data Documentation

template<typename TLabelImage, typename TIntensityImage = TLabelImage>

const unsigned int itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::ImageDimension = TLabelImage::ImageDimension

static

Image related typedefs.

Definition at line 113 of file itkLabelGeometryImageFilter.h.

Referenced by itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::LabelGeometry::LabelGeometry().

template<typename TLabelImage, typename TIntensityImage = TLabelImage>

LabelsType itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::m_AllLabels

private

Definition at line 488 of file itkLabelGeometryImageFilter.h.

Referenced by itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::GetLabels().

template<typename TLabelImage, typename TIntensityImage = TLabelImage>

bool itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::m_CalculateOrientedBoundingBox

private

Definition at line 482 of file itkLabelGeometryImageFilter.h.

Referenced by itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::SetCalculateOrientedBoundingBox(), and itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::SetCalculatePixelIndices().

template<typename TLabelImage, typename TIntensityImage = TLabelImage>

bool itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::m_CalculateOrientedIntensityRegions

private

Definition at line 484 of file itkLabelGeometryImageFilter.h.

Referenced by itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::SetCalculateOrientedIntensityRegions(), and itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::SetCalculatePixelIndices().

template<typename TLabelImage, typename TIntensityImage = TLabelImage>

bool itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::m_CalculateOrientedLabelRegions

private

Definition at line 483 of file itkLabelGeometryImageFilter.h.

Referenced by itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::SetCalculateOrientedLabelRegions(), and itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::SetCalculatePixelIndices().

template<typename TLabelImage, typename TIntensityImage = TLabelImage>

bool itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::m_CalculatePixelIndices

private

Definition at line 481 of file itkLabelGeometryImageFilter.h.

Referenced by itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::SetCalculatePixelIndices().

template<typename TLabelImage, typename TIntensityImage = TLabelImage>

LabelGeometry itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::m_LabelGeometry

private

Definition at line 487 of file itkLabelGeometryImageFilter.h.

template<typename TLabelImage, typename TIntensityImage = TLabelImage>

MapType itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::m_LabelGeometryMapper

private

Definition at line 486 of file itkLabelGeometryImageFilter.h.

Referenced by itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::GetNumberOfObjects(), and itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::HasLabel().

template<typename TLabelImage, typename TIntensityImage = TLabelImage>

SimpleFastMutexLock itk::LabelGeometryImageFilter< TLabelImage, TIntensityImage >::m_Mutex

private

Definition at line 490 of file itkLabelGeometryImageFilter.h.

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The documentation for this class was generated from the following file:

• itkLabelGeometryImageFilter.h