#include <itkLabelImageGaussianInterpolateImageFunction.h>

Inheritance diagram for itk::LabelImageGaussianInterpolateImageFunction< TInputImage, TCoordRep, TPixelCompare >:

Collaboration diagram for itk::LabelImageGaussianInterpolateImageFunction< TInputImage, TCoordRep, TPixelCompare >:

Detailed Description

template<typename TInputImage, typename TCoordRep = double, typename TPixelCompare = std::less<typename itk::NumericTraits<typename TInputImage::PixelType>::RealType>>
class itk::LabelImageGaussianInterpolateImageFunction< TInputImage, TCoordRep, TPixelCompare >

Interpolation function for multi-label images that implicitly smooths each unique value in the image corresponding to each label set element and returns the corresponding label set element with the largest wieght.

This filter is an alternative to nearest neighbor interpolation for multi-label images. Given a multi-label image I with label set L, this function returns a label at the non-voxel position I(x), based on the following rule

$I(x) = \arg\max_{l \in L} (G_\sigma * I_l)(x)$

Where $ I_l $ is the l-th binary component of the multilabel image. In other words, each label in the multi-label image is convolved with a Gaussian, and the label for which the response is largest is returned. For sigma=0, this is just nearest neighbor interpolation.

This class defines an N-dimensional Gaussian interpolation function for label using the vnl error function. The two parameters associated with this function are:

Sigma - a scalar array of size ImageDimension determining the width of the interpolation function.
Alpha - a scalar specifying the cutoff distance over which the function is calculated.

Note: The input image can be of any type, but the number of unique intensity values in the image will determine the amount of memory needed to complete each interpolation.

Author: Paul Yushkevich; Nick Tustison

Definition at line 63 of file itkLabelImageGaussianInterpolateImageFunction.h.

Public Types
typedef Superclass::ArrayType	ArrayType

typedef SmartPointer< const Self >	ConstPointer

typedef Superclass::ContinuousIndexType	ContinuousIndexType

typedef Superclass::IndexType	IndexType

typedef Superclass::InputImageType	InputImageType

typedef TInputImage::PixelType	InputPixelType

typedef Superclass::OutputType	OutputType

typedef SmartPointer< Self >	Pointer

typedef Superclass::RealType	RealType

typedef LabelImageGaussianInterpolateImageFunction	Self

typedef GaussianInterpolateImageFunction < TInputImage, TCoordRep >	Superclass

Public Types inherited from itk::GaussianInterpolateImageFunction< TInputImage, TCoordRep >
typedef FixedArray< RealType, ImageDimension >	ArrayType

typedef SmartPointer< const Self >	ConstPointer

typedef Superclass::ContinuousIndexType	ContinuousIndexType

typedef Superclass::IndexType	IndexType

typedef Superclass::InputImageType	InputImageType

typedef Superclass::OutputType	OutputType

typedef SmartPointer< Self >	Pointer

typedef Superclass::RealType	RealType

typedef GaussianInterpolateImageFunction	Self

typedef InterpolateImageFunction < TInputImage, TCoordRep >	Superclass

Public Types inherited from itk::InterpolateImageFunction< TInputImage, TCoordRep >
typedef SmartPointer< const Self >	ConstPointer

typedef Superclass::ContinuousIndexType	ContinuousIndexType

typedef Superclass::IndexType	IndexType

typedef Superclass::IndexValueType	IndexValueType

typedef Superclass::InputImageType	InputImageType

typedef Superclass::OutputType	OutputType

typedef SmartPointer< Self >	Pointer

typedef Superclass::PointType	PointType

typedef NumericTraits < typename TInputImage::PixelType > ::RealType	RealType

typedef InterpolateImageFunction	Self

typedef ImageFunction < TInputImage, typename NumericTraits< typename TInputImage::PixelType > ::RealType, TCoordRep >	Superclass

Public Types inherited from itk::ImageFunction< TInputImage, NumericTraits< TInputImage::PixelType >::RealType, TCoordRep >
typedef SmartPointer< const Self >	ConstPointer

typedef ContinuousIndex < TCoordRep, itkGetStaticConstMacro(ImageDimension) >	ContinuousIndexType

typedef TCoordRep	CoordRepType

typedef InputImageType::IndexType	IndexType

typedef InputImageType::IndexValueType	IndexValueType

typedef InputImageType::ConstPointer	InputImageConstPointer

typedef TInputImage	InputImageType

typedef InputImageType::PixelType	InputPixelType

typedef NumericTraits < TInputImage::PixelType > ::RealType	OutputType

typedef SmartPointer< Self >	Pointer

typedef Point< TCoordRep, itkGetStaticConstMacro(ImageDimension) >	PointType

typedef ImageFunction	Self

typedef FunctionBase< Point < TCoordRep, itkGetStaticConstMacro(ImageDimension) > , NumericTraits < TInputImage::PixelType > ::RealType >	Superclass

Public Types inherited from itk::FunctionBase< Point< TCoordRep, TInputImage::ImageDimension >, NumericTraits< TInputImage::PixelType >::RealType >
typedef SmartPointer< const Self >	ConstPointer

typedef Point< TCoordRep, TInputImage::ImageDimension >	InputType

typedef NumericTraits < TInputImage::PixelType > ::RealType	OutputType

typedef SmartPointer< Self >	Pointer

typedef FunctionBase	Self

typedef Object	Superclass

Public Types inherited from itk::Object
typedef SmartPointer< const Self >	ConstPointer

typedef SmartPointer< Self >	Pointer

typedef Object	Self

typedef LightObject	Superclass

Public Types inherited from itk::LightObject
typedef SmartPointer< const Self >	ConstPointer

typedef SmartPointer< Self >	Pointer

typedef LightObject	Self

Public Member Functions
virtual ::itk::LightObject::Pointer	CreateAnother (void) const

virtual OutputType	EvaluateAtContinuousIndex (const ContinuousIndexType &cindex) const

virtual const char *	GetNameOfClass () const

Public Member Functions inherited from itk::GaussianInterpolateImageFunction< TInputImage, TCoordRep >
virtual void	SetInputImage (const TInputImage *image)

virtual void	SetSigma (const ArrayType s)

virtual void	SetSigma (RealType *s)

virtual ArrayType	GetSigma () const

virtual void	SetAlpha (const RealType a)

virtual RealType	GetAlpha () const

virtual void	SetParameters (RealType *sigma, RealType alpha)

Public Member Functions inherited from itk::InterpolateImageFunction< TInputImage, TCoordRep >
virtual OutputType	Evaluate (const PointType &point) const

virtual OutputType	EvaluateAtIndex (const IndexType &index) const

Public Member Functions inherited from itk::ImageFunction< TInputImage, NumericTraits< TInputImage::PixelType >::RealType, TCoordRep >
void	ConvertContinuousIndexToNearestIndex (const ContinuousIndexType &cindex, IndexType &index) const

void	ConvertPointToContinuousIndex (const PointType &point, ContinuousIndexType &cindex) const

void	ConvertPointToNearestIndex (const PointType &point, IndexType &index) const

virtual NumericTraits < TInputImage::PixelType > ::RealType	EvaluateAtContinuousIndex (const ContinuousIndexType &index) const =0

virtual NumericTraits < TInputImage::PixelType > ::RealType	EvaluateAtIndex (const IndexType &index) const =0

virtual const ContinuousIndexType &	GetEndContinuousIndex () const

virtual const IndexType &	GetEndIndex () const

const InputImageType *	GetInputImage () const

virtual const ContinuousIndexType &	GetStartContinuousIndex () const

virtual const IndexType &	GetStartIndex () const

virtual bool	IsInsideBuffer (const IndexType &index) const

virtual bool	IsInsideBuffer (const ContinuousIndexType &index) const

virtual bool	IsInsideBuffer (const PointType &point) const

Public Member Functions inherited from itk::FunctionBase< Point< TCoordRep, TInputImage::ImageDimension >, NumericTraits< TInputImage::PixelType >::RealType >
virtual OutputType	Evaluate (const InputType &input) const =0

Public Member Functions inherited from itk::Object
unsigned long	AddObserver (const EventObject &event, Command *)

unsigned long	AddObserver (const EventObject &event, Command *) const

virtual void	DebugOff () const

virtual void	DebugOn () const

Command *	GetCommand (unsigned long tag)

bool	GetDebug () const

MetaDataDictionary &	GetMetaDataDictionary (void)

const MetaDataDictionary &	GetMetaDataDictionary (void) const

virtual ModifiedTimeType	GetMTime () const

virtual const TimeStamp &	GetTimeStamp () const

bool	HasObserver (const EventObject &event) const

void	InvokeEvent (const EventObject &)

void	InvokeEvent (const EventObject &) const

virtual void	Modified () const

virtual void	Register () const ITK_OVERRIDE

void	RemoveAllObservers ()

void	RemoveObserver (unsigned long tag)

void	SetDebug (bool debugFlag) const

void	SetMetaDataDictionary (const MetaDataDictionary &rhs)

virtual void	SetReferenceCount (int) ITK_OVERRIDE

virtual void	UnRegister () const ITK_OVERRIDE

virtual void	SetObjectName (std::string _arg)

virtual const std::string &	GetObjectName () const

Public Member Functions inherited from itk::LightObject
virtual void	Delete ()

virtual int	GetReferenceCount () const

	itkCloneMacro (Self)

void	Print (std::ostream &os, Indent indent=0) const

Static Public Member Functions
static Pointer	New ()

Static Public Member Functions inherited from itk::GaussianInterpolateImageFunction< TInputImage, TCoordRep >
static Pointer	New ()

Static Public Member Functions inherited from itk::Object
static bool	GetGlobalWarningDisplay ()

static void	GlobalWarningDisplayOff ()

static void	GlobalWarningDisplayOn ()

static Pointer	New ()

static void	SetGlobalWarningDisplay (bool flag)

Static Public Member Functions inherited from itk::LightObject
static void	BreakOnError ()

static Pointer	New ()

Static Public Attributes
static const unsigned int	ImageDimension = TInputImage::ImageDimension

Static Public Attributes inherited from itk::GaussianInterpolateImageFunction< TInputImage, TCoordRep >
static const unsigned int	ImageDimension = TInputImage::ImageDimension

Static Public Attributes inherited from itk::InterpolateImageFunction< TInputImage, TCoordRep >
static const unsigned int	ImageDimension = Superclass::ImageDimension

Static Public Attributes inherited from itk::ImageFunction< TInputImage, NumericTraits< TInputImage::PixelType >::RealType, TCoordRep >
static const unsigned int	ImageDimension

Protected Member Functions
	LabelImageGaussianInterpolateImageFunction ()

	~LabelImageGaussianInterpolateImageFunction ()

Protected Member Functions inherited from itk::GaussianInterpolateImageFunction< TInputImage, TCoordRep >
virtual void	ComputeBoundingBox ()

virtual void	ComputeErrorFunctionArray (unsigned int dimension, RealType cindex, vnl_vector< RealType > &erfArray, vnl_vector< RealType > &gerfArray, bool evaluateGradient=false) const

	GaussianInterpolateImageFunction ()

void	PrintSelf (std::ostream &os, Indent indent) const

	~GaussianInterpolateImageFunction ()

Protected Member Functions inherited from itk::InterpolateImageFunction< TInputImage, TCoordRep >
	InterpolateImageFunction ()

void	PrintSelf (std::ostream &os, Indent indent) const

	~InterpolateImageFunction ()

Protected Member Functions inherited from itk::ImageFunction< TInputImage, NumericTraits< TInputImage::PixelType >::RealType, TCoordRep >
	ImageFunction ()

void	PrintSelf (std::ostream &os, Indent indent) const

	~ImageFunction ()

Protected Member Functions inherited from itk::FunctionBase< Point< TCoordRep, TInputImage::ImageDimension >, NumericTraits< TInputImage::PixelType >::RealType >
	FunctionBase ()

	~FunctionBase ()

Protected Member Functions inherited from itk::Object
	Object ()

bool	PrintObservers (std::ostream &os, Indent indent) const

virtual void	SetTimeStamp (const TimeStamp &time)

virtual	~Object ()

Protected Member Functions inherited from itk::LightObject
virtual LightObject::Pointer	InternalClone () const

	LightObject ()

virtual void	PrintHeader (std::ostream &os, Indent indent) const

virtual void	PrintTrailer (std::ostream &os, Indent indent) const

virtual	~LightObject ()

Private Member Functions
virtual OutputType	EvaluateAtContinuousIndex (const ContinuousIndexType &, OutputType *) const

	LabelImageGaussianInterpolateImageFunction (const Self &)

void	operator= (const Self &)

Additional Inherited Members
Protected Types inherited from itk::LightObject
typedef int	InternalReferenceCountType

Protected Attributes inherited from itk::GaussianInterpolateImageFunction< TInputImage, TCoordRep >
RealType	m_Alpha

ArrayType	m_BoundingBoxEnd

ArrayType	m_BoundingBoxStart

ArrayType	m_CutoffDistance

ArrayType	m_ScalingFactor

ArrayType	m_Sigma

Protected Attributes inherited from itk::ImageFunction< TInputImage, NumericTraits< TInputImage::PixelType >::RealType, TCoordRep >
ContinuousIndexType	m_EndContinuousIndex

IndexType	m_EndIndex

InputImageConstPointer	m_Image

ContinuousIndexType	m_StartContinuousIndex

IndexType	m_StartIndex

Protected Attributes inherited from itk::LightObject
InternalReferenceCountType	m_ReferenceCount

SimpleFastMutexLock	m_ReferenceCountLock