itk::Statistics::ImageToListSampleAdaptor< TImage > Class Template Reference

#include <itkImageToListSampleAdaptor.h>

Inheritance diagram for itk::Statistics::ImageToListSampleAdaptor< TImage >:

Collaboration diagram for itk::Statistics::ImageToListSampleAdaptor< TImage >:

Detailed Description

template<typename TImage>
class itk::Statistics::ImageToListSampleAdaptor< TImage >

This class provides ListSample interface to ITK Image.

After calling SetImage( const Image * ) method to plug in the image object, users can use Sample interfaces to access Image data. The resulting data are a list of measurement vectors.

The measurment vector type is determined from the image pixel type. This class handles images with scalar, fixed array or variable length vector pixel types.

See Also

Sample, ListSample

Wiki Examples:

• All Examples
• Create a list of samples from an image without duplicating the data

Examples:

Statistics/ImageHistogram1.cxx, Statistics/ImageToListSampleAdaptor.cxx, and Statistics/ScalarImageKmeansModelEstimator.cxx.

Definition at line 53 of file itkImageToListSampleAdaptor.h.

Classes
class	ConstIterator
class	Iterator

Public Types
typedef Superclass::AbsoluteFrequencyType	AbsoluteFrequencyType
typedef SmartPointer< const Self >	ConstPointer
typedef ImageRegionConstIterator < ImageType >	ImageConstIteratorType
typedef ImageType::ConstPointer	ImageConstPointer
typedef ImageRegionIterator < ImageType >	ImageIteratorType
typedef ImageType::Pointer	ImagePointer
typedef TImage	ImageType
typedef ImageType::IndexType	IndexType
typedef Superclass::InstanceIdentifier	InstanceIdentifier
typedef MeasurementVectorPixelTraits < PixelType >	MeasurementPixelTraitsType
typedef MeasurementVectorTraitsType::ValueType	MeasurementType
typedef Superclass::MeasurementVectorSizeType	MeasurementVectorSizeType
typedef MeasurementVectorTraitsTypes < MeasurementVectorType >	MeasurementVectorTraitsType
typedef MeasurementPixelTraitsType::MeasurementVectorType	MeasurementVectorType
typedef ImageType::PixelContainerConstPointer	PixelContainerConstPointer
typedef PixelTraits< typename TImage::PixelType >	PixelTraitsType
typedef ImageType::PixelType	PixelType
typedef SmartPointer< Self >	Pointer
typedef ImageToListSampleAdaptor	Self
typedef ListSample< typename MeasurementVectorPixelTraits < typename TImage::PixelType > ::MeasurementVectorType >	Superclass
typedef Superclass::TotalAbsoluteFrequencyType	TotalAbsoluteFrequencyType
typedef MeasurementVectorType	ValueType
Public Types inherited from itk::Statistics::ListSample< MeasurementVectorPixelTraits< TImage::PixelType >::MeasurementVectorType >
typedef Superclass::AbsoluteFrequencyType	AbsoluteFrequencyType
typedef SmartPointer< const Self >	ConstPointer
typedef Superclass::InstanceIdentifier	InstanceIdentifier
typedef std::vector < MeasurementVectorType >	InternalDataContainerType
typedef Superclass::MeasurementType	MeasurementType
typedef Superclass::MeasurementVectorSizeType	MeasurementVectorSizeType
typedef Superclass::MeasurementVectorType	MeasurementVectorType
typedef SmartPointer< Self >	Pointer
typedef ListSample	Self
typedef Sample < MeasurementVectorPixelTraits < TImage::PixelType > ::MeasurementVectorType >	Superclass
typedef Superclass::TotalAbsoluteFrequencyType	TotalAbsoluteFrequencyType
typedef MeasurementVectorType	ValueType
Public Types inherited from itk::Statistics::Sample< MeasurementVectorPixelTraits< TImage::PixelType >::MeasurementVectorType >
typedef MeasurementVectorTraits::AbsoluteFrequencyType	AbsoluteFrequencyType
typedef SmartPointer< const Self >	ConstPointer
typedef MeasurementVectorTraits::InstanceIdentifier	InstanceIdentifier
typedef MeasurementVectorTraitsTypes < MeasurementVectorType > ::ValueType	MeasurementType
typedef unsigned int	MeasurementVectorSizeType
typedef MeasurementVectorPixelTraits < TImage::PixelType > ::MeasurementVectorType	MeasurementVectorType
typedef SmartPointer< Self >	Pointer
typedef Sample	Self
typedef DataObject	Superclass
typedef NumericTraits < AbsoluteFrequencyType > ::AccumulateType	TotalAbsoluteFrequencyType
Public Types inherited from itk::DataObject
typedef SmartPointer< const Self >	ConstPointer
typedef std::string	DataObjectIdentifierType
typedef std::vector< Pointer > ::size_type	DataObjectPointerArraySizeType
typedef SmartPointer< Self >	Pointer
typedef DataObject	Self
typedef Object	Superclass
Public Types inherited from itk::Object
typedef SmartPointer< const Self >	ConstPointer
typedef SmartPointer< Self >	Pointer
typedef Object	Self
typedef LightObject	Superclass
Public Types inherited from itk::LightObject
typedef SmartPointer< const Self >	ConstPointer
typedef SmartPointer< Self >	Pointer
typedef LightObject	Self

Public Member Functions
virtual ::itk::LightObject::Pointer	CreateAnother (void) const
AbsoluteFrequencyType	GetFrequency (InstanceIdentifier id) const
const TImage *	GetImage () const
virtual const MeasurementVectorType &	GetMeasurementVector (InstanceIdentifier id) const
virtual MeasurementVectorSizeType	GetMeasurementVectorSize () const
virtual const char *	GetNameOfClass () const
TotalAbsoluteFrequencyType	GetTotalFrequency () const
void	SetImage (const TImage *image)
InstanceIdentifier	Size () const
Iterator	Begin ()
Public Member Functions inherited from itk::Statistics::ListSample< MeasurementVectorPixelTraits< TImage::PixelType >::MeasurementVectorType >
Iterator	Begin ()
ConstIterator	Begin () const
void	Clear ()
virtual ::itk::LightObject::Pointer	CreateAnother (void) const
Iterator	End ()
ConstIterator	End () const
AbsoluteFrequencyType	GetFrequency (InstanceIdentifier id) const
const MeasurementVectorType &	GetMeasurementVector (InstanceIdentifier id) const
TotalAbsoluteFrequencyType	GetTotalFrequency () const
virtual void	Graft (const DataObject *thatObject)
void	PushBack (const MeasurementVectorType &mv)
void	Resize (InstanceIdentifier newsize)
void	SetMeasurement (InstanceIdentifier id, unsigned int dim, const MeasurementType &value)
void	SetMeasurementVector (InstanceIdentifier id, const MeasurementVectorType &mv)
InstanceIdentifier	Size () const
Public Member Functions inherited from itk::Statistics::Sample< MeasurementVectorPixelTraits< TImage::PixelType >::MeasurementVectorType >
virtual AbsoluteFrequencyType	GetFrequency (InstanceIdentifier id) const =0
virtual const MeasurementVectorType &	GetMeasurementVector (InstanceIdentifier id) const =0
virtual void	SetMeasurementVectorSize (MeasurementVectorSizeType s)
Public Member Functions inherited from itk::DataObject
virtual void	CopyInformation (const DataObject *)
virtual void	DataHasBeenGenerated ()
void	DisconnectPipeline ()
bool	GetDataReleased () const
virtual const bool &	GetReleaseDataFlag () const
SmartPointerForwardReference < ProcessObject >	GetSource () const
DataObjectPointerArraySizeType	GetSourceOutputIndex () const
const DataObjectIdentifierType &	GetSourceOutputName () const
virtual ModifiedTimeType	GetUpdateMTime () const
virtual void	Initialize ()
virtual void	PrepareForNewData ()
virtual void	PropagateRequestedRegion ()
void	ReleaseData ()
virtual void	ReleaseDataFlagOff ()
virtual void	ReleaseDataFlagOn ()
virtual bool	RequestedRegionIsOutsideOfTheBufferedRegion ()
virtual void	ResetPipeline ()
void	SetReleaseDataFlag (bool flag)
virtual void	SetRequestedRegion (const DataObject *)
virtual void	SetRequestedRegionToLargestPossibleRegion ()
bool	ShouldIReleaseData () const
virtual void	Update ()
virtual void	UpdateOutputData ()
virtual void	UpdateOutputInformation ()
virtual bool	VerifyRequestedRegion ()
void	SetPipelineMTime (ModifiedTimeType time)
virtual const ModifiedTimeType &	GetPipelineMTime () const
virtual void	SetRealTimeStamp (RealTimeStamp _arg)
virtual const RealTimeStamp &	GetRealTimeStamp () const
Public Member Functions inherited from itk::Object
unsigned long	AddObserver (const EventObject &event, Command *)
unsigned long	AddObserver (const EventObject &event, Command *) const
virtual void	DebugOff () const
virtual void	DebugOn () const
Command *	GetCommand (unsigned long tag)
bool	GetDebug () const
MetaDataDictionary &	GetMetaDataDictionary (void)
const MetaDataDictionary &	GetMetaDataDictionary (void) const
virtual ModifiedTimeType	GetMTime () const
virtual const TimeStamp &	GetTimeStamp () const
bool	HasObserver (const EventObject &event) const
void	InvokeEvent (const EventObject &)
void	InvokeEvent (const EventObject &) const
virtual void	Modified () const
virtual void	Register () const ITK_OVERRIDE
void	RemoveAllObservers ()
void	RemoveObserver (unsigned long tag)
void	SetDebug (bool debugFlag) const
void	SetMetaDataDictionary (const MetaDataDictionary &rhs)
virtual void	SetReferenceCount (int) ITK_OVERRIDE
virtual void	UnRegister () const ITK_OVERRIDE
virtual void	SetObjectName (std::string _arg)
virtual const std::string &	GetObjectName () const
Public Member Functions inherited from itk::LightObject
virtual void	Delete ()
virtual int	GetReferenceCount () const
	itkCloneMacro (Self)
void	Print (std::ostream &os, Indent indent=0) const

Static Public Member Functions
static Pointer	New ()
Static Public Member Functions inherited from itk::Statistics::ListSample< MeasurementVectorPixelTraits< TImage::PixelType >::MeasurementVectorType >
static Pointer	New ()
Static Public Member Functions inherited from itk::DataObject
static bool	GetGlobalReleaseDataFlag ()
static void	GlobalReleaseDataFlagOff ()
static void	GlobalReleaseDataFlagOn ()
static void	SetGlobalReleaseDataFlag (bool val)
Static Public Member Functions inherited from itk::Object
static bool	GetGlobalWarningDisplay ()
static void	GlobalWarningDisplayOff ()
static void	GlobalWarningDisplayOn ()
static Pointer	New ()
static void	SetGlobalWarningDisplay (bool flag)
Static Public Member Functions inherited from itk::LightObject
static void	BreakOnError ()
static Pointer	New ()
ImageConstPointer	m_Image
MeasurementVectorType	m_MeasurementVectorInternal
Iterator	End ()
ConstIterator	Begin () const
ConstIterator	End () const
	ImageToListSampleAdaptor ()
virtual	~ImageToListSampleAdaptor ()
void	PrintSelf (std::ostream &os, Indent indent) const
	ImageToListSampleAdaptor (const Self &)
void	operator= (const Self &)

Additional Inherited Members
Protected Types inherited from itk::LightObject
typedef int	InternalReferenceCountType
Protected Member Functions inherited from itk::Statistics::ListSample< MeasurementVectorPixelTraits< TImage::PixelType >::MeasurementVectorType >
	ListSample ()
void	PrintSelf (std::ostream &os, Indent indent) const
virtual	~ListSample ()
Protected Member Functions inherited from itk::Statistics::Sample< MeasurementVectorPixelTraits< TImage::PixelType >::MeasurementVectorType >
	Sample ()
virtual	~Sample ()
Protected Member Functions inherited from itk::DataObject
	DataObject ()
virtual void	PropagateResetPipeline ()
	~DataObject ()
Protected Member Functions inherited from itk::Object
	Object ()
bool	PrintObservers (std::ostream &os, Indent indent) const
virtual void	SetTimeStamp (const TimeStamp &time)
virtual	~Object ()
Protected Member Functions inherited from itk::LightObject
virtual LightObject::Pointer	InternalClone () const
	LightObject ()
virtual void	PrintHeader (std::ostream &os, Indent indent) const
virtual void	PrintTrailer (std::ostream &os, Indent indent) const
virtual	~LightObject ()
Protected Attributes inherited from itk::LightObject
InternalReferenceCountType	m_ReferenceCount
SimpleFastMutexLock	m_ReferenceCountLock

Member Typedef Documentation

template<typename TImage >

typedef Superclass::AbsoluteFrequencyType itk::Statistics::ImageToListSampleAdaptor< TImage >::AbsoluteFrequencyType

Definition at line 95 of file itkImageToListSampleAdaptor.h.

template<typename TImage >

typedef SmartPointer< const Self > itk::Statistics::ImageToListSampleAdaptor< TImage >::ConstPointer

Definition at line 65 of file itkImageToListSampleAdaptor.h.

template<typename TImage >

typedef ImageRegionConstIterator< ImageType > itk::Statistics::ImageToListSampleAdaptor< TImage >::ImageConstIteratorType

Definition at line 83 of file itkImageToListSampleAdaptor.h.

template<typename TImage >

typedef ImageType::ConstPointer itk::Statistics::ImageToListSampleAdaptor< TImage >::ImageConstPointer

Definition at line 76 of file itkImageToListSampleAdaptor.h.

template<typename TImage >

typedef ImageRegionIterator< ImageType > itk::Statistics::ImageToListSampleAdaptor< TImage >::ImageIteratorType

Image Iterator typedef support

Definition at line 82 of file itkImageToListSampleAdaptor.h.

template<typename TImage >

typedef ImageType::Pointer itk::Statistics::ImageToListSampleAdaptor< TImage >::ImagePointer

Definition at line 75 of file itkImageToListSampleAdaptor.h.

template<typename TImage >

typedef TImage itk::Statistics::ImageToListSampleAdaptor< TImage >::ImageType

Image typedefs

Definition at line 71 of file itkImageToListSampleAdaptor.h.

template<typename TImage >

typedef ImageType::IndexType itk::Statistics::ImageToListSampleAdaptor< TImage >::IndexType

Definition at line 77 of file itkImageToListSampleAdaptor.h.

template<typename TImage >

typedef Superclass::InstanceIdentifier itk::Statistics::ImageToListSampleAdaptor< TImage >::InstanceIdentifier

Definition at line 98 of file itkImageToListSampleAdaptor.h.

template<typename TImage >

typedef MeasurementVectorPixelTraits< PixelType > itk::Statistics::ImageToListSampleAdaptor< TImage >::MeasurementPixelTraitsType

Superclass typedefs for Measurement vector, measurement, Instance Identifier, frequency, size, size element value

Definition at line 89 of file itkImageToListSampleAdaptor.h.

template<typename TImage >

typedef MeasurementVectorTraitsType::ValueType itk::Statistics::ImageToListSampleAdaptor< TImage >::MeasurementType

Definition at line 93 of file itkImageToListSampleAdaptor.h.

template<typename TImage >

typedef Superclass::MeasurementVectorSizeType itk::Statistics::ImageToListSampleAdaptor< TImage >::MeasurementVectorSizeType

Definition at line 97 of file itkImageToListSampleAdaptor.h.

template<typename TImage >

typedef MeasurementVectorTraitsTypes< MeasurementVectorType > itk::Statistics::ImageToListSampleAdaptor< TImage >::MeasurementVectorTraitsType

Definition at line 92 of file itkImageToListSampleAdaptor.h.

template<typename TImage >

typedef MeasurementPixelTraitsType::MeasurementVectorType itk::Statistics::ImageToListSampleAdaptor< TImage >::MeasurementVectorType

Definition at line 90 of file itkImageToListSampleAdaptor.h.

template<typename TImage >

typedef ImageType::PixelContainerConstPointer itk::Statistics::ImageToListSampleAdaptor< TImage >::PixelContainerConstPointer

Definition at line 79 of file itkImageToListSampleAdaptor.h.

template<typename TImage >

typedef PixelTraits< typename TImage::PixelType > itk::Statistics::ImageToListSampleAdaptor< TImage >::PixelTraitsType

Definition at line 84 of file itkImageToListSampleAdaptor.h.

template<typename TImage >

typedef ImageType::PixelType itk::Statistics::ImageToListSampleAdaptor< TImage >::PixelType

Definition at line 78 of file itkImageToListSampleAdaptor.h.

template<typename TImage >

typedef SmartPointer< Self > itk::Statistics::ImageToListSampleAdaptor< TImage >::Pointer

Definition at line 64 of file itkImageToListSampleAdaptor.h.

template<typename TImage >

typedef ImageToListSampleAdaptor itk::Statistics::ImageToListSampleAdaptor< TImage >::Self

Standard class typedefs

Definition at line 58 of file itkImageToListSampleAdaptor.h.

template<typename TImage >

typedef ListSample< typename MeasurementVectorPixelTraits< typename TImage::PixelType >::MeasurementVectorType > itk::Statistics::ImageToListSampleAdaptor< TImage >::Superclass

Definition at line 62 of file itkImageToListSampleAdaptor.h.

template<typename TImage >

typedef Superclass::TotalAbsoluteFrequencyType itk::Statistics::ImageToListSampleAdaptor< TImage >::TotalAbsoluteFrequencyType

Definition at line 96 of file itkImageToListSampleAdaptor.h.

template<typename TImage >

typedef MeasurementVectorType itk::Statistics::ImageToListSampleAdaptor< TImage >::ValueType

Definition at line 100 of file itkImageToListSampleAdaptor.h.

Constructor & Destructor Documentation

template<typename TImage >

itk::Statistics::ImageToListSampleAdaptor< TImage >::ImageToListSampleAdaptor ( )

protected

returns an iterator that points to the end of the container

template<typename TImage >

virtual itk::Statistics::ImageToListSampleAdaptor< TImage >::~ImageToListSampleAdaptor ( )

inlineprotectedvirtual

returns an iterator that points to the end of the container

Definition at line 299 of file itkImageToListSampleAdaptor.h.

template<typename TImage >

itk::Statistics::ImageToListSampleAdaptor< TImage >::ImageToListSampleAdaptor ( const Self &  )

private

returns an iterator that points to the end of the container

Member Function Documentation

template<typename TImage >

Iterator itk::Statistics::ImageToListSampleAdaptor< TImage >::Begin ( void  )

inline

returns an iterator that points to the beginning of the container

Definition at line 253 of file itkImageToListSampleAdaptor.h.

References itk::ImageRegionConstIterator< TImage >::GoToBegin(), and itk::Statistics::ImageToListSampleAdaptor< TImage >::m_Image.

Referenced by itk::Statistics::ImageToListSampleAdaptor< TImage >::ConstIterator::ConstIterator().

template<typename TImage >

ConstIterator itk::Statistics::ImageToListSampleAdaptor< TImage >::Begin ( void  ) const

inline

returns an iterator that points to the beginning of the container

Definition at line 276 of file itkImageToListSampleAdaptor.h.

References itk::ImageRegionConstIterator< TImage >::GoToBegin(), and itk::Statistics::ImageToListSampleAdaptor< TImage >::m_Image.

template<typename TImage >

virtual::itk::LightObject::Pointer itk::Statistics::ImageToListSampleAdaptor< TImage >::CreateAnother ( void  ) const

virtual

Create an object from an instance, potentially deferring to a factory. This method allows you to create an instance of an object that is exactly the same type as the referring object. This is useful in cases where an object has been cast back to a base class.

Reimplemented from itk::Object.

template<typename TImage >

Iterator itk::Statistics::ImageToListSampleAdaptor< TImage >::End ( void  )

inline

returns an iterator that points to the end of the container

Definition at line 264 of file itkImageToListSampleAdaptor.h.

References itk::ImageRegionConstIterator< TImage >::GoToEnd(), and itk::Statistics::ImageToListSampleAdaptor< TImage >::m_Image.

template<typename TImage >

ConstIterator itk::Statistics::ImageToListSampleAdaptor< TImage >::End ( void  ) const

inline

returns an iterator that points to the end of the container

Definition at line 287 of file itkImageToListSampleAdaptor.h.

References itk::ImageRegionConstIterator< TImage >::GoToEnd(), and itk::Statistics::ImageToListSampleAdaptor< TImage >::m_Image.

template<typename TImage >

AbsoluteFrequencyType itk::Statistics::ImageToListSampleAdaptor< TImage >::GetFrequency

(

InstanceIdentifier

id

)

const

method to return frequency for a specified id

template<typename TImage >

const TImage* itk::Statistics::ImageToListSampleAdaptor< TImage >::GetImage

(

)

const

Method to get the image

template<typename TImage >

virtual const MeasurementVectorType& itk::Statistics::ImageToListSampleAdaptor< TImage >::GetMeasurementVector ( InstanceIdentifier  id ) const

virtual

method to return measurement vector for a specified id

template<typename TImage >

virtual MeasurementVectorSizeType itk::Statistics::ImageToListSampleAdaptor< TImage >::GetMeasurementVectorSize ( ) const

inlinevirtual

Get method for the length of the measurement vector

Reimplemented from itk::Statistics::Sample< MeasurementVectorPixelTraits< TImage::PixelType >::MeasurementVectorType >.

Definition at line 114 of file itkImageToListSampleAdaptor.h.

References itk::Statistics::Sample< TMeasurementVector >::GetMeasurementVectorSize(), and itk::Statistics::ImageToListSampleAdaptor< TImage >::m_Image.

template<typename TImage >

virtual const char* itk::Statistics::ImageToListSampleAdaptor< TImage >::GetNameOfClass ( ) const

virtual

Run-time type information (and related methods).

Reimplemented from itk::Statistics::ListSample< MeasurementVectorPixelTraits< TImage::PixelType >::MeasurementVectorType >.

template<typename TImage >

TotalAbsoluteFrequencyType itk::Statistics::ImageToListSampleAdaptor< TImage >::GetTotalFrequency ( ) const

virtual

method to return the total frequency

Implements itk::Statistics::Sample< MeasurementVectorPixelTraits< TImage::PixelType >::MeasurementVectorType >.

template<typename TImage >

static Pointer itk::Statistics::ImageToListSampleAdaptor< TImage >::New ( )

static

Method for creation through the object factory.

template<typename TImage >

void itk::Statistics::ImageToListSampleAdaptor< TImage >::operator= ( const Self &  )

private

returns an iterator that points to the end of the container

template<typename TImage >

void itk::Statistics::ImageToListSampleAdaptor< TImage >::PrintSelf ( std::ostream &  os, Indent  indent  ) const

protectedvirtual

returns an iterator that points to the end of the container

Reimplemented from itk::Statistics::Sample< MeasurementVectorPixelTraits< TImage::PixelType >::MeasurementVectorType >.

template<typename TImage >

void itk::Statistics::ImageToListSampleAdaptor< TImage >::SetImage

(

const TImage *

image

)

Method to set the image

template<typename TImage >

InstanceIdentifier itk::Statistics::ImageToListSampleAdaptor< TImage >::Size ( ) const

virtual

returns the number of measurement vectors in this container

Implements itk::Statistics::Sample< MeasurementVectorPixelTraits< TImage::PixelType >::MeasurementVectorType >.

Member Data Documentation

template<typename TImage >

ImageConstPointer itk::Statistics::ImageToListSampleAdaptor< TImage >::m_Image

private

returns an iterator that points to the end of the container

Definition at line 306 of file itkImageToListSampleAdaptor.h.

Referenced by itk::Statistics::ImageToListSampleAdaptor< TImage >::Begin(), itk::Statistics::ImageToListSampleAdaptor< TImage >::End(), and itk::Statistics::ImageToListSampleAdaptor< TImage >::GetMeasurementVectorSize().

template<typename TImage >

MeasurementVectorType itk::Statistics::ImageToListSampleAdaptor< TImage >::m_MeasurementVectorInternal

mutableprivate

returns an iterator that points to the end of the container

Definition at line 307 of file itkImageToListSampleAdaptor.h.

---

The documentation for this class was generated from the following file:

• itkImageToListSampleAdaptor.h