#include <itkMixtureModelComponentBase.h>

Inheritance diagram for itk::Statistics::MixtureModelComponentBase< TSample >:

Collaboration diagram for itk::Statistics::MixtureModelComponentBase< TSample >:

Detailed Description

template<typename TSample>
class itk::Statistics::MixtureModelComponentBase< TSample >

base class for distribution modules that supports analytical way to update the distribution parameters

This class expects that its subclasses (distribution components) should have analytical expressions for updating its paraters using only the measurement vectors and their associated weights.

This class can be considered as a macro class that encapsulates the storage for the weights, model (subclasses of MembershipFunctionBase), and model parameter estimators (implemenation of analytical expressions).

Subclasses of this class should define their own distribution specific membership function. For example, GaussianMixtureModelComponent class defines and creates a GaussianDensityFunction object for that matter. Subclasses should also cast such membership function object to MembershipFunctionBase object. By doing that, users can get pointers to membership functions from different distributional model

See Also: ExpectationMaximizationMixtureModelEstimator

Definition at line 56 of file itkMixtureModelComponentBase.h.

Public Types
typedef SmartPointer< const Self >	ConstPointer

typedef TSample::MeasurementVectorSizeType	MeasurementVectorSizeType

typedef TSample::MeasurementVectorType	MeasurementVectorType

typedef MembershipFunctionBase < MeasurementVectorType >	MembershipFunctionType

typedef Array< double >	ParametersType

typedef SmartPointer< Self >	Pointer

typedef MixtureModelComponentBase	Self

typedef Object	Superclass

typedef Array< double >	WeightArrayType

Public Types inherited from itk::Object
typedef SmartPointer< const Self >	ConstPointer

typedef SmartPointer< Self >	Pointer

typedef Object	Self

typedef LightObject	Superclass

Public Types inherited from itk::LightObject
typedef SmartPointer< const Self >	ConstPointer

typedef SmartPointer< Self >	Pointer

typedef LightObject	Self

Public Member Functions
void	AreParametersModified (bool flag)

bool	AreParametersModified ()

double	Evaluate (MeasurementVectorType &measurements)

virtual ParametersType	GetFullParameters ()

MembershipFunctionType *	GetMembershipFunction ()

double	GetMinimalParametersChange ()

virtual const char *	GetNameOfClass () const

const TSample *	GetSample () const

double	GetWeight (unsigned int index) const

virtual const WeightArrayType &	GetWeights () const

void	SetMinimalParametersChange (double change)

virtual void	SetParameters (const ParametersType &parameters)

virtual void	SetSample (const TSample *sample)

void	SetWeight (unsigned int index, double value)

virtual void	Update ()

Public Member Functions inherited from itk::Object
unsigned long	AddObserver (const EventObject &event, Command *)

unsigned long	AddObserver (const EventObject &event, Command *) const

virtual LightObject::Pointer	CreateAnother () const ITK_OVERRIDE

virtual void	DebugOff () const

virtual void	DebugOn () const

Command *	GetCommand (unsigned long tag)

bool	GetDebug () const

MetaDataDictionary &	GetMetaDataDictionary (void)

const MetaDataDictionary &	GetMetaDataDictionary (void) const

virtual ModifiedTimeType	GetMTime () const

virtual const TimeStamp &	GetTimeStamp () const

bool	HasObserver (const EventObject &event) const

void	InvokeEvent (const EventObject &)

void	InvokeEvent (const EventObject &) const

virtual void	Modified () const

virtual void	Register () const ITK_OVERRIDE

void	RemoveAllObservers ()

void	RemoveObserver (unsigned long tag)

void	SetDebug (bool debugFlag) const

void	SetMetaDataDictionary (const MetaDataDictionary &rhs)

virtual void	SetReferenceCount (int) ITK_OVERRIDE

virtual void	UnRegister () const ITK_OVERRIDE

virtual void	SetObjectName (std::string _arg)

virtual const std::string &	GetObjectName () const

Public Member Functions inherited from itk::LightObject
virtual void	Delete ()

virtual int	GetReferenceCount () const

	itkCloneMacro (Self)

void	Print (std::ostream &os, Indent indent=0) const

Protected Member Functions
virtual void	GenerateData ()=0

	MixtureModelComponentBase ()

virtual void	PrintSelf (std::ostream &os, Indent indent) const ITK_OVERRIDE

void	SetMembershipFunction (MembershipFunctionType *function)

virtual	~MixtureModelComponentBase ()

Protected Member Functions inherited from itk::Object
	Object ()

bool	PrintObservers (std::ostream &os, Indent indent) const

virtual void	SetTimeStamp (const TimeStamp &time)

virtual	~Object ()

Protected Member Functions inherited from itk::LightObject
virtual LightObject::Pointer	InternalClone () const

	LightObject ()

virtual void	PrintHeader (std::ostream &os, Indent indent) const

virtual void	PrintTrailer (std::ostream &os, Indent indent) const

virtual	~LightObject ()

Private Attributes
MembershipFunctionType *	m_MembershipFunction

double	m_MinimalParametersChange

ParametersType	m_Parameters

bool	m_ParametersModified

const TSample *	m_Sample

WeightArrayType	m_Weights

Additional Inherited Members
Static Public Member Functions inherited from itk::Object
static bool	GetGlobalWarningDisplay ()

static void	GlobalWarningDisplayOff ()

static void	GlobalWarningDisplayOn ()

static Pointer	New ()

static void	SetGlobalWarningDisplay (bool flag)

Static Public Member Functions inherited from itk::LightObject
static void	BreakOnError ()

static Pointer	New ()

Protected Types inherited from itk::LightObject
typedef int	InternalReferenceCountType

Protected Attributes inherited from itk::LightObject
InternalReferenceCountType	m_ReferenceCount

SimpleFastMutexLock	m_ReferenceCountLock

Member Typedef Documentation

template<typename TSample >

typedef SmartPointer< const Self > itk::Statistics::MixtureModelComponentBase< TSample >::ConstPointer

Definition at line 64 of file itkMixtureModelComponentBase.h.

template<typename TSample >

typedef TSample::MeasurementVectorSizeType itk::Statistics::MixtureModelComponentBase< TSample >::MeasurementVectorSizeType

Definition at line 70 of file itkMixtureModelComponentBase.h.

template<typename TSample >

typedef TSample::MeasurementVectorType itk::Statistics::MixtureModelComponentBase< TSample >::MeasurementVectorType

Definition at line 67 of file itkMixtureModelComponentBase.h.

template<typename TSample >

typedef MembershipFunctionBase< MeasurementVectorType > itk::Statistics::MixtureModelComponentBase< TSample >::MembershipFunctionType

typedef for the MembershipFunctionBase

Definition at line 74 of file itkMixtureModelComponentBase.h.

template<typename TSample >

typedef Array< double > itk::Statistics::MixtureModelComponentBase< TSample >::ParametersType

Definition at line 79 of file itkMixtureModelComponentBase.h.

template<typename TSample >

typedef SmartPointer< Self > itk::Statistics::MixtureModelComponentBase< TSample >::Pointer

Definition at line 63 of file itkMixtureModelComponentBase.h.

template<typename TSample >

typedef MixtureModelComponentBase itk::Statistics::MixtureModelComponentBase< TSample >::Self

Standard class typedefs.

Definition at line 61 of file itkMixtureModelComponentBase.h.

template<typename TSample >

typedef Object itk::Statistics::MixtureModelComponentBase< TSample >::Superclass

Definition at line 62 of file itkMixtureModelComponentBase.h.

template<typename TSample >

typedef Array< double > itk::Statistics::MixtureModelComponentBase< TSample >::WeightArrayType

typedef of strorage for the weights

Definition at line 77 of file itkMixtureModelComponentBase.h.

Constructor & Destructor Documentation

template<typename TSample >

itk::Statistics::MixtureModelComponentBase< TSample >::MixtureModelComponentBase ( )

protected

template<typename TSample >

virtual itk::Statistics::MixtureModelComponentBase< TSample >::~MixtureModelComponentBase ( )

protectedvirtual

Member Function Documentation

template<typename TSample >

void itk::Statistics::MixtureModelComponentBase< TSample >::AreParametersModified ( bool flag )

sets the parameters modified tag. if one or more of the membership funtion's parameters are changed, then flag should be true

template<typename TSample >

bool itk::Statistics::MixtureModelComponentBase< TSample >::AreParametersModified ( )

returns the value of parameter modified tag

template<typename TSample >

double itk::Statistics::MixtureModelComponentBase< TSample >::Evaluate ( MeasurementVectorType & measurements )

returns the membership score of the "measurements" vector

template<typename TSample >

virtual void itk::Statistics::MixtureModelComponentBase< TSample >::GenerateData ( )

protectedpure virtual

Implemented in itk::Statistics::GaussianMixtureModelComponent< TSample >.

template<typename TSample >

virtual ParametersType itk::Statistics::MixtureModelComponentBase< TSample >::GetFullParameters ( )

inlinevirtual

Definition at line 105 of file itkMixtureModelComponentBase.h.

References itk::Statistics::MixtureModelComponentBase< TSample >::m_Parameters.

template<typename TSample >

MembershipFunctionType* itk::Statistics::MixtureModelComponentBase< TSample >::GetMembershipFunction ( )

returns the pointer to the membership function object. Subclasses of this class are responsible for creating the actual membership function objects and cast them to MembershipFunctionBase objects

template<typename TSample >

double itk::Statistics::MixtureModelComponentBase< TSample >::GetMinimalParametersChange ( )

inline

Definition at line 98 of file itkMixtureModelComponentBase.h.

References itk::Statistics::MixtureModelComponentBase< TSample >::m_MinimalParametersChange.

template<typename TSample >

virtual const char* itk::Statistics::MixtureModelComponentBase< TSample >::GetNameOfClass ( ) const

virtual

Standard Macros

Reimplemented from itk::Object.

Reimplemented in itk::Statistics::GaussianMixtureModelComponent< TSample >.

template<typename TSample >

const TSample* itk::Statistics::MixtureModelComponentBase< TSample >::GetSample ( ) const

returns the sample pointer

template<typename TSample >

double itk::Statistics::MixtureModelComponentBase< TSample >::GetWeight ( unsigned int index ) const

returns the index-th weight

template<typename TSample >

virtual const WeightArrayType& itk::Statistics::MixtureModelComponentBase< TSample >::GetWeights ( ) const

virtual

returns the pointer to the weights array

template<typename TSample >

virtual void itk::Statistics::MixtureModelComponentBase< TSample >::PrintSelf	(	std::ostream &	os,
		Indent	indent
	)		const

protectedvirtual

Methods invoked by Print() to print information about the object including superclasses. Typically not called by the user (use Print() instead) but used in the hierarchical print process to combine the output of several classes.

Reimplemented from itk::Object.

Reimplemented in itk::Statistics::GaussianMixtureModelComponent< TSample >.

template<typename TSample >

void itk::Statistics::MixtureModelComponentBase< TSample >::SetMembershipFunction ( MembershipFunctionType * function )

protected

stores the pointer to the membership function. subclasses use this function to store their membership function object after dynamic creation

template<typename TSample >

void itk::Statistics::MixtureModelComponentBase< TSample >::SetMinimalParametersChange ( double change )

inline

Definition at line 93 of file itkMixtureModelComponentBase.h.

References itk::Statistics::MixtureModelComponentBase< TSample >::m_MinimalParametersChange.

template<typename TSample >