ITK  4.6.0
Insight Segmentation and Registration Toolkit
itkBioGene.h
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18 #ifndef __itkBioGene_h
19 #define __itkBioGene_h
20 
21 
22 #include <string>
23 #include <vector>
24 #include <map>
25 #include "itkMacro.h"
26 
27 namespace itk
28 {
29 namespace bio
30 {
42 class Gene
43 {
44 public:
45  typedef std::string NameType;
46  typedef std::string DomainType;
47  typedef double AffinityType;
48  typedef std::map< DomainType, AffinityType > ProteinDomainsType;
49 
50  typedef struct {
52  bool m_Type;
54 
55  typedef std::vector< ControlDomainType > GeneControlDomainsType;
56 
57 public:
58  Gene();
59  virtual ~Gene();
60 
61  void Copy(const Gene & genome);
62 
64  void SetName(const NameType & name);
65 
66  void SetName(const char *name);
67 
68  const char * GetName() const;
69 
75  void AddProteinDomain(const DomainType & domain, AffinityType affinity);
76 
80  void AddGeneControlDomain(const DomainType & domain, bool type);
81 
82 private:
86 };
87 } // end namespace bio
88 } // end namespace itk
89 
90 #endif
void SetName(const NameType &name)
virtual ~Gene()
NameType m_Name
Definition: itkBioGene.h:83
*brief Mask an image with the negative of a mask **This class is templated over the types of the *input image type
void AddGeneControlDomain(const DomainType &domain, bool type)
std::vector< ControlDomainType > GeneControlDomainsType
Definition: itkBioGene.h:55
This class implements the abstraction of a biological gene.
Definition: itkBioGene.h:42
const char * GetName() const
ProteinDomainsType m_ProteinDomains
Definition: itkBioGene.h:85
std::string DomainType
Definition: itkBioGene.h:46
std::string NameType
Definition: itkBioGene.h:45
void Copy(const Gene &genome)
double AffinityType
Definition: itkBioGene.h:47
std::map< DomainType, AffinityType > ProteinDomainsType
Definition: itkBioGene.h:48
GeneControlDomainsType m_ControlDomains
Definition: itkBioGene.h:84
void AddProteinDomain(const DomainType &domain, AffinityType affinity)