itkParticleSwarmOptimizerBase.h

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/*=========================================================================
 *
 *  Copyright Insight Software Consortium
 *
 *  Licensed under the Apache License, Version 2.0 (the "License");
 *  you may not use this file except in compliance with the License.
 *  You may obtain a copy of the License at
 *
 *         http://www.apache.org/licenses/LICENSE-2.0.txt
 *
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 *  distributed under the License is distributed on an "AS IS" BASIS,
 *  WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
 *  See the License for the specific language governing permissions and
 *  limitations under the License.
 *
 *=========================================================================*/

#ifndef __itkParticleSwarmOptimizerBase_h
#define __itkParticleSwarmOptimizerBase_h

#include "itkSingleValuedNonLinearOptimizer.h"
#include "itkMersenneTwisterRandomVariateGenerator.h"

namespace itk
{
class ParticleSwarmOptimizerBase :
  public SingleValuedNonLinearOptimizer
{
public:
  typedef ParticleSwarmOptimizerBase          Self;
  typedef SingleValuedNonLinearOptimizer      Superclass;
  typedef SmartPointer<Self>                  Pointer;
  typedef SmartPointer<const Self>            ConstPointer;

  itkTypeMacro( ParticleSwarmOptimizerBase, SingleValuedNonLinearOptimizer )

  typedef std::vector< std::pair<ParametersType::ValueType,
                                 ParametersType::ValueType> > ParameterBoundsType;

  struct ParticleData
  {
    ParametersType m_CurrentParameters;
    ParametersType m_CurrentVelocity;
    CostFunctionType::MeasureType m_CurrentValue;
    ParametersType m_BestParameters;
    CostFunctionType::MeasureType m_BestValue;
  };

  typedef std::vector<ParticleData>         SwarmType;
  typedef unsigned int                      NumberOfIterationsType;
  typedef unsigned int                      NumberOfParticlesType;
  typedef unsigned int                      NumberOfGenerationsType;
  typedef CostFunctionType::MeasureType     MeasureType;
  typedef ParametersType::ValueType         ValueType;
  typedef Statistics::MersenneTwisterRandomVariateGenerator
                                            RandomVariateGeneratorType;

  itkSetMacro( InitializeNormalDistribution, bool )
  itkGetMacro( InitializeNormalDistribution, bool )
  itkBooleanMacro( InitializeNormalDistribution )

  void SetInitialSwarm( const SwarmType &initialSwarm );
  void ClearSwarm();

  itkSetMacro( PrintSwarm, bool )
  itkGetMacro( PrintSwarm, bool )
  itkBooleanMacro( PrintSwarm )

  virtual void StartOptimization( void ) ITK_OVERRIDE;


  void SetNumberOfParticles( NumberOfParticlesType n );
  itkGetMacro( NumberOfParticles, NumberOfParticlesType )

  itkSetMacro( MaximalNumberOfIterations, NumberOfIterationsType )
  itkGetMacro( MaximalNumberOfIterations, NumberOfIterationsType )

  itkSetMacro( NumberOfGenerationsWithMinimalImprovement, NumberOfGenerationsType )
  itkGetMacro( NumberOfGenerationsWithMinimalImprovement, NumberOfGenerationsType )

  virtual void SetParameterBounds( ParameterBoundsType & bounds );
  void SetParameterBounds( std::pair<ParametersType::ValueType,
                           ParametersType::ValueType> &bounds,
                           unsigned int n );

  ParameterBoundsType GetParameterBounds() const;

  itkSetMacro( FunctionConvergenceTolerance, MeasureType )
  itkGetMacro( FunctionConvergenceTolerance, MeasureType )

  void SetParametersConvergenceTolerance( ValueType convergenceTolerance,
                                          unsigned int sz );
  itkSetMacro( ParametersConvergenceTolerance, ParametersType )
  itkGetMacro( ParametersConvergenceTolerance, ParametersType )
  itkGetMacro( PercentageParticlesConverged, double )
  itkSetMacro( PercentageParticlesConverged, double )

  itkSetMacro( Seed, RandomVariateGeneratorType::IntegerType)
  itkGetMacro( Seed, RandomVariateGeneratorType::IntegerType)

  itkSetMacro( UseSeed, bool )
  itkGetMacro( UseSeed, bool )
  itkBooleanMacro( UseSeed)

  MeasureType GetValue() const;

  virtual const std::string GetStopConditionDescription() const ITK_OVERRIDE;

  void PrintSwarm( std::ostream& os, Indent indent ) const;

protected:
  ParticleSwarmOptimizerBase();
  virtual ~ParticleSwarmOptimizerBase();
  virtual void PrintSelf( std::ostream& os, Indent indent ) const ITK_OVERRIDE;
  void PrintParamtersType(  const ParametersType& x, std::ostream& os ) const;

  virtual void UpdateSwarm() = 0;

  ParticleSwarmOptimizerBase( const Self& ); //purposely not implemented
  void operator=( const Self& );//purposely not implemented

  virtual void ValidateSettings();

  virtual void Initialize();

  void RandomInitialization();
  void FileInitialization();

  bool                                         m_PrintSwarm;
  std::ostringstream                           m_StopConditionDescription;
  bool                                         m_InitializeNormalDistribution;
  NumberOfParticlesType                        m_NumberOfParticles;
  NumberOfIterationsType                       m_MaximalNumberOfIterations;
  NumberOfGenerationsType                      m_NumberOfGenerationsWithMinimalImprovement;
  ParameterBoundsType                          m_ParameterBounds;
  ParametersType                               m_ParametersConvergenceTolerance;
  double                                       m_PercentageParticlesConverged;
  CostFunctionType::MeasureType                m_FunctionConvergenceTolerance;
  std::vector<ParticleData>                    m_Particles;
  CostFunctionType::MeasureType                m_FunctionBestValue;
  std::vector<MeasureType>                     m_FunctionBestValueMemory;
  ParametersType                               m_ParametersBestValue;
  NumberOfIterationsType                       m_IterationIndex;
  RandomVariateGeneratorType::IntegerType      m_Seed;
  bool                                         m_UseSeed;
};
} // end namespace itk

#endif