Detailed Description

This class implements the minimal behavior of a biological cell.

The basic behavior of a cell is related to the cell cycle. Geometrical concepts like size and shape are also managed by this abstract cell.

Definition at line 39 of file itkBioCell.h.

Public Types
typedef itk::Point< double, NSpaceDimension >	PointType

typedef CellBase	Superclass

typedef itk::Vector< double, NSpaceDimension >	VectorType

Public Types inherited from itk::bio::CellBase
enum	CellCycleState { M = 1UL, Gap1, S, Gap2, Gap0, Apop }

typedef itk::RGBPixel< float >	ColorType

typedef GenomeType::GeneIdType	GeneIdType

typedef itk::bio::Genome	GenomeType

typedef itk::IdentifierType	IdentifierType

Public Member Functions
virtual void	AddForce (const VectorType &force)

virtual void	AdvanceTimeStep ()

virtual void	Apoptosis (void) override

virtual void	ClearForce ()

virtual CellularAggregateBase *	GetCellularAggregate ()

virtual const CellularAggregateBase *	GetCellularAggregate () const

virtual const VectorType &	GetForce () const

virtual void	Mitosis ()

virtual void	ReceptorsReading ()

virtual void	SetCellularAggregate (CellularAggregateBase *)

virtual	~Cell ()

Public Member Functions inherited from itk::bio::CellBase
virtual ColorType	GetColor () const

IdentifierType	GetParentIdentifier () const

double	GetRadius () const

IdentifierType	GetSelfIdentifier () const

virtual bool	MarkedForRemoval () const

Static Public Member Functions
static Cell *	CreateEgg ()

static unsigned int	GetDimension ()

static const char *	GetSpeciesName (void)

Static Public Member Functions inherited from itk::bio::CellBase
static SizeValueType	GetDivisionMaximumLatencyTime ()

static SizeValueType	GetGrowthMaximumLatencyTime ()

static double	GetGrowthRadiusLimit ()

static void	Initialize ()

static void	ResetCounter ()

static void	SetChemoAttractantHighThreshold (double)

static void	SetChemoAttractantLowThreshold (double)

static void	SetDefaultColor (const ColorType &color)

static void	SetDefaultRadius (double)

static void	SetDivisionMaximumLatencyTime (SizeValueType)

static void	SetEnergySelfRepairLevel (double)

static void	SetGrowthMaximumLatencyTime (SizeValueType latency)

static void	SetGrowthRadiusIncrement (double)

static void	SetGrowthRadiusLimit (double)

static void	SetMaximumGenerationLimit (SizeValueType)

static void	SetNutrientSelfRepairLevel (double)

Protected Member Functions
	Cell ()

Protected Member Functions inherited from itk::bio::CellBase
	CellBase ()

virtual bool	CheckPointApoptosis ()

virtual bool	CheckPointDNAReplication ()

virtual bool	CheckPointGrowth ()

virtual bool	CheckPointMitosis ()

virtual void	ComputeGeneNetwork ()

virtual void	DNAReplication ()

virtual void	EnergyIntake ()

virtual void	Grow ()

void	MarkForRemoval ()

virtual void	NutrientsIntake ()

virtual void	SecreteProducts ()

virtual	~CellBase ()

Protected Attributes
CellularAggregateBase *	m_Aggregate

VectorType	m_Force

Protected Attributes inherited from itk::bio::CellBase
double	m_ChemoAttractantLevel

ColorType	m_Color

CellCycleState	m_CycleState

SizeValueType	m_DivisionLatencyTime

double	m_EnergyReserveLevel

SizeValueType	m_Generation

GenomeType *	m_Genome

GenomeType *	m_GenomeCopy

SizeValueType	m_GrowthLatencyTime

bool	m_MarkedForRemoval

double	m_NutrientsReserveLevel

IdentifierType	m_ParentIdentifier

double	m_Pressure

double	m_Radius

bool	m_ScheduleApoptosis

IdentifierType	m_SelfIdentifier

Additional Inherited Members
Static Protected Attributes inherited from itk::bio::CellBase
static GeneIdType	BlueGene

static GeneIdType	Caspase

static GeneIdType	Cdk2E

static double	ChemoAttractantHighThreshold

static double	ChemoAttractantLowThreshold

static SizeValueType	Counter

static ColorType	DefaultColor

static double	DefaultEnergyIntake

static double	DefaultNutrientsIntake

static double	DefaultRadius

static SizeValueType	DivisionMaximumLatencyTime

static double	EnergySelfRepairLevel

static GeneIdType	GreenGene

static SizeValueType	GrowthMaximumLatencyTime

static double	GrowthRadiusIncrement

static double	GrowthRadiusLimit

static ColorType	HopefullColor

static SizeValueType	MaximumGenerationLimit

static double	NutrientSelfRepairLevel

static GeneIdType	Pressurin

static GeneIdType	RedGene

static ColorType	StarvingColor

static ColorType	WellNourishedColor