ITK  5.0.0
Insight Segmentation and Registration Toolkit
Public Types | Public Member Functions | Static Public Member Functions | Static Public Attributes | Protected Member Functions | Private Attributes | List of all members
itk::CovarianceImageFunction< TInputImage, TCoordRep > Class Template Reference

#include <itkCovarianceImageFunction.h>

+ Inheritance diagram for itk::CovarianceImageFunction< TInputImage, TCoordRep >:
+ Collaboration diagram for itk::CovarianceImageFunction< TInputImage, TCoordRep >:

Detailed Description

template<typename TInputImage, typename TCoordRep = float>
class itk::CovarianceImageFunction< TInputImage, TCoordRep >

Calculate the covariance matrix in the neighborhood of a pixel in a Vector image.

Calculate the covariance matrix over the standard 8, 26, etc. connected neighborhood. This calculation uses a ZeroFluxNeumannBoundaryCondition.

If called with a ContinuousIndex or Point, the calculation is performed at the nearest neighbor.

This class is templated over the input image type and the coordinate representation type (e.g. float or double).

See Also
VectorMeanImageFunction

Definition at line 45 of file itkCovarianceImageFunction.h.

Public Types

using ConstPointer = SmartPointer< const Self >
 
using ContinuousIndexType = typename Superclass::ContinuousIndexType
 
using IndexType = typename Superclass::IndexType
 
using InputImageType = TInputImage
 
using OutputType = typename Superclass::OutputType
 
using Pointer = SmartPointer< Self >
 
using PointType = typename Superclass::PointType
 
using RealType = vnl_matrix< typename NumericTraits< typename InputImageType::PixelType::ValueType >::RealType >
 
using Self = CovarianceImageFunction
 
using Superclass = ImageFunction< TInputImage, vnl_matrix< typename NumericTraits< typename TInputImage::PixelType::ValueType >::RealType >, TCoordRep >
 
- Public Types inherited from itk::ImageFunction< TInputImage, vnl_matrix< NumericTraits< TInputImage::PixelType::ValueType >::RealType >, TCoordRep >
using ConstPointer = SmartPointer< const Self >
 
using ContinuousIndexType = ContinuousIndex< TCoordRep, Self::ImageDimension >
 
using CoordRepType = TCoordRep
 
using IndexType = typename InputImageType::IndexType
 
using IndexValueType = typename InputImageType::IndexValueType
 
using InputImageConstPointer = typename InputImageType::ConstPointer
 
using InputImageType = TInputImage
 
using InputPixelType = typename InputImageType::PixelType
 
using OutputType = vnl_matrix< NumericTraits< TInputImage::PixelType::ValueType >::RealType >
 
using Pointer = SmartPointer< Self >
 
using PointType = Point< TCoordRep, Self::ImageDimension >
 
using Self = ImageFunction
 
using Superclass = FunctionBase< Point< TCoordRep, Self::ImageDimension >, vnl_matrix< NumericTraits< TInputImage::PixelType::ValueType >::RealType > >
 
- Public Types inherited from itk::FunctionBase< Point< TCoordRep, TInputImage::ImageDimension >, vnl_matrix< NumericTraits< TInputImage::PixelType::ValueType >::RealType > >
using ConstPointer = SmartPointer< const Self >
 
using InputType = Point< TCoordRep, TInputImage::ImageDimension >
 
using OutputType = vnl_matrix< NumericTraits< TInputImage::PixelType::ValueType >::RealType >
 
using Pointer = SmartPointer< Self >
 
using Self = FunctionBase
 
using Superclass = Object
 
- Public Types inherited from itk::Object
using ConstPointer = SmartPointer< const Self >
 
using Pointer = SmartPointer< Self >
 
using Self = Object
 
using Superclass = LightObject
 
- Public Types inherited from itk::LightObject
using ConstPointer = SmartPointer< const Self >
 
using Pointer = SmartPointer< Self >
 
using Self = LightObject
 

Public Member Functions

virtual ::itk::LightObject::Pointer CreateAnother () const
 
RealType Evaluate (const PointType &point) const override
 
RealType EvaluateAtContinuousIndex (const ContinuousIndexType &cindex) const override
 
RealType EvaluateAtIndex (const IndexType &index) const override
 
virtual const char * GetNameOfClass () const
 
virtual void SetNeighborhoodRadius (unsigned int _arg)
 
virtual const unsigned int & GetNeighborhoodRadius () const
 
- Public Member Functions inherited from itk::ImageFunction< TInputImage, vnl_matrix< NumericTraits< TInputImage::PixelType::ValueType >::RealType >, TCoordRep >
void ConvertContinuousIndexToNearestIndex (const ContinuousIndexType &cindex, IndexType &index) const
 
void ConvertPointToContinuousIndex (const PointType &point, ContinuousIndexType &cindex) const
 
void ConvertPointToNearestIndex (const PointType &point, IndexType &index) const
 
vnl_matrix< NumericTraits
< TInputImage::PixelType::ValueType >
::RealType > 
Evaluate (const PointType &point) const override=0
 
virtual vnl_matrix
< NumericTraits
< TInputImage::PixelType::ValueType >
::RealType > 
EvaluateAtContinuousIndex (const ContinuousIndexType &index) const =0
 
virtual vnl_matrix
< NumericTraits
< TInputImage::PixelType::ValueType >
::RealType > 
EvaluateAtIndex (const IndexType &index) const =0
 
virtual const ContinuousIndexTypeGetEndContinuousIndex () const
 
virtual const IndexTypeGetEndIndex () const
 
const InputImageTypeGetInputImage () const
 
virtual const ContinuousIndexTypeGetStartContinuousIndex () const
 
virtual const IndexTypeGetStartIndex () const
 
virtual void SetInputImage (const InputImageType *ptr)
 
virtual bool IsInsideBuffer (const IndexType &index) const
 
virtual bool IsInsideBuffer (const ContinuousIndexType &index) const
 
virtual bool IsInsideBuffer (const PointType &point) const
 
- Public Member Functions inherited from itk::Object
unsigned long AddObserver (const EventObject &event, Command *)
 
unsigned long AddObserver (const EventObject &event, Command *) const
 
virtual void DebugOff () const
 
virtual void DebugOn () const
 
CommandGetCommand (unsigned long tag)
 
bool GetDebug () const
 
MetaDataDictionaryGetMetaDataDictionary ()
 
const MetaDataDictionaryGetMetaDataDictionary () const
 
virtual ModifiedTimeType GetMTime () const
 
virtual const TimeStampGetTimeStamp () const
 
bool HasObserver (const EventObject &event) const
 
void InvokeEvent (const EventObject &)
 
void InvokeEvent (const EventObject &) const
 
virtual void Modified () const
 
void Register () const override
 
void RemoveAllObservers ()
 
void RemoveObserver (unsigned long tag)
 
void SetDebug (bool debugFlag) const
 
void SetReferenceCount (int) override
 
void UnRegister () const noexceptoverride
 
void SetMetaDataDictionary (const MetaDataDictionary &rhs)
 
void SetMetaDataDictionary (MetaDataDictionary &&rrhs)
 
virtual void SetObjectName (std::string _arg)
 
virtual const std::string & GetObjectName () const
 
- Public Member Functions inherited from itk::LightObject
virtual void Delete ()
 
virtual int GetReferenceCount () const
 
 itkCloneMacro (Self)
 
void Print (std::ostream &os, Indent indent=0) const
 

Static Public Member Functions

static Pointer New ()
 
- Static Public Member Functions inherited from itk::Object
static bool GetGlobalWarningDisplay ()
 
static void GlobalWarningDisplayOff ()
 
static void GlobalWarningDisplayOn ()
 
static Pointer New ()
 
static void SetGlobalWarningDisplay (bool flag)
 
- Static Public Member Functions inherited from itk::LightObject
static void BreakOnError ()
 
static Pointer New ()
 

Static Public Attributes

static constexpr unsigned int ImageDimension = InputImageType::ImageDimension
 
- Static Public Attributes inherited from itk::ImageFunction< TInputImage, vnl_matrix< NumericTraits< TInputImage::PixelType::ValueType >::RealType >, TCoordRep >
static constexpr unsigned int ImageDimension
 

Protected Member Functions

 CovarianceImageFunction ()
 
void PrintSelf (std::ostream &os, Indent indent) const override
 
 ~CovarianceImageFunction () override=default
 
- Protected Member Functions inherited from itk::ImageFunction< TInputImage, vnl_matrix< NumericTraits< TInputImage::PixelType::ValueType >::RealType >, TCoordRep >
 ImageFunction ()
 
void PrintSelf (std::ostream &os, Indent indent) const override
 
 ~ImageFunction () override=default
 
- Protected Member Functions inherited from itk::FunctionBase< Point< TCoordRep, TInputImage::ImageDimension >, vnl_matrix< NumericTraits< TInputImage::PixelType::ValueType >::RealType > >
 FunctionBase ()=default
 
 ~FunctionBase () override=default
 
- Protected Member Functions inherited from itk::Object
 Object ()
 
bool PrintObservers (std::ostream &os, Indent indent) const
 
virtual void SetTimeStamp (const TimeStamp &time)
 
 ~Object () override
 
- Protected Member Functions inherited from itk::LightObject
virtual LightObject::Pointer InternalClone () const
 
 LightObject ()
 
virtual void PrintHeader (std::ostream &os, Indent indent) const
 
virtual void PrintTrailer (std::ostream &os, Indent indent) const
 
virtual ~LightObject ()
 

Private Attributes

unsigned int m_NeighborhoodRadius { 1 }
 

Additional Inherited Members

- Protected Attributes inherited from itk::ImageFunction< TInputImage, vnl_matrix< NumericTraits< TInputImage::PixelType::ValueType >::RealType >, TCoordRep >
ContinuousIndexType m_EndContinuousIndex
 
IndexType m_EndIndex
 
InputImageConstPointer m_Image
 
ContinuousIndexType m_StartContinuousIndex
 
IndexType m_StartIndex
 
- Protected Attributes inherited from itk::LightObject
std::atomic< int > m_ReferenceCount
 

Member Typedef Documentation

template<typename TInputImage , typename TCoordRep = float>
using itk::CovarianceImageFunction< TInputImage, TCoordRep >::ConstPointer = SmartPointer< const Self >

Definition at line 62 of file itkCovarianceImageFunction.h.

template<typename TInputImage , typename TCoordRep = float>
using itk::CovarianceImageFunction< TInputImage, TCoordRep >::ContinuousIndexType = typename Superclass::ContinuousIndexType

ContinuousIndex type alias support

Definition at line 80 of file itkCovarianceImageFunction.h.

template<typename TInputImage , typename TCoordRep = float>
using itk::CovarianceImageFunction< TInputImage, TCoordRep >::IndexType = typename Superclass::IndexType

Index type alias support

Definition at line 77 of file itkCovarianceImageFunction.h.

template<typename TInputImage , typename TCoordRep = float>
using itk::CovarianceImageFunction< TInputImage, TCoordRep >::InputImageType = TInputImage

InputImageType type alias support

Definition at line 71 of file itkCovarianceImageFunction.h.

template<typename TInputImage , typename TCoordRep = float>
using itk::CovarianceImageFunction< TInputImage, TCoordRep >::OutputType = typename Superclass::OutputType

OutputType typdef support.

Definition at line 74 of file itkCovarianceImageFunction.h.

template<typename TInputImage , typename TCoordRep = float>
using itk::CovarianceImageFunction< TInputImage, TCoordRep >::Pointer = SmartPointer< Self >

Definition at line 61 of file itkCovarianceImageFunction.h.

template<typename TInputImage , typename TCoordRep = float>
using itk::CovarianceImageFunction< TInputImage, TCoordRep >::PointType = typename Superclass::PointType

Point type alias support

Definition at line 83 of file itkCovarianceImageFunction.h.

template<typename TInputImage , typename TCoordRep = float>
using itk::CovarianceImageFunction< TInputImage, TCoordRep >::RealType = vnl_matrix<typename NumericTraits<typename InputImageType::PixelType::ValueType>::RealType>

Datatype used for the covariance matrix

Definition at line 89 of file itkCovarianceImageFunction.h.

template<typename TInputImage , typename TCoordRep = float>
using itk::CovarianceImageFunction< TInputImage, TCoordRep >::Self = CovarianceImageFunction

Standard class type aliases.

Definition at line 55 of file itkCovarianceImageFunction.h.

template<typename TInputImage , typename TCoordRep = float>
using itk::CovarianceImageFunction< TInputImage, TCoordRep >::Superclass = ImageFunction< TInputImage, vnl_matrix< typename NumericTraits< typename TInputImage::PixelType::ValueType >::RealType >, TCoordRep >

Definition at line 59 of file itkCovarianceImageFunction.h.

Constructor & Destructor Documentation

template<typename TInputImage , typename TCoordRep = float>
itk::CovarianceImageFunction< TInputImage, TCoordRep >::CovarianceImageFunction ( )
protected
template<typename TInputImage , typename TCoordRep = float>
itk::CovarianceImageFunction< TInputImage, TCoordRep >::~CovarianceImageFunction ( )
overrideprotecteddefault

Member Function Documentation

template<typename TInputImage , typename TCoordRep = float>
virtual::itk::LightObject::Pointer itk::CovarianceImageFunction< TInputImage, TCoordRep >::CreateAnother ( ) const
virtual

Create an object from an instance, potentially deferring to a factory. This method allows you to create an instance of an object that is exactly the same type as the referring object. This is useful in cases where an object has been cast back to a base class.

Reimplemented from itk::Object.

template<typename TInputImage , typename TCoordRep = float>
RealType itk::CovarianceImageFunction< TInputImage, TCoordRep >::Evaluate ( const PointType point) const
inlineoverride

Evaluate the function at non-integer positions

Definition at line 95 of file itkCovarianceImageFunction.h.

template<typename TInputImage , typename TCoordRep = float>
RealType itk::CovarianceImageFunction< TInputImage, TCoordRep >::EvaluateAtContinuousIndex ( const ContinuousIndexType cindex) const
inlineoverride

Definition at line 103 of file itkCovarianceImageFunction.h.

template<typename TInputImage , typename TCoordRep = float>
RealType itk::CovarianceImageFunction< TInputImage, TCoordRep >::EvaluateAtIndex ( const IndexType index) const
override

Evalulate the function at specified index

template<typename TInputImage , typename TCoordRep = float>
virtual const char* itk::CovarianceImageFunction< TInputImage, TCoordRep >::GetNameOfClass ( ) const
virtual
template<typename TInputImage , typename TCoordRep = float>
virtual const unsigned int& itk::CovarianceImageFunction< TInputImage, TCoordRep >::GetNeighborhoodRadius ( ) const
virtual

Get/Set the radius of the neighborhood over which the statistics are evaluated.

template<typename TInputImage , typename TCoordRep = float>
static Pointer itk::CovarianceImageFunction< TInputImage, TCoordRep >::New ( )
static

Method for creation through the object factory.

template<typename TInputImage , typename TCoordRep = float>
void itk::CovarianceImageFunction< TInputImage, TCoordRep >::PrintSelf ( std::ostream &  os,
Indent  indent 
) const
overrideprotectedvirtual

Methods invoked by Print() to print information about the object including superclasses. Typically not called by the user (use Print() instead) but used in the hierarchical print process to combine the output of several classes.

Reimplemented from itk::Object.

template<typename TInputImage , typename TCoordRep = float>
virtual void itk::CovarianceImageFunction< TInputImage, TCoordRep >::SetNeighborhoodRadius ( unsigned int  _arg)
virtual

Get/Set the radius of the neighborhood over which the statistics are evaluated.

Member Data Documentation

template<typename TInputImage , typename TCoordRep = float>
constexpr unsigned int itk::CovarianceImageFunction< TInputImage, TCoordRep >::ImageDimension = InputImageType::ImageDimension
static

Dimension of the underlying image.

Definition at line 86 of file itkCovarianceImageFunction.h.

template<typename TInputImage , typename TCoordRep = float>
unsigned int itk::CovarianceImageFunction< TInputImage, TCoordRep >::m_NeighborhoodRadius { 1 }
private

Definition at line 124 of file itkCovarianceImageFunction.h.


The documentation for this class was generated from the following file: