ITK  5.0.0
Insight Segmentation and Registration Toolkit
Public Types | Public Member Functions | Static Public Member Functions | Static Public Attributes | Protected Member Functions | Protected Attributes | List of all members
itk::ScalarChanAndVeseDenseLevelSetImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TSharedData > Class Template Reference

#include <itkScalarChanAndVeseDenseLevelSetImageFilter.h>

+ Inheritance diagram for itk::ScalarChanAndVeseDenseLevelSetImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TSharedData >:
+ Collaboration diagram for itk::ScalarChanAndVeseDenseLevelSetImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TSharedData >:

Detailed Description

template<typename TInputImage, typename TFeatureImage, typename TOutputImage, typename TFunction = ScalarChanAndVeseLevelSetFunction< TInputImage, TFeatureImage >, class TSharedData = typename TFunction::SharedDataType>
class itk::ScalarChanAndVeseDenseLevelSetImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TSharedData >

Dense implementation of the Chan and Vese multiphase level set image filter.

This code was adapted from the paper:

   "An active contour model without edges"
    T. Chan and L. Vese.
    In Scale-Space Theories in Computer Vision, pages 141-151, 1999.
Author
Mosaliganti K., Smith B., Gelas A., Gouaillard A., Megason S.

This code was taken from the Insight Journal paper:

"Cell Tracking using Coupled Active Surfaces for Nuclei and Membranes"
http://www.insight-journal.org/browse/publication/642
https://hdl.handle.net/10380/3055

That is based on the papers:

"Level Set Segmentation: Active Contours without edge"
http://www.insight-journal.org/browse/publication/322
https://hdl.handle.net/1926/1532

and

"Level set segmentation using coupled active surfaces"
http://www.insight-journal.org/browse/publication/323
https://hdl.handle.net/1926/1533
Wiki Examples:

Definition at line 65 of file itkScalarChanAndVeseDenseLevelSetImageFilter.h.

Public Types

using ConstPointer = SmartPointer< const Self >
 
using FeatureImagePointer = typename FeatureImageType::Pointer
 
using FeatureImageType = TFeatureImage
 
using FeatureIndexType = typename FeatureImageType::IndexType
 
using FeatureIndexValueType = typename FeatureIndexType::IndexValueType
 
using FeaturePixelType = typename FeatureImageType::PixelType
 
using FeatureRegionType = typename FeatureImageType::RegionType
 
using FiniteDifferenceFunctionType = typename Superclass::FiniteDifferenceFunctionType
 
using FunctionPointer = typename FunctionType::Pointer
 
using FunctionType = TFunction
 
using IndexType = typename OutputImageType::IndexType
 
using InputImagePointer = typename Superclass::InputImagePointer
 
using InputImageType = typename Superclass::InputImageType
 
using InputPointType = typename Superclass::InputPointType
 
using InputSpacingType = typename InputImageType::SpacingType
 
using OutputImageType = TOutputImage
 
using OutputPixelType = typename OutputImageType::PixelType
 
using Pointer = SmartPointer< Self >
 
using ROIFilterPointer = typename ROIFilterType::Pointer
 
using ROIFilterType = RegionOfInterestImageFilter< FeatureImageType, FeatureImageType >
 
using Self = ScalarChanAndVeseDenseLevelSetImageFilter
 
using SharedDataPointer = typename SharedDataType::Pointer
 
using SharedDataType = TSharedData
 
using Superclass = MultiphaseDenseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction >
 
using TimeStepType = typename Superclass::TimeStepType
 
using ValueType = typename Superclass::ValueType
 
- Public Types inherited from itk::MultiphaseDenseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction >
using ConstPointer = SmartPointer< const Self >
 
using FaceCalculatorType = NeighborhoodAlgorithm::ImageBoundaryFacesCalculator< InputImageType >
 
using FaceListType = typename FaceCalculatorType::FaceListType
 
using FeatureImagePointer = typename Superclass::FeatureImagePointer
 
using FeatureImageType = typename Superclass::FeatureImageType
 
using FeaturePixelType = typename Superclass::FeaturePixelType
 
using FeaturePointType = typename Superclass::FeaturePointType
 
using FeatureRegionType = typename Superclass::FeatureRegionType
 
using FeatureSizeType = typename Superclass::FeatureSizeType
 
using FeatureSpacingType = typename Superclass::FeatureSpacingType
 
using FiniteDifferenceFunctionPointer = typename Superclass::FiniteDifferenceFunctionPointer
 
using FiniteDifferenceFunctionType = typename Superclass::FiniteDifferenceFunctionType
 
using IdCellType = typename Superclass::IdCellType
 
using InputImagePointer = typename Superclass::InputImagePointer
 
using InputImageType = typename Superclass::InputImageType
 
using InputIndexType = typename Superclass::InputIndexType
 
using InputIndexValueType = typename Superclass::InputIndexValueType
 
using InputPixelType = typename Superclass::InputPixelType
 
using InputPointType = typename Superclass::InputPointType
 
using InputRegionType = typename Superclass::InputRegionType
 
using InputSizeType = typename Superclass::InputSizeType
 
using InputSizeValueType = typename Superclass::InputSizeValueType
 
using InputSpacingType = typename Superclass::InputSpacingType
 
using MaurerPointer = typename MaurerType::Pointer
 
using MaurerType = SignedMaurerDistanceMapImageFilter< InputImageType, InputImageType >
 
using NeighborhoodIteratorType = typename FiniteDifferenceFunctionType::NeighborhoodType
 
using OutputImagePointer = typename Superclass::OutputImagePointer
 
using OutputImageType = typename Superclass::OutputImageType
 
using OutputIndexType = typename Superclass::OutputIndexType
 
using OutputIndexValueType = typename Superclass::OutputIndexValueType
 
using OutputPixelType = typename OutputImageType::PixelType
 
using OutputRegionType = typename Superclass::OutputRegionType
 
using OutputSizeType = typename Superclass::OutputSizeType
 
using Pointer = SmartPointer< Self >
 
using Self = MultiphaseDenseFiniteDifferenceImageFilter
 
using SizeValueType = typename Superclass::OutputSizeValueType
 
using Superclass = MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, unsigned int >
 
using ThresholdFilterPointer = typename ThresholdFilterType::Pointer
 
using ThresholdFilterType = BinaryThresholdImageFilter< InputImageType, InputImageType >
 
using TimeStepType = typename Superclass::TimeStepType
 
using ValueType = typename InputImageType::ValueType
 
- Public Types inherited from itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, unsigned int >
using CentroidVectorType = Vector< float, Self::ImageDimension >
 
using ConstPointer = SmartPointer< const Self >
 
using FeatureImagePointer = typename FeatureImageType::Pointer
 
using FeatureImageType = TFeatureImage
 
using FeaturePixelType = typename FeatureImageType::PixelType
 
using FeaturePointType = typename FeatureImageType::PointType
 
using FeatureRegionType = typename FeatureImageType::RegionType
 
using FeatureSizeType = typename FeatureImageType::SizeType
 
using FeatureSpacingType = typename FeatureImageType::SpacingType
 
using FiniteDifferenceFunctionPointer = typename FiniteDifferenceFunctionType::Pointer
 
using FiniteDifferenceFunctionType = TFunction
 
using IdCellType = unsigned int
 
using InputCoordRepType = typename InputPointType::CoordRepType
 
using InputImagePointer = typename InputImageType::Pointer
 
using InputImageType = TInputImage
 
using InputIndexType = typename InputImageType::IndexType
 
using InputIndexValueType = typename InputIndexType::IndexValueType
 
using InputOffsetValueType = typename InputImageType::OffsetValueType
 
using InputPixelType = typename InputImageType::PixelType
 
using InputPointType = typename InputImageType::PointType
 
using InputRegionType = typename InputImageType::RegionType
 
using InputSizeType = typename InputImageType::SizeType
 
using InputSizeValueType = typename InputSizeType::SizeValueType
 
using InputSpacingType = typename InputImageType::SpacingType
 
using KdTreeGeneratorPointer = typename KdTreeGeneratorType::Pointer
 
using KdTreeGeneratorType = Statistics::KdTreeGenerator< SampleType >
 
using KdTreePointer = typename KdTreeType::Pointer
 
using KdTreeType = typename KdTreeGeneratorType::KdTreeType
 
using OutputImagePointer = typename OutputImageType::Pointer
 
using OutputImageType = TOutputImage
 
using OutputIndexType = typename OutputImageType::IndexType
 
using OutputIndexValueType = typename OutputImageType::IndexValueType
 
using OutputPixelType = typename OutputImageType::PixelType
 
using OutputRegionType = typename OutputImageType::RegionType
 
using OutputSizeType = typename OutputImageType::SizeType
 
using OutputSizeValueType = typename OutputImageType::SizeValueType
 
using Pointer = SmartPointer< Self >
 
using RadiusType = typename FiniteDifferenceFunctionType::RadiusType
 
using SampleType = Statistics::ListSample< CentroidVectorType >
 
using Self = MultiphaseFiniteDifferenceImageFilter
 
using Superclass = InPlaceImageFilter< TFeatureImage, TOutputImage >
 
using TimeStepType = typename FiniteDifferenceFunctionType::TimeStepType
 
using TimeStepVectorType = typename std::vector< TimeStepType >
 
using VectorIdCellType = std::vector< IdCellType >
 
- Public Types inherited from itk::InPlaceImageFilter< TFeatureImage, TOutputImage >
using ConstPointer = SmartPointer< const Self >
 
using InputImageConstPointer = typename InputImageType::ConstPointer
 
using InputImagePixelType = typename InputImageType::PixelType
 
using InputImagePointer = typename InputImageType::Pointer
 
using InputImageRegionType = typename InputImageType::RegionType
 
using InputImageType = TFeatureImage
 
using OutputImagePixelType = typename Superclass::OutputImagePixelType
 
using OutputImagePointer = typename Superclass::OutputImagePointer
 
using OutputImageRegionType = typename Superclass::OutputImageRegionType
 
using OutputImageType = typename Superclass::OutputImageType
 
using Pointer = SmartPointer< Self >
 
using Self = InPlaceImageFilter
 
using Superclass = ImageToImageFilter< TFeatureImage, TOutputImage >
 
- Public Types inherited from itk::ImageToImageFilter< TFeatureImage, TOutputImage >
using ConstPointer = SmartPointer< const Self >
 
using InputImageConstPointer = typename InputImageType::ConstPointer
 
using InputImagePixelType = typename InputImageType::PixelType
 
using InputImagePointer = typename InputImageType::Pointer
 
using InputImageRegionType = typename InputImageType::RegionType
 
using InputImageType = TFeatureImage
 
using OutputImagePixelType = typename Superclass::OutputImagePixelType
 
using OutputImageRegionType = typename Superclass::OutputImageRegionType
 
using Pointer = SmartPointer< Self >
 
using Self = ImageToImageFilter
 
using Superclass = ImageSource< TOutputImage >
 
- Public Types inherited from itk::ImageSource< TOutputImage >
using ConstPointer = SmartPointer< const Self >
 
using DataObjectIdentifierType = Superclass::DataObjectIdentifierType
 
using DataObjectPointer = DataObject::Pointer
 
using DataObjectPointerArraySizeType = Superclass::DataObjectPointerArraySizeType
 
using OutputImagePixelType = typename OutputImageType::PixelType
 
using OutputImagePointer = typename OutputImageType::Pointer
 
using OutputImageRegionType = typename OutputImageType::RegionType
 
using OutputImageType = TOutputImage
 
using Pointer = SmartPointer< Self >
 
using Self = ImageSource
 
using Superclass = ProcessObject
 
- Public Types inherited from itk::ProcessObject
using ConstPointer = SmartPointer< const Self >
 
using DataObjectIdentifierType = DataObject::DataObjectIdentifierType
 
using DataObjectPointer = DataObject::Pointer
 
using DataObjectPointerArray = std::vector< DataObjectPointer >
 
using DataObjectPointerArraySizeType = DataObjectPointerArray::size_type
 
using MultiThreaderType = MultiThreaderBase
 
using NameArray = std::vector< DataObjectIdentifierType >
 
using Pointer = SmartPointer< Self >
 
using Self = ProcessObject
 
using Superclass = Object
 
- Public Types inherited from itk::Object
using ConstPointer = SmartPointer< const Self >
 
using Pointer = SmartPointer< Self >
 
using Self = Object
 
using Superclass = LightObject
 
- Public Types inherited from itk::LightObject
using ConstPointer = SmartPointer< const Self >
 
using Pointer = SmartPointer< Self >
 
using Self = LightObject
 

Public Member Functions

virtual ::itk::LightObject::Pointer CreateAnother () const
 
virtual const char * GetNameOfClass () const
 
virtual void SetFeatureImage (const FeatureImagePointer f)
 
- Public Member Functions inherited from itk::MultiphaseDenseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction >
virtual unsigned int GetReinitializeCounter ()
 
void SetFunctionCount (const IdCellType &n)
 
virtual void SetReinitializeCounter (unsigned int _arg)
 
- Public Member Functions inherited from itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, unsigned int >
virtual const unsigned int & GetElapsedIterations () const
 
InputImagePointer GetLevelSet (const IdCellType &i)
 
virtual void SetElapsedIterations (unsigned int _arg)
 
void SetFunctionCount (const IdCellType &n)
 
void SetKdTree (KdTreeType *kdtree)
 
void SetLevelSet (const IdCellType &i, const InputImageType *levelSet)
 
void SetLookup (VectorIdCellType lookup)
 
virtual const
FiniteDifferenceFunctionPointer 
GetDifferenceFunction (const IdCellType &functionIndex) const
 
virtual void SetDifferenceFunction (const IdCellType &functionIndex, FiniteDifferenceFunctionPointer function)
 
virtual void SetNumberOfIterations (unsigned int _arg)
 
virtual const unsigned int & GetNumberOfIterations () const
 
virtual void SetUseImageSpacing (bool _arg)
 
virtual void UseImageSpacingOn ()
 
virtual void UseImageSpacingOff ()
 
virtual const bool & GetUseImageSpacing () const
 
virtual void SetMaximumRMSError (double _arg)
 
virtual const double & GetMaximumRMSError () const
 
virtual void SetRMSChange (double _arg)
 
virtual const double & GetRMSChange () const
 
virtual void SetInitializedState (bool _arg)
 
virtual const bool & GetInitializedState () const
 
virtual void InitializedStateOn ()
 
virtual void InitializedStateOff ()
 
virtual void SetManualReinitialization (bool _arg)
 
virtual const bool & GetManualReinitialization () const
 
virtual void ManualReinitializationOn ()
 
virtual void ManualReinitializationOff ()
 
- Public Member Functions inherited from itk::InPlaceImageFilter< TFeatureImage, TOutputImage >
virtual bool CanRunInPlace () const
 
virtual void SetInPlace (bool _arg)
 
virtual bool GetInPlace () const
 
virtual void InPlaceOn ()
 
virtual void InPlaceOff ()
 
- Public Member Functions inherited from itk::ImageToImageFilter< TFeatureImage, TOutputImage >
const InputImageTypeGetInput () const
 
const InputImageTypeGetInput (unsigned int idx) const
 
void PopBackInput () override
 
void PopFrontInput () override
 
virtual void PushBackInput (const InputImageType *image)
 
virtual void PushFrontInput (const InputImageType *image)
 
virtual void SetInput (const InputImageType *image)
 
virtual void SetInput (unsigned int, const TFeatureImage *image)
 
virtual void SetCoordinateTolerance (double _arg)
 
virtual double GetCoordinateTolerance () const
 
virtual void SetDirectionTolerance (double _arg)
 
virtual double GetDirectionTolerance () const
 
- Public Member Functions inherited from itk::ImageSource< TOutputImage >
OutputImageTypeGetOutput (unsigned int idx)
 
OutputImageTypeGetOutput ()
 
const OutputImageTypeGetOutput () const
 
virtual void GraftOutput (DataObject *output)
 
virtual void GraftOutput (const DataObjectIdentifierType &key, DataObject *output)
 
virtual void GraftNthOutput (unsigned int idx, DataObject *output)
 
ProcessObject::DataObjectPointer MakeOutput (ProcessObject::DataObjectPointerArraySizeType idx) override
 
ProcessObject::DataObjectPointer MakeOutput (const ProcessObject::DataObjectIdentifierType &) override
 
- Public Member Functions inherited from itk::ProcessObject
virtual void AbortGenerateDataOff ()
 
virtual void AbortGenerateDataOn ()
 
virtual void EnlargeOutputRequestedRegion (DataObject *)
 
virtual const bool & GetAbortGenerateData () const
 
DataObjectPointerArray GetIndexedInputs ()
 
DataObjectPointerArray GetIndexedOutputs ()
 
NameArray GetInputNames () const
 
DataObjectPointerArray GetInputs ()
 
MultiThreaderTypeGetMultiThreader () const
 
DataObjectPointerArraySizeType GetNumberOfIndexedInputs () const
 
DataObjectPointerArraySizeType GetNumberOfIndexedOutputs () const
 
DataObjectPointerArraySizeType GetNumberOfInputs () const
 
DataObjectPointerArraySizeType GetNumberOfOutputs () const
 
virtual
DataObjectPointerArraySizeType 
GetNumberOfValidRequiredInputs () const
 
NameArray GetOutputNames () const
 
DataObjectPointerArray GetOutputs ()
 
virtual const float & GetProgress () const
 
NameArray GetRequiredInputNames () const
 
bool HasInput (const DataObjectIdentifierType &key) const
 
bool HasOutput (const DataObjectIdentifierType &key) const
 
virtual void PrepareOutputs ()
 
virtual void PropagateRequestedRegion (DataObject *output)
 
virtual void ResetPipeline ()
 
virtual void SetAbortGenerateData (bool _arg)
 
void SetMultiThreader (MultiThreaderType *threader)
 
virtual void Update ()
 
virtual void UpdateLargestPossibleRegion ()
 
virtual void UpdateOutputData (DataObject *output)
 
virtual void UpdateOutputInformation ()
 
void UpdateProgress (float progress)
 
virtual void SetReleaseDataFlag (bool flag)
 
virtual bool GetReleaseDataFlag () const
 
void ReleaseDataFlagOn ()
 
void ReleaseDataFlagOff ()
 
virtual void SetReleaseDataBeforeUpdateFlag (bool _arg)
 
virtual const bool & GetReleaseDataBeforeUpdateFlag () const
 
virtual void ReleaseDataBeforeUpdateFlagOn ()
 
virtual void ReleaseDataBeforeUpdateFlagOff ()
 
virtual void SetNumberOfWorkUnits (ThreadIdType _arg)
 
virtual const ThreadIdTypeGetNumberOfWorkUnits () const
 
- Public Member Functions inherited from itk::Object
unsigned long AddObserver (const EventObject &event, Command *)
 
unsigned long AddObserver (const EventObject &event, Command *) const
 
virtual void DebugOff () const
 
virtual void DebugOn () const
 
CommandGetCommand (unsigned long tag)
 
bool GetDebug () const
 
MetaDataDictionaryGetMetaDataDictionary ()
 
const MetaDataDictionaryGetMetaDataDictionary () const
 
virtual ModifiedTimeType GetMTime () const
 
virtual const TimeStampGetTimeStamp () const
 
bool HasObserver (const EventObject &event) const
 
void InvokeEvent (const EventObject &)
 
void InvokeEvent (const EventObject &) const
 
virtual void Modified () const
 
void Register () const override
 
void RemoveAllObservers ()
 
void RemoveObserver (unsigned long tag)
 
void SetDebug (bool debugFlag) const
 
void SetReferenceCount (int) override
 
void UnRegister () const noexceptoverride
 
void SetMetaDataDictionary (const MetaDataDictionary &rhs)
 
void SetMetaDataDictionary (MetaDataDictionary &&rrhs)
 
virtual void SetObjectName (std::string _arg)
 
virtual const std::string & GetObjectName () const
 
- Public Member Functions inherited from itk::LightObject
virtual void Delete ()
 
virtual int GetReferenceCount () const
 
 itkCloneMacro (Self)
 
void Print (std::ostream &os, Indent indent=0) const
 

Static Public Member Functions

static Pointer New ()
 
- Static Public Member Functions inherited from itk::Object
static bool GetGlobalWarningDisplay ()
 
static void GlobalWarningDisplayOff ()
 
static void GlobalWarningDisplayOn ()
 
static Pointer New ()
 
static void SetGlobalWarningDisplay (bool flag)
 
- Static Public Member Functions inherited from itk::LightObject
static void BreakOnError ()
 
static Pointer New ()
 

Static Public Attributes

static constexpr unsigned int ImageDimension = TInputImage::ImageDimension
 
- Static Public Attributes inherited from itk::MultiphaseDenseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction >
static constexpr unsigned int ImageDimension
 
- Static Public Attributes inherited from itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, unsigned int >
static constexpr unsigned int ImageDimension
 
- Static Public Attributes inherited from itk::InPlaceImageFilter< TFeatureImage, TOutputImage >
static constexpr unsigned int InputImageDimension
 
static constexpr unsigned int OutputImageDimension
 
- Static Public Attributes inherited from itk::ImageToImageFilter< TFeatureImage, TOutputImage >
static constexpr unsigned int InputImageDimension
 
static constexpr unsigned int OutputImageDimension
 
- Static Public Attributes inherited from itk::ImageSource< TOutputImage >
static constexpr unsigned int OutputImageDimension = TOutputImage::ImageDimension
 

Protected Member Functions

void Initialize () override
 
void InitializeIteration () override
 
 ScalarChanAndVeseDenseLevelSetImageFilter ()
 
 ~ScalarChanAndVeseDenseLevelSetImageFilter () override
 
- Protected Member Functions inherited from itk::MultiphaseDenseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction >
void ApplyUpdate (TimeStepType dt) override
 
void CopyInputToOutput () override
 
 MultiphaseDenseFiniteDifferenceImageFilter ()
 
void PostProcessOutput () override
 
void PrintSelf (std::ostream &, Indent indent) const override
 
 ~MultiphaseDenseFiniteDifferenceImageFilter () override
 
- Protected Member Functions inherited from itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, unsigned int >
virtual void ApplyUpdate (TimeStepType dt)=0
 
void GenerateData () override
 
void GenerateInputRequestedRegion () override
 
virtual bool Halt ()
 
 MultiphaseFiniteDifferenceImageFilter ()
 
void PrintSelf (std::ostream &os, Indent indent) const override
 
TimeStepType ResolveTimeStep (const TimeStepVectorType &timeStepList, const std::vector< bool > &valid)
 
virtual bool ThreadedHalt (void *)
 
 ~MultiphaseFiniteDifferenceImageFilter () override
 
- Protected Member Functions inherited from itk::InPlaceImageFilter< TFeatureImage, TOutputImage >
void AllocateOutputs () override
 
virtual bool GetRunningInPlace () const
 
 InPlaceImageFilter ()=default
 
void ReleaseInputs () override
 
 ~InPlaceImageFilter () override=default
 
- Protected Member Functions inherited from itk::ImageToImageFilter< TFeatureImage, TOutputImage >
virtual void CallCopyInputRegionToOutputRegion (OutputImageRegionType &destRegion, const InputImageRegionType &srcRegion)
 
virtual void CallCopyOutputRegionToInputRegion (InputImageRegionType &destRegion, const OutputImageRegionType &srcRegion)
 
 ImageToImageFilter ()
 
void VerifyInputInformation () ITKv5_CONST override
 
 ~ImageToImageFilter () override
 
void PushBackInput (const DataObject *input) override
 
void PushFrontInput (const DataObject *input) override
 
- Protected Member Functions inherited from itk::ImageSource< TOutputImage >
virtual void AfterThreadedGenerateData ()
 
virtual void BeforeThreadedGenerateData ()
 
void ClassicMultiThread (ThreadFunctionType callbackFunction)
 
virtual const
ImageRegionSplitterBase
GetImageRegionSplitter () const
 
 ImageSource ()
 
virtual unsigned int SplitRequestedRegion (unsigned int i, unsigned int pieces, OutputImageRegionType &splitRegion)
 
 ~ImageSource () override=default
 
virtual void ThreadedGenerateData (const OutputImageRegionType &outputRegionForThread, ThreadIdType threadId)
 
virtual void DynamicThreadedGenerateData (const OutputImageRegionType &outputRegionForThread)
 
virtual bool GetDynamicMultiThreading () const
 
virtual void SetDynamicMultiThreading (bool _arg)
 
virtual void DynamicMultiThreadingOn ()
 
virtual void DynamicMultiThreadingOff ()
 
- Protected Member Functions inherited from itk::ProcessObject
virtual void AddInput (DataObject *input)
 
void AddOptionalInputName (const DataObjectIdentifierType &)
 
void AddOptionalInputName (const DataObjectIdentifierType &, DataObjectPointerArraySizeType idx)
 
virtual void AddOutput (DataObject *output)
 
bool AddRequiredInputName (const DataObjectIdentifierType &)
 
bool AddRequiredInputName (const DataObjectIdentifierType &, DataObjectPointerArraySizeType idx)
 
virtual void CacheInputReleaseDataFlags ()
 
virtual void GenerateOutputInformation ()
 
virtual void GenerateOutputRequestedRegion (DataObject *output)
 
DataObjectGetInput (const DataObjectIdentifierType &key)
 
const DataObjectGetInput (const DataObjectIdentifierType &key) const
 
virtual const
DataObjectPointerArraySizeType
GetNumberOfRequiredInputs () const
 
virtual const
DataObjectPointerArraySizeType
GetNumberOfRequiredOutputs () const
 
bool IsIndexedInputName (const DataObjectIdentifierType &) const
 
bool IsIndexedOutputName (const DataObjectIdentifierType &) const
 
bool IsRequiredInputName (const DataObjectIdentifierType &) const
 
DataObjectPointerArraySizeType MakeIndexFromInputName (const DataObjectIdentifierType &name) const
 
DataObjectPointerArraySizeType MakeIndexFromOutputName (const DataObjectIdentifierType &name) const
 
DataObjectIdentifierType MakeNameFromInputIndex (DataObjectPointerArraySizeType idx) const
 
DataObjectIdentifierType MakeNameFromOutputIndex (DataObjectPointerArraySizeType idx) const
 
 ProcessObject ()
 
virtual void PropagateResetPipeline ()
 
virtual void RemoveInput (const DataObjectIdentifierType &key)
 
virtual void RemoveInput (DataObjectPointerArraySizeType)
 
virtual void RemoveOutput (const DataObjectIdentifierType &key)
 
virtual void RemoveOutput (DataObjectPointerArraySizeType idx)
 
bool RemoveRequiredInputName (const DataObjectIdentifierType &)
 
virtual void RestoreInputReleaseDataFlags ()
 
virtual void SetInput (const DataObjectIdentifierType &key, DataObject *input)
 
virtual void SetNthInput (DataObjectPointerArraySizeType num, DataObject *input)
 
virtual void SetNthOutput (DataObjectPointerArraySizeType num, DataObject *output)
 
void SetNumberOfIndexedInputs (DataObjectPointerArraySizeType num)
 
void SetNumberOfIndexedOutputs (DataObjectPointerArraySizeType num)
 
virtual void SetNumberOfRequiredInputs (DataObjectPointerArraySizeType)
 
virtual void SetNumberOfRequiredOutputs (DataObjectPointerArraySizeType _arg)
 
virtual void SetOutput (const DataObjectIdentifierType &key, DataObject *output)
 
virtual void SetPrimaryInput (DataObject *input)
 
virtual void SetPrimaryOutput (DataObject *output)
 
void SetRequiredInputNames (const NameArray &)
 
virtual void VerifyPreconditions () ITKv5_CONST
 
 ~ProcessObject () override
 
DataObjectGetInput (DataObjectPointerArraySizeType idx)
 
const DataObjectGetInput (DataObjectPointerArraySizeType idx) const
 
DataObjectGetPrimaryInput ()
 
const DataObjectGetPrimaryInput () const
 
virtual void SetPrimaryInputName (const DataObjectIdentifierType &key)
 
virtual const char * GetPrimaryInputName () const
 
DataObjectGetOutput (const DataObjectIdentifierType &key)
 
const DataObjectGetOutput (const DataObjectIdentifierType &key) const
 
virtual void SetPrimaryOutputName (const DataObjectIdentifierType &key)
 
virtual const char * GetPrimaryOutputName () const
 
DataObjectGetOutput (DataObjectPointerArraySizeType idx)
 
const DataObjectGetOutput (DataObjectPointerArraySizeType idx) const
 
DataObjectGetPrimaryOutput ()
 
const DataObjectGetPrimaryOutput () const
 
- Protected Member Functions inherited from itk::Object
 Object ()
 
bool PrintObservers (std::ostream &os, Indent indent) const
 
virtual void SetTimeStamp (const TimeStamp &time)
 
 ~Object () override
 
- Protected Member Functions inherited from itk::LightObject
virtual LightObject::Pointer InternalClone () const
 
 LightObject ()
 
virtual void PrintHeader (std::ostream &os, Indent indent) const
 
virtual void PrintTrailer (std::ostream &os, Indent indent) const
 
virtual ~LightObject ()
 

Protected Attributes

SharedDataPointer m_SharedData
 
- Protected Attributes inherited from itk::MultiphaseDenseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction >
unsigned int m_ReinitializeCounter
 
- Protected Attributes inherited from itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, unsigned int >
std::vector
< FiniteDifferenceFunctionPointer
m_DifferenceFunctions
 
unsigned int m_ElapsedIterations
 
IdCellType m_FunctionCount
 
KdTreePointer m_KdTree
 
std::vector< InputImagePointerm_LevelSet
 
VectorIdCellType m_Lookup
 
double m_MaximumRMSError
 
unsigned int m_NumberOfIterations
 
double m_RMSChange
 
bool m_UseImageSpacing
 
- Protected Attributes inherited from itk::ImageSource< TOutputImage >
bool m_DynamicMultiThreading
 
- Protected Attributes inherited from itk::ProcessObject
TimeStamp m_OutputInformationMTime
 
bool m_Updating
 
- Protected Attributes inherited from itk::LightObject
std::atomic< int > m_ReferenceCount
 

Additional Inherited Members

- Protected Types inherited from itk::ImageToImageFilter< TFeatureImage, TOutputImage >
using InputToOutputRegionCopierType = ImageToImageFilterDetail::ImageRegionCopier< Self::OutputImageDimension, Self::InputImageDimension >
 
using OutputToInputRegionCopierType = ImageToImageFilterDetail::ImageRegionCopier< Self::InputImageDimension, Self::OutputImageDimension >
 
- Static Protected Member Functions inherited from itk::ImageSource< TOutputImage >
static const
ImageRegionSplitterBase
GetGlobalDefaultSplitter ()
 
static
ITK_THREAD_RETURN_FUNCTION_CALL_CONVENTION 
ThreaderCallback (void *arg)
 

Member Typedef Documentation

template<typename TInputImage , typename TFeatureImage , typename TOutputImage , typename TFunction = ScalarChanAndVeseLevelSetFunction< TInputImage, TFeatureImage >, class TSharedData = typename TFunction::SharedDataType>
using itk::ScalarChanAndVeseDenseLevelSetImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TSharedData >::ConstPointer = SmartPointer< const Self >
template<typename TInputImage , typename TFeatureImage , typename TOutputImage , typename TFunction = ScalarChanAndVeseLevelSetFunction< TInputImage, TFeatureImage >, class TSharedData = typename TFunction::SharedDataType>
using itk::ScalarChanAndVeseDenseLevelSetImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TSharedData >::FeatureImagePointer = typename FeatureImageType::Pointer
template<typename TInputImage , typename TFeatureImage , typename TOutputImage , typename TFunction = ScalarChanAndVeseLevelSetFunction< TInputImage, TFeatureImage >, class TSharedData = typename TFunction::SharedDataType>
using itk::ScalarChanAndVeseDenseLevelSetImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TSharedData >::FeatureImageType = TFeatureImage
template<typename TInputImage , typename TFeatureImage , typename TOutputImage , typename TFunction = ScalarChanAndVeseLevelSetFunction< TInputImage, TFeatureImage >, class TSharedData = typename TFunction::SharedDataType>
using itk::ScalarChanAndVeseDenseLevelSetImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TSharedData >::FeatureIndexType = typename FeatureImageType::IndexType
template<typename TInputImage , typename TFeatureImage , typename TOutputImage , typename TFunction = ScalarChanAndVeseLevelSetFunction< TInputImage, TFeatureImage >, class TSharedData = typename TFunction::SharedDataType>
using itk::ScalarChanAndVeseDenseLevelSetImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TSharedData >::FeatureIndexValueType = typename FeatureIndexType::IndexValueType
template<typename TInputImage , typename TFeatureImage , typename TOutputImage , typename TFunction = ScalarChanAndVeseLevelSetFunction< TInputImage, TFeatureImage >, class TSharedData = typename TFunction::SharedDataType>
using itk::ScalarChanAndVeseDenseLevelSetImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TSharedData >::FeaturePixelType = typename FeatureImageType::PixelType
template<typename TInputImage , typename TFeatureImage , typename TOutputImage , typename TFunction = ScalarChanAndVeseLevelSetFunction< TInputImage, TFeatureImage >, class TSharedData = typename TFunction::SharedDataType>
using itk::ScalarChanAndVeseDenseLevelSetImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TSharedData >::FeatureRegionType = typename FeatureImageType::RegionType
template<typename TInputImage , typename TFeatureImage , typename TOutputImage , typename TFunction = ScalarChanAndVeseLevelSetFunction< TInputImage, TFeatureImage >, class TSharedData = typename TFunction::SharedDataType>
using itk::ScalarChanAndVeseDenseLevelSetImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TSharedData >::FiniteDifferenceFunctionType = typename Superclass::FiniteDifferenceFunctionType
template<typename TInputImage , typename TFeatureImage , typename TOutputImage , typename TFunction = ScalarChanAndVeseLevelSetFunction< TInputImage, TFeatureImage >, class TSharedData = typename TFunction::SharedDataType>
using itk::ScalarChanAndVeseDenseLevelSetImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TSharedData >::FunctionPointer = typename FunctionType::Pointer
template<typename TInputImage , typename TFeatureImage , typename TOutputImage , typename TFunction = ScalarChanAndVeseLevelSetFunction< TInputImage, TFeatureImage >, class TSharedData = typename TFunction::SharedDataType>
using itk::ScalarChanAndVeseDenseLevelSetImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TSharedData >::FunctionType = TFunction
template<typename TInputImage , typename TFeatureImage , typename TOutputImage , typename TFunction = ScalarChanAndVeseLevelSetFunction< TInputImage, TFeatureImage >, class TSharedData = typename TFunction::SharedDataType>
using itk::ScalarChanAndVeseDenseLevelSetImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TSharedData >::IndexType = typename OutputImageType::IndexType
template<typename TInputImage , typename TFeatureImage , typename TOutputImage , typename TFunction = ScalarChanAndVeseLevelSetFunction< TInputImage, TFeatureImage >, class TSharedData = typename TFunction::SharedDataType>
using itk::ScalarChanAndVeseDenseLevelSetImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TSharedData >::InputImagePointer = typename Superclass::InputImagePointer
template<typename TInputImage , typename TFeatureImage , typename TOutputImage , typename TFunction = ScalarChanAndVeseLevelSetFunction< TInputImage, TFeatureImage >, class TSharedData = typename TFunction::SharedDataType>
using itk::ScalarChanAndVeseDenseLevelSetImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TSharedData >::InputImageType = typename Superclass::InputImageType

Inherited type alias from the superclass.

Definition at line 89 of file itkScalarChanAndVeseDenseLevelSetImageFilter.h.

template<typename TInputImage , typename TFeatureImage , typename TOutputImage , typename TFunction = ScalarChanAndVeseLevelSetFunction< TInputImage, TFeatureImage >, class TSharedData = typename TFunction::SharedDataType>
using itk::ScalarChanAndVeseDenseLevelSetImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TSharedData >::InputPointType = typename Superclass::InputPointType
template<typename TInputImage , typename TFeatureImage , typename TOutputImage , typename TFunction = ScalarChanAndVeseLevelSetFunction< TInputImage, TFeatureImage >, class TSharedData = typename TFunction::SharedDataType>
using itk::ScalarChanAndVeseDenseLevelSetImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TSharedData >::InputSpacingType = typename InputImageType::SpacingType
template<typename TInputImage , typename TFeatureImage , typename TOutputImage , typename TFunction = ScalarChanAndVeseLevelSetFunction< TInputImage, TFeatureImage >, class TSharedData = typename TFunction::SharedDataType>
using itk::ScalarChanAndVeseDenseLevelSetImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TSharedData >::OutputImageType = TOutputImage

Output image type type alias

Definition at line 103 of file itkScalarChanAndVeseDenseLevelSetImageFilter.h.

template<typename TInputImage , typename TFeatureImage , typename TOutputImage , typename TFunction = ScalarChanAndVeseLevelSetFunction< TInputImage, TFeatureImage >, class TSharedData = typename TFunction::SharedDataType>
using itk::ScalarChanAndVeseDenseLevelSetImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TSharedData >::OutputPixelType = typename OutputImageType::PixelType
template<typename TInputImage , typename TFeatureImage , typename TOutputImage , typename TFunction = ScalarChanAndVeseLevelSetFunction< TInputImage, TFeatureImage >, class TSharedData = typename TFunction::SharedDataType>
using itk::ScalarChanAndVeseDenseLevelSetImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TSharedData >::Pointer = SmartPointer< Self >
template<typename TInputImage , typename TFeatureImage , typename TOutputImage , typename TFunction = ScalarChanAndVeseLevelSetFunction< TInputImage, TFeatureImage >, class TSharedData = typename TFunction::SharedDataType>
using itk::ScalarChanAndVeseDenseLevelSetImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TSharedData >::ROIFilterPointer = typename ROIFilterType::Pointer
template<typename TInputImage , typename TFeatureImage , typename TOutputImage , typename TFunction = ScalarChanAndVeseLevelSetFunction< TInputImage, TFeatureImage >, class TSharedData = typename TFunction::SharedDataType>
using itk::ScalarChanAndVeseDenseLevelSetImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TSharedData >::ROIFilterType = RegionOfInterestImageFilter< FeatureImageType, FeatureImageType >
template<typename TInputImage , typename TFeatureImage , typename TOutputImage , typename TFunction = ScalarChanAndVeseLevelSetFunction< TInputImage, TFeatureImage >, class TSharedData = typename TFunction::SharedDataType>
using itk::ScalarChanAndVeseDenseLevelSetImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TSharedData >::Self = ScalarChanAndVeseDenseLevelSetImageFilter
template<typename TInputImage , typename TFeatureImage , typename TOutputImage , typename TFunction = ScalarChanAndVeseLevelSetFunction< TInputImage, TFeatureImage >, class TSharedData = typename TFunction::SharedDataType>
using itk::ScalarChanAndVeseDenseLevelSetImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TSharedData >::SharedDataPointer = typename SharedDataType::Pointer
template<typename TInputImage , typename TFeatureImage , typename TOutputImage , typename TFunction = ScalarChanAndVeseLevelSetFunction< TInputImage, TFeatureImage >, class TSharedData = typename TFunction::SharedDataType>
using itk::ScalarChanAndVeseDenseLevelSetImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TSharedData >::SharedDataType = TSharedData
template<typename TInputImage , typename TFeatureImage , typename TOutputImage , typename TFunction = ScalarChanAndVeseLevelSetFunction< TInputImage, TFeatureImage >, class TSharedData = typename TFunction::SharedDataType>
using itk::ScalarChanAndVeseDenseLevelSetImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TSharedData >::Superclass = MultiphaseDenseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction >
template<typename TInputImage , typename TFeatureImage , typename TOutputImage , typename TFunction = ScalarChanAndVeseLevelSetFunction< TInputImage, TFeatureImage >, class TSharedData = typename TFunction::SharedDataType>
using itk::ScalarChanAndVeseDenseLevelSetImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TSharedData >::TimeStepType = typename Superclass::TimeStepType
template<typename TInputImage , typename TFeatureImage , typename TOutputImage , typename TFunction = ScalarChanAndVeseLevelSetFunction< TInputImage, TFeatureImage >, class TSharedData = typename TFunction::SharedDataType>
using itk::ScalarChanAndVeseDenseLevelSetImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TSharedData >::ValueType = typename Superclass::ValueType

Constructor & Destructor Documentation

template<typename TInputImage , typename TFeatureImage , typename TOutputImage , typename TFunction = ScalarChanAndVeseLevelSetFunction< TInputImage, TFeatureImage >, class TSharedData = typename TFunction::SharedDataType>
itk::ScalarChanAndVeseDenseLevelSetImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TSharedData >::ScalarChanAndVeseDenseLevelSetImageFilter ( )
inlineprotected
template<typename TInputImage , typename TFeatureImage , typename TOutputImage , typename TFunction = ScalarChanAndVeseLevelSetFunction< TInputImage, TFeatureImage >, class TSharedData = typename TFunction::SharedDataType>
itk::ScalarChanAndVeseDenseLevelSetImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TSharedData >::~ScalarChanAndVeseDenseLevelSetImageFilter ( )
inlineoverrideprotected

Member Function Documentation

template<typename TInputImage , typename TFeatureImage , typename TOutputImage , typename TFunction = ScalarChanAndVeseLevelSetFunction< TInputImage, TFeatureImage >, class TSharedData = typename TFunction::SharedDataType>
virtual::itk::LightObject::Pointer itk::ScalarChanAndVeseDenseLevelSetImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TSharedData >::CreateAnother ( ) const
virtual

Create an object from an instance, potentially deferring to a factory. This method allows you to create an instance of an object that is exactly the same type as the referring object. This is useful in cases where an object has been cast back to a base class.

Reimplemented from itk::Object.

template<typename TInputImage , typename TFeatureImage , typename TOutputImage , typename TFunction = ScalarChanAndVeseLevelSetFunction< TInputImage, TFeatureImage >, class TSharedData = typename TFunction::SharedDataType>
virtual const char* itk::ScalarChanAndVeseDenseLevelSetImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TSharedData >::GetNameOfClass ( ) const
virtual

Run-time type information (and related methods).

Reimplemented from itk::MultiphaseDenseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction >.

template<typename TInputImage , typename TFeatureImage , typename TOutputImage , typename TFunction = ScalarChanAndVeseLevelSetFunction< TInputImage, TFeatureImage >, class TSharedData = typename TFunction::SharedDataType>
void itk::ScalarChanAndVeseDenseLevelSetImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TSharedData >::Initialize ( )
overrideprotectedvirtual

This method is optionally defined by a subclass and is called before the loop of iterations of calculate_change & upate. It does the global initialization, i.e. in the SparseFieldLevelSetImageFilter, initialize the list of layers.

Reimplemented from itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, unsigned int >.

template<typename TInputImage , typename TFeatureImage , typename TOutputImage , typename TFunction = ScalarChanAndVeseLevelSetFunction< TInputImage, TFeatureImage >, class TSharedData = typename TFunction::SharedDataType>
void itk::ScalarChanAndVeseDenseLevelSetImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TSharedData >::InitializeIteration ( )
overrideprotectedvirtual

This method is optionally defined by a subclass and is called immediately prior to each iterative CalculateChange-ApplyUpdate cycle. It can be used to set global variables needed for the next iteration (ie. average gradient magnitude of the image in anisotropic diffusion functions), or otherwise prepare for the next iteration.

Reimplemented from itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, unsigned int >.

template<typename TInputImage , typename TFeatureImage , typename TOutputImage , typename TFunction = ScalarChanAndVeseLevelSetFunction< TInputImage, TFeatureImage >, class TSharedData = typename TFunction::SharedDataType>
static Pointer itk::ScalarChanAndVeseDenseLevelSetImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TSharedData >::New ( )
static

Method for creation through the object factory.

template<typename TInputImage , typename TFeatureImage , typename TOutputImage , typename TFunction = ScalarChanAndVeseLevelSetFunction< TInputImage, TFeatureImage >, class TSharedData = typename TFunction::SharedDataType>
virtual void itk::ScalarChanAndVeseDenseLevelSetImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TSharedData >::SetFeatureImage ( const FeatureImagePointer  f)
inlinevirtual

Set/Get the feature image to be used for speed function of the level set equation. Equivalent to calling Set/GetInput(1, ..)

Definition at line 128 of file itkScalarChanAndVeseDenseLevelSetImageFilter.h.

Member Data Documentation

template<typename TInputImage , typename TFeatureImage , typename TOutputImage , typename TFunction = ScalarChanAndVeseLevelSetFunction< TInputImage, TFeatureImage >, class TSharedData = typename TFunction::SharedDataType>
constexpr unsigned int itk::ScalarChanAndVeseDenseLevelSetImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TSharedData >::ImageDimension = TInputImage::ImageDimension
static
template<typename TInputImage , typename TFeatureImage , typename TOutputImage , typename TFunction = ScalarChanAndVeseLevelSetFunction< TInputImage, TFeatureImage >, class TSharedData = typename TFunction::SharedDataType>
SharedDataPointer itk::ScalarChanAndVeseDenseLevelSetImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TSharedData >::m_SharedData
protected

The documentation for this class was generated from the following file: