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ITK
5.0.0
Insight Segmentation and Registration Toolkit
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#include <itkVolumeSplineKernelTransform.h>
This class defines the thin plate spline (TPS) transformation. It is implemented in as straightforward a manner as possible from the IEEE TMI paper by Davis, Khotanzad, Flamig, and Harms, Vol. 16 No. 3 June 1997
Definition at line 36 of file itkVolumeSplineKernelTransform.h.
Public Types | |
using | ConstPointer = SmartPointer< const Self > |
using | FixedParametersType = typename Superclass::FixedParametersType |
using | InputCovariantVectorType = typename Superclass::InputCovariantVectorType |
using | InputPointType = typename Superclass::InputPointType |
using | InputVectorType = typename Superclass::InputVectorType |
using | InverseJacobianPositionType = typename Superclass::InverseJacobianPositionType |
using | JacobianPositionType = typename Superclass::JacobianPositionType |
using | JacobianType = typename Superclass::JacobianType |
using | OutputCovariantVectorType = typename Superclass::OutputCovariantVectorType |
using | OutputPointType = typename Superclass::OutputPointType |
using | OutputVectorType = typename Superclass::OutputVectorType |
using | ParametersType = typename Superclass::ParametersType |
using | Pointer = SmartPointer< Self > |
using | PointsIterator = typename Superclass::PointsIterator |
using | ScalarType = typename Superclass::ScalarType |
using | Self = VolumeSplineKernelTransform |
using | Superclass = KernelTransform< TParametersValueType, NDimensions > |
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using | AMatrixType = vnl_matrix_fixed< TParametersValueType, NDimensions, NDimensions > |
using | BMatrixType = vnl_vector_fixed< TParametersValueType, NDimensions > |
using | ColumnMatrixType = vnl_matrix_fixed< TParametersValueType, NDimensions, 1 > |
using | ConstPointer = SmartPointer< const Self > |
using | DMatrixType = vnl_matrix< TParametersValueType > |
using | FixedParametersType = typename Superclass::FixedParametersType |
using | GMatrixType = vnl_matrix_fixed< TParametersValueType, NDimensions, NDimensions > |
using | IMatrixType = vnl_matrix_fixed< TParametersValueType, NDimensions, NDimensions > |
using | InputCovariantVectorType = typename Superclass::InputCovariantVectorType |
using | InputPointType = typename Superclass::InputPointType |
using | InputVectorType = typename Superclass::InputVectorType |
using | InputVnlVectorType = typename Superclass::InputVnlVectorType |
using | InverseJacobianPositionType = typename Superclass::InverseJacobianPositionType |
using | JacobianPositionType = typename Superclass::JacobianPositionType |
using | JacobianType = typename Superclass::JacobianType |
using | KMatrixType = vnl_matrix< TParametersValueType > |
using | LMatrixType = vnl_matrix< TParametersValueType > |
using | NumberOfParametersType = typename Superclass::NumberOfParametersType |
using | OutputCovariantVectorType = typename Superclass::OutputCovariantVectorType |
using | OutputPointType = typename Superclass::OutputPointType |
using | OutputVectorType = typename Superclass::OutputVectorType |
using | OutputVnlVectorType = typename Superclass::OutputVnlVectorType |
using | ParametersType = typename Superclass::ParametersType |
using | PMatrixType = vnl_matrix< TParametersValueType > |
using | Pointer = SmartPointer< Self > |
using | PointIdentifier = typename PointSetType::PointIdentifier |
using | PointsConstIterator = typename PointSetType::PointsContainerConstIterator |
using | PointsContainer = typename PointSetType::PointsContainer |
using | PointSetPointer = typename PointSetType::Pointer |
using | PointSetTraitsType = DefaultStaticMeshTraits< TParametersValueType, NDimensions, NDimensions, TParametersValueType, TParametersValueType > |
using | PointSetType = PointSet< InputPointType, NDimensions, PointSetTraitsType > |
using | PointsIterator = typename PointSetType::PointsContainerIterator |
using | RowMatrixType = vnl_matrix_fixed< TParametersValueType, 1, NDimensions > |
using | ScalarType = typename Superclass::ScalarType |
using | Self = KernelTransform |
using | Superclass = Transform< TParametersValueType, NDimensions, NDimensions > |
using | TransformCategoryType = typename Superclass::TransformCategoryType |
using | VectorSetPointer = typename VectorSetType::Pointer |
using | VectorSetType = itk::VectorContainer< SizeValueType, InputVectorType > |
using | WMatrixType = vnl_matrix< TParametersValueType > |
using | YMatrixType = vnl_matrix< TParametersValueType > |
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using | ConstPointer = SmartPointer< const Self > |
using | DerivativeType = Array< ParametersValueType > |
using | DirectionChangeMatrix = Matrix< double, Self::OutputSpaceDimension, Self::InputSpaceDimension > |
using | FixedParametersType = typename Superclass::FixedParametersType |
using | FixedParametersValueType = typename Superclass::FixedParametersValueType |
using | InputCovariantVectorType = CovariantVector< TParametersValueType, NInputDimensions > |
using | InputDiffusionTensor3DType = DiffusionTensor3D< TParametersValueType > |
using | InputDirectionMatrix = Matrix< double, Self::InputSpaceDimension, Self::InputSpaceDimension > |
using | InputPointType = Point< TParametersValueType, NInputDimensions > |
using | InputSymmetricSecondRankTensorType = SymmetricSecondRankTensor< TParametersValueType, NInputDimensions > |
using | InputVectorPixelType = VariableLengthVector< TParametersValueType > |
using | InputVectorType = Vector< TParametersValueType, NInputDimensions > |
using | InputVnlVectorType = vnl_vector_fixed< TParametersValueType, NInputDimensions > |
using | InverseJacobianPositionType = vnl_matrix_fixed< ParametersValueType, NInputDimensions, NOutputDimensions > |
using | InverseTransformBasePointer = typename InverseTransformBaseType::Pointer |
using | InverseTransformBaseType = Transform< TParametersValueType, NOutputDimensions, NInputDimensions > |
using | JacobianPositionType = vnl_matrix_fixed< ParametersValueType, NOutputDimensions, NInputDimensions > |
using | JacobianType = Array2D< ParametersValueType > |
using | MatrixType = Matrix< TParametersValueType, Self::OutputSpaceDimension, Self::InputSpaceDimension > |
using | NumberOfParametersType = typename Superclass::NumberOfParametersType |
using | OutputCovariantVectorType = CovariantVector< TParametersValueType, NOutputDimensions > |
using | OutputDiffusionTensor3DType = DiffusionTensor3D< TParametersValueType > |
using | OutputDirectionMatrix = Matrix< double, Self::OutputSpaceDimension, Self::OutputSpaceDimension > |
using | OutputPointType = Point< TParametersValueType, NOutputDimensions > |
using | OutputSymmetricSecondRankTensorType = SymmetricSecondRankTensor< TParametersValueType, NOutputDimensions > |
using | OutputVectorPixelType = VariableLengthVector< TParametersValueType > |
using | OutputVectorType = Vector< TParametersValueType, NOutputDimensions > |
using | OutputVnlVectorType = vnl_vector_fixed< TParametersValueType, NOutputDimensions > |
using | ParametersType = typename Superclass::ParametersType |
using | ParametersValueType = typename Superclass::ParametersValueType |
using | Pointer = SmartPointer< Self > |
using | ScalarType = ParametersValueType |
using | Self = Transform |
using | Superclass = TransformBaseTemplate< TParametersValueType > |
using | TransformCategoryType = typename Superclass::TransformCategoryType |
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using | ConstPointer = SmartPointer< const Self > |
using | FixedParametersType = OptimizerParameters< FixedParametersValueType > |
using | FixedParametersValueType = double |
using | NumberOfParametersType = IdentifierType |
using | ParametersType = OptimizerParameters< ParametersValueType > |
using | ParametersValueType = TParametersValueType |
using | Pointer = SmartPointer< Self > |
using | Self = TransformBaseTemplate |
using | Superclass = Object |
enum | TransformCategoryType { UnknownTransformCategory =0, Linear =1, BSpline =2, Spline =3, DisplacementField =4, VelocityField =5 } |
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using | ConstPointer = SmartPointer< const Self > |
using | Pointer = SmartPointer< Self > |
using | Self = Object |
using | Superclass = LightObject |
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using | ConstPointer = SmartPointer< const Self > |
using | Pointer = SmartPointer< Self > |
using | Self = LightObject |
Static Public Member Functions | |
static Pointer | New () |
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static Pointer | New () |
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static bool | GetGlobalWarningDisplay () |
static void | GlobalWarningDisplayOff () |
static void | GlobalWarningDisplayOn () |
static Pointer | New () |
static void | SetGlobalWarningDisplay (bool flag) |
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static void | BreakOnError () |
static Pointer | New () |
Static Public Attributes | |
static constexpr unsigned int | SpaceDimension = Superclass::SpaceDimension |
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static constexpr unsigned int | SpaceDimension = NDimensions |
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static constexpr unsigned int | InputSpaceDimension |
static constexpr unsigned int | OutputSpaceDimension |
Protected Types | |
using | GMatrixType = typename Superclass::GMatrixType |
Protected Member Functions | |
void | ComputeDeformationContribution (const InputPointType &inputPoint, OutputPointType &result) const override |
void | ComputeG (const InputVectorType &landmarkVector, GMatrixType &gmatrix) const override |
VolumeSplineKernelTransform ()=default | |
~VolumeSplineKernelTransform () override=default | |
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void | ComputeD () |
void | ComputeK () |
void | ComputeL () |
void | ComputeP () |
virtual const GMatrixType & | ComputeReflexiveG (PointsIterator) const |
void | ComputeY () |
KernelTransform () | |
void | PrintSelf (std::ostream &os, Indent indent) const override |
void | ReorganizeW () |
~KernelTransform () override=default | |
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LightObject::Pointer | InternalClone () const override |
OutputDiffusionTensor3DType | PreservationOfPrincipalDirectionDiffusionTensor3DReorientation (const InputDiffusionTensor3DType &, const InverseJacobianPositionType &) const |
Transform () | |
Transform (NumberOfParametersType NumberOfParameters) | |
~Transform () override=default | |
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TransformBaseTemplate ()=default | |
~TransformBaseTemplate () override=default | |
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Object () | |
bool | PrintObservers (std::ostream &os, Indent indent) const |
virtual void | SetTimeStamp (const TimeStamp &time) |
~Object () override | |
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LightObject () | |
virtual void | PrintHeader (std::ostream &os, Indent indent) const |
virtual void | PrintTrailer (std::ostream &os, Indent indent) const |
virtual | ~LightObject () |
Additional Inherited Members | |
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AMatrixType | m_AMatrix |
BMatrixType | m_BVector |
VectorSetPointer | m_Displacements |
DMatrixType | m_DMatrix |
GMatrixType | m_GMatrix |
IMatrixType | m_I |
KMatrixType | m_KMatrix |
LMatrixType | m_LMatrix |
PMatrixType | m_PMatrix |
PointSetPointer | m_SourceLandmarks |
double | m_Stiffness |
PointSetPointer | m_TargetLandmarks |
WMatrixType | m_WMatrix |
bool | m_WMatrixComputed |
YMatrixType | m_YMatrix |
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DirectionChangeMatrix | m_DirectionChange |
FixedParametersType | m_FixedParameters |
ParametersType | m_Parameters |
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std::atomic< int > | m_ReferenceCount |
using itk::VolumeSplineKernelTransform< TParametersValueType, NDimensions >::ConstPointer = SmartPointer<const Self> |
Definition at line 46 of file itkVolumeSplineKernelTransform.h.
using itk::VolumeSplineKernelTransform< TParametersValueType, NDimensions >::FixedParametersType = typename Superclass::FixedParametersType |
Definition at line 59 of file itkVolumeSplineKernelTransform.h.
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protected |
These (rather redundant) type alias are needed because on type alias are not inherited.
Definition at line 83 of file itkVolumeSplineKernelTransform.h.
using itk::VolumeSplineKernelTransform< TParametersValueType, NDimensions >::InputCovariantVectorType = typename Superclass::InputCovariantVectorType |
Definition at line 74 of file itkVolumeSplineKernelTransform.h.
using itk::VolumeSplineKernelTransform< TParametersValueType, NDimensions >::InputPointType = typename Superclass::InputPointType |
These (rather redundant) type alias are needed because type alias are not inherited
Definition at line 70 of file itkVolumeSplineKernelTransform.h.
using itk::VolumeSplineKernelTransform< TParametersValueType, NDimensions >::InputVectorType = typename Superclass::InputVectorType |
Definition at line 72 of file itkVolumeSplineKernelTransform.h.
using itk::VolumeSplineKernelTransform< TParametersValueType, NDimensions >::InverseJacobianPositionType = typename Superclass::InverseJacobianPositionType |
Definition at line 64 of file itkVolumeSplineKernelTransform.h.
using itk::VolumeSplineKernelTransform< TParametersValueType, NDimensions >::JacobianPositionType = typename Superclass::JacobianPositionType |
Definition at line 63 of file itkVolumeSplineKernelTransform.h.
using itk::VolumeSplineKernelTransform< TParametersValueType, NDimensions >::JacobianType = typename Superclass::JacobianType |
Jacobian Type
Definition at line 62 of file itkVolumeSplineKernelTransform.h.
using itk::VolumeSplineKernelTransform< TParametersValueType, NDimensions >::OutputCovariantVectorType = typename Superclass::OutputCovariantVectorType |
Definition at line 75 of file itkVolumeSplineKernelTransform.h.
using itk::VolumeSplineKernelTransform< TParametersValueType, NDimensions >::OutputPointType = typename Superclass::OutputPointType |
Definition at line 71 of file itkVolumeSplineKernelTransform.h.
using itk::VolumeSplineKernelTransform< TParametersValueType, NDimensions >::OutputVectorType = typename Superclass::OutputVectorType |
Definition at line 73 of file itkVolumeSplineKernelTransform.h.
using itk::VolumeSplineKernelTransform< TParametersValueType, NDimensions >::ParametersType = typename Superclass::ParametersType |
Parameters type.
Definition at line 58 of file itkVolumeSplineKernelTransform.h.
using itk::VolumeSplineKernelTransform< TParametersValueType, NDimensions >::Pointer = SmartPointer<Self> |
Definition at line 45 of file itkVolumeSplineKernelTransform.h.
using itk::VolumeSplineKernelTransform< TParametersValueType, NDimensions >::PointsIterator = typename Superclass::PointsIterator |
Definition at line 76 of file itkVolumeSplineKernelTransform.h.
using itk::VolumeSplineKernelTransform< TParametersValueType, NDimensions >::ScalarType = typename Superclass::ScalarType |
Scalar type.
Definition at line 55 of file itkVolumeSplineKernelTransform.h.
using itk::VolumeSplineKernelTransform< TParametersValueType, NDimensions >::Self = VolumeSplineKernelTransform |
Standard class type aliases.
Definition at line 43 of file itkVolumeSplineKernelTransform.h.
using itk::VolumeSplineKernelTransform< TParametersValueType, NDimensions >::Superclass = KernelTransform<TParametersValueType, NDimensions> |
Definition at line 44 of file itkVolumeSplineKernelTransform.h.
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protecteddefault |
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overrideprotecteddefault |
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Compute the contribution of the landmarks weighted by the kernel funcion to the global deformation of the space
Reimplemented from itk::KernelTransform< TParametersValueType, NDimensions >.
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Compute G(x) For the volume plate spline, this is: G(x) = r(x)^3*I where r(x) = Euclidean norm = sqrt[x1^2 + x2^2 + x3^2]
I = identity matrix.
Reimplemented from itk::KernelTransform< TParametersValueType, NDimensions >.
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Create an object from an instance, potentially deferring to a factory. This method allows you to create an instance of an object that is exactly the same type as the referring object. This is useful in cases where an object has been cast back to a base class.
Reimplemented from itk::KernelTransform< TParametersValueType, NDimensions >.
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Run-time type information (and related methods).
Reimplemented from itk::KernelTransform< TParametersValueType, NDimensions >.
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New macro for creation of through a Smart Pointer
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Dimension of the domain space.
Definition at line 67 of file itkVolumeSplineKernelTransform.h.