itkRenyiEntropyThresholdCalculator.h

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/*=========================================================================
 *
 *  Copyright Insight Software Consortium
 *
 *  Licensed under the Apache License, Version 2.0 (the "License");
 *  you may not use this file except in compliance with the License.
 *  You may obtain a copy of the License at
 *
 *         http://www.apache.org/licenses/LICENSE-2.0.txt
 *
 *  Unless required by applicable law or agreed to in writing, software
 *  distributed under the License is distributed on an "AS IS" BASIS,
 *  WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
 *  See the License for the specific language governing permissions and
 *  limitations under the License.
 *
 *=========================================================================*/

#ifndef itkRenyiEntropyThresholdCalculator_h
#define itkRenyiEntropyThresholdCalculator_h

#include "itkHistogramThresholdCalculator.h"

namespace itk
{

template <typename THistogram, typename TOutput=double>
class ITK_TEMPLATE_EXPORT RenyiEntropyThresholdCalculator : public HistogramThresholdCalculator<THistogram, TOutput>
{
public:
  ITK_DISALLOW_COPY_AND_ASSIGN(RenyiEntropyThresholdCalculator);

  using Self = RenyiEntropyThresholdCalculator;
  using Superclass = HistogramThresholdCalculator<THistogram, TOutput>;
  using Pointer = SmartPointer<Self>;
  using ConstPointer = SmartPointer<const Self>;

  itkNewMacro(Self);

  itkTypeMacro(RenyiEntropyThresholdCalculator, HistogramThresholdCalculator);

  using HistogramType = THistogram;
  using OutputType = TOutput;

protected:
  RenyiEntropyThresholdCalculator() { m_FirstBin = 0; m_LastBin = 0; m_Size = 0; }
  ~RenyiEntropyThresholdCalculator() override = default;

  void GenerateData() override;

  void PrintSelf(std::ostream& os, Indent indent) const override;

  using TotalAbsoluteFrequencyType = typename HistogramType::TotalAbsoluteFrequencyType;
  using AbsoluteFrequencyType = typename HistogramType::AbsoluteFrequencyType;
  using InstanceIdentifier = typename HistogramType::InstanceIdentifier;
  using SizeValueType = typename HistogramType::SizeValueType;

  InstanceIdentifier MaxEntropyThresholding( const HistogramType* histogram,
                                             const std::vector< double >& normHisto,
                                             const std::vector< double >& P1,
                                             const std::vector< double >& P2 );

  InstanceIdentifier MaxEntropyThresholding2( const HistogramType* histogram,
                                              const std::vector< double >& normHisto,
                                              const std::vector< double >& P1,
                                              const std::vector< double >& P2 );

  InstanceIdentifier MaxEntropyThresholding3( const HistogramType* histogram,
                                              const std::vector< double >& normHisto,
                                              const std::vector< double >& P1,
                                              const std::vector< double >& P2 );

private:
  InstanceIdentifier  m_FirstBin;
  InstanceIdentifier  m_LastBin;
  SizeValueType       m_Size;
};

} // end namespace itk


#ifndef ITK_MANUAL_INSTANTIATION
#include "itkRenyiEntropyThresholdCalculator.hxx"
#endif

#endif