itkShapeOpeningLabelMapFilter.h

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/*=========================================================================
 *
 *  Copyright NumFOCUS
 *
 *  Licensed under the Apache License, Version 2.0 (the "License");
 *  you may not use this file except in compliance with the License.
 *  You may obtain a copy of the License at
 *
 *         http://www.apache.org/licenses/LICENSE-2.0.txt
 *
 *  Unless required by applicable law or agreed to in writing, software
 *  distributed under the License is distributed on an "AS IS" BASIS,
 *  WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
 *  See the License for the specific language governing permissions and
 *  limitations under the License.
 *
 *=========================================================================*/
#ifndef itkShapeOpeningLabelMapFilter_h
#define itkShapeOpeningLabelMapFilter_h
 
#include "itkInPlaceLabelMapFilter.h"
#include "itkShapeLabelObjectAccessors.h"
#include "itkProgressReporter.h"
 
namespace itk
{
template <typename TImage>
class ITK_TEMPLATE_EXPORT ShapeOpeningLabelMapFilter : public InPlaceLabelMapFilter<TImage>
{
public:
  ITK_DISALLOW_COPY_AND_ASSIGN(ShapeOpeningLabelMapFilter);
 
  using Self = ShapeOpeningLabelMapFilter;
  using Superclass = InPlaceLabelMapFilter<TImage>;
  using Pointer = SmartPointer<Self>;
  using ConstPointer = SmartPointer<const Self>;
 
  using ImageType = TImage;
  using ImagePointer = typename ImageType::Pointer;
  using ImageConstPointer = typename ImageType::ConstPointer;
  using PixelType = typename ImageType::PixelType;
  using IndexType = typename ImageType::IndexType;
  using LabelObjectType = typename ImageType::LabelObjectType;
 
  using AttributeType = typename LabelObjectType::AttributeType;
 
  static constexpr unsigned int ImageDimension = TImage::ImageDimension;
 
  itkNewMacro(Self);
 
  itkTypeMacro(ShapeOpeningLabelMapFilter, InPlaceLabelMapFilter);
 
#ifdef ITK_USE_CONCEPT_CHECKING
  // Begin concept checking
/*  itkConceptMacro(InputEqualityComparableCheck,
    (Concept::EqualityComparable<InputImagePixelType>));
  itkConceptMacro(IntConvertibleToInputCheck,
    (Concept::Convertible<int, InputImagePixelType>));
  itkConceptMacro(InputOStreamWritableCheck,
    (Concept::OStreamWritable<InputImagePixelType>));*/
// End concept checking
#endif
 
  itkGetConstMacro(Lambda, double);
  itkSetMacro(Lambda, double);
 
  itkGetConstMacro(ReverseOrdering, bool);
  itkSetMacro(ReverseOrdering, bool);
  itkBooleanMacro(ReverseOrdering);
 
  itkGetConstMacro(Attribute, AttributeType);
  itkSetMacro(Attribute, AttributeType);
  void
  SetAttribute(const std::string & s)
  {
    this->SetAttribute(LabelObjectType::GetAttributeFromName(s));
  }
 
protected:
  ShapeOpeningLabelMapFilter();
  ~ShapeOpeningLabelMapFilter() override = default;
 
  void
  GenerateData() override;
 
  template <typename TAttributeAccessor>
  void
  TemplatedGenerateData(const TAttributeAccessor & accessor)
  {
    // Allocate the output
    this->AllocateOutputs();
 
    ImageType * output = this->GetOutput();
    ImageType * output2 = this->GetOutput(1);
    itkAssertInDebugAndIgnoreInReleaseMacro(this->GetNumberOfIndexedOutputs() == 2);
    itkAssertInDebugAndIgnoreInReleaseMacro(output2 != nullptr);
 
    // set the background value for the second output - this is not done in the
    // superclasses
    output2->SetBackgroundValue(output->GetBackgroundValue());
 
    ProgressReporter progress(this, 0, output->GetNumberOfLabelObjects());
 
    typename ImageType::Iterator it(output);
    while (!it.IsAtEnd())
    {
      typename LabelObjectType::LabelType label = it.GetLabel();
      LabelObjectType *                   labelObject = it.GetLabelObject();
 
      if ((!m_ReverseOrdering && accessor(labelObject) < m_Lambda) ||
          (m_ReverseOrdering && accessor(labelObject) > m_Lambda))
      {
        // must increment the iterator before removing the object to avoid
        // invalidating the iterator
        ++it;
        output2->AddLabelObject(labelObject);
        output->RemoveLabel(label);
      }
      else
      {
        ++it;
      }
 
      progress.CompletedPixel();
    }
  }
 
  void
  PrintSelf(std::ostream & os, Indent indent) const override;
 
  double m_Lambda;
 
  bool m_ReverseOrdering;
 
  AttributeType m_Attribute;
}; // end of class
} // end namespace itk
 
#ifndef ITK_MANUAL_INSTANTIATION
#  include "itkShapeOpeningLabelMapFilter.hxx"
#endif
 
#endif