Examples/Filtering/ResampleImageFilter7.cxx

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//  Software Guide : BeginLatex
//
//  The following example illustrates how to use the
//  \doxygen{BSplineInterpolateImageFunction} for resampling an image.  In
//  this particular case an \doxygen{AffineTransform} is used to map the input
//  space into the output space.
//
//  \index{itk::AffineTransform!resampling}
//
//  Software Guide : EndLatex
 
 
#include "itkImage.h"
#include "itkImageFileReader.h"
#include "itkImageFileWriter.h"
#include "itkResampleImageFilter.h"
#include "itkBSplineInterpolateImageFunction.h"
 
//  Software Guide : BeginLatex
//
//  The header of the affine transform is included below.
//
//  Software Guide : EndLatex
 
// Software Guide : BeginCodeSnippet
#include "itkAffineTransform.h"
// Software Guide : EndCodeSnippet
 
 
int
main(int argc, char * argv[])
{
  if (argc < 4)
  {
    std::cerr << "Usage: " << std::endl;
    std::cerr << argv[0] << "  inputImageFile  outputImageFile  degrees"
              << std::endl;
    return EXIT_FAILURE;
  }
 
  constexpr unsigned int Dimension = 2;
  using InputPixelType = unsigned char;
  using OutputPixelType = unsigned char;
 
  using InputImageType = itk::Image<InputPixelType, Dimension>;
  using OutputImageType = itk::Image<OutputPixelType, Dimension>;
 
  using ReaderType = itk::ImageFileReader<InputImageType>;
  using WriterType = itk::ImageFileWriter<OutputImageType>;
 
  ReaderType::Pointer reader = ReaderType::New();
  WriterType::Pointer writer = WriterType::New();
 
  reader->SetFileName(argv[1]);
  writer->SetFileName(argv[2]);
 
  const double angleInDegrees = std::stod(argv[3]);
 
  //  Software Guide : BeginLatex
  //
  //  The Resampling filter is instantiated and created just like in previous
  //  examples. The Transform is instantiated and connected to the resampling
  //  filter.
  //
  //  Software Guide : EndLatex
 
  // Software Guide : BeginCodeSnippet
  using FilterType =
    itk::ResampleImageFilter<InputImageType, OutputImageType>;
 
  FilterType::Pointer filter = FilterType::New();
 
  using TransformType = itk::AffineTransform<double, Dimension>;
 
  TransformType::Pointer transform = TransformType::New();
 
  filter->SetTransform(transform);
  // Software Guide : EndCodeSnippet
 
  //  Software Guide : BeginLatex
  //
  //  The salient feature of this example is the use of the
  //  \doxygen{BSplineInterpolateImageFunction}, which uses cubic BSplines in
  //  order to interpolate the resampled image.
  //
  //  Software Guide : EndLatex
 
  // Software Guide : BeginCodeSnippet
  using InterpolatorType =
    itk::BSplineInterpolateImageFunction<InputImageType, double>;
  InterpolatorType::Pointer interpolator = InterpolatorType::New();
 
  filter->SetInterpolator(interpolator);
 
  filter->SetDefaultPixelValue(100);
  // Software Guide : EndCodeSnippet
 
 
  //  Software Guide : BeginLatex
  //
  //  The parameters of the output image are taken from the input image.
  //
  //  Software Guide : EndLatex
 
  // Software Guide : BeginCodeSnippet
  reader->Update();
  const InputImageType::SpacingType & spacing =
    reader->GetOutput()->GetSpacing();
  const InputImageType::PointType & origin = reader->GetOutput()->GetOrigin();
  const InputImageType::DirectionType & direction =
    reader->GetOutput()->GetDirection();
  InputImageType::SizeType size =
    reader->GetOutput()->GetLargestPossibleRegion().GetSize();
  filter->SetOutputOrigin(origin);
  filter->SetOutputSpacing(spacing);
  filter->SetOutputDirection(direction);
  filter->SetSize(size);
  // Software Guide : EndCodeSnippet
 
 
  filter->SetInput(reader->GetOutput());
  writer->SetInput(filter->GetOutput());
 
 
  TransformType::OutputVectorType translation1;
 
  const double imageCenterX = origin[0] + spacing[0] * size[0] / 2.0;
  const double imageCenterY = origin[1] + spacing[1] * size[1] / 2.0;
 
  translation1[0] = -imageCenterX;
  translation1[1] = -imageCenterY;
 
  transform->Translate(translation1);
 
 
  std::cout << "imageCenterX = " << imageCenterX << std::endl;
  std::cout << "imageCenterY = " << imageCenterY << std::endl;
 
 
  const double degreesToRadians = std::atan(1.0) / 45.0;
  const double angle = angleInDegrees * degreesToRadians;
  transform->Rotate2D(-angle, false);
 
 
  TransformType::OutputVectorType translation2;
  translation2[0] = imageCenterX;
  translation2[1] = imageCenterY;
  transform->Translate(translation2, false);
 
 
  //  Software Guide : BeginLatex
  //
  //  The output of the resampling filter is connected to a writer and the
  //  execution of the pipeline is triggered by a writer update.
  //
  //  Software Guide : EndLatex
 
  // Software Guide : BeginCodeSnippet
  try
  {
    writer->Update();
  }
  catch (const itk::ExceptionObject & excep)
  {
    std::cerr << "Exception catched !" << std::endl;
    std::cerr << excep << std::endl;
  }
  // Software Guide : EndCodeSnippet
 
  return EXIT_SUCCESS;
}