#include <itkDemonsRegistrationFilter.h>

Inheritance diagram for itk::DemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >:

Collaboration diagram for itk::DemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >:

Public Types
using	ConstPointer = SmartPointer< const Self >

using	DemonsRegistrationFunctionType = DemonsRegistrationFunction< FixedImageType, MovingImageType, DisplacementFieldType >

using	DisplacementFieldPointer = typename Superclass::DisplacementFieldPointer

using	DisplacementFieldType = typename Superclass::DisplacementFieldType

using	FiniteDifferenceFunctionType = typename Superclass::FiniteDifferenceFunctionType

using	FixedImagePointer = typename Superclass::FixedImagePointer

using	FixedImageType = typename Superclass::FixedImageType

using	MovingImagePointer = typename Superclass::MovingImagePointer

using	MovingImageType = typename Superclass::MovingImageType

using	Pointer = SmartPointer< Self >

using	Self = DemonsRegistrationFilter

using	Superclass = PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >

using	TimeStepType = typename Superclass::TimeStepType

Public Types inherited from itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >
using	ConstPointer = SmartPointer< const Self >

using	DisplacementFieldPointer = typename DisplacementFieldType::Pointer

using	DisplacementFieldType = TDisplacementField

using	FiniteDifferenceFunctionType = typename Superclass::FiniteDifferenceFunctionType

using	FixedImageConstPointer = typename FixedImageType::ConstPointer

using	FixedImagePointer = typename FixedImageType::Pointer

using	FixedImageType = TFixedImage

using	MovingImageConstPointer = typename MovingImageType::ConstPointer

using	MovingImagePointer = typename MovingImageType::Pointer

using	MovingImageType = TMovingImage

using	OutputImageType = typename Superclass::OutputImageType

using	PDEDeformableRegistrationFunctionType = PDEDeformableRegistrationFunction< FixedImageType, MovingImageType, DisplacementFieldType >

using	Pointer = SmartPointer< Self >

using	Self = PDEDeformableRegistrationFilter

using	Superclass = DenseFiniteDifferenceImageFilter< TDisplacementField, TDisplacementField >

using	StandardDeviationsType = FixedArray< double, ImageDimension >

Public Types inherited from itk::DenseFiniteDifferenceImageFilter< TDisplacementField, TDisplacementField >
using	ConstPointer = SmartPointer< const Self >

using	FiniteDifferenceFunctionType = typename Superclass::FiniteDifferenceFunctionType

using	InputImageType = typename Superclass::InputImageType

using	OutputImageType = typename Superclass::OutputImageType

using	PixelType = typename Superclass::PixelType

using	Pointer = SmartPointer< Self >

using	Self = DenseFiniteDifferenceImageFilter

using	Superclass = FiniteDifferenceImageFilter< TDisplacementField, TDisplacementField >

using	TimeStepType = typename Superclass::TimeStepType

using	UpdateBufferType = OutputImageType

Public Types inherited from itk::FiniteDifferenceImageFilter< TDisplacementField, TDisplacementField >
using	ConstPointer = SmartPointer< const Self >

using	FiniteDifferenceFunctionType = FiniteDifferenceFunction< TDisplacementField >

using	InputImageType = TDisplacementField

using	InputPixelType = typename TDisplacementField ::PixelType

using	InputPixelValueType = typename NumericTraits< InputPixelType >::ValueType

using	NeighborhoodScalesType = typename FiniteDifferenceFunctionType::NeighborhoodScalesType

using	OutputImageType = TDisplacementField

using	OutputPixelType = typename TDisplacementField ::PixelType

using	OutputPixelValueType = typename NumericTraits< OutputPixelType >::ValueType

using	PixelType = OutputPixelType

using	Pointer = SmartPointer< Self >

using	RadiusType = typename FiniteDifferenceFunctionType::RadiusType

using	Self = FiniteDifferenceImageFilter

using	Superclass = InPlaceImageFilter< TDisplacementField, TDisplacementField >

using	TimeStepType = typename FiniteDifferenceFunctionType::TimeStepType

Public Types inherited from itk::InPlaceImageFilter< TDisplacementField, TDisplacementField >
using	ConstPointer = SmartPointer< const Self >

using	InputImageConstPointer = typename InputImageType::ConstPointer

using	InputImagePixelType = typename InputImageType::PixelType

using	InputImagePointer = typename InputImageType::Pointer

using	InputImageRegionType = typename InputImageType::RegionType

using	InputImageType = TDisplacementField

using	OutputImagePixelType = typename Superclass::OutputImagePixelType

using	OutputImagePointer = typename Superclass::OutputImagePointer

using	OutputImageRegionType = typename Superclass::OutputImageRegionType

using	OutputImageType = typename Superclass::OutputImageType

using	Pointer = SmartPointer< Self >

using	Self = InPlaceImageFilter

using	Superclass = ImageToImageFilter< TDisplacementField, TDisplacementField >

Public Types inherited from itk::ImageToImageFilter< TDisplacementField, TDisplacementField >
using	ConstPointer = SmartPointer< const Self >

using	InputImageConstPointer = typename InputImageType::ConstPointer

using	InputImagePixelType = typename InputImageType::PixelType

using	InputImagePointer = typename InputImageType::Pointer

using	InputImageRegionType = typename InputImageType::RegionType

using	InputImageType = TDisplacementField

using	OutputImagePixelType = typename Superclass::OutputImagePixelType

using	OutputImageRegionType = typename Superclass::OutputImageRegionType

using	Pointer = SmartPointer< Self >

using	Self = ImageToImageFilter

using	Superclass = ImageSource< TDisplacementField >

Public Types inherited from itk::ImageSource< TDisplacementField >
using	ConstPointer = SmartPointer< const Self >

using	DataObjectIdentifierType = Superclass::DataObjectIdentifierType

using	DataObjectPointer = DataObject::Pointer

using	DataObjectPointerArraySizeType = Superclass::DataObjectPointerArraySizeType

using	OutputImagePixelType = typename OutputImageType::PixelType

using	OutputImagePointer = typename OutputImageType::Pointer

using	OutputImageRegionType = typename OutputImageType::RegionType

using	OutputImageType = TDisplacementField

using	Pointer = SmartPointer< Self >

using	Self = ImageSource

using	Superclass = ProcessObject

Public Types inherited from itk::ProcessObject
using	ConstPointer = SmartPointer< const Self >

using	DataObjectIdentifierType = DataObject::DataObjectIdentifierType

using	DataObjectPointer = DataObject::Pointer

using	DataObjectPointerArray = std::vector< DataObjectPointer >

using	DataObjectPointerArraySizeType = DataObjectPointerArray::size_type

using	MultiThreaderType = MultiThreaderBase

using	NameArray = std::vector< DataObjectIdentifierType >

using	Pointer = SmartPointer< Self >

using	Self = ProcessObject

using	Superclass = Object

Public Types inherited from itk::Object
using	ConstPointer = SmartPointer< const Self >

using	Pointer = SmartPointer< Self >

using	Self = Object

using	Superclass = LightObject

Public Types inherited from itk::LightObject
using	ConstPointer = SmartPointer< const Self >

using	Pointer = SmartPointer< Self >

using	Self = LightObject

Public Member Functions
virtual ::itk::LightObject::Pointer	CreateAnother () const

virtual double	GetMetric () const

virtual const char *	GetNameOfClass () const

Public Member Functions inherited from itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >
virtual ::itk::LightObject::Pointer	CreateAnother () const

DisplacementFieldType *	GetDisplacementField ()

virtual const FixedImageType *	GetFixedImage () const

virtual const DisplacementFieldType *	GetInitialDisplacementField () const

virtual const MovingImageType *	GetMovingImage () const

std::vector< SmartPointer< DataObject > >::size_type	GetNumberOfValidRequiredInputs () const override

virtual void	SetFixedImage (const FixedImageType *input)

virtual void	SetInitialDisplacementField (const DisplacementFieldType *input)

virtual void	SetMovingImage (const MovingImageType *input)

virtual void	SetSmoothDisplacementField (bool _arg)

virtual bool	GetSmoothDisplacementField () const

virtual void	SmoothDisplacementFieldOn ()

virtual void	SmoothDisplacementFieldOff ()

virtual void	SetStandardDeviations (StandardDeviationsType _arg)

virtual void	SetStandardDeviations (double value)

virtual const StandardDeviationsType &	GetStandardDeviations () const

virtual void	SetSmoothUpdateField (bool _arg)

virtual bool	GetSmoothUpdateField () const

virtual void	SmoothUpdateFieldOn ()

virtual void	SmoothUpdateFieldOff ()

virtual void	SetUpdateFieldStandardDeviations (StandardDeviationsType _arg)

virtual void	SetUpdateFieldStandardDeviations (double value)

virtual const StandardDeviationsType &	GetUpdateFieldStandardDeviations () const

virtual void	StopRegistration ()

virtual void	SetMaximumError (double _arg)

virtual double	GetMaximumError () const

virtual void	SetMaximumKernelWidth (unsigned int _arg)

virtual unsigned int	GetMaximumKernelWidth () const

Public Member Functions inherited from itk::FiniteDifferenceImageFilter< TDisplacementField, TDisplacementField >
virtual const FiniteDifferenceFunctionType ::Pointer &	GetDifferenceFunction () const

virtual const IdentifierType &	GetElapsedIterations () const

virtual void	SetDifferenceFunction (FiniteDifferenceFunctionType *_arg)

virtual void	SetNumberOfIterations (IdentifierType _arg)

virtual const IdentifierType &	GetNumberOfIterations () const

virtual void	SetUseImageSpacing (bool _arg)

virtual void	UseImageSpacingOn ()

virtual void	UseImageSpacingOff ()

virtual const bool &	GetUseImageSpacing () const

virtual void	SetMaximumRMSError (double _arg)

virtual const double &	GetMaximumRMSError () const

virtual void	SetRMSChange (double _arg)

virtual const double &	GetRMSChange () const

virtual void	SetManualReinitialization (bool _arg)

virtual const bool &	GetManualReinitialization () const

virtual void	ManualReinitializationOn ()

virtual void	ManualReinitializationOff ()

virtual void	SetIsInitialized (bool _arg)

virtual bool	GetIsInitialized ()

void	SetStateToUninitialized ()

void	SetStateToInitialized ()

Public Member Functions inherited from itk::InPlaceImageFilter< TDisplacementField, TDisplacementField >
virtual void	SetInPlace (bool _arg)

virtual bool	GetInPlace () const

virtual void	InPlaceOn ()

virtual void	InPlaceOff ()

virtual bool	CanRunInPlace () const

Public Member Functions inherited from itk::ImageToImageFilter< TDisplacementField, TDisplacementField >
const InputImageType *	GetInput () const

const InputImageType *	GetInput (unsigned int idx) const

void	PopBackInput () override

void	PopFrontInput () override

virtual void	PushBackInput (const InputImageType *input)

virtual void	PushFrontInput (const InputImageType *input)

virtual void	SetInput (const DataObjectIdentifierType &key, DataObject *input)

virtual void	SetInput (const InputImageType *input)

virtual void	SetInput (unsigned int, const TDisplacementField *image)

virtual void	SetCoordinateTolerance (double _arg)

virtual double	GetCoordinateTolerance () const

virtual void	SetDirectionTolerance (double _arg)

virtual double	GetDirectionTolerance () const

Public Member Functions inherited from itk::ImageSource< TDisplacementField >
OutputImageType *	GetOutput ()

const OutputImageType *	GetOutput () const

OutputImageType *	GetOutput (unsigned int idx)

virtual void	GraftOutput (DataObject *graft)

virtual void	GraftOutput (const DataObjectIdentifierType &key, DataObject *graft)

virtual void	GraftNthOutput (unsigned int idx, DataObject *graft)

ProcessObject::DataObjectPointer	MakeOutput (ProcessObject::DataObjectPointerArraySizeType idx) override

ProcessObject::DataObjectPointer	MakeOutput (const ProcessObject::DataObjectIdentifierType &) override

Public Member Functions inherited from itk::ProcessObject
virtual void	AbortGenerateDataOff ()

virtual void	AbortGenerateDataOn ()

virtual void	EnlargeOutputRequestedRegion (DataObject *)

virtual const bool &	GetAbortGenerateData () const

DataObjectPointerArray	GetIndexedInputs ()

DataObjectPointerArray	GetIndexedOutputs ()

NameArray	GetInputNames () const

DataObjectPointerArray	GetInputs ()

DataObjectPointerArraySizeType	GetNumberOfIndexedInputs () const

DataObjectPointerArraySizeType	GetNumberOfIndexedOutputs () const

DataObjectPointerArraySizeType	GetNumberOfInputs () const

DataObjectPointerArraySizeType	GetNumberOfOutputs () const

NameArray	GetOutputNames () const

DataObjectPointerArray	GetOutputs ()

virtual float	GetProgress () const

NameArray	GetRequiredInputNames () const

bool	HasInput (const DataObjectIdentifierType &key) const

bool	HasOutput (const DataObjectIdentifierType &key) const

void	IncrementProgress (float increment)

virtual void	PropagateRequestedRegion (DataObject *output)

virtual void	ResetPipeline ()

virtual void	SetAbortGenerateData (bool _arg)

virtual void	Update ()

virtual void	UpdateLargestPossibleRegion ()

virtual void	UpdateOutputData (DataObject *output)

virtual void	UpdateOutputInformation ()

void	UpdateProgress (float progress)

virtual void	SetReleaseDataFlag (bool val)

virtual bool	GetReleaseDataFlag () const

void	ReleaseDataFlagOn ()

void	ReleaseDataFlagOff ()

virtual void	SetReleaseDataBeforeUpdateFlag (bool _arg)

virtual const bool &	GetReleaseDataBeforeUpdateFlag () const

virtual void	ReleaseDataBeforeUpdateFlagOn ()

virtual void	ReleaseDataBeforeUpdateFlagOff ()

virtual void	SetNumberOfWorkUnits (ThreadIdType _arg)

virtual const ThreadIdType &	GetNumberOfWorkUnits () const

MultiThreaderType *	GetMultiThreader () const

void	SetMultiThreader (MultiThreaderType *threader)

virtual void	PrepareOutputs ()

Public Member Functions inherited from itk::Object
unsigned long	AddObserver (const EventObject &event, Command *)

unsigned long	AddObserver (const EventObject &event, Command *) const

unsigned long	AddObserver (const EventObject &event, std::function< void(const EventObject &)> function) const

virtual void	DebugOff () const

virtual void	DebugOn () const

Command *	GetCommand (unsigned long tag)

bool	GetDebug () const

MetaDataDictionary &	GetMetaDataDictionary ()

const MetaDataDictionary &	GetMetaDataDictionary () const

virtual ModifiedTimeType	GetMTime () const

virtual const TimeStamp &	GetTimeStamp () const

bool	HasObserver (const EventObject &event) const

void	InvokeEvent (const EventObject &)

void	InvokeEvent (const EventObject &) const

virtual void	Modified () const

void	Register () const override

void	RemoveAllObservers ()

void	RemoveObserver (unsigned long tag)

void	SetDebug (bool debugFlag) const

void	SetReferenceCount (int) override

void	UnRegister () const noexcept override

void	SetMetaDataDictionary (const MetaDataDictionary &rhs)

void	SetMetaDataDictionary (MetaDataDictionary &&rrhs)

virtual void	SetObjectName (std::string _arg)

virtual const std::string &	GetObjectName () const

Public Member Functions inherited from itk::LightObject
Pointer	Clone () const

virtual void	Delete ()

virtual int	GetReferenceCount () const

void	Print (std::ostream &os, Indent indent=0) const

Static Public Member Functions
static Pointer	New ()

Static Public Member Functions inherited from itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >
static Pointer	New ()

Static Public Member Functions inherited from itk::ImageToImageFilter< TDisplacementField, TDisplacementField >
static void	SetGlobalDefaultDirectionTolerance (double)

static double	GetGlobalDefaultDirectionTolerance ()

static void	SetGlobalDefaultCoordinateTolerance (double)

static double	GetGlobalDefaultCoordinateTolerance ()

Static Public Member Functions inherited from itk::Object
static bool	GetGlobalWarningDisplay ()

static void	GlobalWarningDisplayOff ()

static void	GlobalWarningDisplayOn ()

static Pointer	New ()

static void	SetGlobalWarningDisplay (bool val)

Static Public Member Functions inherited from itk::LightObject
static void	BreakOnError ()

static Pointer	New ()

bool	m_UseMovingImageGradient

virtual void	SetUseMovingImageGradient (bool _arg)

virtual bool	GetUseMovingImageGradient () const

virtual void	UseMovingImageGradientOn ()

virtual void	UseMovingImageGradientOff ()

virtual void	SetIntensityDifferenceThreshold (double)

virtual double	GetIntensityDifferenceThreshold () const

	DemonsRegistrationFilter ()

	~DemonsRegistrationFilter () override=default

void	PrintSelf (std::ostream &os, Indent indent) const override

void	InitializeIteration () override

void	ApplyUpdate (const TimeStepType &dt) override

void	VerifyInputInformation () ITKv5_CONST override

Additional Inherited Members
Static Public Attributes inherited from itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >
static constexpr unsigned int	ImageDimension = Superclass::ImageDimension

Static Public Attributes inherited from itk::DenseFiniteDifferenceImageFilter< TDisplacementField, TDisplacementField >
static constexpr unsigned int	ImageDimension

Static Public Attributes inherited from itk::FiniteDifferenceImageFilter< TDisplacementField, TDisplacementField >
static constexpr unsigned int	ImageDimension

Static Public Attributes inherited from itk::InPlaceImageFilter< TDisplacementField, TDisplacementField >
static constexpr unsigned int	InputImageDimension

static constexpr unsigned int	OutputImageDimension

Static Public Attributes inherited from itk::ImageToImageFilter< TDisplacementField, TDisplacementField >
static constexpr unsigned int	InputImageDimension

static constexpr unsigned int	OutputImageDimension

Static Public Attributes inherited from itk::ImageSource< TDisplacementField >
static constexpr unsigned int	OutputImageDimension

Protected Types inherited from itk::DenseFiniteDifferenceImageFilter< TDisplacementField, TDisplacementField >
using	ThreadRegionType = typename UpdateBufferType::RegionType

Protected Types inherited from itk::ImageToImageFilter< TDisplacementField, TDisplacementField >
using	InputToOutputRegionCopierType = ImageToImageFilterDetail::ImageRegionCopier< Self::OutputImageDimension, Self::InputImageDimension >

using	OutputToInputRegionCopierType = ImageToImageFilterDetail::ImageRegionCopier< Self::InputImageDimension, Self::OutputImageDimension >

Protected Member Functions inherited from itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >
	PDEDeformableRegistrationFilter ()

	~PDEDeformableRegistrationFilter () override=default

void	PrintSelf (std::ostream &os, Indent indent) const override

bool	Halt () override

void	CopyInputToOutput () override

void	InitializeIteration () override

virtual void	SmoothDisplacementField ()

virtual void	SmoothUpdateField ()

void	PostProcessOutput () override

void	Initialize () override

void	GenerateOutputInformation () override

void	GenerateInputRequestedRegion () override

Protected Member Functions inherited from itk::DenseFiniteDifferenceImageFilter< TDisplacementField, TDisplacementField >
void	AllocateUpdateBuffer () override

void	ApplyUpdate (const TimeStepType &dt) override

TimeStepType	CalculateChange () override

void	CopyInputToOutput () override

	DenseFiniteDifferenceImageFilter ()

virtual UpdateBufferType *	GetUpdateBuffer ()

void	PrintSelf (std::ostream &os, Indent indent) const override

virtual void	ThreadedApplyUpdate (const TimeStepType &dt, const ThreadRegionType &regionToProcess, ThreadIdType threadId)

virtual TimeStepType	ThreadedCalculateChange (const ThreadRegionType &regionToProcess, ThreadIdType threadId)

	~DenseFiniteDifferenceImageFilter () override=default

Protected Member Functions inherited from itk::FiniteDifferenceImageFilter< TDisplacementField, TDisplacementField >
	FiniteDifferenceImageFilter ()

	~FiniteDifferenceImageFilter () override=default

void	PrintSelf (std::ostream &os, Indent indent) const override

virtual void	ApplyUpdate (const TimeStepType &dt)=0

void	GenerateData () override

void	GenerateInputRequestedRegion () override

virtual bool	ThreadedHalt (void *)

virtual TimeStepType	ResolveTimeStep (const std::vector< TimeStepType > &timeStepList, const std::vector< bool > &valid) const

virtual void	SetElapsedIterations (IdentifierType _arg)

Protected Member Functions inherited from itk::InPlaceImageFilter< TDisplacementField, TDisplacementField >
	InPlaceImageFilter ()=default

	~InPlaceImageFilter () override=default

void	AllocateOutputs () override

void	ReleaseInputs () override

virtual bool	GetRunningInPlace () const

Protected Member Functions inherited from itk::ImageToImageFilter< TDisplacementField, TDisplacementField >
void	PushBackInput (const DataObject *input) override

void	PushFrontInput (const DataObject *input) override

	ImageToImageFilter ()

	~ImageToImageFilter () override=default

void	VerifyInputInformation () ITKv5_CONST override

virtual void	CallCopyOutputRegionToInputRegion (InputImageRegionType &destRegion, const OutputImageRegionType &srcRegion)

virtual void	CallCopyInputRegionToOutputRegion (OutputImageRegionType &destRegion, const InputImageRegionType &srcRegion)

Protected Member Functions inherited from itk::ImageSource< TDisplacementField >
	ImageSource ()

	~ImageSource () override=default

void	ClassicMultiThread (ThreadFunctionType callbackFunction)

virtual void	ThreadedGenerateData (const OutputImageRegionType &region, ThreadIdType threadId)

virtual void	DynamicThreadedGenerateData (const OutputImageRegionType &outputRegionForThread)

virtual void	BeforeThreadedGenerateData ()

virtual void	AfterThreadedGenerateData ()

virtual const ImageRegionSplitterBase *	GetImageRegionSplitter () const

virtual unsigned int	SplitRequestedRegion (unsigned int i, unsigned int pieces, OutputImageRegionType &splitRegion)

virtual bool	GetDynamicMultiThreading () const

virtual void	SetDynamicMultiThreading (bool _arg)

virtual void	DynamicMultiThreadingOn ()

virtual void	DynamicMultiThreadingOff ()

Protected Member Functions inherited from itk::ProcessObject
	ProcessObject ()

	~ProcessObject () override

DataObject *	GetInput (const DataObjectIdentifierType &key)

const DataObject *	GetInput (const DataObjectIdentifierType &key) const

DataObject *	GetInput (DataObjectPointerArraySizeType idx)

const DataObject *	GetInput (DataObjectPointerArraySizeType idx) const

virtual void	SetInput (const DataObjectIdentifierType &key, DataObject *input)

virtual void	SetNthInput (DataObjectPointerArraySizeType idx, DataObject *input)

virtual void	AddInput (DataObject *input)

virtual void	RemoveInput (const DataObjectIdentifierType &key)

virtual void	RemoveInput (DataObjectPointerArraySizeType)

DataObject *	GetPrimaryInput ()

const DataObject *	GetPrimaryInput () const

virtual void	SetPrimaryInputName (const DataObjectIdentifierType &key)

virtual const char *	GetPrimaryInputName () const

virtual void	SetPrimaryInput (DataObject *object)

void	SetNumberOfIndexedInputs (DataObjectPointerArraySizeType num)

virtual void	SetNumberOfRequiredInputs (DataObjectPointerArraySizeType)

virtual const DataObjectPointerArraySizeType &	GetNumberOfRequiredInputs () const

bool	RemoveRequiredInputName (const DataObjectIdentifierType &)

bool	IsRequiredInputName (const DataObjectIdentifierType &) const

void	SetRequiredInputNames (const NameArray &)

bool	AddRequiredInputName (const DataObjectIdentifierType &)

bool	AddRequiredInputName (const DataObjectIdentifierType &, DataObjectPointerArraySizeType idx)

void	AddOptionalInputName (const DataObjectIdentifierType &)

void	AddOptionalInputName (const DataObjectIdentifierType &, DataObjectPointerArraySizeType idx)

DataObject *	GetOutput (const DataObjectIdentifierType &key)

const DataObject *	GetOutput (const DataObjectIdentifierType &key) const

virtual void	SetPrimaryOutputName (const DataObjectIdentifierType &key)

virtual const char *	GetPrimaryOutputName () const

DataObject *	GetOutput (DataObjectPointerArraySizeType i)

const DataObject *	GetOutput (DataObjectPointerArraySizeType i) const

virtual void	SetOutput (const DataObjectIdentifierType &name, DataObject *output)

virtual void	RemoveOutput (const DataObjectIdentifierType &key)

DataObject *	GetPrimaryOutput ()

const DataObject *	GetPrimaryOutput () const

virtual void	SetPrimaryOutput (DataObject *object)

virtual void	SetNthOutput (DataObjectPointerArraySizeType idx, DataObject *output)

virtual void	AddOutput (DataObject *output)

virtual void	RemoveOutput (DataObjectPointerArraySizeType idx)

virtual void	SetNumberOfRequiredOutputs (DataObjectPointerArraySizeType _arg)

virtual const DataObjectPointerArraySizeType &	GetNumberOfRequiredOutputs () const

void	SetNumberOfIndexedOutputs (DataObjectPointerArraySizeType num)

DataObjectIdentifierType	MakeNameFromInputIndex (DataObjectPointerArraySizeType idx) const

DataObjectIdentifierType	MakeNameFromOutputIndex (DataObjectPointerArraySizeType idx) const

DataObjectPointerArraySizeType	MakeIndexFromInputName (const DataObjectIdentifierType &name) const

DataObjectPointerArraySizeType	MakeIndexFromOutputName (const DataObjectIdentifierType &name) const

bool	IsIndexedInputName (const DataObjectIdentifierType &) const

bool	IsIndexedOutputName (const DataObjectIdentifierType &) const

virtual void	VerifyPreconditions () ITKv5_CONST

virtual void	GenerateOutputRequestedRegion (DataObject *output)

virtual void	PropagateResetPipeline ()

virtual void	CacheInputReleaseDataFlags ()

virtual void	RestoreInputReleaseDataFlags ()

virtual bool	GetThreaderUpdateProgress () const

virtual void	ThreaderUpdateProgressOn ()

virtual void	ThreaderUpdateProgressOff ()

virtual void	SetThreaderUpdateProgress (bool arg)

Protected Member Functions inherited from itk::Object
	Object ()

	~Object () override

bool	PrintObservers (std::ostream &os, Indent indent) const

virtual void	SetTimeStamp (const TimeStamp &timeStamp)

Protected Member Functions inherited from itk::LightObject
virtual LightObject::Pointer	InternalClone () const

	LightObject ()

virtual void	PrintHeader (std::ostream &os, Indent indent) const

virtual void	PrintTrailer (std::ostream &os, Indent indent) const

virtual	~LightObject ()

Static Protected Member Functions inherited from itk::ImageSource< TDisplacementField >
static const ImageRegionSplitterBase *	GetGlobalDefaultSplitter ()

static ITK_THREAD_RETURN_FUNCTION_CALL_CONVENTION	ThreaderCallback (void *arg)

Static Protected Member Functions inherited from itk::ProcessObject
static constexpr float	progressFixedToFloat (uint32_t fixed)

static uint32_t	progressFloatToFixed (float f)

Protected Attributes inherited from itk::FiniteDifferenceImageFilter< TDisplacementField, TDisplacementField >
bool	m_IsInitialized

IdentifierType	m_NumberOfIterations

IdentifierType	m_ElapsedIterations

bool	m_ManualReinitialization

double	m_RMSChange

double	m_MaximumRMSError

Protected Attributes inherited from itk::ImageSource< TDisplacementField >
bool	m_DynamicMultiThreading

Protected Attributes inherited from itk::ProcessObject
bool	m_Updating

TimeStamp	m_OutputInformationMTime

Protected Attributes inherited from itk::LightObject
std::atomic< int >	m_ReferenceCount

Detailed Description

template<typename TFixedImage, typename TMovingImage, typename TDisplacementField>
class itk::DemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >

Deformably register two images using the demons algorithm.

DemonsRegistrationFilter implements the demons deformable algorithm that register two images by computing the displacement field which will map a moving image onto a fixed image.

A displacement field is represented as a image whose pixel type is some vector type with at least N elements, where N is the dimension of the fixed image. The vector type must support element access via operator []. It is assumed that the vector elements behave like floating point scalars.

This class is templated over the fixed image type, moving image type and the displacement field type.

The input fixed and moving images are set via methods SetFixedImage and SetMovingImage respectively. An initial displacement field maybe set via SetInitialDisplacementField or SetInput. If no initial field is set, a zero field is used as the initial condition.

The algorithm has one parameters: the number of iteration to be performed.

The output displacement field can be obtained via methods GetOutput or GetDisplacementField.

This class make use of the finite difference solver hierarchy. Update for each iteration is computed in DemonsRegistrationFunction.

Warning: This filter assumes that the fixed image type, moving image type and displacement field type all have the same number of dimensions.

See also: DemonsRegistrationFunction

Examples: Examples/RegistrationITKv4/DeformableRegistration16.cxx, and Examples/RegistrationITKv4/DeformableRegistration2.cxx.

Definition at line 63 of file itkDemonsRegistrationFilter.h.

Member Typedef Documentation

◆ ConstPointer

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >

using itk::DemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::ConstPointer = SmartPointer<const Self>

Definition at line 73 of file itkDemonsRegistrationFilter.h.

◆ DemonsRegistrationFunctionType

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >

using itk::DemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::DemonsRegistrationFunctionType = DemonsRegistrationFunction<FixedImageType, MovingImageType, DisplacementFieldType>

DemonsRegistrationFilterFunction type.

Definition at line 101 of file itkDemonsRegistrationFilter.h.

◆ DisplacementFieldPointer

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >

using itk::DemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::DisplacementFieldPointer = typename Superclass::DisplacementFieldPointer

Definition at line 94 of file itkDemonsRegistrationFilter.h.

◆ DisplacementFieldType

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >

using itk::DemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::DisplacementFieldType = typename Superclass::DisplacementFieldType

displacement field type.

Definition at line 93 of file itkDemonsRegistrationFilter.h.

◆ FiniteDifferenceFunctionType

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >

using itk::DemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::FiniteDifferenceFunctionType = typename Superclass::FiniteDifferenceFunctionType

FiniteDifferenceFunction type.

Definition at line 97 of file itkDemonsRegistrationFilter.h.

◆ FixedImagePointer

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >

using itk::DemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::FixedImagePointer = typename Superclass::FixedImagePointer

Definition at line 86 of file itkDemonsRegistrationFilter.h.

◆ FixedImageType

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >

using itk::DemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::FixedImageType = typename Superclass::FixedImageType

FixedImage image type.

Definition at line 85 of file itkDemonsRegistrationFilter.h.

◆ MovingImagePointer

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >

using itk::DemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::MovingImagePointer = typename Superclass::MovingImagePointer

Definition at line 90 of file itkDemonsRegistrationFilter.h.

◆ MovingImageType

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >

using itk::DemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::MovingImageType = typename Superclass::MovingImageType

MovingImage image type.

Definition at line 89 of file itkDemonsRegistrationFilter.h.

◆ Pointer

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >

using itk::DemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::Pointer = SmartPointer<Self>

Definition at line 72 of file itkDemonsRegistrationFilter.h.

◆ Self

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >

using itk::DemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::Self = DemonsRegistrationFilter

Standard class type aliases.

Definition at line 70 of file itkDemonsRegistrationFilter.h.

◆ Superclass

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >

using itk::DemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::Superclass = PDEDeformableRegistrationFilter<TFixedImage, TMovingImage, TDisplacementField>

Definition at line 71 of file itkDemonsRegistrationFilter.h.

◆ TimeStepType

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >

using itk::DemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::TimeStepType = typename Superclass::TimeStepType

Inherit types from superclass.

Definition at line 82 of file itkDemonsRegistrationFilter.h.

Constructor & Destructor Documentation

◆ DemonsRegistrationFilter()

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >

itk::DemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::DemonsRegistrationFilter ( )

protected

Switch between using the fixed image and moving image gradient for computing the displacement field updates.

◆ ~DemonsRegistrationFilter()

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >

itk::DemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::~DemonsRegistrationFilter ( )

overrideprotecteddefault

Switch between using the fixed image and moving image gradient for computing the displacement field updates.

Member Function Documentation

◆ ApplyUpdate()

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >

void itk::DemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::ApplyUpdate ( const TimeStepType & dt )

overrideprotected

Apply update.

◆ CreateAnother()

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >

virtual::itk::LightObject::Pointer itk::DemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::CreateAnother ( ) const

virtual

Create an object from an instance, potentially deferring to a factory. This method allows you to create an instance of an object that is exactly the same type as the referring object. This is useful in cases where an object has been cast back to a base class.

Reimplemented from itk::Object.

◆ GetIntensityDifferenceThreshold()

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >

virtual double itk::DemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::GetIntensityDifferenceThreshold ( ) const

virtual

Switch between using the fixed image and moving image gradient for computing the displacement field updates.

◆ GetMetric()

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >

virtual double itk::DemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::GetMetric ( ) const

virtual

Get the metric value. The metric value is the mean square difference in intensity between the fixed image and transforming moving image computed over the the overlapping region between the two images. This is value is only available for the previous iteration and NOT the current iteration.

◆ GetNameOfClass()

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >

virtual const char* itk::DemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::GetNameOfClass ( ) const

virtual

Run-time type information (and related methods).

Reimplemented from itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >.

◆ GetUseMovingImageGradient()

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >

virtual bool itk::DemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::GetUseMovingImageGradient ( ) const

virtual

Switch between using the fixed image and moving image gradient for computing the displacement field updates.

◆ InitializeIteration()

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >

void itk::DemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::InitializeIteration ( )

overrideprotectedvirtual

Initialize the state of filter and equation before each iteration.

Reimplemented from itk::FiniteDifferenceImageFilter< TDisplacementField, TDisplacementField >.

◆ New()

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >

static Pointer itk::DemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::New ( )

static

Method for creation through the object factory.

◆ PrintSelf()

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >

void itk::DemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::PrintSelf	(	std::ostream &	os,
		Indent	indent
	)		const

overrideprotectedvirtual

Switch between using the fixed image and moving image gradient for computing the displacement field updates.

Reimplemented from itk::ProcessObject.

◆ SetIntensityDifferenceThreshold()

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >

virtual void itk::DemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::SetIntensityDifferenceThreshold ( double )

virtual

Set/Get the threshold below which the absolute difference of intensity yields a match. When the intensities match between a moving and fixed image pixel, the update vector (for that iteration) will be the zero vector. Default is 0.001.

◆ SetUseMovingImageGradient()

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >

virtual void itk::DemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::SetUseMovingImageGradient ( bool _arg )

virtual

Switch between using the fixed image and moving image gradient for computing the displacement field updates.

◆ UseMovingImageGradientOff()

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >

virtual void itk::DemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::UseMovingImageGradientOff ( )

virtual

Switch between using the fixed image and moving image gradient for computing the displacement field updates.

◆ UseMovingImageGradientOn()

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >

virtual void itk::DemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::UseMovingImageGradientOn ( )

virtual

Switch between using the fixed image and moving image gradient for computing the displacement field updates.

◆ VerifyInputInformation()

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >

void itk::DemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::VerifyInputInformation ( )

inlineoverrideprotectedvirtual

Override VerifyInputInformation() since this filter's inputs do not need to occupy the same physical space.

See also: ProcessObject::VerifyInputInformation

Reimplemented from itk::ProcessObject.

Definition at line 148 of file itkDemonsRegistrationFilter.h.

Member Data Documentation

◆ m_UseMovingImageGradient

template<typename TFixedImage , typename TMovingImage , typename TDisplacementField >

bool itk::DemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >::m_UseMovingImageGradient

private

Switch between using the fixed image and moving image gradient for computing the displacement field updates.

Definition at line 152 of file itkDemonsRegistrationFilter.h.

The documentation for this class was generated from the following file:

itkDemonsRegistrationFilter.h

Public Types

Public Member Functions

Static Public Member Functions

Additional Inherited Members

Detailed Description

template<typename TFixedImage, typename TMovingImage, typename TDisplacementField> class itk::DemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >

Member Typedef Documentation

◆ ConstPointer

◆ DemonsRegistrationFunctionType

◆ DisplacementFieldPointer

◆ DisplacementFieldType

◆ FiniteDifferenceFunctionType

◆ FixedImagePointer

◆ FixedImageType

◆ MovingImagePointer

◆ MovingImageType

◆ Pointer

◆ Self

◆ Superclass

◆ TimeStepType

Constructor & Destructor Documentation

◆ DemonsRegistrationFilter()

◆ ~DemonsRegistrationFilter()

Member Function Documentation

◆ ApplyUpdate()

◆ CreateAnother()

◆ GetIntensityDifferenceThreshold()

◆ GetMetric()

◆ GetNameOfClass()

◆ GetUseMovingImageGradient()

◆ InitializeIteration()

◆ New()

◆ PrintSelf()

◆ SetIntensityDifferenceThreshold()

◆ SetUseMovingImageGradient()

◆ UseMovingImageGradientOff()

◆ UseMovingImageGradientOn()

◆ VerifyInputInformation()

Member Data Documentation

◆ m_UseMovingImageGradient

template<typename TFixedImage, typename TMovingImage, typename TDisplacementField>
class itk::DemonsRegistrationFilter< TFixedImage, TMovingImage, TDisplacementField >