ITK
5.2.0
Insight Toolkit
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#include <itkGeodesicActiveContourShapePriorLevelSetFunction.h>
Public Types | |
using | ConstPointer = SmartPointer< const Self > |
using | FeatureImageType = TFeatureImageType |
using | FeatureScalarType = typename Superclass::FeatureScalarType |
using | FloatOffsetType = typename Superclass::FloatOffsetType |
using | GlobalDataStruct = typename Superclass::GlobalDataStruct |
using | ImageType = typename Superclass::ImageType |
using | NeighborhoodType = typename Superclass::NeighborhoodType |
using | Pointer = SmartPointer< Self > |
using | RadiusType = typename Superclass::RadiusType |
using | ScalarValueType = typename Superclass::ScalarValueType |
using | Self = GeodesicActiveContourShapePriorLevelSetFunction |
using | Superclass = ShapePriorSegmentationLevelSetFunction< TImageType, TFeatureImageType > |
using | VectorImageType = typename Superclass::VectorImageType |
Public Types inherited from itk::ShapePriorSegmentationLevelSetFunction< TImageType, TFeatureImageType > | |
using | ConstPointer = SmartPointer< const Self > |
using | ContinuousIndexType = typename Superclass::ContinuousIndexType |
using | FeatureImageType = TFeatureImageType |
using | FeatureScalarType = typename Superclass::FeatureScalarType |
using | FloatOffsetType = typename Superclass::FloatOffsetType |
using | ImageType = typename Superclass::ImageType |
using | IndexType = typename Superclass::IndexType |
using | NeighborhoodType = typename Superclass::NeighborhoodType |
using | PixelType = typename Superclass::PixelType |
using | Pointer = SmartPointer< Self > |
using | RadiusType = typename Superclass::RadiusType |
using | ScalarValueType = typename Superclass::ScalarValueType |
using | Self = ShapePriorSegmentationLevelSetFunction |
using | ShapeFunctionPointer = typename ShapeFunctionType::ConstPointer |
using | ShapeFunctionType = ShapeSignedDistanceFunction< double, Self::ImageDimension > |
using | Superclass = SegmentationLevelSetFunction< TImageType, TFeatureImageType > |
using | TimeStepType = typename Superclass::TimeStepType |
using | VectorImageType = typename Superclass::VectorImageType |
using | GlobalDataStruct = typename Superclass::GlobalDataStruct |
Public Types inherited from itk::SegmentationLevelSetFunction< TImageType, TFeatureImageType > | |
using | ConstPointer = SmartPointer< const Self > |
using | ContinuousIndexType = typename InterpolatorType::ContinuousIndexType |
using | FeatureImageType = TFeatureImageType |
using | FeatureScalarType = typename FeatureImageType::PixelType |
using | FloatOffsetType = typename Superclass::FloatOffsetType |
using | GlobalDataStruct = typename Superclass::GlobalDataStruct |
using | ImageType = typename Superclass::ImageType |
using | IndexType = typename ImageType::IndexType |
using | InterpolatorType = LinearInterpolateImageFunction< ImageType > |
using | NeighborhoodType = typename Superclass::NeighborhoodType |
using | PixelRealType = typename Superclass::PixelRealType |
using | Pointer = SmartPointer< Self > |
using | RadiusType = typename Superclass::RadiusType |
using | ScalarValueType = typename Superclass::ScalarValueType |
using | Self = SegmentationLevelSetFunction |
using | Superclass = LevelSetFunction< TImageType > |
using | VectorImageType = Image< VectorType, Self::ImageDimension > |
using | VectorInterpolatorType = VectorLinearInterpolateImageFunction< VectorImageType > |
using | VectorType = typename Superclass::VectorType |
Public Types inherited from itk::LevelSetFunction< TImageType > | |
using | ConstPointer = SmartPointer< const Self > |
using | FloatOffsetType = typename Superclass::FloatOffsetType |
using | ImageType = typename Superclass::ImageType |
using | NeighborhoodScalesType = typename Superclass::NeighborhoodScalesType |
using | NeighborhoodType = typename Superclass::NeighborhoodType |
using | PixelRealType = typename Superclass::PixelRealType |
using | PixelType = typename Superclass::PixelType |
using | Pointer = SmartPointer< Self > |
using | RadiusType = typename Superclass::RadiusType |
using | ScalarValueType = PixelType |
using | Self = LevelSetFunction |
using | Superclass = FiniteDifferenceFunction< TImageType > |
using | TimeStepType = double |
using | VectorType = FixedArray< ScalarValueType, Self::ImageDimension > |
Public Types inherited from itk::FiniteDifferenceFunction< TImageType > | |
using | ConstPointer = SmartPointer< const Self > |
using | DefaultBoundaryConditionType = ZeroFluxNeumannBoundaryCondition< ImageType > |
using | FloatOffsetType = Vector< float, Self::ImageDimension > |
using | ImageType = TImageType |
using | NeighborhoodScalesType = Vector< PixelRealType, Self::ImageDimension > |
using | NeighborhoodType = ConstNeighborhoodIterator< TImageType, DefaultBoundaryConditionType > |
using | PixelRealType = double |
using | PixelType = typename ImageType::PixelType |
using | Pointer = SmartPointer< Self > |
using | RadiusType = typename ConstNeighborhoodIterator< TImageType >::RadiusType |
using | Self = FiniteDifferenceFunction |
using | Superclass = LightObject |
using | TimeStepType = double |
Public Types inherited from itk::LightObject | |
using | ConstPointer = SmartPointer< const Self > |
using | Pointer = SmartPointer< Self > |
using | Self = LightObject |
Static Public Member Functions | |
static Pointer | New () |
Static Public Member Functions inherited from itk::ShapePriorSegmentationLevelSetFunction< TImageType, TFeatureImageType > | |
static Pointer | New () |
Static Public Member Functions inherited from itk::LevelSetFunction< TImageType > | |
static Pointer | New () |
static void | SetMaximumCurvatureTimeStep (double n) |
static double | GetMaximumCurvatureTimeStep () |
static void | SetMaximumPropagationTimeStep (double n) |
static double | GetMaximumPropagationTimeStep () |
Static Public Member Functions inherited from itk::LightObject | |
static void | BreakOnError () |
static Pointer | New () |
Static Public Attributes | |
static constexpr unsigned int | ImageDimension = Superclass::ImageDimension |
Static Public Attributes inherited from itk::ShapePriorSegmentationLevelSetFunction< TImageType, TFeatureImageType > | |
static constexpr unsigned int | ImageDimension = Superclass::ImageDimension |
Static Public Attributes inherited from itk::SegmentationLevelSetFunction< TImageType, TFeatureImageType > | |
static constexpr unsigned int | ImageDimension = Superclass::ImageDimension |
Static Public Attributes inherited from itk::LevelSetFunction< TImageType > | |
static constexpr unsigned int | ImageDimension = Superclass::ImageDimension |
Static Public Attributes inherited from itk::FiniteDifferenceFunction< TImageType > | |
static constexpr unsigned int | ImageDimension = ImageType::ImageDimension |
double | m_DerivativeSigma |
void | SetDerivativeSigma (const double v) |
double | GetDerivativeSigma () |
void | Initialize (const RadiusType &r) override |
GeodesicActiveContourShapePriorLevelSetFunction () | |
~GeodesicActiveContourShapePriorLevelSetFunction () override=default | |
void | PrintSelf (std::ostream &os, Indent indent) const override |
This function is used in GeodesicActiveContourShapePriorSegmentationLevelSetFilter to segment structures in an image based on user supplied edge potential map and shape model.
GeodesicActiveContourShapePriorLevelSetFunction is a subclass of the generic LevelSetFunction. It is used to segment structures in an image based on a user supplied edge potential map , which has values close to zero in regions near edges (or high image gradient) and values close to one in regions with relatively constant intensity. Typically, the edge potential map is a function of the gradient, for example:
where is image intensity and is the derivative of Gaussian operator.
The edge potential image is set via the SetFeatureImage() method.
In this function both the propagation term and the curvature spatial modifier term are taken directly from the edge potential image such that:
An advection term is constructed from the negative gradient of the edge potential image.
This term behaves like a doublet attracting the contour to the edges.
This class extends the basic LevelSetFunction with a shape prior term as developed in [1].
where is the signed distance function from a target shape and is a scalar constant.
The target shape signed distance function is supplied through a ShapeSignedDistanceFunction object. Typically, the shape is a function of a set of parameters.
Definition at line 93 of file itkGeodesicActiveContourShapePriorLevelSetFunction.h.
using itk::GeodesicActiveContourShapePriorLevelSetFunction< TImageType, TFeatureImageType >::ConstPointer = SmartPointer<const Self> |
Definition at line 103 of file itkGeodesicActiveContourShapePriorLevelSetFunction.h.
using itk::GeodesicActiveContourShapePriorLevelSetFunction< TImageType, TFeatureImageType >::FeatureImageType = TFeatureImageType |
Definition at line 104 of file itkGeodesicActiveContourShapePriorLevelSetFunction.h.
using itk::GeodesicActiveContourShapePriorLevelSetFunction< TImageType, TFeatureImageType >::FeatureScalarType = typename Superclass::FeatureScalarType |
Definition at line 116 of file itkGeodesicActiveContourShapePriorLevelSetFunction.h.
using itk::GeodesicActiveContourShapePriorLevelSetFunction< TImageType, TFeatureImageType >::FloatOffsetType = typename Superclass::FloatOffsetType |
Definition at line 118 of file itkGeodesicActiveContourShapePriorLevelSetFunction.h.
using itk::GeodesicActiveContourShapePriorLevelSetFunction< TImageType, TFeatureImageType >::GlobalDataStruct = typename Superclass::GlobalDataStruct |
Definition at line 120 of file itkGeodesicActiveContourShapePriorLevelSetFunction.h.
using itk::GeodesicActiveContourShapePriorLevelSetFunction< TImageType, TFeatureImageType >::ImageType = typename Superclass::ImageType |
Extract some parameters from the superclass.
Definition at line 113 of file itkGeodesicActiveContourShapePriorLevelSetFunction.h.
using itk::GeodesicActiveContourShapePriorLevelSetFunction< TImageType, TFeatureImageType >::NeighborhoodType = typename Superclass::NeighborhoodType |
Definition at line 114 of file itkGeodesicActiveContourShapePriorLevelSetFunction.h.
using itk::GeodesicActiveContourShapePriorLevelSetFunction< TImageType, TFeatureImageType >::Pointer = SmartPointer<Self> |
Definition at line 102 of file itkGeodesicActiveContourShapePriorLevelSetFunction.h.
using itk::GeodesicActiveContourShapePriorLevelSetFunction< TImageType, TFeatureImageType >::RadiusType = typename Superclass::RadiusType |
Definition at line 117 of file itkGeodesicActiveContourShapePriorLevelSetFunction.h.
using itk::GeodesicActiveContourShapePriorLevelSetFunction< TImageType, TFeatureImageType >::ScalarValueType = typename Superclass::ScalarValueType |
Definition at line 115 of file itkGeodesicActiveContourShapePriorLevelSetFunction.h.
using itk::GeodesicActiveContourShapePriorLevelSetFunction< TImageType, TFeatureImageType >::Self = GeodesicActiveContourShapePriorLevelSetFunction |
Standard class type aliases.
Definition at line 100 of file itkGeodesicActiveContourShapePriorLevelSetFunction.h.
using itk::GeodesicActiveContourShapePriorLevelSetFunction< TImageType, TFeatureImageType >::Superclass = ShapePriorSegmentationLevelSetFunction<TImageType, TFeatureImageType> |
Definition at line 101 of file itkGeodesicActiveContourShapePriorLevelSetFunction.h.
using itk::GeodesicActiveContourShapePriorLevelSetFunction< TImageType, TFeatureImageType >::VectorImageType = typename Superclass::VectorImageType |
Definition at line 119 of file itkGeodesicActiveContourShapePriorLevelSetFunction.h.
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inlineprotected |
Set/Get the sigma for the Gaussian kernel used to compute the gradient of the feature image needed for the advection term of the equation.
Definition at line 168 of file itkGeodesicActiveContourShapePriorLevelSetFunction.h.
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overrideprotecteddefault |
Set/Get the sigma for the Gaussian kernel used to compute the gradient of the feature image needed for the advection term of the equation.
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overridevirtual |
Compute the advection field from feature image.
Reimplemented from itk::SegmentationLevelSetFunction< TImageType, TFeatureImageType >.
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overridevirtual |
Compute speed image from feature image.
Reimplemented from itk::SegmentationLevelSetFunction< TImageType, TFeatureImageType >.
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virtual |
Create an object from an instance, potentially deferring to a factory. This method allows you to create an instance of an object that is exactly the same type as the referring object. This is useful in cases where an object has been cast back to a base class.
Reimplemented from itk::LightObject.
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inlineoverride |
The curvature speed is same as the propagation speed.
Definition at line 135 of file itkGeodesicActiveContourShapePriorLevelSetFunction.h.
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inline |
Set/Get the sigma for the Gaussian kernel used to compute the gradient of the feature image needed for the advection term of the equation.
Definition at line 150 of file itkGeodesicActiveContourShapePriorLevelSetFunction.h.
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virtual |
Run-time type information (and related methods).
Reimplemented from itk::ShapePriorSegmentationLevelSetFunction< TImageType, TFeatureImageType >.
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inlineoverridevirtual |
Set/Get the sigma for the Gaussian kernel used to compute the gradient of the feature image needed for the advection term of the equation.
Reimplemented from itk::LevelSetFunction< TImageType >.
Definition at line 157 of file itkGeodesicActiveContourShapePriorLevelSetFunction.h.
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static |
Method for creation through the object factory.
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overrideprotectedvirtual |
Set/Get the sigma for the Gaussian kernel used to compute the gradient of the feature image needed for the advection term of the equation.
Reimplemented from itk::FiniteDifferenceFunction< TImageType >.
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inline |
Set/Get the sigma for the Gaussian kernel used to compute the gradient of the feature image needed for the advection term of the equation.
Definition at line 145 of file itkGeodesicActiveContourShapePriorLevelSetFunction.h.
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staticconstexpr |
Extract some parameters from the superclass.
Definition at line 123 of file itkGeodesicActiveContourShapePriorLevelSetFunction.h.
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private |
Set/Get the sigma for the Gaussian kernel used to compute the gradient of the feature image needed for the advection term of the equation.
Definition at line 184 of file itkGeodesicActiveContourShapePriorLevelSetFunction.h.