ITK
5.2.0
Insight Toolkit
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#include <itkLabelMapContourOverlayImageFilter.h>
Public Types | |
enum | { PLAIN = 0, CONTOUR = 1, SLICE_CONTOUR = 2 } |
enum | { HIGH_LABEL_ON_TOP = 0, LOW_LABEL_ON_TOP = 1 } |
using | ConstPointer = SmartPointer< const Self > |
using | FeatureImageConstPointer = typename FeatureImageType::ConstPointer |
using | FeatureImagePixelType = typename FeatureImageType::PixelType |
using | FeatureImagePointer = typename FeatureImageType::Pointer |
using | FeatureImageRegionType = typename FeatureImageType::RegionType |
using | FeatureImageType = TFeatureImage |
using | FunctorType = typename Functor::LabelOverlayFunctor< FeatureImagePixelType, LabelMapPixelType, OutputImagePixelType > |
using | IndexType = typename OutputImageType::IndexType |
using | LabelMapConstPointer = typename LabelMapType::ConstPointer |
using | LabelMapPixelType = typename LabelMapType::PixelType |
using | LabelMapPointer = typename LabelMapType::Pointer |
using | LabelMapRegionType = typename LabelMapType::RegionType |
using | LabelMapType = TLabelMap |
using | LabelObjectType = typename LabelMapType::LabelObjectType |
using | LabelType = typename LabelObjectType::LabelType |
using | OutputImageConstPointer = typename OutputImageType::ConstPointer |
using | OutputImagePixelType = typename OutputImageType::PixelType |
using | OutputImagePointer = typename OutputImageType::Pointer |
using | OutputImageRegionType = typename OutputImageType::RegionType |
using | OutputImageType = TOutputImage |
using | Pointer = SmartPointer< Self > |
using | RegionType = typename OutputImageType::RegionType |
using | Self = LabelMapContourOverlayImageFilter |
using | SizeType = typename OutputImageType::SizeType |
using | Superclass = LabelMapFilter< TLabelMap, TOutputImage > |
Public Types inherited from itk::LabelMapFilter< TLabelMap, TOutputImage > | |
using | ConstPointer = SmartPointer< const Self > |
using | InputImageConstPointer = typename Superclass::InputImageConstPointer |
using | InputImagePixelType = typename Superclass::InputImagePixelType |
using | InputImagePointer = typename Superclass::InputImagePointer |
using | InputImageRegionType = typename Superclass::InputImageRegionType |
using | InputImageType = typename Superclass::InputImageType |
using | LabelObjectType = typename InputImageType::LabelObjectType |
using | OutputImageConstPointer = typename OutputImageType::ConstPointer |
using | OutputImagePixelType = typename OutputImageType::PixelType |
using | OutputImagePointer = typename OutputImageType::Pointer |
using | OutputImageRegionType = typename OutputImageType::RegionType |
using | OutputImageType = TOutputImage |
using | Pointer = SmartPointer< Self > |
using | Self = LabelMapFilter |
using | Superclass = ImageToImageFilter< TLabelMap, TOutputImage > |
Public Types inherited from itk::ImageToImageFilter< TLabelMap, TOutputImage > | |
using | ConstPointer = SmartPointer< const Self > |
using | InputImageConstPointer = typename InputImageType::ConstPointer |
using | InputImagePixelType = typename InputImageType::PixelType |
using | InputImagePointer = typename InputImageType::Pointer |
using | InputImageRegionType = typename InputImageType::RegionType |
using | InputImageType = TLabelMap |
using | OutputImagePixelType = typename Superclass::OutputImagePixelType |
using | OutputImageRegionType = typename Superclass::OutputImageRegionType |
using | Pointer = SmartPointer< Self > |
using | Self = ImageToImageFilter |
using | Superclass = ImageSource< TOutputImage > |
Public Types inherited from itk::ImageSource< TOutputImage > | |
using | ConstPointer = SmartPointer< const Self > |
using | DataObjectIdentifierType = Superclass::DataObjectIdentifierType |
using | DataObjectPointer = DataObject::Pointer |
using | DataObjectPointerArraySizeType = Superclass::DataObjectPointerArraySizeType |
using | OutputImagePixelType = typename OutputImageType::PixelType |
using | OutputImagePointer = typename OutputImageType::Pointer |
using | OutputImageRegionType = typename OutputImageType::RegionType |
using | OutputImageType = TOutputImage |
using | Pointer = SmartPointer< Self > |
using | Self = ImageSource |
using | Superclass = ProcessObject |
Public Types inherited from itk::ProcessObject | |
using | ConstPointer = SmartPointer< const Self > |
using | DataObjectIdentifierType = DataObject::DataObjectIdentifierType |
using | DataObjectPointer = DataObject::Pointer |
using | DataObjectPointerArray = std::vector< DataObjectPointer > |
using | DataObjectPointerArraySizeType = DataObjectPointerArray::size_type |
using | MultiThreaderType = MultiThreaderBase |
using | NameArray = std::vector< DataObjectIdentifierType > |
using | Pointer = SmartPointer< Self > |
using | Self = ProcessObject |
using | Superclass = Object |
Public Types inherited from itk::Object | |
using | ConstPointer = SmartPointer< const Self > |
using | Pointer = SmartPointer< Self > |
using | Self = Object |
using | Superclass = LightObject |
Public Types inherited from itk::LightObject | |
using | ConstPointer = SmartPointer< const Self > |
using | Pointer = SmartPointer< Self > |
using | Self = LightObject |
Static Public Member Functions | |
static Pointer | New () |
Static Public Member Functions inherited from itk::LabelMapFilter< TLabelMap, TOutputImage > | |
static Pointer | New () |
Static Public Member Functions inherited from itk::ImageToImageFilter< TLabelMap, TOutputImage > | |
static void | SetGlobalDefaultDirectionTolerance (double) |
static double | GetGlobalDefaultDirectionTolerance () |
static void | SetGlobalDefaultCoordinateTolerance (double) |
static double | GetGlobalDefaultCoordinateTolerance () |
Static Public Member Functions inherited from itk::Object | |
static bool | GetGlobalWarningDisplay () |
static void | GlobalWarningDisplayOff () |
static void | GlobalWarningDisplayOn () |
static Pointer | New () |
static void | SetGlobalWarningDisplay (bool val) |
Static Public Member Functions inherited from itk::LightObject | |
static void | BreakOnError () |
static Pointer | New () |
Static Public Attributes | |
static constexpr unsigned int | ImageDimension = TOutputImage::ImageDimension |
static constexpr unsigned int | LabelMapDimension = TLabelMap::ImageDimension |
static constexpr unsigned int | OutputImageDimension = TOutputImage::ImageDimension |
Static Public Attributes inherited from itk::LabelMapFilter< TLabelMap, TOutputImage > | |
static constexpr unsigned int | InputImageDimension |
static constexpr unsigned int | OutputImageDimension |
Static Public Attributes inherited from itk::ImageToImageFilter< TLabelMap, TOutputImage > | |
static constexpr unsigned int | InputImageDimension |
static constexpr unsigned int | OutputImageDimension |
Static Public Attributes inherited from itk::ImageSource< TOutputImage > | |
static constexpr unsigned int | OutputImageDimension = TOutputImage::ImageDimension |
double | m_Opacity |
int | m_Type |
int | m_Priority |
SizeType | m_ContourThickness |
SizeType | m_DilationRadius |
int | m_SliceDimension |
FunctorType | m_Functor |
LabelMapPointer | m_TempImage |
virtual void | SetOpacity (double _arg) |
virtual const double & | GetOpacity () const |
virtual void | SetType (int _arg) |
virtual const int & | GetType () const |
virtual void | SetPriority (int _arg) |
virtual const int & | GetPriority () const |
virtual void | SetDilationRadius (SizeType _arg) |
virtual const SizeType & | GetDilationRadius () const |
virtual void | SetContourThickness (SizeType _arg) |
virtual const SizeType & | GetContourThickness () const |
virtual void | SetSliceDimension (int _arg) |
virtual const int & | GetSliceDimension () const |
virtual void | SetFunctor (const FunctorType &functor) |
FunctorType & | GetFunctor () |
const FunctorType & | GetFunctor () const |
LabelMapContourOverlayImageFilter () | |
~LabelMapContourOverlayImageFilter () override=default | |
void | GenerateInputRequestedRegion () override |
void | EnlargeOutputRequestedRegion (DataObject *) override |
void | BeforeThreadedGenerateData () override |
void | DynamicThreadedGenerateData (const OutputImageRegionType &outputRegionForThread) override |
void | SuperclassDynamicTGD (const OutputImageRegionType &outputRegion) |
void | GenerateData () override |
void | ThreadedProcessLabelObject (LabelObjectType *labelObject) override |
void | GenerateOutputInformation () override |
void | PrintSelf (std::ostream &os, Indent indent) const override |
LabelMapType * | GetLabelMap () override |
Apply a colormap to the contours (outlines) of each object in a label map and superimpose it on top of the feature image.
The feature image is typically the image from which the labeling was produced. Use the SetInput function to set the LabelMap, and the SetFeatureImage function to set the feature image.
Apply a colormap to a label map and put it on top of the input image. The set of colors is a good selection of distinct colors. The opacity of the label map can be defined by the user. A background label produce a gray pixel with the same intensity than the input one.
This implementation was taken from the Insight Journal paper: https://www.insight-journal.org/browse/publication/176
Definition at line 60 of file itkLabelMapContourOverlayImageFilter.h.
using itk::LabelMapContourOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::ConstPointer = SmartPointer<const Self> |
Definition at line 69 of file itkLabelMapContourOverlayImageFilter.h.
using itk::LabelMapContourOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::FeatureImageConstPointer = typename FeatureImageType::ConstPointer |
Definition at line 82 of file itkLabelMapContourOverlayImageFilter.h.
using itk::LabelMapContourOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::FeatureImagePixelType = typename FeatureImageType::PixelType |
Definition at line 84 of file itkLabelMapContourOverlayImageFilter.h.
using itk::LabelMapContourOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::FeatureImagePointer = typename FeatureImageType::Pointer |
Definition at line 81 of file itkLabelMapContourOverlayImageFilter.h.
using itk::LabelMapContourOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::FeatureImageRegionType = typename FeatureImageType::RegionType |
Definition at line 83 of file itkLabelMapContourOverlayImageFilter.h.
using itk::LabelMapContourOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::FeatureImageType = TFeatureImage |
Definition at line 80 of file itkLabelMapContourOverlayImageFilter.h.
using itk::LabelMapContourOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::FunctorType = typename Functor::LabelOverlayFunctor<FeatureImagePixelType, LabelMapPixelType, OutputImagePixelType> |
Definition at line 96 of file itkLabelMapContourOverlayImageFilter.h.
using itk::LabelMapContourOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::IndexType = typename OutputImageType::IndexType |
Definition at line 91 of file itkLabelMapContourOverlayImageFilter.h.
using itk::LabelMapContourOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::LabelMapConstPointer = typename LabelMapType::ConstPointer |
Definition at line 74 of file itkLabelMapContourOverlayImageFilter.h.
using itk::LabelMapContourOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::LabelMapPixelType = typename LabelMapType::PixelType |
Definition at line 76 of file itkLabelMapContourOverlayImageFilter.h.
using itk::LabelMapContourOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::LabelMapPointer = typename LabelMapType::Pointer |
Definition at line 73 of file itkLabelMapContourOverlayImageFilter.h.
using itk::LabelMapContourOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::LabelMapRegionType = typename LabelMapType::RegionType |
Definition at line 75 of file itkLabelMapContourOverlayImageFilter.h.
using itk::LabelMapContourOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::LabelMapType = TLabelMap |
Some convenient type alias.
Definition at line 72 of file itkLabelMapContourOverlayImageFilter.h.
using itk::LabelMapContourOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::LabelObjectType = typename LabelMapType::LabelObjectType |
Definition at line 77 of file itkLabelMapContourOverlayImageFilter.h.
using itk::LabelMapContourOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::LabelType = typename LabelObjectType::LabelType |
Definition at line 78 of file itkLabelMapContourOverlayImageFilter.h.
using itk::LabelMapContourOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::OutputImageConstPointer = typename OutputImageType::ConstPointer |
Definition at line 88 of file itkLabelMapContourOverlayImageFilter.h.
using itk::LabelMapContourOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::OutputImagePixelType = typename OutputImageType::PixelType |
Definition at line 90 of file itkLabelMapContourOverlayImageFilter.h.
using itk::LabelMapContourOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::OutputImagePointer = typename OutputImageType::Pointer |
Definition at line 87 of file itkLabelMapContourOverlayImageFilter.h.
using itk::LabelMapContourOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::OutputImageRegionType = typename OutputImageType::RegionType |
Definition at line 89 of file itkLabelMapContourOverlayImageFilter.h.
using itk::LabelMapContourOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::OutputImageType = TOutputImage |
Definition at line 86 of file itkLabelMapContourOverlayImageFilter.h.
using itk::LabelMapContourOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::Pointer = SmartPointer<Self> |
Definition at line 68 of file itkLabelMapContourOverlayImageFilter.h.
using itk::LabelMapContourOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::RegionType = typename OutputImageType::RegionType |
Definition at line 93 of file itkLabelMapContourOverlayImageFilter.h.
using itk::LabelMapContourOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::Self = LabelMapContourOverlayImageFilter |
Standard class type aliases.
Definition at line 66 of file itkLabelMapContourOverlayImageFilter.h.
using itk::LabelMapContourOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::SizeType = typename OutputImageType::SizeType |
Definition at line 92 of file itkLabelMapContourOverlayImageFilter.h.
using itk::LabelMapContourOverlayImageFilter< TLabelMap, TFeatureImage, TOutputImage >::Superclass = LabelMapFilter<TLabelMap, TOutputImage> |
Definition at line 67 of file itkLabelMapContourOverlayImageFilter.h.
anonymous enum |
Enumerator | |
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PLAIN | |
CONTOUR | |
SLICE_CONTOUR |
Definition at line 103 of file itkLabelMapContourOverlayImageFilter.h.
anonymous enum |
Enumerator | |
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HIGH_LABEL_ON_TOP | |
LOW_LABEL_ON_TOP |
Definition at line 110 of file itkLabelMapContourOverlayImageFilter.h.
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protected |
Set/Get the opacity of the colored label image. The value must be between 0 and 1
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overrideprotecteddefault |
Set/Get the opacity of the colored label image. The value must be between 0 and 1
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overrideprotectedvirtual |
Set/Get the opacity of the colored label image. The value must be between 0 and 1
Reimplemented from itk::ImageSource< TOutputImage >.
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virtual |
Create an object from an instance, potentially deferring to a factory. This method allows you to create an instance of an object that is exactly the same type as the referring object. This is useful in cases where an object has been cast back to a base class.
Reimplemented from itk::Object.
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overrideprotectedvirtual |
Set/Get the opacity of the colored label image. The value must be between 0 and 1
Reimplemented from itk::ImageSource< TOutputImage >.
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overrideprotectedvirtual |
LabelMapContourOverlayImageFilter will produce the entire output.
Reimplemented from itk::ProcessObject.
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overrideprotectedvirtual |
Set/Get the opacity of the colored label image. The value must be between 0 and 1
Reimplemented from itk::ImageSource< TOutputImage >.
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overrideprotectedvirtual |
LabelMapContourOverlayImageFilter needs the entire input be available. Thus, it needs to provide an implementation of GenerateInputRequestedRegion().
Reimplemented from itk::ProcessObject.
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overrideprotectedvirtual |
Set/Get the opacity of the colored label image. The value must be between 0 and 1
Reimplemented from itk::ProcessObject.
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virtual |
Set/Get the opacity of the colored label image. The value must be between 0 and 1
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virtual |
Set/Get the opacity of the colored label image. The value must be between 0 and 1
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inline |
Get the feature image
Definition at line 132 of file itkLabelMapContourOverlayImageFilter.h.
References itk::ProcessObject::GetInput().
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inline |
Set/Get the opacity of the colored label image. The value must be between 0 and 1
Definition at line 201 of file itkLabelMapContourOverlayImageFilter.h.
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inline |
Set/Get the opacity of the colored label image. The value must be between 0 and 1
Definition at line 206 of file itkLabelMapContourOverlayImageFilter.h.
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inlineoverrideprotectedvirtual |
Set/Get the opacity of the colored label image. The value must be between 0 and 1
Reimplemented from itk::LabelMapFilter< TLabelMap, TOutputImage >.
Definition at line 252 of file itkLabelMapContourOverlayImageFilter.h.
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virtual |
Runtime information support.
Reimplemented from itk::LabelMapFilter< TLabelMap, TOutputImage >.
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virtual |
Set/Get the opacity of the colored label image. The value must be between 0 and 1
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virtual |
Set/Get the opacity of the colored label image. The value must be between 0 and 1
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virtual |
Set/Get the opacity of the colored label image. The value must be between 0 and 1
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virtual |
Set/Get the opacity of the colored label image. The value must be between 0 and 1
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static |
Standard New method.
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overrideprotectedvirtual |
Set/Get the opacity of the colored label image. The value must be between 0 and 1
Reimplemented from itk::ImageSource< TOutputImage >.
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virtual |
Set/Get the contour thickness - 1 by default.
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virtual |
Set/Get the object dilation radius - 0 by default.
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inline |
Set the feature image
Definition at line 124 of file itkLabelMapContourOverlayImageFilter.h.
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inlinevirtual |
Set/Get the overlay functor - defaults to a reasonable set of colors. This can be used to apply a different colormap.
Definition at line 192 of file itkLabelMapContourOverlayImageFilter.h.
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inline |
Set the input image
Definition at line 139 of file itkLabelMapContourOverlayImageFilter.h.
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inline |
Set the feature image
Definition at line 146 of file itkLabelMapContourOverlayImageFilter.h.
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virtual |
Set/Get the opacity of the colored label image. The value must be between 0 and 1
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virtual |
Set/Get the object priority - HIGH_LABEL_ON_TOP by default.
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virtual |
Set/Get the slice dimension - defaults to image dimension - 1.
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virtual |
Set/Get the overlay type - CONTOUR is used by default.
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inlineprotected |
Set/Get the opacity of the colored label image. The value must be between 0 and 1
Definition at line 234 of file itkLabelMapContourOverlayImageFilter.h.
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overrideprotected |
Set/Get the opacity of the colored label image. The value must be between 0 and 1
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staticconstexpr |
Definition at line 101 of file itkLabelMapContourOverlayImageFilter.h.
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staticconstexpr |
ImageDimension constants
Definition at line 99 of file itkLabelMapContourOverlayImageFilter.h.
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private |
Set/Get the opacity of the colored label image. The value must be between 0 and 1
Definition at line 261 of file itkLabelMapContourOverlayImageFilter.h.
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private |
Set/Get the opacity of the colored label image. The value must be between 0 and 1
Definition at line 262 of file itkLabelMapContourOverlayImageFilter.h.
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private |
Set/Get the opacity of the colored label image. The value must be between 0 and 1
Definition at line 264 of file itkLabelMapContourOverlayImageFilter.h.
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private |
Set/Get the opacity of the colored label image. The value must be between 0 and 1
Definition at line 258 of file itkLabelMapContourOverlayImageFilter.h.
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private |
Set/Get the opacity of the colored label image. The value must be between 0 and 1
Definition at line 260 of file itkLabelMapContourOverlayImageFilter.h.
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private |
Set/Get the opacity of the colored label image. The value must be between 0 and 1
Definition at line 263 of file itkLabelMapContourOverlayImageFilter.h.
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private |
Set/Get the opacity of the colored label image. The value must be between 0 and 1
Definition at line 266 of file itkLabelMapContourOverlayImageFilter.h.
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private |
Set/Get the opacity of the colored label image. The value must be between 0 and 1
Definition at line 259 of file itkLabelMapContourOverlayImageFilter.h.
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staticconstexpr |
Definition at line 100 of file itkLabelMapContourOverlayImageFilter.h.