#include <itkMeshFileReader.h>

Inheritance diagram for itk::MeshFileReader< TOutputMesh, ConvertPointPixelTraits, ConvertCellPixelTraits >:

Collaboration diagram for itk::MeshFileReader< TOutputMesh, ConvertPointPixelTraits, ConvertCellPixelTraits >:

Public Types
using	ConstPointer = SmartPointer< const Self >

using	OutputCellAutoPointer = typename OutputMeshType::CellAutoPointer

using	OutputCellIdentifier = typename OutputMeshType::CellIdentifier

using	OutputCellPixelType = typename OutputMeshType::CellPixelType

using	OutputCellType = typename OutputMeshType::CellType

using	OutputCoordRepType = typename OutputMeshType::CoordRepType

using	OutputHexahedronCellType = HexahedronCell< OutputCellType >

using	OutputLineCellType = LineCell< OutputCellType >

using	OutputMeshType = TOutputMesh

using	OutputPointIdentifier = typename OutputMeshType::PointIdentifier

using	OutputPointPixelType = typename OutputMeshType::PixelType

using	OutputPointType = typename OutputMeshType::PointType

using	OutputPolygonCellType = PolygonCell< OutputCellType >

using	OutputQuadraticEdgeCellType = QuadraticEdgeCell< OutputCellType >

using	OutputQuadraticTriangleCellType = QuadraticTriangleCell< OutputCellType >

using	OutputQuadrilateralCellType = QuadrilateralCell< OutputCellType >

using	OutputTetrahedronCellType = TetrahedronCell< OutputCellType >

using	OutputTriangleCellType = TriangleCell< OutputCellType >

using	OutputVertexCellType = VertexCell< OutputCellType >

using	Pointer = SmartPointer< Self >

using	Self = MeshFileReader

using	SizeValueType = typename MeshIOBase::SizeValueType

using	Superclass = MeshSource< TOutputMesh >

Public Types inherited from itk::MeshSource< TOutputMesh >
using	ConstPointer = SmartPointer< const Self >

using	DataObjectIdentifierType = Superclass::DataObjectIdentifierType

using	DataObjectPointer = DataObject::Pointer

using	OutputMeshPointer = typename OutputMeshType::Pointer

using	OutputMeshType = TOutputMesh

using	Pointer = SmartPointer< Self >

using	Self = MeshSource

using	Superclass = ProcessObject

using	DataObjectPointerArraySizeType = ProcessObject::DataObjectPointerArraySizeType

Public Types inherited from itk::ProcessObject
using	ConstPointer = SmartPointer< const Self >

using	DataObjectIdentifierType = DataObject::DataObjectIdentifierType

using	DataObjectPointer = DataObject::Pointer

using	DataObjectPointerArray = std::vector< DataObjectPointer >

using	DataObjectPointerArraySizeType = DataObjectPointerArray::size_type

using	MultiThreaderType = MultiThreaderBase

using	NameArray = std::vector< DataObjectIdentifierType >

using	Pointer = SmartPointer< Self >

using	Self = ProcessObject

using	Superclass = Object

Public Types inherited from itk::Object
using	ConstPointer = SmartPointer< const Self >

using	Pointer = SmartPointer< Self >

using	Self = Object

using	Superclass = LightObject

Public Types inherited from itk::LightObject
using	ConstPointer = SmartPointer< const Self >

using	Pointer = SmartPointer< Self >

using	Self = LightObject

Public Member Functions
virtual ::itk::LightObject::Pointer	CreateAnother () const

virtual const char *	GetNameOfClass () const

Public Member Functions inherited from itk::MeshSource< TOutputMesh >
OutputMeshType *	GetOutput ()

OutputMeshType *	GetOutput (unsigned int idx)

void	SetOutput (TOutputMesh *output)

virtual void	GraftOutput (DataObject *graft)

virtual void	GraftOutput (const DataObjectIdentifierType &key, DataObject *graft)

virtual void	GraftNthOutput (unsigned int idx, DataObject *graft)

DataObjectPointer	MakeOutput (DataObjectPointerArraySizeType idx) override

Public Member Functions inherited from itk::ProcessObject
virtual void	AbortGenerateDataOff ()

virtual void	AbortGenerateDataOn ()

virtual void	EnlargeOutputRequestedRegion (DataObject *)

virtual const bool &	GetAbortGenerateData () const

DataObjectPointerArray	GetIndexedInputs ()

DataObjectPointerArray	GetIndexedOutputs ()

NameArray	GetInputNames () const

DataObjectPointerArray	GetInputs ()

DataObjectPointerArraySizeType	GetNumberOfIndexedInputs () const

DataObjectPointerArraySizeType	GetNumberOfIndexedOutputs () const

DataObjectPointerArraySizeType	GetNumberOfInputs () const

DataObjectPointerArraySizeType	GetNumberOfOutputs () const

virtual DataObjectPointerArraySizeType	GetNumberOfValidRequiredInputs () const

NameArray	GetOutputNames () const

DataObjectPointerArray	GetOutputs ()

virtual float	GetProgress () const

NameArray	GetRequiredInputNames () const

bool	HasInput (const DataObjectIdentifierType &key) const

bool	HasOutput (const DataObjectIdentifierType &key) const

void	IncrementProgress (float increment)

virtual DataObjectPointer	MakeOutput (const DataObjectIdentifierType &)

virtual void	PropagateRequestedRegion (DataObject *output)

virtual void	ResetPipeline ()

virtual void	SetAbortGenerateData (bool _arg)

virtual void	Update ()

virtual void	UpdateLargestPossibleRegion ()

virtual void	UpdateOutputData (DataObject *output)

virtual void	UpdateOutputInformation ()

void	UpdateProgress (float progress)

virtual void	SetReleaseDataFlag (bool val)

virtual bool	GetReleaseDataFlag () const

void	ReleaseDataFlagOn ()

void	ReleaseDataFlagOff ()

virtual void	SetReleaseDataBeforeUpdateFlag (bool _arg)

virtual const bool &	GetReleaseDataBeforeUpdateFlag () const

virtual void	ReleaseDataBeforeUpdateFlagOn ()

virtual void	ReleaseDataBeforeUpdateFlagOff ()

virtual void	SetNumberOfWorkUnits (ThreadIdType _arg)

virtual const ThreadIdType &	GetNumberOfWorkUnits () const

MultiThreaderType *	GetMultiThreader () const

void	SetMultiThreader (MultiThreaderType *threader)

virtual void	PrepareOutputs ()

Public Member Functions inherited from itk::Object
unsigned long	AddObserver (const EventObject &event, Command *)

unsigned long	AddObserver (const EventObject &event, Command *) const

unsigned long	AddObserver (const EventObject &event, std::function< void(const EventObject &)> function) const

virtual void	DebugOff () const

virtual void	DebugOn () const

Command *	GetCommand (unsigned long tag)

bool	GetDebug () const

MetaDataDictionary &	GetMetaDataDictionary ()

const MetaDataDictionary &	GetMetaDataDictionary () const

virtual ModifiedTimeType	GetMTime () const

virtual const TimeStamp &	GetTimeStamp () const

bool	HasObserver (const EventObject &event) const

void	InvokeEvent (const EventObject &)

void	InvokeEvent (const EventObject &) const

virtual void	Modified () const

void	Register () const override

void	RemoveAllObservers ()

void	RemoveObserver (unsigned long tag)

void	SetDebug (bool debugFlag) const

void	SetReferenceCount (int) override

void	UnRegister () const noexcept override

void	SetMetaDataDictionary (const MetaDataDictionary &rhs)

void	SetMetaDataDictionary (MetaDataDictionary &&rrhs)

virtual void	SetObjectName (std::string _arg)

virtual const std::string &	GetObjectName () const

Public Member Functions inherited from itk::LightObject
Pointer	Clone () const

virtual void	Delete ()

virtual int	GetReferenceCount () const

void	Print (std::ostream &os, Indent indent=0) const

Static Public Member Functions
static Pointer	New ()

Static Public Member Functions inherited from itk::MeshSource< TOutputMesh >
static Pointer	New ()

Static Public Member Functions inherited from itk::Object
static bool	GetGlobalWarningDisplay ()

static void	GlobalWarningDisplayOff ()

static void	GlobalWarningDisplayOn ()

static Pointer	New ()

static void	SetGlobalWarningDisplay (bool val)

Static Public Member Functions inherited from itk::LightObject
static void	BreakOnError ()

static Pointer	New ()

Static Public Attributes
static constexpr unsigned int	OutputPointDimension = OutputMeshType::PointDimension

MeshIOBase::Pointer	m_MeshIO

bool	m_UserSpecifiedMeshIO

std::string	m_FileName

std::string	m_ExceptionMessage

virtual void	SetFileName (const char *_arg)

virtual const char *	GetFileName () const

void	SetMeshIO (MeshIOBase *meshIO)

virtual MeshIOBase *	GetModifiableMeshIO ()

virtual const MeshIOBase *	GetMeshIO () const

void	GenerateOutputInformation () override

template<typename T >
void	ReadPoints (T *buffer)

template<typename T >
void	ReadCells (T *buffer)

void	ReadPointData ()

void	ReadCellData ()

	MeshFileReader ()

	~MeshFileReader () override=default

void	PrintSelf (std::ostream &os, Indent indent) const override

template<typename T >
void	ConvertPointPixelBuffer (void inputData, T outputData, vcl_size_t numberOfPixels)

template<typename T >
void	ConvertCellPixelBuffer (void inputData, T outputData, vcl_size_t numberOfPixels)

void	TestFileExistanceAndReadability ()

void	GenerateData () override

Additional Inherited Members
Protected Member Functions inherited from itk::MeshSource< TOutputMesh >
	MeshSource ()

	~MeshSource () override=default

void	GenerateInputRequestedRegion () override

Protected Member Functions inherited from itk::ProcessObject
	ProcessObject ()

	~ProcessObject () override

DataObject *	GetInput (const DataObjectIdentifierType &key)

const DataObject *	GetInput (const DataObjectIdentifierType &key) const

DataObject *	GetInput (DataObjectPointerArraySizeType idx)

const DataObject *	GetInput (DataObjectPointerArraySizeType idx) const

virtual void	SetInput (const DataObjectIdentifierType &key, DataObject *input)

virtual void	SetNthInput (DataObjectPointerArraySizeType idx, DataObject *input)

virtual void	AddInput (DataObject *input)

virtual void	PushBackInput (const DataObject *input)

virtual void	PopBackInput ()

virtual void	PushFrontInput (const DataObject *input)

virtual void	PopFrontInput ()

virtual void	RemoveInput (const DataObjectIdentifierType &key)

virtual void	RemoveInput (DataObjectPointerArraySizeType)

DataObject *	GetPrimaryInput ()

const DataObject *	GetPrimaryInput () const

virtual void	SetPrimaryInputName (const DataObjectIdentifierType &key)

virtual const char *	GetPrimaryInputName () const

virtual void	SetPrimaryInput (DataObject *object)

void	SetNumberOfIndexedInputs (DataObjectPointerArraySizeType num)

virtual void	SetNumberOfRequiredInputs (DataObjectPointerArraySizeType)

virtual const DataObjectPointerArraySizeType &	GetNumberOfRequiredInputs () const

bool	RemoveRequiredInputName (const DataObjectIdentifierType &)

bool	IsRequiredInputName (const DataObjectIdentifierType &) const

void	SetRequiredInputNames (const NameArray &)

bool	AddRequiredInputName (const DataObjectIdentifierType &)

bool	AddRequiredInputName (const DataObjectIdentifierType &, DataObjectPointerArraySizeType idx)

void	AddOptionalInputName (const DataObjectIdentifierType &)

void	AddOptionalInputName (const DataObjectIdentifierType &, DataObjectPointerArraySizeType idx)

DataObject *	GetOutput (const DataObjectIdentifierType &key)

const DataObject *	GetOutput (const DataObjectIdentifierType &key) const

virtual void	SetPrimaryOutputName (const DataObjectIdentifierType &key)

virtual const char *	GetPrimaryOutputName () const

DataObject *	GetOutput (DataObjectPointerArraySizeType i)

const DataObject *	GetOutput (DataObjectPointerArraySizeType i) const

virtual void	SetOutput (const DataObjectIdentifierType &name, DataObject *output)

virtual void	RemoveOutput (const DataObjectIdentifierType &key)

DataObject *	GetPrimaryOutput ()

const DataObject *	GetPrimaryOutput () const

virtual void	SetPrimaryOutput (DataObject *object)

virtual void	SetNthOutput (DataObjectPointerArraySizeType idx, DataObject *output)

virtual void	AddOutput (DataObject *output)

virtual void	RemoveOutput (DataObjectPointerArraySizeType idx)

virtual void	SetNumberOfRequiredOutputs (DataObjectPointerArraySizeType _arg)

virtual const DataObjectPointerArraySizeType &	GetNumberOfRequiredOutputs () const

void	SetNumberOfIndexedOutputs (DataObjectPointerArraySizeType num)

DataObjectIdentifierType	MakeNameFromInputIndex (DataObjectPointerArraySizeType idx) const

DataObjectIdentifierType	MakeNameFromOutputIndex (DataObjectPointerArraySizeType idx) const

DataObjectPointerArraySizeType	MakeIndexFromInputName (const DataObjectIdentifierType &name) const

DataObjectPointerArraySizeType	MakeIndexFromOutputName (const DataObjectIdentifierType &name) const

bool	IsIndexedInputName (const DataObjectIdentifierType &) const

bool	IsIndexedOutputName (const DataObjectIdentifierType &) const

virtual void	VerifyPreconditions () ITKv5_CONST

virtual void	VerifyInputInformation () ITKv5_CONST

virtual void	GenerateOutputRequestedRegion (DataObject *output)

virtual void	PropagateResetPipeline ()

virtual void	ReleaseInputs ()

virtual void	CacheInputReleaseDataFlags ()

virtual void	RestoreInputReleaseDataFlags ()

virtual bool	GetThreaderUpdateProgress () const

virtual void	ThreaderUpdateProgressOn ()

virtual void	ThreaderUpdateProgressOff ()

virtual void	SetThreaderUpdateProgress (bool arg)

Protected Member Functions inherited from itk::Object
	Object ()

	~Object () override

bool	PrintObservers (std::ostream &os, Indent indent) const

virtual void	SetTimeStamp (const TimeStamp &timeStamp)

Protected Member Functions inherited from itk::LightObject
virtual LightObject::Pointer	InternalClone () const

	LightObject ()

virtual void	PrintHeader (std::ostream &os, Indent indent) const

virtual void	PrintTrailer (std::ostream &os, Indent indent) const

virtual	~LightObject ()

Static Protected Member Functions inherited from itk::ProcessObject
static constexpr float	progressFixedToFloat (uint32_t fixed)

static uint32_t	progressFloatToFixed (float f)

Protected Attributes inherited from itk::ProcessObject
bool	m_Updating

TimeStamp	m_OutputInformationMTime

Protected Attributes inherited from itk::LightObject
std::atomic< int >	m_ReferenceCount

Detailed Description

template<typename TOutputMesh, typename ConvertPointPixelTraits = MeshConvertPixelTraits<typename TOutputMesh::PixelType>, class ConvertCellPixelTraits = MeshConvertPixelTraits<typename TOutputMesh::CellPixelType>>
class itk::MeshFileReader< TOutputMesh, ConvertPointPixelTraits, ConvertCellPixelTraits >

Mesh source that reads mesh data from a single file.

This source object is a general filter to read data from a variety of file formats. It works with a MeshIOBase subclass to actually do the reading of the data. Object factory machinery can be used to automatically create the MeshIOBase, or the MeshIOBase can be manually created and set.

TOutputMesh is the type expected by the external users of the filter. If data stored in the file is stored in a different format then specified by TOutputMesh, than this filter converts data between the file type and the external expected type. The ConvertTraits template argument is used to do the conversion.

A Pluggable factory pattern is used this allows different kinds of readers to be registered (even at run time) without having to modify the code in this class. Normally just setting the FileName with the appropriate suffix is enough to get the reader to instantiate the correct MeshIO and read the file properly. However, some files have no accepted suffix, so you will have to manually create the MeshIO instance of the write type.

See also: MeshIOBase

Author: Wanlin Zhu. Uviversity of New South Wales, Australia.

ITK Sphinx Examples:

All ITK Sphinx Examples

Read Mesh

Examples: SphinxExamples/src/Core/Mesh/ConvertTriangleMeshToBinaryImage/Code.cxx, SphinxExamples/src/Core/Mesh/TranslateOneMesh/Code.cxx, SphinxExamples/src/Core/QuadEdgeMesh/CutMesh/Code.cxx, SphinxExamples/src/Core/QuadEdgeMesh/GetListOfFacesAroundAGivenVertex/Code.cxx, SphinxExamples/src/Core/QuadEdgeMesh/PrintVertexNeighbors/Code.cxx, SphinxExamples/src/Filtering/FastMarching/ComputeGeodesicDistanceOnMesh/Code.cxx, SphinxExamples/src/Filtering/QuadEdgeMeshFiltering/CleanQuadEdgeMesh/Code.cxx, SphinxExamples/src/Filtering/QuadEdgeMeshFiltering/ComputeNormalsOfAMesh/Code.cxx, SphinxExamples/src/Filtering/QuadEdgeMeshFiltering/ComputePlanarParameterizationOfAMesh/Code.cxx, SphinxExamples/src/Filtering/QuadEdgeMeshFiltering/DelaunayConformEdgeFlipping/Code.cxx, and SphinxExamples/src/IO/Mesh/ReadMesh/Code.cxx.

Definition at line 80 of file itkMeshFileReader.h.