ITK  5.2.0
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itk::MultiphaseDenseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TIdCell > Class Template Reference
Data Processing Objects » Filters » Image FiltersGroup Nonunit » | Module ITKReview

#include <itkMultiphaseDenseFiniteDifferenceImageFilter.h>

+ Inheritance diagram for itk::MultiphaseDenseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TIdCell >:
+ Collaboration diagram for itk::MultiphaseDenseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TIdCell >:

Public Types

using ConstPointer = SmartPointer< const Self >
 
using FaceCalculatorType = NeighborhoodAlgorithm::ImageBoundaryFacesCalculator< InputImageType >
 
using FaceListType = typename FaceCalculatorType::FaceListType
 
using FeatureImagePointer = typename Superclass::FeatureImagePointer
 
using FeatureImageType = typename Superclass::FeatureImageType
 
using FeaturePixelType = typename Superclass::FeaturePixelType
 
using FeaturePointType = typename Superclass::FeaturePointType
 
using FeatureRegionType = typename Superclass::FeatureRegionType
 
using FeatureSizeType = typename Superclass::FeatureSizeType
 
using FeatureSpacingType = typename Superclass::FeatureSpacingType
 
using FiniteDifferenceFunctionPointer = typename Superclass::FiniteDifferenceFunctionPointer
 
using FiniteDifferenceFunctionType = typename Superclass::FiniteDifferenceFunctionType
 
using IdCellType = typename Superclass::IdCellType
 
using InputImagePointer = typename Superclass::InputImagePointer
 
using InputImageType = typename Superclass::InputImageType
 
using InputIndexType = typename Superclass::InputIndexType
 
using InputIndexValueType = typename Superclass::InputIndexValueType
 
using InputPixelType = typename Superclass::InputPixelType
 
using InputPointType = typename Superclass::InputPointType
 
using InputRegionType = typename Superclass::InputRegionType
 
using InputSizeType = typename Superclass::InputSizeType
 
using InputSizeValueType = typename Superclass::InputSizeValueType
 
using InputSpacingType = typename Superclass::InputSpacingType
 
using MaurerPointer = typename MaurerType::Pointer
 
using MaurerType = SignedMaurerDistanceMapImageFilter< InputImageType, InputImageType >
 
using NeighborhoodIteratorType = typename FiniteDifferenceFunctionType::NeighborhoodType
 
using OutputImagePointer = typename Superclass::OutputImagePointer
 
using OutputImageType = typename Superclass::OutputImageType
 
using OutputIndexType = typename Superclass::OutputIndexType
 
using OutputIndexValueType = typename Superclass::OutputIndexValueType
 
using OutputPixelType = typename OutputImageType::PixelType
 
using OutputRegionType = typename Superclass::OutputRegionType
 
using OutputSizeType = typename Superclass::OutputSizeType
 
using Pointer = SmartPointer< Self >
 
using Self = MultiphaseDenseFiniteDifferenceImageFilter
 
using SizeValueType = typename Superclass::OutputSizeValueType
 
using Superclass = MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TIdCell >
 
using ThresholdFilterPointer = typename ThresholdFilterType::Pointer
 
using ThresholdFilterType = BinaryThresholdImageFilter< InputImageType, InputImageType >
 
using TimeStepType = typename Superclass::TimeStepType
 
using ValueType = typename InputImageType::ValueType
 
- Public Types inherited from itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TIdCell >
using CentroidVectorType = Vector< float, Self::ImageDimension >
 
using ConstPointer = SmartPointer< const Self >
 
using FeatureImagePointer = typename FeatureImageType::Pointer
 
using FeatureImageType = TFeatureImage
 
using FeaturePixelType = typename FeatureImageType::PixelType
 
using FeaturePointType = typename FeatureImageType::PointType
 
using FeatureRegionType = typename FeatureImageType::RegionType
 
using FeatureSizeType = typename FeatureImageType::SizeType
 
using FeatureSpacingType = typename FeatureImageType::SpacingType
 
using FiniteDifferenceFunctionPointer = typename FiniteDifferenceFunctionType::Pointer
 
using FiniteDifferenceFunctionType = TFunction
 
using IdCellType = TIdCell
 
using InputCoordRepType = typename InputPointType::CoordRepType
 
using InputImagePointer = typename InputImageType::Pointer
 
using InputImageType = TInputImage
 
using InputIndexType = typename InputImageType::IndexType
 
using InputIndexValueType = typename InputIndexType::IndexValueType
 
using InputOffsetValueType = typename InputImageType::OffsetValueType
 
using InputPixelType = typename InputImageType::PixelType
 
using InputPointType = typename InputImageType::PointType
 
using InputRegionType = typename InputImageType::RegionType
 
using InputSizeType = typename InputImageType::SizeType
 
using InputSizeValueType = typename InputSizeType::SizeValueType
 
using InputSpacingType = typename InputImageType::SpacingType
 
using KdTreeGeneratorPointer = typename KdTreeGeneratorType::Pointer
 
using KdTreeGeneratorType = Statistics::KdTreeGenerator< SampleType >
 
using KdTreePointer = typename KdTreeType::Pointer
 
using KdTreeType = typename KdTreeGeneratorType::KdTreeType
 
using OutputImagePointer = typename OutputImageType::Pointer
 
using OutputImageType = TOutputImage
 
using OutputIndexType = typename OutputImageType::IndexType
 
using OutputIndexValueType = typename OutputImageType::IndexValueType
 
using OutputPixelType = typename OutputImageType::PixelType
 
using OutputRegionType = typename OutputImageType::RegionType
 
using OutputSizeType = typename OutputImageType::SizeType
 
using OutputSizeValueType = typename OutputImageType::SizeValueType
 
using Pointer = SmartPointer< Self >
 
using RadiusType = typename FiniteDifferenceFunctionType::RadiusType
 
using SampleType = Statistics::ListSample< CentroidVectorType >
 
using Self = MultiphaseFiniteDifferenceImageFilter
 
using Superclass = InPlaceImageFilter< TFeatureImage, TOutputImage >
 
using TimeStepType = typename FiniteDifferenceFunctionType::TimeStepType
 
using TimeStepVectorType = typename std::vector< TimeStepType >
 
using VectorIdCellType = std::vector< IdCellType >
 
- Public Types inherited from itk::InPlaceImageFilter< TFeatureImage, TOutputImage >
using ConstPointer = SmartPointer< const Self >
 
using InputImageConstPointer = typename InputImageType::ConstPointer
 
using InputImagePixelType = typename InputImageType::PixelType
 
using InputImagePointer = typename InputImageType::Pointer
 
using InputImageRegionType = typename InputImageType::RegionType
 
using InputImageType = TFeatureImage
 
using OutputImagePixelType = typename Superclass::OutputImagePixelType
 
using OutputImagePointer = typename Superclass::OutputImagePointer
 
using OutputImageRegionType = typename Superclass::OutputImageRegionType
 
using OutputImageType = typename Superclass::OutputImageType
 
using Pointer = SmartPointer< Self >
 
using Self = InPlaceImageFilter
 
using Superclass = ImageToImageFilter< TFeatureImage, TOutputImage >
 
- Public Types inherited from itk::ImageToImageFilter< TFeatureImage, TOutputImage >
using ConstPointer = SmartPointer< const Self >
 
using InputImageConstPointer = typename InputImageType::ConstPointer
 
using InputImagePixelType = typename InputImageType::PixelType
 
using InputImagePointer = typename InputImageType::Pointer
 
using InputImageRegionType = typename InputImageType::RegionType
 
using InputImageType = TFeatureImage
 
using OutputImagePixelType = typename Superclass::OutputImagePixelType
 
using OutputImageRegionType = typename Superclass::OutputImageRegionType
 
using Pointer = SmartPointer< Self >
 
using Self = ImageToImageFilter
 
using Superclass = ImageSource< TOutputImage >
 
- Public Types inherited from itk::ImageSource< TOutputImage >
using ConstPointer = SmartPointer< const Self >
 
using DataObjectIdentifierType = Superclass::DataObjectIdentifierType
 
using DataObjectPointer = DataObject::Pointer
 
using DataObjectPointerArraySizeType = Superclass::DataObjectPointerArraySizeType
 
using OutputImagePixelType = typename OutputImageType::PixelType
 
using OutputImagePointer = typename OutputImageType::Pointer
 
using OutputImageRegionType = typename OutputImageType::RegionType
 
using OutputImageType = TOutputImage
 
using Pointer = SmartPointer< Self >
 
using Self = ImageSource
 
using Superclass = ProcessObject
 
- Public Types inherited from itk::ProcessObject
using ConstPointer = SmartPointer< const Self >
 
using DataObjectIdentifierType = DataObject::DataObjectIdentifierType
 
using DataObjectPointer = DataObject::Pointer
 
using DataObjectPointerArray = std::vector< DataObjectPointer >
 
using DataObjectPointerArraySizeType = DataObjectPointerArray::size_type
 
using MultiThreaderType = MultiThreaderBase
 
using NameArray = std::vector< DataObjectIdentifierType >
 
using Pointer = SmartPointer< Self >
 
using Self = ProcessObject
 
using Superclass = Object
 
- Public Types inherited from itk::Object
using ConstPointer = SmartPointer< const Self >
 
using Pointer = SmartPointer< Self >
 
using Self = Object
 
using Superclass = LightObject
 
- Public Types inherited from itk::LightObject
using ConstPointer = SmartPointer< const Self >
 
using Pointer = SmartPointer< Self >
 
using Self = LightObject
 

Public Member Functions

virtual const char * GetNameOfClass () const
 
virtual unsigned int GetReinitializeCounter ()
 
void SetFunctionCount (const IdCellType &n)
 
virtual void SetReinitializeCounter (unsigned int _arg)
 
- Public Member Functions inherited from itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TIdCell >
virtual const FiniteDifferenceFunctionPointer GetDifferenceFunction (const IdCellType &functionIndex) const
 
virtual void SetDifferenceFunction (const IdCellType &functionIndex, FiniteDifferenceFunctionPointer function)
 
virtual void SetNumberOfIterations (unsigned int _arg)
 
virtual const unsigned int & GetNumberOfIterations () const
 
virtual void SetUseImageSpacing (bool _arg)
 
virtual void UseImageSpacingOn ()
 
virtual void UseImageSpacingOff ()
 
virtual const bool & GetUseImageSpacing () const
 
virtual void SetMaximumRMSError (double _arg)
 
virtual const double & GetMaximumRMSError () const
 
virtual void SetRMSChange (double _arg)
 
virtual const double & GetRMSChange () const
 
virtual void SetInitializedState (bool _arg)
 
virtual const bool & GetInitializedState () const
 
virtual void InitializedStateOn ()
 
virtual void InitializedStateOff ()
 
virtual void SetManualReinitialization (bool _arg)
 
virtual const bool & GetManualReinitialization () const
 
virtual void ManualReinitializationOn ()
 
virtual void ManualReinitializationOff ()
 
virtual void SetElapsedIterations (unsigned int _arg)
 
virtual const unsigned int & GetElapsedIterations () const
 
void SetLevelSet (const IdCellType &i, const InputImageType *levelSet)
 
InputImagePointer GetLevelSet (const IdCellType &i)
 
void SetLookup (VectorIdCellType lookup)
 
void SetKdTree (KdTreeType *kdtree)
 
void SetFunctionCount (const IdCellType &n)
 
- Public Member Functions inherited from itk::InPlaceImageFilter< TFeatureImage, TOutputImage >
virtual void SetInPlace (bool _arg)
 
virtual bool GetInPlace () const
 
virtual void InPlaceOn ()
 
virtual void InPlaceOff ()
 
virtual bool CanRunInPlace () const
 
- Public Member Functions inherited from itk::ImageToImageFilter< TFeatureImage, TOutputImage >
const InputImageType * GetInput () const
 
const InputImageType * GetInput (unsigned int idx) const
 
void PopBackInput () override
 
void PopFrontInput () override
 
virtual void PushBackInput (const InputImageType *input)
 
virtual void PushFrontInput (const InputImageType *input)
 
virtual void SetInput (const DataObjectIdentifierType &key, DataObject *input)
 
virtual void SetInput (const InputImageType *input)
 
virtual void SetInput (unsigned int, const TFeatureImage *image)
 
virtual void SetCoordinateTolerance (double _arg)
 
virtual double GetCoordinateTolerance () const
 
virtual void SetDirectionTolerance (double _arg)
 
virtual double GetDirectionTolerance () const
 
- Public Member Functions inherited from itk::ImageSource< TOutputImage >
OutputImageType * GetOutput ()
 
const OutputImageType * GetOutput () const
 
OutputImageType * GetOutput (unsigned int idx)
 
virtual void GraftOutput (DataObject *graft)
 
virtual void GraftOutput (const DataObjectIdentifierType &key, DataObject *graft)
 
virtual void GraftNthOutput (unsigned int idx, DataObject *graft)
 
ProcessObject::DataObjectPointer MakeOutput (ProcessObject::DataObjectPointerArraySizeType idx) override
 
ProcessObject::DataObjectPointer MakeOutput (const ProcessObject::DataObjectIdentifierType &) override
 
- Public Member Functions inherited from itk::ProcessObject
virtual void AbortGenerateDataOff ()
 
virtual void AbortGenerateDataOn ()
 
virtual void EnlargeOutputRequestedRegion (DataObject *)
 
virtual const bool & GetAbortGenerateData () const
 
DataObjectPointerArray GetIndexedInputs ()
 
DataObjectPointerArray GetIndexedOutputs ()
 
NameArray GetInputNames () const
 
DataObjectPointerArray GetInputs ()
 
DataObjectPointerArraySizeType GetNumberOfIndexedInputs () const
 
DataObjectPointerArraySizeType GetNumberOfIndexedOutputs () const
 
DataObjectPointerArraySizeType GetNumberOfInputs () const
 
DataObjectPointerArraySizeType GetNumberOfOutputs () const
 
virtual DataObjectPointerArraySizeType GetNumberOfValidRequiredInputs () const
 
NameArray GetOutputNames () const
 
DataObjectPointerArray GetOutputs ()
 
virtual float GetProgress () const
 
NameArray GetRequiredInputNames () const
 
bool HasInput (const DataObjectIdentifierType &key) const
 
bool HasOutput (const DataObjectIdentifierType &key) const
 
void IncrementProgress (float increment)
 
virtual void PropagateRequestedRegion (DataObject *output)
 
virtual void ResetPipeline ()
 
virtual void SetAbortGenerateData (bool _arg)
 
virtual void Update ()
 
virtual void UpdateLargestPossibleRegion ()
 
virtual void UpdateOutputData (DataObject *output)
 
virtual void UpdateOutputInformation ()
 
void UpdateProgress (float progress)
 
virtual void SetReleaseDataFlag (bool val)
 
virtual bool GetReleaseDataFlag () const
 
void ReleaseDataFlagOn ()
 
void ReleaseDataFlagOff ()
 
virtual void SetReleaseDataBeforeUpdateFlag (bool _arg)
 
virtual const bool & GetReleaseDataBeforeUpdateFlag () const
 
virtual void ReleaseDataBeforeUpdateFlagOn ()
 
virtual void ReleaseDataBeforeUpdateFlagOff ()
 
virtual void SetNumberOfWorkUnits (ThreadIdType _arg)
 
virtual const ThreadIdType & GetNumberOfWorkUnits () const
 
MultiThreaderType * GetMultiThreader () const
 
void SetMultiThreader (MultiThreaderType *threader)
 
virtual void PrepareOutputs ()
 
- Public Member Functions inherited from itk::Object
unsigned long AddObserver (const EventObject &event, Command *)
 
unsigned long AddObserver (const EventObject &event, Command *) const
 
unsigned long AddObserver (const EventObject &event, std::function< void(const EventObject &)> function) const
 
LightObject::Pointer CreateAnother () const override
 
virtual void DebugOff () const
 
virtual void DebugOn () const
 
Command * GetCommand (unsigned long tag)
 
bool GetDebug () const
 
MetaDataDictionary & GetMetaDataDictionary ()
 
const MetaDataDictionary & GetMetaDataDictionary () const
 
virtual ModifiedTimeType GetMTime () const
 
virtual const TimeStamp & GetTimeStamp () const
 
bool HasObserver (const EventObject &event) const
 
void InvokeEvent (const EventObject &)
 
void InvokeEvent (const EventObject &) const
 
virtual void Modified () const
 
void Register () const override
 
void RemoveAllObservers ()
 
void RemoveObserver (unsigned long tag)
 
void SetDebug (bool debugFlag) const
 
void SetReferenceCount (int) override
 
void UnRegister () const noexcept override
 
void SetMetaDataDictionary (const MetaDataDictionary &rhs)
 
void SetMetaDataDictionary (MetaDataDictionary &&rrhs)
 
virtual void SetObjectName (std::string _arg)
 
virtual const std::string & GetObjectName () const
 
- Public Member Functions inherited from itk::LightObject
Pointer Clone () const
 
virtual void Delete ()
 
virtual int GetReferenceCount () const
 
void Print (std::ostream &os, Indent indent=0) const
 

Static Public Attributes

static constexpr unsigned int ImageDimension = Superclass::ImageDimension
 
- Static Public Attributes inherited from itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TIdCell >
static constexpr unsigned int ImageDimension
 
- Static Public Attributes inherited from itk::InPlaceImageFilter< TFeatureImage, TOutputImage >
static constexpr unsigned int InputImageDimension
 
static constexpr unsigned int OutputImageDimension
 
- Static Public Attributes inherited from itk::ImageToImageFilter< TFeatureImage, TOutputImage >
static constexpr unsigned int InputImageDimension
 
static constexpr unsigned int OutputImageDimension
 
- Static Public Attributes inherited from itk::ImageSource< TOutputImage >
static constexpr unsigned int OutputImageDimension = TOutputImage::ImageDimension
 

Protected Member Functions

void ApplyUpdate (TimeStepType dt) override
 
void CopyInputToOutput () override
 
 MultiphaseDenseFiniteDifferenceImageFilter ()
 
void PostProcessOutput () override
 
void PrintSelf (std::ostream &, Indent indent) const override
 
 ~MultiphaseDenseFiniteDifferenceImageFilter () override=default
 
- Protected Member Functions inherited from itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TIdCell >
 MultiphaseFiniteDifferenceImageFilter ()
 
 ~MultiphaseFiniteDifferenceImageFilter () override=default
 
void PrintSelf (std::ostream &os, Indent indent) const override
 
virtual void ApplyUpdate (TimeStepType dt)=0
 
void GenerateData () override
 
void GenerateInputRequestedRegion () override
 
virtual bool Halt ()
 
virtual bool ThreadedHalt (void *)
 
virtual void Initialize ()
 
virtual void InitializeIteration ()
 
TimeStepType ResolveTimeStep (const TimeStepVectorType &timeStepList, const std::vector< bool > &valid)
 
- Protected Member Functions inherited from itk::InPlaceImageFilter< TFeatureImage, TOutputImage >
 InPlaceImageFilter ()=default
 
 ~InPlaceImageFilter () override=default
 
void AllocateOutputs () override
 
void ReleaseInputs () override
 
virtual bool GetRunningInPlace () const
 
- Protected Member Functions inherited from itk::ImageToImageFilter< TFeatureImage, TOutputImage >
void PushBackInput (const DataObject *input) override
 
void PushFrontInput (const DataObject *input) override
 
 ImageToImageFilter ()
 
 ~ImageToImageFilter () override=default
 
void VerifyInputInformation () ITKv5_CONST override
 
virtual void CallCopyOutputRegionToInputRegion (InputImageRegionType &destRegion, const OutputImageRegionType &srcRegion)
 
virtual void CallCopyInputRegionToOutputRegion (OutputImageRegionType &destRegion, const InputImageRegionType &srcRegion)
 
- Protected Member Functions inherited from itk::ImageSource< TOutputImage >
 ImageSource ()
 
 ~ImageSource () override=default
 
void ClassicMultiThread (ThreadFunctionType callbackFunction)
 
virtual void ThreadedGenerateData (const OutputImageRegionType &region, ThreadIdType threadId)
 
virtual void DynamicThreadedGenerateData (const OutputImageRegionType &outputRegionForThread)
 
virtual void BeforeThreadedGenerateData ()
 
virtual void AfterThreadedGenerateData ()
 
virtual const ImageRegionSplitterBase * GetImageRegionSplitter () const
 
virtual unsigned int SplitRequestedRegion (unsigned int i, unsigned int pieces, OutputImageRegionType &splitRegion)
 
virtual bool GetDynamicMultiThreading () const
 
virtual void SetDynamicMultiThreading (bool _arg)
 
virtual void DynamicMultiThreadingOn ()
 
virtual void DynamicMultiThreadingOff ()
 
- Protected Member Functions inherited from itk::ProcessObject
 ProcessObject ()
 
 ~ProcessObject () override
 
DataObject * GetInput (const DataObjectIdentifierType &key)
 
const DataObject * GetInput (const DataObjectIdentifierType &key) const
 
DataObject * GetInput (DataObjectPointerArraySizeType idx)
 
const DataObject * GetInput (DataObjectPointerArraySizeType idx) const
 
virtual void SetInput (const DataObjectIdentifierType &key, DataObject *input)
 
virtual void SetNthInput (DataObjectPointerArraySizeType idx, DataObject *input)
 
virtual void AddInput (DataObject *input)
 
virtual void RemoveInput (const DataObjectIdentifierType &key)
 
virtual void RemoveInput (DataObjectPointerArraySizeType)
 
DataObject * GetPrimaryInput ()
 
const DataObject * GetPrimaryInput () const
 
virtual void SetPrimaryInputName (const DataObjectIdentifierType &key)
 
virtual const char * GetPrimaryInputName () const
 
virtual void SetPrimaryInput (DataObject *object)
 
void SetNumberOfIndexedInputs (DataObjectPointerArraySizeType num)
 
virtual void SetNumberOfRequiredInputs (DataObjectPointerArraySizeType)
 
virtual const DataObjectPointerArraySizeType & GetNumberOfRequiredInputs () const
 
bool RemoveRequiredInputName (const DataObjectIdentifierType &)
 
bool IsRequiredInputName (const DataObjectIdentifierType &) const
 
void SetRequiredInputNames (const NameArray &)
 
bool AddRequiredInputName (const DataObjectIdentifierType &)
 
bool AddRequiredInputName (const DataObjectIdentifierType &, DataObjectPointerArraySizeType idx)
 
void AddOptionalInputName (const DataObjectIdentifierType &)
 
void AddOptionalInputName (const DataObjectIdentifierType &, DataObjectPointerArraySizeType idx)
 
DataObject * GetOutput (const DataObjectIdentifierType &key)
 
const DataObject * GetOutput (const DataObjectIdentifierType &key) const
 
virtual void SetPrimaryOutputName (const DataObjectIdentifierType &key)
 
virtual const char * GetPrimaryOutputName () const
 
DataObject * GetOutput (DataObjectPointerArraySizeType i)
 
const DataObject * GetOutput (DataObjectPointerArraySizeType i) const
 
virtual void SetOutput (const DataObjectIdentifierType &name, DataObject *output)
 
virtual void RemoveOutput (const DataObjectIdentifierType &key)
 
DataObject * GetPrimaryOutput ()
 
const DataObject * GetPrimaryOutput () const
 
virtual void SetPrimaryOutput (DataObject *object)
 
virtual void SetNthOutput (DataObjectPointerArraySizeType idx, DataObject *output)
 
virtual void AddOutput (DataObject *output)
 
virtual void RemoveOutput (DataObjectPointerArraySizeType idx)
 
virtual void SetNumberOfRequiredOutputs (DataObjectPointerArraySizeType _arg)
 
virtual const DataObjectPointerArraySizeType & GetNumberOfRequiredOutputs () const
 
void SetNumberOfIndexedOutputs (DataObjectPointerArraySizeType num)
 
DataObjectIdentifierType MakeNameFromInputIndex (DataObjectPointerArraySizeType idx) const
 
DataObjectIdentifierType MakeNameFromOutputIndex (DataObjectPointerArraySizeType idx) const
 
DataObjectPointerArraySizeType MakeIndexFromInputName (const DataObjectIdentifierType &name) const
 
DataObjectPointerArraySizeType MakeIndexFromOutputName (const DataObjectIdentifierType &name) const
 
bool IsIndexedInputName (const DataObjectIdentifierType &) const
 
bool IsIndexedOutputName (const DataObjectIdentifierType &) const
 
virtual void VerifyPreconditions () ITKv5_CONST
 
virtual void GenerateOutputRequestedRegion (DataObject *output)
 
virtual void GenerateOutputInformation ()
 
virtual void PropagateResetPipeline ()
 
virtual void CacheInputReleaseDataFlags ()
 
virtual void RestoreInputReleaseDataFlags ()
 
virtual bool GetThreaderUpdateProgress () const
 
virtual void ThreaderUpdateProgressOn ()
 
virtual void ThreaderUpdateProgressOff ()
 
virtual void SetThreaderUpdateProgress (bool arg)
 
- Protected Member Functions inherited from itk::Object
 Object ()
 
 ~Object () override
 
bool PrintObservers (std::ostream &os, Indent indent) const
 
virtual void SetTimeStamp (const TimeStamp &timeStamp)
 
- Protected Member Functions inherited from itk::LightObject
virtual LightObject::Pointer InternalClone () const
 
 LightObject ()
 
virtual void PrintHeader (std::ostream &os, Indent indent) const
 
virtual void PrintTrailer (std::ostream &os, Indent indent) const
 
virtual ~LightObject ()
 

Protected Attributes

unsigned int m_ReinitializeCounter
 
- Protected Attributes inherited from itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TIdCell >
IdCellType m_FunctionCount
 
std::vector< InputImagePointer > m_LevelSet
 
VectorIdCellType m_Lookup
 
KdTreePointer m_KdTree
 
unsigned int m_ElapsedIterations
 
double m_MaximumRMSError
 
double m_RMSChange
 
unsigned int m_NumberOfIterations
 
std::vector< FiniteDifferenceFunctionPointer > m_DifferenceFunctions
 
bool m_UseImageSpacing
 
- Protected Attributes inherited from itk::ImageSource< TOutputImage >
bool m_DynamicMultiThreading
 
- Protected Attributes inherited from itk::ProcessObject
bool m_Updating
 
TimeStamp m_OutputInformationMTime
 
- Protected Attributes inherited from itk::LightObject
std::atomic< int > m_ReferenceCount
 

Private Member Functions

void AllocateUpdateBuffer () override
 
TimeStepType CalculateChange () override
 

Private Attributes

std::vector< InputImagePointer > m_UpdateBuffers
 

Additional Inherited Members

- Static Public Member Functions inherited from itk::ImageToImageFilter< TFeatureImage, TOutputImage >
static void SetGlobalDefaultDirectionTolerance (double)
 
static double GetGlobalDefaultDirectionTolerance ()
 
static void SetGlobalDefaultCoordinateTolerance (double)
 
static double GetGlobalDefaultCoordinateTolerance ()
 
- Static Public Member Functions inherited from itk::Object
static bool GetGlobalWarningDisplay ()
 
static void GlobalWarningDisplayOff ()
 
static void GlobalWarningDisplayOn ()
 
static Pointer New ()
 
static void SetGlobalWarningDisplay (bool val)
 
- Static Public Member Functions inherited from itk::LightObject
static void BreakOnError ()
 
static Pointer New ()
 
- Protected Types inherited from itk::ImageToImageFilter< TFeatureImage, TOutputImage >
using InputToOutputRegionCopierType = ImageToImageFilterDetail::ImageRegionCopier< Self::OutputImageDimension, Self::InputImageDimension >
 
using OutputToInputRegionCopierType = ImageToImageFilterDetail::ImageRegionCopier< Self::InputImageDimension, Self::OutputImageDimension >
 
- Static Protected Member Functions inherited from itk::ImageSource< TOutputImage >
static const ImageRegionSplitterBase * GetGlobalDefaultSplitter ()
 
static ITK_THREAD_RETURN_FUNCTION_CALL_CONVENTION ThreaderCallback (void *arg)
 
- Static Protected Member Functions inherited from itk::ProcessObject
static constexpr float progressFixedToFloat (uint32_t fixed)
 
static uint32_t progressFloatToFixed (float f)
 

Detailed Description

template<typename TInputImage, typename TFeatureImage, typename TOutputImage, typename TFunction, typename TIdCell = unsigned int>
class itk::MultiphaseDenseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TIdCell >

This filter implements a layer of the finite difference solver hierarchy that performs "dense" iteration, ie. iteration over all pixels in the input and output at each change calculation and update step. Dense iteration is in contrast to a "sparse" iteration over a subset of the pixels. See documentation for FiniteDifferenceImageFilter for an overview of the iterative finite difference algorithm:

$u_{\mathbf{i}}^{n+1}=u^n_{\mathbf{i}}+\Delta u^n_{\mathbf{i}}\Delta t$
The generic code for performing iterations and updates at each time step is inherited from the parent class. This class defines an update buffer for $ \Delta $ and the methods CalculateChange() and ApplyUpdate(). These methods are designed to automatically thread their execution. $ \Delta $ is defined as an image of identical size and type as the output image.
As we descend through each layer in the hierarchy, we know more and more about the specific application of our filter. At this level, we have committed to iteration over each pixel in an image. We take advantage of that knowledge to multithread the iteration and update methods.
Inputs and Outputs
This is an image to image filter. The specific types of the images are not fixed at this level in the hierarchy.
How to use this class
This filter is only one layer in a branch the finite difference solver hierarchy. It does not define the function used in the CalculateChange() and it does not define the stopping criteria (Halt method). To use this class, subclass it to a specific instance that supplies a function and Halt() method.

Based on the paper: 

   "An active contour model without edges"
    T. Chan and L. Vese.
    In Scale-Space Theories in Computer Vision, pages 141-151, 1999.
Author
Mosaliganti K., Smith B., Gelas A., Gouaillard A., Megason S.

This code was taken from the Insight Journal paper: 

"Cell Tracking using Coupled Active Surfaces for Nuclei and Membranes"
http://www.insight-journal.org/browse/publication/642
https://hdl.handle.net/10380/3055

That is based on the papers: 

"Level Set Segmentation: Active Contours without edge"
http://www.insight-journal.org/browse/publication/322
https://hdl.handle.net/1926/1532

and

"Level set segmentation using coupled active surfaces"
http://www.insight-journal.org/browse/publication/323
https://hdl.handle.net/1926/1533
See also
FiniteDifferenceImageFilter

Definition at line 105 of file itkMultiphaseDenseFiniteDifferenceImageFilter.h.

Member Typedef Documentation

◆ ConstPointer

template<typename TInputImage, typename TFeatureImage, typename TOutputImage, typename TFunction, typename TIdCell = unsigned int>
using itk::MultiphaseDenseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TIdCell >::ConstPointer = SmartPointer<const Self>

Definition at line 116 of file itkMultiphaseDenseFiniteDifferenceImageFilter.h.

◆ FaceCalculatorType

template<typename TInputImage, typename TFeatureImage, typename TOutputImage, typename TFunction, typename TIdCell = unsigned int>
using itk::MultiphaseDenseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TIdCell >::FaceCalculatorType = NeighborhoodAlgorithm::ImageBoundaryFacesCalculator<InputImageType>

Definition at line 170 of file itkMultiphaseDenseFiniteDifferenceImageFilter.h.

◆ FaceListType

template<typename TInputImage, typename TFeatureImage, typename TOutputImage, typename TFunction, typename TIdCell = unsigned int>
using itk::MultiphaseDenseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TIdCell >::FaceListType = typename FaceCalculatorType::FaceListType

Definition at line 171 of file itkMultiphaseDenseFiniteDifferenceImageFilter.h.

◆ FeatureImagePointer

template<typename TInputImage, typename TFeatureImage, typename TOutputImage, typename TFunction, typename TIdCell = unsigned int>
using itk::MultiphaseDenseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TIdCell >::FeatureImagePointer = typename Superclass::FeatureImagePointer

Definition at line 140 of file itkMultiphaseDenseFiniteDifferenceImageFilter.h.

◆ FeatureImageType

template<typename TInputImage, typename TFeatureImage, typename TOutputImage, typename TFunction, typename TIdCell = unsigned int>
using itk::MultiphaseDenseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TIdCell >::FeatureImageType = typename Superclass::FeatureImageType

Definition at line 138 of file itkMultiphaseDenseFiniteDifferenceImageFilter.h.

◆ FeaturePixelType

template<typename TInputImage, typename TFeatureImage, typename TOutputImage, typename TFunction, typename TIdCell = unsigned int>
using itk::MultiphaseDenseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TIdCell >::FeaturePixelType = typename Superclass::FeaturePixelType

Definition at line 144 of file itkMultiphaseDenseFiniteDifferenceImageFilter.h.

◆ FeaturePointType

template<typename TInputImage, typename TFeatureImage, typename TOutputImage, typename TFunction, typename TIdCell = unsigned int>
using itk::MultiphaseDenseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TIdCell >::FeaturePointType = typename Superclass::FeaturePointType

Definition at line 143 of file itkMultiphaseDenseFiniteDifferenceImageFilter.h.

◆ FeatureRegionType

template<typename TInputImage, typename TFeatureImage, typename TOutputImage, typename TFunction, typename TIdCell = unsigned int>
using itk::MultiphaseDenseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TIdCell >::FeatureRegionType = typename Superclass::FeatureRegionType

Definition at line 141 of file itkMultiphaseDenseFiniteDifferenceImageFilter.h.

◆ FeatureSizeType

template<typename TInputImage, typename TFeatureImage, typename TOutputImage, typename TFunction, typename TIdCell = unsigned int>
using itk::MultiphaseDenseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TIdCell >::FeatureSizeType = typename Superclass::FeatureSizeType

Definition at line 139 of file itkMultiphaseDenseFiniteDifferenceImageFilter.h.

◆ FeatureSpacingType

template<typename TInputImage, typename TFeatureImage, typename TOutputImage, typename TFunction, typename TIdCell = unsigned int>
using itk::MultiphaseDenseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TIdCell >::FeatureSpacingType = typename Superclass::FeatureSpacingType

Definition at line 142 of file itkMultiphaseDenseFiniteDifferenceImageFilter.h.

◆ FiniteDifferenceFunctionPointer

template<typename TInputImage, typename TFeatureImage, typename TOutputImage, typename TFunction, typename TIdCell = unsigned int>
using itk::MultiphaseDenseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TIdCell >::FiniteDifferenceFunctionPointer = typename Superclass::FiniteDifferenceFunctionPointer

Definition at line 164 of file itkMultiphaseDenseFiniteDifferenceImageFilter.h.

◆ FiniteDifferenceFunctionType

template<typename TInputImage, typename TFeatureImage, typename TOutputImage, typename TFunction, typename TIdCell = unsigned int>
using itk::MultiphaseDenseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TIdCell >::FiniteDifferenceFunctionType = typename Superclass::FiniteDifferenceFunctionType

Definition at line 163 of file itkMultiphaseDenseFiniteDifferenceImageFilter.h.

◆ IdCellType

template<typename TInputImage, typename TFeatureImage, typename TOutputImage, typename TFunction, typename TIdCell = unsigned int>
using itk::MultiphaseDenseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TIdCell >::IdCellType = typename Superclass::IdCellType

Definition at line 155 of file itkMultiphaseDenseFiniteDifferenceImageFilter.h.

◆ InputImagePointer

template<typename TInputImage, typename TFeatureImage, typename TOutputImage, typename TFunction, typename TIdCell = unsigned int>
using itk::MultiphaseDenseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TIdCell >::InputImagePointer = typename Superclass::InputImagePointer

Definition at line 127 of file itkMultiphaseDenseFiniteDifferenceImageFilter.h.

◆ InputImageType

template<typename TInputImage, typename TFeatureImage, typename TOutputImage, typename TFunction, typename TIdCell = unsigned int>
using itk::MultiphaseDenseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TIdCell >::InputImageType = typename Superclass::InputImageType

Convenient type alias

Definition at line 126 of file itkMultiphaseDenseFiniteDifferenceImageFilter.h.

◆ InputIndexType

template<typename TInputImage, typename TFeatureImage, typename TOutputImage, typename TFunction, typename TIdCell = unsigned int>
using itk::MultiphaseDenseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TIdCell >::InputIndexType = typename Superclass::InputIndexType

Definition at line 131 of file itkMultiphaseDenseFiniteDifferenceImageFilter.h.

◆ InputIndexValueType

template<typename TInputImage, typename TFeatureImage, typename TOutputImage, typename TFunction, typename TIdCell = unsigned int>
using itk::MultiphaseDenseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TIdCell >::InputIndexValueType = typename Superclass::InputIndexValueType

Definition at line 132 of file itkMultiphaseDenseFiniteDifferenceImageFilter.h.

◆ InputPixelType

template<typename TInputImage, typename TFeatureImage, typename TOutputImage, typename TFunction, typename TIdCell = unsigned int>
using itk::MultiphaseDenseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TIdCell >::InputPixelType = typename Superclass::InputPixelType

Definition at line 133 of file itkMultiphaseDenseFiniteDifferenceImageFilter.h.

◆ InputPointType

template<typename TInputImage, typename TFeatureImage, typename TOutputImage, typename TFunction, typename TIdCell = unsigned int>
using itk::MultiphaseDenseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TIdCell >::InputPointType = typename Superclass::InputPointType

Definition at line 134 of file itkMultiphaseDenseFiniteDifferenceImageFilter.h.

◆ InputRegionType

template<typename TInputImage, typename TFeatureImage, typename TOutputImage, typename TFunction, typename TIdCell = unsigned int>
using itk::MultiphaseDenseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TIdCell >::InputRegionType = typename Superclass::InputRegionType

Definition at line 128 of file itkMultiphaseDenseFiniteDifferenceImageFilter.h.

◆ InputSizeType

template<typename TInputImage, typename TFeatureImage, typename TOutputImage, typename TFunction, typename TIdCell = unsigned int>
using itk::MultiphaseDenseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TIdCell >::InputSizeType = typename Superclass::InputSizeType

Definition at line 129 of file itkMultiphaseDenseFiniteDifferenceImageFilter.h.

◆ InputSizeValueType

template<typename TInputImage, typename TFeatureImage, typename TOutputImage, typename TFunction, typename TIdCell = unsigned int>
using itk::MultiphaseDenseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TIdCell >::InputSizeValueType = typename Superclass::InputSizeValueType

Definition at line 130 of file itkMultiphaseDenseFiniteDifferenceImageFilter.h.

◆ InputSpacingType

template<typename TInputImage, typename TFeatureImage, typename TOutputImage, typename TFunction, typename TIdCell = unsigned int>
using itk::MultiphaseDenseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TIdCell >::InputSpacingType = typename Superclass::InputSpacingType

Definition at line 135 of file itkMultiphaseDenseFiniteDifferenceImageFilter.h.

◆ MaurerPointer

template<typename TInputImage, typename TFeatureImage, typename TOutputImage, typename TFunction, typename TIdCell = unsigned int>
using itk::MultiphaseDenseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TIdCell >::MaurerPointer = typename MaurerType::Pointer

Definition at line 161 of file itkMultiphaseDenseFiniteDifferenceImageFilter.h.

◆ MaurerType

template<typename TInputImage, typename TFeatureImage, typename TOutputImage, typename TFunction, typename TIdCell = unsigned int>
using itk::MultiphaseDenseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TIdCell >::MaurerType = SignedMaurerDistanceMapImageFilter<InputImageType, InputImageType>

Definition at line 160 of file itkMultiphaseDenseFiniteDifferenceImageFilter.h.

◆ NeighborhoodIteratorType

template<typename TInputImage, typename TFeatureImage, typename TOutputImage, typename TFunction, typename TIdCell = unsigned int>
using itk::MultiphaseDenseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TIdCell >::NeighborhoodIteratorType = typename FiniteDifferenceFunctionType::NeighborhoodType

Definition at line 165 of file itkMultiphaseDenseFiniteDifferenceImageFilter.h.

◆ OutputImagePointer

template<typename TInputImage, typename TFeatureImage, typename TOutputImage, typename TFunction, typename TIdCell = unsigned int>
using itk::MultiphaseDenseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TIdCell >::OutputImagePointer = typename Superclass::OutputImagePointer

Definition at line 147 of file itkMultiphaseDenseFiniteDifferenceImageFilter.h.

◆ OutputImageType

template<typename TInputImage, typename TFeatureImage, typename TOutputImage, typename TFunction, typename TIdCell = unsigned int>
using itk::MultiphaseDenseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TIdCell >::OutputImageType = typename Superclass::OutputImageType

Definition at line 146 of file itkMultiphaseDenseFiniteDifferenceImageFilter.h.

◆ OutputIndexType

template<typename TInputImage, typename TFeatureImage, typename TOutputImage, typename TFunction, typename TIdCell = unsigned int>
using itk::MultiphaseDenseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TIdCell >::OutputIndexType = typename Superclass::OutputIndexType

Definition at line 151 of file itkMultiphaseDenseFiniteDifferenceImageFilter.h.

◆ OutputIndexValueType

template<typename TInputImage, typename TFeatureImage, typename TOutputImage, typename TFunction, typename TIdCell = unsigned int>
using itk::MultiphaseDenseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TIdCell >::OutputIndexValueType = typename Superclass::OutputIndexValueType

Definition at line 152 of file itkMultiphaseDenseFiniteDifferenceImageFilter.h.

◆ OutputPixelType

template<typename TInputImage, typename TFeatureImage, typename TOutputImage, typename TFunction, typename TIdCell = unsigned int>
using itk::MultiphaseDenseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TIdCell >::OutputPixelType = typename OutputImageType::PixelType

Definition at line 153 of file itkMultiphaseDenseFiniteDifferenceImageFilter.h.

◆ OutputRegionType

template<typename TInputImage, typename TFeatureImage, typename TOutputImage, typename TFunction, typename TIdCell = unsigned int>
using itk::MultiphaseDenseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TIdCell >::OutputRegionType = typename Superclass::OutputRegionType

Definition at line 148 of file itkMultiphaseDenseFiniteDifferenceImageFilter.h.

◆ OutputSizeType

template<typename TInputImage, typename TFeatureImage, typename TOutputImage, typename TFunction, typename TIdCell = unsigned int>
using itk::MultiphaseDenseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TIdCell >::OutputSizeType = typename Superclass::OutputSizeType

Definition at line 149 of file itkMultiphaseDenseFiniteDifferenceImageFilter.h.

◆ Pointer

template<typename TInputImage, typename TFeatureImage, typename TOutputImage, typename TFunction, typename TIdCell = unsigned int>
using itk::MultiphaseDenseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TIdCell >::Pointer = SmartPointer<Self>

Definition at line 115 of file itkMultiphaseDenseFiniteDifferenceImageFilter.h.

◆ Self

template<typename TInputImage, typename TFeatureImage, typename TOutputImage, typename TFunction, typename TIdCell = unsigned int>
using itk::MultiphaseDenseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TIdCell >::Self = MultiphaseDenseFiniteDifferenceImageFilter

Standard class type aliases

Definition at line 112 of file itkMultiphaseDenseFiniteDifferenceImageFilter.h.

◆ SizeValueType

template<typename TInputImage, typename TFeatureImage, typename TOutputImage, typename TFunction, typename TIdCell = unsigned int>
using itk::MultiphaseDenseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TIdCell >::SizeValueType = typename Superclass::OutputSizeValueType

Definition at line 150 of file itkMultiphaseDenseFiniteDifferenceImageFilter.h.

◆ Superclass

template<typename TInputImage, typename TFeatureImage, typename TOutputImage, typename TFunction, typename TIdCell = unsigned int>
using itk::MultiphaseDenseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TIdCell >::Superclass = MultiphaseFiniteDifferenceImageFilter<TInputImage, TFeatureImage, TOutputImage, TFunction, TIdCell>

Definition at line 114 of file itkMultiphaseDenseFiniteDifferenceImageFilter.h.

◆ ThresholdFilterPointer

template<typename TInputImage, typename TFeatureImage, typename TOutputImage, typename TFunction, typename TIdCell = unsigned int>
using itk::MultiphaseDenseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TIdCell >::ThresholdFilterPointer = typename ThresholdFilterType::Pointer

Definition at line 158 of file itkMultiphaseDenseFiniteDifferenceImageFilter.h.

◆ ThresholdFilterType

template<typename TInputImage, typename TFeatureImage, typename TOutputImage, typename TFunction, typename TIdCell = unsigned int>
using itk::MultiphaseDenseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TIdCell >::ThresholdFilterType = BinaryThresholdImageFilter<InputImageType, InputImageType>

Definition at line 157 of file itkMultiphaseDenseFiniteDifferenceImageFilter.h.

◆ TimeStepType

template<typename TInputImage, typename TFeatureImage, typename TOutputImage, typename TFunction, typename TIdCell = unsigned int>
using itk::MultiphaseDenseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TIdCell >::TimeStepType = typename Superclass::TimeStepType

The value type of a time step. Inherited from the superclass.

Definition at line 168 of file itkMultiphaseDenseFiniteDifferenceImageFilter.h.

◆ ValueType

template<typename TInputImage, typename TFeatureImage, typename TOutputImage, typename TFunction, typename TIdCell = unsigned int>
using itk::MultiphaseDenseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TIdCell >::ValueType = typename InputImageType::ValueType

Definition at line 136 of file itkMultiphaseDenseFiniteDifferenceImageFilter.h.

Constructor & Destructor Documentation

◆ MultiphaseDenseFiniteDifferenceImageFilter()

template<typename TInputImage, typename TFeatureImage, typename TOutputImage, typename TFunction, typename TIdCell = unsigned int>
itk::MultiphaseDenseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TIdCell >::MultiphaseDenseFiniteDifferenceImageFilter ( )
inlineprotected

Definition at line 188 of file itkMultiphaseDenseFiniteDifferenceImageFilter.h.

◆ ~MultiphaseDenseFiniteDifferenceImageFilter()

template<typename TInputImage, typename TFeatureImage, typename TOutputImage, typename TFunction, typename TIdCell = unsigned int>
itk::MultiphaseDenseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TIdCell >::~MultiphaseDenseFiniteDifferenceImageFilter ( )
overrideprotecteddefault

Member Function Documentation

◆ AllocateUpdateBuffer()

template<typename TInputImage, typename TFeatureImage, typename TOutputImage, typename TFunction, typename TIdCell = unsigned int>
void itk::MultiphaseDenseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TIdCell >::AllocateUpdateBuffer ( )
overrideprivatevirtual

This method allocates storage in m_UpdateBuffer. It is called from Superclass::GenerateData().

Implements itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TIdCell >.

◆ ApplyUpdate()

template<typename TInputImage, typename TFeatureImage, typename TOutputImage, typename TFunction, typename TIdCell = unsigned int>
void itk::MultiphaseDenseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TIdCell >::ApplyUpdate ( TimeStepType  dt)
overrideprotected

This method applies changes from the m_UpdateBuffer to the output using the ThreadedApplyUpdate() method and a multithreading mechanism. "dt" is the time step to use for the update of each pixel.

◆ CalculateChange()

template<typename TInputImage, typename TFeatureImage, typename TOutputImage, typename TFunction, typename TIdCell = unsigned int>
TimeStepType itk::MultiphaseDenseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TIdCell >::CalculateChange ( )
overrideprivatevirtual

This method populates an update buffer with changes for each pixel in the output using the ThreadedCalculateChange() method and a multithreading mechanism. Returns value is a time step to be used for the update.

Implements itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TIdCell >.

◆ CopyInputToOutput()

template<typename TInputImage, typename TFeatureImage, typename TOutputImage, typename TFunction, typename TIdCell = unsigned int>
void itk::MultiphaseDenseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TIdCell >::CopyInputToOutput ( )
overrideprotectedvirtual

A simple method to copy the data from the input to the output. ( Supports "read-only" image adaptors in the case where the input image type converts to a different output image type. )

Implements itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TIdCell >.

◆ GetNameOfClass()

template<typename TInputImage, typename TFeatureImage, typename TOutputImage, typename TFunction, typename TIdCell = unsigned int>
virtual const char* itk::MultiphaseDenseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TIdCell >::GetNameOfClass ( ) const
virtual

Run-time type information (and related methods)

Reimplemented from itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TIdCell >.

Reimplemented in itk::ScalarChanAndVeseDenseLevelSetImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TSharedData >.

◆ GetReinitializeCounter()

template<typename TInputImage, typename TFeatureImage, typename TOutputImage, typename TFunction, typename TIdCell = unsigned int>
virtual unsigned int itk::MultiphaseDenseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TIdCell >::GetReinitializeCounter ( )
virtual

◆ PostProcessOutput()

template<typename TInputImage, typename TFeatureImage, typename TOutputImage, typename TFunction, typename TIdCell = unsigned int>
void itk::MultiphaseDenseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TIdCell >::PostProcessOutput ( )
overrideprotectedvirtual

This method is called after the solution has been generated to allow subclasses to apply some further processing to the output.

Reimplemented from itk::MultiphaseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TIdCell >.

◆ PrintSelf()

template<typename TInputImage, typename TFeatureImage, typename TOutputImage, typename TFunction, typename TIdCell = unsigned int>
void itk::MultiphaseDenseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TIdCell >::PrintSelf ( std::ostream &  os,
Indent  indent 
) const
overrideprotectedvirtual

Get the output data of this process object. The output of this function is not valid until an appropriate Update() method has been called, either explicitly or implicitly. Both the filter itself and the data object have Update() methods, and both methods update the data. Here are three ways to use GetOutput() and make sure the data is valid. In these examples, image is a pointer to some Image object, and the particular ProcessObjects involved are filters. The same examples apply to non-image (e.g. Mesh) data as well.

anotherFilter->SetInput( someFilter->GetOutput() );
anotherFilter->Update();

In this situation, someFilter and anotherFilter are said to constitute a pipeline.

image = someFilter->GetOutput();
image->Update();
someFilter->Update();
image = someFilter->GetOutput();

(In the above example, the two lines of code can be in either order.)

Note that Update() is not called automatically except within a pipeline as in the first example. When streaming (using a StreamingImageFilter) is activated, it may be more efficient to use a pipeline than to call Update() once for each filter in turn.

For an image, the data generated is for the requested Region, which can be set using ImageBase::SetRequestedRegion(). By default, the largest possible region is requested.

For Filters which have multiple outputs of different types, the GetOutput() method assumes the output is of OutputImageType. For the GetOutput(unsigned int) method, a dynamic_cast is performed incase the filter has outputs of different types or image types. Derived classes should have names get methods for these outputs.

Reimplemented from itk::ImageSource< TOutputImage >.

◆ SetFunctionCount()

template<typename TInputImage, typename TFeatureImage, typename TOutputImage, typename TFunction, typename TIdCell = unsigned int>
void itk::MultiphaseDenseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TIdCell >::SetFunctionCount ( const IdCellType &  n)

◆ SetReinitializeCounter()

template<typename TInputImage, typename TFeatureImage, typename TOutputImage, typename TFunction, typename TIdCell = unsigned int>
virtual void itk::MultiphaseDenseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TIdCell >::SetReinitializeCounter ( unsigned int  _arg)
virtual

Member Data Documentation

◆ ImageDimension

template<typename TInputImage, typename TFeatureImage, typename TOutputImage, typename TFunction, typename TIdCell = unsigned int>
constexpr unsigned int itk::MultiphaseDenseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TIdCell >::ImageDimension = Superclass::ImageDimension
staticconstexpr

Dimensionality of input and output data is assumed to be the same. It is inherited from the superclass.

Definition at line 123 of file itkMultiphaseDenseFiniteDifferenceImageFilter.h.

◆ m_ReinitializeCounter

template<typename TInputImage, typename TFeatureImage, typename TOutputImage, typename TFunction, typename TIdCell = unsigned int>
unsigned int itk::MultiphaseDenseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TIdCell >::m_ReinitializeCounter
protected

Definition at line 215 of file itkMultiphaseDenseFiniteDifferenceImageFilter.h.

◆ m_UpdateBuffers

template<typename TInputImage, typename TFeatureImage, typename TOutputImage, typename TFunction, typename TIdCell = unsigned int>
std::vector<InputImagePointer> itk::MultiphaseDenseFiniteDifferenceImageFilter< TInputImage, TFeatureImage, TOutputImage, TFunction, TIdCell >::m_UpdateBuffers
private

The buffer that holds the updates for an iteration of the algorithm.

Definition at line 231 of file itkMultiphaseDenseFiniteDifferenceImageFilter.h.

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