itk::RichardsonLucyDeconvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision > Class Template Reference

#include <itkRichardsonLucyDeconvolutionImageFilter.h>

Inheritance diagram for itk::RichardsonLucyDeconvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >:

Collaboration diagram for itk::RichardsonLucyDeconvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >:

Public Types
using	ConstPointer = SmartPointer< const Self >
using	InputImageType = TInputImage
using	InternalComplexImagePointerType = typename Superclass::InternalComplexImagePointerType
using	InternalComplexImageType = typename Superclass::InternalComplexImageType
using	InternalComplexType = typename Superclass::InternalComplexType
using	InternalImagePointerType = typename Superclass::InternalImagePointerType
using	InternalImageType = typename Superclass::InternalImageType
using	KernelImageType = TKernelImage
using	OutputImageType = TOutputImage
using	Pointer = SmartPointer< Self >
using	Self = RichardsonLucyDeconvolutionImageFilter
using	Superclass = IterativeDeconvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >
Public Types inherited from itk::IterativeDeconvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >
using	ConstPointer = SmartPointer< const Self >
using	InputImageType = TInputImage
using	InternalComplexImagePointerType = typename Superclass::InternalComplexImagePointerType
using	InternalComplexImageType = typename Superclass::InternalComplexImageType
using	InternalComplexType = typename Superclass::InternalComplexType
using	InternalImagePointerType = typename Superclass::InternalImagePointerType
using	InternalImageType = typename Superclass::InternalImageType
using	KernelImageType = TKernelImage
using	OutputImageType = TOutputImage
using	Pointer = SmartPointer< Self >
using	Self = IterativeDeconvolutionImageFilter
using	Superclass = FFTConvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >
Public Types inherited from itk::FFTConvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >
using	BoundaryConditionPointerType = typename Superclass::BoundaryConditionPointerType
using	BoundaryConditionType = typename Superclass::BoundaryConditionType
using	ConstPointer = SmartPointer< const Self >
using	InputImageType = TInputImage
using	InputIndexType = typename InputImageType::IndexType
using	InputPixelType = typename InputImageType::PixelType
using	InputRegionType = typename InputImageType::RegionType
using	InputSizeType = typename InputImageType::SizeType
using	InternalComplexImagePointerType = typename InternalComplexImageType::Pointer
using	InternalComplexImageType = Image< InternalComplexType, TInputImage::ImageDimension >
using	InternalComplexType = std::complex< TInternalPrecision >
using	InternalImagePointerType = typename InternalImageType::Pointer
using	InternalImageType = Image< TInternalPrecision, TInputImage::ImageDimension >
using	KernelImageType = TKernelImage
using	KernelIndexType = typename KernelImageType::IndexType
using	KernelPixelType = typename KernelImageType::PixelType
using	KernelRegionType = typename KernelImageType::RegionType
using	KernelSizeType = typename KernelImageType::SizeType
using	OutputImageType = TOutputImage
using	OutputIndexType = typename OutputImageType::IndexType
using	OutputPixelType = typename OutputImageType::PixelType
using	OutputRegionType = typename OutputImageType::RegionType
using	OutputSizeType = typename OutputImageType::SizeType
using	Pointer = SmartPointer< Self >
using	Self = FFTConvolutionImageFilter
using	SizeValueType = typename InputSizeType::SizeValueType
using	Superclass = ConvolutionImageFilterBase< TInputImage, TKernelImage, TOutputImage >
Public Types inherited from itk::ConvolutionImageFilterBase< TInputImage, TKernelImage, TOutputImage >
using	BoundaryConditionPointerType = BoundaryConditionType *
using	BoundaryConditionType = ImageBoundaryCondition< TInputImage >
using	ConstPointer = SmartPointer< const Self >
using	DefaultBoundaryConditionType = ZeroFluxNeumannBoundaryCondition< TInputImage >
using	InputImageType = TInputImage
using	InputIndexType = typename InputImageType::IndexType
using	InputPixelType = typename InputImageType::PixelType
using	InputRegionType = typename InputImageType::RegionType
using	InputSizeType = typename InputImageType::SizeType
using	KernelImageType = TKernelImage
using	KernelIndexType = typename KernelImageType::IndexType
using	KernelPixelType = typename KernelImageType::PixelType
using	KernelRegionType = typename KernelImageType::RegionType
using	KernelSizeType = typename KernelImageType::SizeType
using	OutputImageType = TOutputImage
using	OutputIndexType = typename OutputImageType::IndexType
using	OutputPixelType = typename OutputImageType::PixelType
using	OutputRegionType = typename OutputImageType::RegionType
using	OutputSizeType = typename OutputImageType::SizeType
using	Pointer = SmartPointer< Self >
using	Self = ConvolutionImageFilterBase
using	SizeValueType = typename InputSizeType::SizeValueType
using	Superclass = ImageToImageFilter< TInputImage, TOutputImage >
using	OutputRegionModeEnum = ConvolutionImageFilterBaseEnums::ConvolutionImageFilterOutputRegion
Public Types inherited from itk::ImageToImageFilter< TInputImage, TOutputImage >
using	ConstPointer = SmartPointer< const Self >
using	InputImageConstPointer = typename InputImageType::ConstPointer
using	InputImagePixelType = typename InputImageType::PixelType
using	InputImagePointer = typename InputImageType::Pointer
using	InputImageRegionType = typename InputImageType::RegionType
using	InputImageType = TInputImage
using	OutputImagePixelType = typename Superclass::OutputImagePixelType
using	OutputImageRegionType = typename Superclass::OutputImageRegionType
using	Pointer = SmartPointer< Self >
using	Self = ImageToImageFilter
using	Superclass = ImageSource< TOutputImage >
Public Types inherited from itk::ImageSource< TOutputImage >
using	ConstPointer = SmartPointer< const Self >
using	DataObjectIdentifierType = Superclass::DataObjectIdentifierType
using	DataObjectPointer = DataObject::Pointer
using	DataObjectPointerArraySizeType = Superclass::DataObjectPointerArraySizeType
using	OutputImagePixelType = typename OutputImageType::PixelType
using	OutputImagePointer = typename OutputImageType::Pointer
using	OutputImageRegionType = typename OutputImageType::RegionType
using	OutputImageType = TOutputImage
using	Pointer = SmartPointer< Self >
using	Self = ImageSource
using	Superclass = ProcessObject
Public Types inherited from itk::ProcessObject
using	ConstPointer = SmartPointer< const Self >
using	DataObjectIdentifierType = DataObject::DataObjectIdentifierType
using	DataObjectPointer = DataObject::Pointer
using	DataObjectPointerArray = std::vector< DataObjectPointer >
using	DataObjectPointerArraySizeType = DataObjectPointerArray::size_type
using	MultiThreaderType = MultiThreaderBase
using	NameArray = std::vector< DataObjectIdentifierType >
using	Pointer = SmartPointer< Self >
using	Self = ProcessObject
using	Superclass = Object
Public Types inherited from itk::Object
using	ConstPointer = SmartPointer< const Self >
using	Pointer = SmartPointer< Self >
using	Self = Object
using	Superclass = LightObject
Public Types inherited from itk::LightObject
using	ConstPointer = SmartPointer< const Self >
using	Pointer = SmartPointer< Self >
using	Self = LightObject

Public Member Functions
virtual ::itk::LightObject::Pointer	CreateAnother () const
virtual const char *	GetNameOfClass () const
Public Member Functions inherited from itk::IterativeDeconvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >
virtual void	SetNumberOfIterations (unsigned int _arg)
virtual unsigned int	GetNumberOfIterations ()
virtual InternalImageType *	GetModifiableCurrentEstimate ()
virtual const InternalImageType *	GetCurrentEstimate () const
void	SetStopIteration (bool stop)
virtual bool	GetStopIteration () const
virtual unsigned int	GetIteration () const
Public Member Functions inherited from itk::FFTConvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >
virtual SizeValueType	GetSizeGreatestPrimeFactor ()
virtual void	SetSizeGreatestPrimeFactor (SizeValueType _arg)
Public Member Functions inherited from itk::ConvolutionImageFilterBase< TInputImage, TKernelImage, TOutputImage >
virtual void	SetBoundaryCondition (BoundaryConditionPointerType _arg)
virtual BoundaryConditionPointerType	GetBoundaryCondition () const
virtual void	SetKernelImage (const KernelImageType *input)
virtual const KernelImageType *	GetKernelImage () const
virtual void	SetNormalize (bool _arg)
virtual bool	GetNormalize () const
virtual void	NormalizeOn ()
virtual void	NormalizeOff ()
virtual void	SetOutputRegionMode (const OutputRegionModeEnum _arg)
virtual OutputRegionModeEnum	GetOutputRegionMode () const
virtual void	SetOutputRegionModeToSame ()
virtual void	SetOutputRegionModeToValid ()
Public Member Functions inherited from itk::ImageToImageFilter< TInputImage, TOutputImage >
const InputImageType *	GetInput () const
const InputImageType *	GetInput (unsigned int idx) const
void	PopBackInput () override
void	PopFrontInput () override
virtual void	PushBackInput (const InputImageType *input)
virtual void	PushFrontInput (const InputImageType *input)
virtual void	SetInput (const DataObjectIdentifierType &key, DataObject *input)
virtual void	SetInput (const InputImageType *input)
virtual void	SetInput (unsigned int, const TInputImage *image)
virtual void	SetCoordinateTolerance (double _arg)
virtual double	GetCoordinateTolerance () const
virtual void	SetDirectionTolerance (double _arg)
virtual double	GetDirectionTolerance () const
Public Member Functions inherited from itk::ImageSource< TOutputImage >
OutputImageType *	GetOutput ()
const OutputImageType *	GetOutput () const
OutputImageType *	GetOutput (unsigned int idx)
virtual void	GraftOutput (DataObject *graft)
virtual void	GraftOutput (const DataObjectIdentifierType &key, DataObject *graft)
virtual void	GraftNthOutput (unsigned int idx, DataObject *graft)
ProcessObject::DataObjectPointer	MakeOutput (ProcessObject::DataObjectPointerArraySizeType idx) override
ProcessObject::DataObjectPointer	MakeOutput (const ProcessObject::DataObjectIdentifierType &) override
Public Member Functions inherited from itk::ProcessObject
virtual void	AbortGenerateDataOff ()
virtual void	AbortGenerateDataOn ()
virtual void	EnlargeOutputRequestedRegion (DataObject *)
virtual const bool &	GetAbortGenerateData () const
DataObjectPointerArray	GetIndexedInputs ()
DataObjectPointerArray	GetIndexedOutputs ()
NameArray	GetInputNames () const
DataObjectPointerArray	GetInputs ()
DataObjectPointerArraySizeType	GetNumberOfIndexedInputs () const
DataObjectPointerArraySizeType	GetNumberOfIndexedOutputs () const
DataObjectPointerArraySizeType	GetNumberOfInputs () const
DataObjectPointerArraySizeType	GetNumberOfOutputs () const
virtual DataObjectPointerArraySizeType	GetNumberOfValidRequiredInputs () const
NameArray	GetOutputNames () const
DataObjectPointerArray	GetOutputs ()
virtual float	GetProgress () const
NameArray	GetRequiredInputNames () const
bool	HasInput (const DataObjectIdentifierType &key) const
bool	HasOutput (const DataObjectIdentifierType &key) const
void	IncrementProgress (float increment)
virtual void	PropagateRequestedRegion (DataObject *output)
virtual void	ResetPipeline ()
virtual void	SetAbortGenerateData (bool _arg)
virtual void	Update ()
virtual void	UpdateLargestPossibleRegion ()
virtual void	UpdateOutputData (DataObject *output)
virtual void	UpdateOutputInformation ()
void	UpdateProgress (float progress)
virtual void	SetReleaseDataFlag (bool val)
virtual bool	GetReleaseDataFlag () const
void	ReleaseDataFlagOn ()
void	ReleaseDataFlagOff ()
virtual void	SetReleaseDataBeforeUpdateFlag (bool _arg)
virtual const bool &	GetReleaseDataBeforeUpdateFlag () const
virtual void	ReleaseDataBeforeUpdateFlagOn ()
virtual void	ReleaseDataBeforeUpdateFlagOff ()
virtual void	SetNumberOfWorkUnits (ThreadIdType _arg)
virtual const ThreadIdType &	GetNumberOfWorkUnits () const
MultiThreaderType *	GetMultiThreader () const
void	SetMultiThreader (MultiThreaderType *threader)
virtual void	PrepareOutputs ()
Public Member Functions inherited from itk::Object
unsigned long	AddObserver (const EventObject &event, Command *)
unsigned long	AddObserver (const EventObject &event, Command *) const
unsigned long	AddObserver (const EventObject &event, std::function< void(const EventObject &)> function) const
virtual void	DebugOff () const
virtual void	DebugOn () const
Command *	GetCommand (unsigned long tag)
bool	GetDebug () const
MetaDataDictionary &	GetMetaDataDictionary ()
const MetaDataDictionary &	GetMetaDataDictionary () const
virtual ModifiedTimeType	GetMTime () const
virtual const TimeStamp &	GetTimeStamp () const
bool	HasObserver (const EventObject &event) const
void	InvokeEvent (const EventObject &)
void	InvokeEvent (const EventObject &) const
virtual void	Modified () const
void	Register () const override
void	RemoveAllObservers ()
void	RemoveObserver (unsigned long tag)
void	SetDebug (bool debugFlag) const
void	SetReferenceCount (int) override
void	UnRegister () const noexcept override
void	SetMetaDataDictionary (const MetaDataDictionary &rhs)
void	SetMetaDataDictionary (MetaDataDictionary &&rrhs)
virtual void	SetObjectName (std::string _arg)
virtual const std::string &	GetObjectName () const
Public Member Functions inherited from itk::LightObject
Pointer	Clone () const
virtual void	Delete ()
virtual int	GetReferenceCount () const
void	Print (std::ostream &os, Indent indent=0) const

Static Public Member Functions
static Pointer	New ()
Static Public Member Functions inherited from itk::FFTConvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >
static Pointer	New ()
Static Public Member Functions inherited from itk::ImageToImageFilter< TInputImage, TOutputImage >
static void	SetGlobalDefaultDirectionTolerance (double)
static double	GetGlobalDefaultDirectionTolerance ()
static void	SetGlobalDefaultCoordinateTolerance (double)
static double	GetGlobalDefaultCoordinateTolerance ()
Static Public Member Functions inherited from itk::Object
static bool	GetGlobalWarningDisplay ()
static void	GlobalWarningDisplayOff ()
static void	GlobalWarningDisplayOn ()
static Pointer	New ()
static void	SetGlobalWarningDisplay (bool val)
Static Public Member Functions inherited from itk::LightObject
static void	BreakOnError ()
static Pointer	New ()

Protected Types
using	FFTFilterType = typename Superclass::FFTFilterType
using	IFFTFilterType = typename Superclass::IFFTFilterType
Protected Types inherited from itk::IterativeDeconvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >
using	FFTFilterType = typename Superclass::FFTFilterType
using	IFFTFilterType = typename Superclass::IFFTFilterType
Protected Types inherited from itk::FFTConvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >
using	FFTFilterType = RealToHalfHermitianForwardFFTImageFilter< InternalImageType, InternalComplexImageType >
using	IFFTFilterType = HalfHermitianToRealInverseFFTImageFilter< InternalComplexImageType, InternalImageType >
Protected Types inherited from itk::ImageToImageFilter< TInputImage, TOutputImage >
using	InputToOutputRegionCopierType = ImageToImageFilterDetail::ImageRegionCopier< Self::OutputImageDimension, Self::InputImageDimension >
using	OutputToInputRegionCopierType = ImageToImageFilterDetail::ImageRegionCopier< Self::InputImageDimension, Self::OutputImageDimension >

Protected Member Functions
void	Finish (ProgressAccumulator *progress, float progressWeight) override
void	Initialize (ProgressAccumulator *progress, float progressWeight, float iterationProgressWeight) override
void	Iteration (ProgressAccumulator *progress, float iterationProgressWeight) override
void	PrintSelf (std::ostream &os, Indent indent) const override
	RichardsonLucyDeconvolutionImageFilter ()
	~RichardsonLucyDeconvolutionImageFilter () override
Protected Member Functions inherited from itk::IterativeDeconvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >
	IterativeDeconvolutionImageFilter ()
	~IterativeDeconvolutionImageFilter () override
void	GenerateInputRequestedRegion () override
void	GenerateData () override
Protected Member Functions inherited from itk::FFTConvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >
void	CropOutput (InternalImageType *paddedOutput, ProgressAccumulator *progress, float progressWeight)
	FFTConvolutionImageFilter ()
InputSizeType	GetPadLowerBound () const
InputSizeType	GetPadSize () const
bool	GetXDimensionIsOdd () const
void	PadInput (const InputImageType *input, InternalImagePointerType &paddedInput, ProgressAccumulator *progress, float progressWeight)
void	PrepareInput (const InputImageType *input, InternalComplexImagePointerType &preparedInput, ProgressAccumulator *progress, float progressWeight)
void	PrepareInputs (const InputImageType *input, const KernelImageType *kernel, InternalComplexImagePointerType &preparedInput, InternalComplexImagePointerType &preparedKernel, ProgressAccumulator *progress, float progressWeight)
void	PrepareKernel (const KernelImageType *kernel, InternalComplexImagePointerType &preparedKernel, ProgressAccumulator *progress, float progressWeight)
void	ProduceOutput (InternalComplexImageType *paddedOutput, ProgressAccumulator *progress, float progressWeight)
void	TransformPaddedInput (const InternalImageType *paddedInput, InternalComplexImagePointerType &transformedInput, ProgressAccumulator *progress, float progressWeight)
	~FFTConvolutionImageFilter () override=default
Protected Member Functions inherited from itk::ConvolutionImageFilterBase< TInputImage, TKernelImage, TOutputImage >
	ConvolutionImageFilterBase ()
	~ConvolutionImageFilterBase () override=default
void	GenerateOutputInformation () override
OutputRegionType	GetValidRegion () const
void	VerifyInputInformation () ITKv5_CONST override
Protected Member Functions inherited from itk::ImageToImageFilter< TInputImage, TOutputImage >
	ImageToImageFilter ()
	~ImageToImageFilter () override=default
virtual void	CallCopyOutputRegionToInputRegion (InputImageRegionType &destRegion, const OutputImageRegionType &srcRegion)
virtual void	CallCopyInputRegionToOutputRegion (OutputImageRegionType &destRegion, const InputImageRegionType &srcRegion)
void	PushBackInput (const DataObject *input) override
void	PushFrontInput (const DataObject *input) override
Protected Member Functions inherited from itk::ImageSource< TOutputImage >
	ImageSource ()
	~ImageSource () override=default
void	ClassicMultiThread (ThreadFunctionType callbackFunction)
virtual void	ThreadedGenerateData (const OutputImageRegionType &region, ThreadIdType threadId)
virtual void	DynamicThreadedGenerateData (const OutputImageRegionType &outputRegionForThread)
virtual void	AllocateOutputs ()
virtual void	BeforeThreadedGenerateData ()
virtual void	AfterThreadedGenerateData ()
virtual const ImageRegionSplitterBase *	GetImageRegionSplitter () const
virtual unsigned int	SplitRequestedRegion (unsigned int i, unsigned int pieces, OutputImageRegionType &splitRegion)
virtual bool	GetDynamicMultiThreading () const
virtual void	SetDynamicMultiThreading (bool _arg)
virtual void	DynamicMultiThreadingOn ()
virtual void	DynamicMultiThreadingOff ()
Protected Member Functions inherited from itk::ProcessObject
	ProcessObject ()
	~ProcessObject () override
DataObject *	GetInput (const DataObjectIdentifierType &key)
const DataObject *	GetInput (const DataObjectIdentifierType &key) const
DataObject *	GetInput (DataObjectPointerArraySizeType idx)
const DataObject *	GetInput (DataObjectPointerArraySizeType idx) const
virtual void	SetInput (const DataObjectIdentifierType &key, DataObject *input)
virtual void	SetNthInput (DataObjectPointerArraySizeType idx, DataObject *input)
virtual void	AddInput (DataObject *input)
virtual void	RemoveInput (const DataObjectIdentifierType &key)
virtual void	RemoveInput (DataObjectPointerArraySizeType)
DataObject *	GetPrimaryInput ()
const DataObject *	GetPrimaryInput () const
virtual void	SetPrimaryInputName (const DataObjectIdentifierType &key)
virtual const char *	GetPrimaryInputName () const
virtual void	SetPrimaryInput (DataObject *object)
void	SetNumberOfIndexedInputs (DataObjectPointerArraySizeType num)
virtual void	SetNumberOfRequiredInputs (DataObjectPointerArraySizeType)
virtual const DataObjectPointerArraySizeType &	GetNumberOfRequiredInputs () const
bool	RemoveRequiredInputName (const DataObjectIdentifierType &)
bool	IsRequiredInputName (const DataObjectIdentifierType &) const
void	SetRequiredInputNames (const NameArray &)
bool	AddRequiredInputName (const DataObjectIdentifierType &)
bool	AddRequiredInputName (const DataObjectIdentifierType &, DataObjectPointerArraySizeType idx)
void	AddOptionalInputName (const DataObjectIdentifierType &)
void	AddOptionalInputName (const DataObjectIdentifierType &, DataObjectPointerArraySizeType idx)
DataObject *	GetOutput (const DataObjectIdentifierType &key)
const DataObject *	GetOutput (const DataObjectIdentifierType &key) const
virtual void	SetPrimaryOutputName (const DataObjectIdentifierType &key)
virtual const char *	GetPrimaryOutputName () const
DataObject *	GetOutput (DataObjectPointerArraySizeType i)
const DataObject *	GetOutput (DataObjectPointerArraySizeType i) const
virtual void	SetOutput (const DataObjectIdentifierType &name, DataObject *output)
virtual void	RemoveOutput (const DataObjectIdentifierType &key)
DataObject *	GetPrimaryOutput ()
const DataObject *	GetPrimaryOutput () const
virtual void	SetPrimaryOutput (DataObject *object)
virtual void	SetNthOutput (DataObjectPointerArraySizeType idx, DataObject *output)
virtual void	AddOutput (DataObject *output)
virtual void	RemoveOutput (DataObjectPointerArraySizeType idx)
virtual void	SetNumberOfRequiredOutputs (DataObjectPointerArraySizeType _arg)
virtual const DataObjectPointerArraySizeType &	GetNumberOfRequiredOutputs () const
void	SetNumberOfIndexedOutputs (DataObjectPointerArraySizeType num)
DataObjectIdentifierType	MakeNameFromInputIndex (DataObjectPointerArraySizeType idx) const
DataObjectIdentifierType	MakeNameFromOutputIndex (DataObjectPointerArraySizeType idx) const
DataObjectPointerArraySizeType	MakeIndexFromInputName (const DataObjectIdentifierType &name) const
DataObjectPointerArraySizeType	MakeIndexFromOutputName (const DataObjectIdentifierType &name) const
bool	IsIndexedInputName (const DataObjectIdentifierType &) const
bool	IsIndexedOutputName (const DataObjectIdentifierType &) const
virtual void	VerifyPreconditions () ITKv5_CONST
virtual void	GenerateOutputRequestedRegion (DataObject *output)
virtual void	PropagateResetPipeline ()
virtual void	ReleaseInputs ()
virtual void	CacheInputReleaseDataFlags ()
virtual void	RestoreInputReleaseDataFlags ()
virtual bool	GetThreaderUpdateProgress () const
virtual void	ThreaderUpdateProgressOn ()
virtual void	ThreaderUpdateProgressOff ()
virtual void	SetThreaderUpdateProgress (bool arg)
Protected Member Functions inherited from itk::Object
	Object ()
	~Object () override
bool	PrintObservers (std::ostream &os, Indent indent) const
virtual void	SetTimeStamp (const TimeStamp &timeStamp)
Protected Member Functions inherited from itk::LightObject
virtual LightObject::Pointer	InternalClone () const
	LightObject ()
virtual void	PrintHeader (std::ostream &os, Indent indent) const
virtual void	PrintTrailer (std::ostream &os, Indent indent) const
virtual	~LightObject ()

Private Types
using	ComplexConjugateMultiplyType = MultiplyImageFilter< InternalComplexImageType, ConjugateAdaptorType, InternalComplexImageType >
using	ComplexMultiplyType = MultiplyImageFilter< InternalComplexImageType >
using	ConjugateAdaptorType = ComplexConjugateImageAdaptor< InternalComplexImageType >
using	DivideFilterType = DivideOrZeroOutImageFilter< InternalImageType >
using	MultiplyFilterType = MultiplyImageFilter< InternalImageType >

Private Attributes
ComplexMultiplyType::Pointer	m_ComplexMultiplyFilter1
ComplexConjugateMultiplyType::Pointer	m_ComplexMultiplyFilter2
ConjugateAdaptorType::Pointer	m_ConjugateAdaptor
DivideFilterType::Pointer	m_DivideFilter
FFTFilterType::Pointer	m_FFTFilter
IFFTFilterType::Pointer	m_IFFTFilter1
IFFTFilterType::Pointer	m_IFFTFilter2
MultiplyFilterType::Pointer	m_MultiplyFilter
InternalImagePointerType	m_PaddedInput

Additional Inherited Members
Static Public Attributes inherited from itk::FFTConvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >
static constexpr unsigned int	ImageDimension = TInputImage::ImageDimension
Static Public Attributes inherited from itk::ConvolutionImageFilterBase< TInputImage, TKernelImage, TOutputImage >
static constexpr unsigned int	ImageDimension = TInputImage::ImageDimension
Static Public Attributes inherited from itk::ImageToImageFilter< TInputImage, TOutputImage >
static constexpr unsigned int	InputImageDimension = TInputImage::ImageDimension
static constexpr unsigned int	OutputImageDimension = TOutputImage::ImageDimension
Static Public Attributes inherited from itk::ImageSource< TOutputImage >
static constexpr unsigned int	OutputImageDimension = TOutputImage::ImageDimension
Static Protected Member Functions inherited from itk::ImageSource< TOutputImage >
static const ImageRegionSplitterBase *	GetGlobalDefaultSplitter ()
static ITK_THREAD_RETURN_FUNCTION_CALL_CONVENTION	ThreaderCallback (void *arg)
Static Protected Member Functions inherited from itk::ProcessObject
static constexpr float	progressFixedToFloat (uint32_t fixed)
static uint32_t	progressFloatToFixed (float f)
Protected Attributes inherited from itk::IterativeDeconvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >
InternalComplexImagePointerType	m_TransferFunction
InternalImagePointerType	m_CurrentEstimate
Protected Attributes inherited from itk::ImageSource< TOutputImage >
bool	m_DynamicMultiThreading
Protected Attributes inherited from itk::ProcessObject
bool	m_Updating
TimeStamp	m_OutputInformationMTime
Protected Attributes inherited from itk::LightObject
std::atomic< int >	m_ReferenceCount

Detailed Description

template<typename TInputImage, typename TKernelImage = TInputImage, typename TOutputImage = TInputImage, typename TInternalPrecision = double>
class itk::RichardsonLucyDeconvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >

Deconvolve an image using the Richardson-Lucy deconvolution algorithm.

This filter implements the Richardson-Lucy deconvolution algorithm as defined in Bertero M and Boccacci P, "Introduction to Inverse Problems in Imaging", 1998. The algorithm assumes that the input image has been formed by a linear shift-invariant system with a known kernel.

The Richardson-Lucy algorithm assumes that noise in the image follows a Poisson distribution and that the distribution for each pixel is independent of the other pixels.

This code was adapted from the Insight Journal contribution:

"Deconvolution: infrastructure and reference algorithms" by Gaetan Lehmann https://www.insight-journal.org/browse/publication/753

Author

Gaetan Lehmann, Biologie du Developpement et de la Reproduction, INRA de Jouy-en-Josas, France

Cory Quammen, The University of North Carolina at Chapel Hill

See also

IterativeDeconvolutionImageFilter

LandweberDeconvolutionImageFilter

ProjectedLandweberDeconvolutionImageFilter

Definition at line 63 of file itkRichardsonLucyDeconvolutionImageFilter.h.

Member Typedef Documentation

ComplexConjugateMultiplyType

template<typename TInputImage , typename TKernelImage = TInputImage, typename TOutputImage = TInputImage, typename TInternalPrecision = double>

using itk::RichardsonLucyDeconvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >::ComplexConjugateMultiplyType = MultiplyImageFilter<InternalComplexImageType, ConjugateAdaptorType, InternalComplexImageType>

private

Definition at line 119 of file itkRichardsonLucyDeconvolutionImageFilter.h.

ComplexMultiplyType

template<typename TInputImage , typename TKernelImage = TInputImage, typename TOutputImage = TInputImage, typename TInternalPrecision = double>

using itk::RichardsonLucyDeconvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >::ComplexMultiplyType = MultiplyImageFilter<InternalComplexImageType>

private

Definition at line 115 of file itkRichardsonLucyDeconvolutionImageFilter.h.

ConjugateAdaptorType

template<typename TInputImage , typename TKernelImage = TInputImage, typename TOutputImage = TInputImage, typename TInternalPrecision = double>

using itk::RichardsonLucyDeconvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >::ConjugateAdaptorType = ComplexConjugateImageAdaptor<InternalComplexImageType>

private

Definition at line 117 of file itkRichardsonLucyDeconvolutionImageFilter.h.

ConstPointer

template<typename TInputImage , typename TKernelImage = TInputImage, typename TOutputImage = TInputImage, typename TInternalPrecision = double>

using itk::RichardsonLucyDeconvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >::ConstPointer = SmartPointer<const Self>

Definition at line 73 of file itkRichardsonLucyDeconvolutionImageFilter.h.

DivideFilterType

template<typename TInputImage , typename TKernelImage = TInputImage, typename TOutputImage = TInputImage, typename TInternalPrecision = double>

using itk::RichardsonLucyDeconvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >::DivideFilterType = DivideOrZeroOutImageFilter<InternalImageType>

private

Definition at line 116 of file itkRichardsonLucyDeconvolutionImageFilter.h.

FFTFilterType

template<typename TInputImage , typename TKernelImage = TInputImage, typename TOutputImage = TInputImage, typename TInternalPrecision = double>

using itk::RichardsonLucyDeconvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >::FFTFilterType = typename Superclass::FFTFilterType

protected

Definition at line 106 of file itkRichardsonLucyDeconvolutionImageFilter.h.

IFFTFilterType

template<typename TInputImage , typename TKernelImage = TInputImage, typename TOutputImage = TInputImage, typename TInternalPrecision = double>

using itk::RichardsonLucyDeconvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >::IFFTFilterType = typename Superclass::IFFTFilterType

protected

Definition at line 107 of file itkRichardsonLucyDeconvolutionImageFilter.h.

InputImageType

template<typename TInputImage , typename TKernelImage = TInputImage, typename TOutputImage = TInputImage, typename TInternalPrecision = double>

using itk::RichardsonLucyDeconvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >::InputImageType = TInputImage

Other useful type alias.

Definition at line 76 of file itkRichardsonLucyDeconvolutionImageFilter.h.

InternalComplexImagePointerType

template<typename TInputImage , typename TKernelImage = TInputImage, typename TOutputImage = TInputImage, typename TInternalPrecision = double>

using itk::RichardsonLucyDeconvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >::InternalComplexImagePointerType = typename Superclass::InternalComplexImagePointerType

Definition at line 85 of file itkRichardsonLucyDeconvolutionImageFilter.h.

InternalComplexImageType

template<typename TInputImage , typename TKernelImage = TInputImage, typename TOutputImage = TInputImage, typename TInternalPrecision = double>

using itk::RichardsonLucyDeconvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >::InternalComplexImageType = typename Superclass::InternalComplexImageType

Definition at line 84 of file itkRichardsonLucyDeconvolutionImageFilter.h.

InternalComplexType

template<typename TInputImage , typename TKernelImage = TInputImage, typename TOutputImage = TInputImage, typename TInternalPrecision = double>

using itk::RichardsonLucyDeconvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >::InternalComplexType = typename Superclass::InternalComplexType

Definition at line 83 of file itkRichardsonLucyDeconvolutionImageFilter.h.

InternalImagePointerType

template<typename TInputImage , typename TKernelImage = TInputImage, typename TOutputImage = TInputImage, typename TInternalPrecision = double>

using itk::RichardsonLucyDeconvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >::InternalImagePointerType = typename Superclass::InternalImagePointerType

Definition at line 82 of file itkRichardsonLucyDeconvolutionImageFilter.h.

InternalImageType

template<typename TInputImage , typename TKernelImage = TInputImage, typename TOutputImage = TInputImage, typename TInternalPrecision = double>

using itk::RichardsonLucyDeconvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >::InternalImageType = typename Superclass::InternalImageType

Internal types used by the FFT filters.

Definition at line 81 of file itkRichardsonLucyDeconvolutionImageFilter.h.

KernelImageType

template<typename TInputImage , typename TKernelImage = TInputImage, typename TOutputImage = TInputImage, typename TInternalPrecision = double>

using itk::RichardsonLucyDeconvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >::KernelImageType = TKernelImage

Definition at line 77 of file itkRichardsonLucyDeconvolutionImageFilter.h.

MultiplyFilterType

template<typename TInputImage , typename TKernelImage = TInputImage, typename TOutputImage = TInputImage, typename TInternalPrecision = double>

using itk::RichardsonLucyDeconvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >::MultiplyFilterType = MultiplyImageFilter<InternalImageType>

private

Filters to compute each iterative update step.

Definition at line 114 of file itkRichardsonLucyDeconvolutionImageFilter.h.

OutputImageType

template<typename TInputImage , typename TKernelImage = TInputImage, typename TOutputImage = TInputImage, typename TInternalPrecision = double>

using itk::RichardsonLucyDeconvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >::OutputImageType = TOutputImage

Definition at line 78 of file itkRichardsonLucyDeconvolutionImageFilter.h.

Pointer

template<typename TInputImage , typename TKernelImage = TInputImage, typename TOutputImage = TInputImage, typename TInternalPrecision = double>

using itk::RichardsonLucyDeconvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >::Pointer = SmartPointer<Self>

Definition at line 72 of file itkRichardsonLucyDeconvolutionImageFilter.h.

Self

template<typename TInputImage , typename TKernelImage = TInputImage, typename TOutputImage = TInputImage, typename TInternalPrecision = double>

using itk::RichardsonLucyDeconvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >::Self = RichardsonLucyDeconvolutionImageFilter

Standard type alias.

Definition at line 70 of file itkRichardsonLucyDeconvolutionImageFilter.h.

Superclass

template<typename TInputImage , typename TKernelImage = TInputImage, typename TOutputImage = TInputImage, typename TInternalPrecision = double>

using itk::RichardsonLucyDeconvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >::Superclass = IterativeDeconvolutionImageFilter<TInputImage, TKernelImage, TOutputImage, TInternalPrecision>

Definition at line 71 of file itkRichardsonLucyDeconvolutionImageFilter.h.

Constructor & Destructor Documentation

RichardsonLucyDeconvolutionImageFilter()

template<typename TInputImage , typename TKernelImage = TInputImage, typename TOutputImage = TInputImage, typename TInternalPrecision = double>

itk::RichardsonLucyDeconvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >::RichardsonLucyDeconvolutionImageFilter ( )

protected

~RichardsonLucyDeconvolutionImageFilter()

template<typename TInputImage , typename TKernelImage = TInputImage, typename TOutputImage = TInputImage, typename TInternalPrecision = double>

itk::RichardsonLucyDeconvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >::~RichardsonLucyDeconvolutionImageFilter ( )

overrideprotected

Member Function Documentation

CreateAnother()

template<typename TInputImage , typename TKernelImage = TInputImage, typename TOutputImage = TInputImage, typename TInternalPrecision = double>

virtual::itk::LightObject::Pointer itk::RichardsonLucyDeconvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >::CreateAnother ( ) const

virtual

Create an object from an instance, potentially deferring to a factory. This method allows you to create an instance of an object that is exactly the same type as the referring object. This is useful in cases where an object has been cast back to a base class.

Reimplemented from itk::FFTConvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >.

Finish()

template<typename TInputImage , typename TKernelImage = TInputImage, typename TOutputImage = TInputImage, typename TInternalPrecision = double>

void itk::RichardsonLucyDeconvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >::Finish ( ProgressAccumulator *  progress, float  progressWeight  )

overrideprotectedvirtual

Runs after iterating.

Reimplemented from itk::IterativeDeconvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >.

GetNameOfClass()

template<typename TInputImage , typename TKernelImage = TInputImage, typename TOutputImage = TInputImage, typename TInternalPrecision = double>

virtual const char* itk::RichardsonLucyDeconvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >::GetNameOfClass ( ) const

virtual

Runtime information support.

Reimplemented from itk::IterativeDeconvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >.

Initialize()

template<typename TInputImage , typename TKernelImage = TInputImage, typename TOutputImage = TInputImage, typename TInternalPrecision = double>

void itk::RichardsonLucyDeconvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >::Initialize ( ProgressAccumulator *  progress, float  progressWeight, float  iterationProgressWeight  )

overrideprotectedvirtual

Runs before iterating .

Reimplemented from itk::IterativeDeconvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >.

Iteration()

template<typename TInputImage , typename TKernelImage = TInputImage, typename TOutputImage = TInputImage, typename TInternalPrecision = double>

void itk::RichardsonLucyDeconvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >::Iteration ( ProgressAccumulator *  , float    )

overrideprotectedvirtual

Performs an iteration.

Implements itk::IterativeDeconvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >.

New()

template<typename TInputImage , typename TKernelImage = TInputImage, typename TOutputImage = TInputImage, typename TInternalPrecision = double>

static Pointer itk::RichardsonLucyDeconvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >::New ( )

static

Method for creation through the object factory.

PrintSelf()

template<typename TInputImage , typename TKernelImage = TInputImage, typename TOutputImage = TInputImage, typename TInternalPrecision = double>

void itk::RichardsonLucyDeconvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >::PrintSelf ( std::ostream &  os, Indent  indent  ) const

overrideprotectedvirtual

Discrete Fourier transform of the padded kernel.

Reimplemented from itk::IterativeDeconvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >.

Member Data Documentation

m_ComplexMultiplyFilter1

template<typename TInputImage , typename TKernelImage = TInputImage, typename TOutputImage = TInputImage, typename TInternalPrecision = double>

ComplexMultiplyType::Pointer itk::RichardsonLucyDeconvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >::m_ComplexMultiplyFilter1

private

Definition at line 123 of file itkRichardsonLucyDeconvolutionImageFilter.h.

m_ComplexMultiplyFilter2

template<typename TInputImage , typename TKernelImage = TInputImage, typename TOutputImage = TInputImage, typename TInternalPrecision = double>

ComplexConjugateMultiplyType::Pointer itk::RichardsonLucyDeconvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >::m_ComplexMultiplyFilter2

private

Definition at line 128 of file itkRichardsonLucyDeconvolutionImageFilter.h.

m_ConjugateAdaptor

template<typename TInputImage , typename TKernelImage = TInputImage, typename TOutputImage = TInputImage, typename TInternalPrecision = double>

ConjugateAdaptorType::Pointer itk::RichardsonLucyDeconvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >::m_ConjugateAdaptor

private

Definition at line 127 of file itkRichardsonLucyDeconvolutionImageFilter.h.

m_DivideFilter

template<typename TInputImage , typename TKernelImage = TInputImage, typename TOutputImage = TInputImage, typename TInternalPrecision = double>

DivideFilterType::Pointer itk::RichardsonLucyDeconvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >::m_DivideFilter

private

Definition at line 125 of file itkRichardsonLucyDeconvolutionImageFilter.h.

m_FFTFilter

template<typename TInputImage , typename TKernelImage = TInputImage, typename TOutputImage = TInputImage, typename TInternalPrecision = double>

FFTFilterType::Pointer itk::RichardsonLucyDeconvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >::m_FFTFilter

private

Definition at line 126 of file itkRichardsonLucyDeconvolutionImageFilter.h.

m_IFFTFilter1

template<typename TInputImage , typename TKernelImage = TInputImage, typename TOutputImage = TInputImage, typename TInternalPrecision = double>

IFFTFilterType::Pointer itk::RichardsonLucyDeconvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >::m_IFFTFilter1

private

Definition at line 124 of file itkRichardsonLucyDeconvolutionImageFilter.h.

m_IFFTFilter2

template<typename TInputImage , typename TKernelImage = TInputImage, typename TOutputImage = TInputImage, typename TInternalPrecision = double>

IFFTFilterType::Pointer itk::RichardsonLucyDeconvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >::m_IFFTFilter2

private

Definition at line 129 of file itkRichardsonLucyDeconvolutionImageFilter.h.

m_MultiplyFilter

template<typename TInputImage , typename TKernelImage = TInputImage, typename TOutputImage = TInputImage, typename TInternalPrecision = double>

MultiplyFilterType::Pointer itk::RichardsonLucyDeconvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >::m_MultiplyFilter

private

Definition at line 130 of file itkRichardsonLucyDeconvolutionImageFilter.h.

m_PaddedInput

template<typename TInputImage , typename TKernelImage = TInputImage, typename TOutputImage = TInputImage, typename TInternalPrecision = double>

InternalImagePointerType itk::RichardsonLucyDeconvolutionImageFilter< TInputImage, TKernelImage, TOutputImage, TInternalPrecision >::m_PaddedInput

private

Definition at line 121 of file itkRichardsonLucyDeconvolutionImageFilter.h.

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The documentation for this class was generated from the following file:

• itkRichardsonLucyDeconvolutionImageFilter.h