itk::Statistics::ImageToListSampleAdaptor< TImage > Class Template Reference

#include <itkImageToListSampleAdaptor.h>

Inheritance diagram for itk::Statistics::ImageToListSampleAdaptor< TImage >:

Collaboration diagram for itk::Statistics::ImageToListSampleAdaptor< TImage >:

Classes
class	ConstIterator
class	Iterator

Public Types
using	AbsoluteFrequencyType = typename Superclass::AbsoluteFrequencyType
using	ConstPointer = SmartPointer< const Self >
using	ImageConstIteratorType = ImageRegionConstIterator< ImageType >
using	ImageConstPointer = typename ImageType::ConstPointer
using	ImageIteratorType = ImageRegionIterator< ImageType >
using	ImagePointer = typename ImageType::Pointer
using	ImageType = TImage
using	IndexType = typename ImageType::IndexType
using	InstanceIdentifier = typename Superclass::InstanceIdentifier
using	MeasurementPixelTraitsType = MeasurementVectorPixelTraits< PixelType >
using	MeasurementType = typename MeasurementVectorTraitsType::ValueType
using	MeasurementVectorSizeType = typename Superclass::MeasurementVectorSizeType
using	MeasurementVectorTraitsType = MeasurementVectorTraitsTypes< MeasurementVectorType >
using	MeasurementVectorType = typename MeasurementPixelTraitsType::MeasurementVectorType
using	PixelContainerConstPointer = typename ImageType::PixelContainerConstPointer
using	PixelTraitsType = PixelTraits< typename TImage::PixelType >
using	PixelType = typename ImageType::PixelType
using	Pointer = SmartPointer< Self >
using	Self = ImageToListSampleAdaptor
using	Superclass = ListSample< typename MeasurementVectorPixelTraits< typename TImage::PixelType >::MeasurementVectorType >
using	TotalAbsoluteFrequencyType = typename Superclass::TotalAbsoluteFrequencyType
using	ValueType = MeasurementVectorType
Public Types inherited from itk::Statistics::ListSample< MeasurementVectorPixelTraits< TImage::PixelType >::MeasurementVectorType >
using	AbsoluteFrequencyType = typename Superclass::AbsoluteFrequencyType
using	ConstPointer = SmartPointer< const Self >
using	InstanceIdentifier = typename Superclass::InstanceIdentifier
using	InternalDataContainerType = std::vector< MeasurementVectorType >
using	MeasurementType = typename Superclass::MeasurementType
using	MeasurementVectorSizeType = typename Superclass::MeasurementVectorSizeType
using	MeasurementVectorType = typename Superclass::MeasurementVectorType
using	Pointer = SmartPointer< Self >
using	Self = ListSample
using	Superclass = Sample< MeasurementVectorPixelTraits< TImage::PixelType >::MeasurementVectorType >
using	TotalAbsoluteFrequencyType = typename Superclass::TotalAbsoluteFrequencyType
using	ValueType = MeasurementVectorType
Public Types inherited from itk::Statistics::Sample< MeasurementVectorPixelTraits< TImage::PixelType >::MeasurementVectorType >
using	AbsoluteFrequencyType = MeasurementVectorTraits::AbsoluteFrequencyType
using	ConstPointer = SmartPointer< const Self >
using	InstanceIdentifier = typename MeasurementVectorTraits::InstanceIdentifier
using	MeasurementType = typename MeasurementVectorTraitsTypes< MeasurementVectorType >::ValueType
using	MeasurementVectorSizeType = unsigned int
using	MeasurementVectorType = MeasurementVectorPixelTraits< TImage::PixelType >::MeasurementVectorType
using	Pointer = SmartPointer< Self >
using	Self = Sample
using	Superclass = DataObject
using	TotalAbsoluteFrequencyType = NumericTraits< AbsoluteFrequencyType >::AccumulateType
Public Types inherited from itk::DataObject
using	ConstPointer = SmartPointer< const Self >
using	DataObjectIdentifierType = std::string
using	DataObjectPointerArraySizeType = std::vector< Pointer >::size_type
using	Pointer = SmartPointer< Self >
using	Self = DataObject
using	Superclass = Object
Public Types inherited from itk::Object
using	ConstPointer = SmartPointer< const Self >
using	Pointer = SmartPointer< Self >
using	Self = Object
using	Superclass = LightObject
Public Types inherited from itk::LightObject
using	ConstPointer = SmartPointer< const Self >
using	Pointer = SmartPointer< Self >
using	Self = LightObject

Public Member Functions
virtual ::itk::LightObject::Pointer	CreateAnother () const
AbsoluteFrequencyType	GetFrequency (InstanceIdentifier id) const override
const TImage *	GetImage () const
const MeasurementVectorType &	GetMeasurementVector (InstanceIdentifier id) const override
MeasurementVectorSizeType	GetMeasurementVectorSize () const override
virtual const char *	GetNameOfClass () const
TotalAbsoluteFrequencyType	GetTotalFrequency () const override
void	SetImage (const TImage *image)
InstanceIdentifier	Size () const override
Public Member Functions inherited from itk::Statistics::ListSample< MeasurementVectorPixelTraits< TImage::PixelType >::MeasurementVectorType >
Iterator	Begin ()
ConstIterator	Begin () const
void	Clear ()
virtual ::itk::LightObject::Pointer	CreateAnother () const
Iterator	End ()
ConstIterator	End () const
AbsoluteFrequencyType	GetFrequency (InstanceIdentifier instanceId) const override
const MeasurementVectorType &	GetMeasurementVector (InstanceIdentifier instanceId) const override
TotalAbsoluteFrequencyType	GetTotalFrequency () const override
void	Graft (const DataObject *thatObject) override
void	PushBack (const MeasurementVectorType &mv)
void	Resize (InstanceIdentifier newsize)
void	SetMeasurement (InstanceIdentifier instanceId, unsigned int dim, const MeasurementType &value)
void	SetMeasurementVector (InstanceIdentifier instanceId, const MeasurementVectorType &mv)
InstanceIdentifier	Size () const override
Public Member Functions inherited from itk::Statistics::Sample< MeasurementVectorPixelTraits< TImage::PixelType >::MeasurementVectorType >
virtual AbsoluteFrequencyType	GetFrequency (InstanceIdentifier id) const=0
virtual const MeasurementVectorType &	GetMeasurementVector (InstanceIdentifier id) const=0
void	Graft (const DataObject *thatObject) override
virtual void	SetMeasurementVectorSize (MeasurementVectorSizeType s)
Public Member Functions inherited from itk::DataObject
void	DisconnectPipeline ()
bool	GetDataReleased () const
virtual const bool &	GetReleaseDataFlag () const
SmartPointer< ProcessObject >	GetSource () const
DataObjectPointerArraySizeType	GetSourceOutputIndex () const
const DataObjectIdentifierType &	GetSourceOutputName () const
virtual void	Initialize ()
virtual void	PropagateRequestedRegion ()
void	ReleaseData ()
virtual void	ReleaseDataFlagOff ()
virtual void	ReleaseDataFlagOn ()
virtual void	ResetPipeline ()
void	SetReleaseDataFlag (bool flag)
bool	ShouldIReleaseData () const
virtual void	Update ()
virtual void	UpdateOutputData ()
virtual void	UpdateOutputInformation ()
void	SetPipelineMTime (ModifiedTimeType time)
virtual const ModifiedTimeType &	GetPipelineMTime () const
virtual ModifiedTimeType	GetUpdateMTime () const
virtual void	SetRealTimeStamp (RealTimeStamp _arg)
virtual const RealTimeStamp &	GetRealTimeStamp () const
virtual void	PrepareForNewData ()
virtual void	DataHasBeenGenerated ()
virtual void	SetRequestedRegionToLargestPossibleRegion ()
virtual bool	RequestedRegionIsOutsideOfTheBufferedRegion ()
virtual bool	VerifyRequestedRegion ()
virtual void	CopyInformation (const DataObject *)
virtual void	SetRequestedRegion (const DataObject *)
Public Member Functions inherited from itk::Object
unsigned long	AddObserver (const EventObject &event, Command *)
unsigned long	AddObserver (const EventObject &event, Command *) const
unsigned long	AddObserver (const EventObject &event, std::function< void(const EventObject &)> function) const
virtual void	DebugOff () const
virtual void	DebugOn () const
Command *	GetCommand (unsigned long tag)
bool	GetDebug () const
MetaDataDictionary &	GetMetaDataDictionary ()
const MetaDataDictionary &	GetMetaDataDictionary () const
virtual ModifiedTimeType	GetMTime () const
virtual const TimeStamp &	GetTimeStamp () const
bool	HasObserver (const EventObject &event) const
void	InvokeEvent (const EventObject &)
void	InvokeEvent (const EventObject &) const
virtual void	Modified () const
void	Register () const override
void	RemoveAllObservers ()
void	RemoveObserver (unsigned long tag)
void	SetDebug (bool debugFlag) const
void	SetReferenceCount (int) override
void	UnRegister () const noexcept override
void	SetMetaDataDictionary (const MetaDataDictionary &rhs)
void	SetMetaDataDictionary (MetaDataDictionary &&rrhs)
virtual void	SetObjectName (std::string _arg)
virtual const std::string &	GetObjectName () const
Public Member Functions inherited from itk::LightObject
Pointer	Clone () const
virtual void	Delete ()
virtual int	GetReferenceCount () const
void	Print (std::ostream &os, Indent indent=0) const

Static Public Member Functions
static Pointer	New ()
Static Public Member Functions inherited from itk::Statistics::ListSample< MeasurementVectorPixelTraits< TImage::PixelType >::MeasurementVectorType >
static Pointer	New ()
Static Public Member Functions inherited from itk::DataObject
static bool	GetGlobalReleaseDataFlag ()
static void	GlobalReleaseDataFlagOff ()
static void	GlobalReleaseDataFlagOn ()
static Pointer	New ()
static void	SetGlobalReleaseDataFlag (bool val)
Static Public Member Functions inherited from itk::Object
static bool	GetGlobalWarningDisplay ()
static void	GlobalWarningDisplayOff ()
static void	GlobalWarningDisplayOn ()
static Pointer	New ()
static void	SetGlobalWarningDisplay (bool val)
Static Public Member Functions inherited from itk::LightObject
static void	BreakOnError ()
static Pointer	New ()
ImageConstPointer	m_Image
MeasurementVectorType	m_MeasurementVectorInternal
Iterator	Begin ()
Iterator	End ()
ConstIterator	Begin () const
ConstIterator	End () const
	ImageToListSampleAdaptor ()
	~ImageToListSampleAdaptor () override=default
void	PrintSelf (std::ostream &os, Indent indent) const override

Additional Inherited Members
Protected Member Functions inherited from itk::Statistics::ListSample< MeasurementVectorPixelTraits< TImage::PixelType >::MeasurementVectorType >
	ListSample ()=default
void	PrintSelf (std::ostream &os, Indent indent) const override
	~ListSample () override=default
Protected Member Functions inherited from itk::Statistics::Sample< MeasurementVectorPixelTraits< TImage::PixelType >::MeasurementVectorType >
void	PrintSelf (std::ostream &os, Indent indent) const override
	Sample ()
	~Sample () override=default
Protected Member Functions inherited from itk::DataObject
	DataObject ()
	~DataObject () override
virtual void	PropagateResetPipeline ()
Protected Member Functions inherited from itk::Object
	Object ()
	~Object () override
bool	PrintObservers (std::ostream &os, Indent indent) const
virtual void	SetTimeStamp (const TimeStamp &timeStamp)
Protected Member Functions inherited from itk::LightObject
virtual LightObject::Pointer	InternalClone () const
	LightObject ()
virtual void	PrintHeader (std::ostream &os, Indent indent) const
virtual void	PrintTrailer (std::ostream &os, Indent indent) const
virtual	~LightObject ()
Protected Attributes inherited from itk::LightObject
std::atomic< int >	m_ReferenceCount

Detailed Description

template<typename TImage>
class itk::Statistics::ImageToListSampleAdaptor< TImage >

This class provides ListSample interface to ITK Image.

After calling SetImage( const Image * ) method to plug in the image object, users can use Sample interfaces to access Image data. The resulting data are a list of measurement vectors.

The measurement vector type is determined from the image pixel type. This class handles images with scalar, fixed array or variable length vector pixel types.

See also

Sample, ListSample

ITK Sphinx Examples:

• All ITK Sphinx Examples

• Create List Of Samples From Image Without Duplication

Examples

Examples/Statistics/ImageHistogram1.cxx, Examples/Statistics/ImageToListSampleAdaptor.cxx, Examples/Statistics/ScalarImageKmeansModelEstimator.cxx, SphinxExamples/src/Numerics/Statistics/CreateListOfSamplesFromImageWithoutDuplication/Code.cxx, and SphinxExamples/src/Segmentation/Classifiers/KMeansClusterOfPixelsInImage/Code.cxx.

Definition at line 54 of file itkImageToListSampleAdaptor.h.

Member Typedef Documentation

AbsoluteFrequencyType

template<typename TImage >

using itk::Statistics::ImageToListSampleAdaptor< TImage >::AbsoluteFrequencyType = typename Superclass::AbsoluteFrequencyType

Definition at line 97 of file itkImageToListSampleAdaptor.h.

ConstPointer

template<typename TImage >

using itk::Statistics::ImageToListSampleAdaptor< TImage >::ConstPointer = SmartPointer<const Self>

Definition at line 67 of file itkImageToListSampleAdaptor.h.

ImageConstIteratorType

template<typename TImage >

using itk::Statistics::ImageToListSampleAdaptor< TImage >::ImageConstIteratorType = ImageRegionConstIterator<ImageType>

Definition at line 85 of file itkImageToListSampleAdaptor.h.

ImageConstPointer

template<typename TImage >

using itk::Statistics::ImageToListSampleAdaptor< TImage >::ImageConstPointer = typename ImageType::ConstPointer

Definition at line 78 of file itkImageToListSampleAdaptor.h.

ImageIteratorType

template<typename TImage >

using itk::Statistics::ImageToListSampleAdaptor< TImage >::ImageIteratorType = ImageRegionIterator<ImageType>

Image Iterator type alias support

Definition at line 84 of file itkImageToListSampleAdaptor.h.

ImagePointer

template<typename TImage >

using itk::Statistics::ImageToListSampleAdaptor< TImage >::ImagePointer = typename ImageType::Pointer

Definition at line 77 of file itkImageToListSampleAdaptor.h.

ImageType

template<typename TImage >

using itk::Statistics::ImageToListSampleAdaptor< TImage >::ImageType = TImage

Image type alias

Definition at line 76 of file itkImageToListSampleAdaptor.h.

IndexType

template<typename TImage >

using itk::Statistics::ImageToListSampleAdaptor< TImage >::IndexType = typename ImageType::IndexType

Definition at line 79 of file itkImageToListSampleAdaptor.h.

InstanceIdentifier

template<typename TImage >

using itk::Statistics::ImageToListSampleAdaptor< TImage >::InstanceIdentifier = typename Superclass::InstanceIdentifier

Definition at line 100 of file itkImageToListSampleAdaptor.h.

MeasurementPixelTraitsType

template<typename TImage >

using itk::Statistics::ImageToListSampleAdaptor< TImage >::MeasurementPixelTraitsType = MeasurementVectorPixelTraits<PixelType>

Superclass type alias for Measurement vector, measurement, Instance Identifier, frequency, size, size element value

Definition at line 91 of file itkImageToListSampleAdaptor.h.

MeasurementType

template<typename TImage >

using itk::Statistics::ImageToListSampleAdaptor< TImage >::MeasurementType = typename MeasurementVectorTraitsType::ValueType

Definition at line 95 of file itkImageToListSampleAdaptor.h.

MeasurementVectorSizeType

template<typename TImage >

using itk::Statistics::ImageToListSampleAdaptor< TImage >::MeasurementVectorSizeType = typename Superclass::MeasurementVectorSizeType

Definition at line 99 of file itkImageToListSampleAdaptor.h.

MeasurementVectorTraitsType

template<typename TImage >

using itk::Statistics::ImageToListSampleAdaptor< TImage >::MeasurementVectorTraitsType = MeasurementVectorTraitsTypes<MeasurementVectorType>

Definition at line 94 of file itkImageToListSampleAdaptor.h.

MeasurementVectorType

template<typename TImage >

using itk::Statistics::ImageToListSampleAdaptor< TImage >::MeasurementVectorType = typename MeasurementPixelTraitsType::MeasurementVectorType

Definition at line 92 of file itkImageToListSampleAdaptor.h.

PixelContainerConstPointer

template<typename TImage >

using itk::Statistics::ImageToListSampleAdaptor< TImage >::PixelContainerConstPointer = typename ImageType::PixelContainerConstPointer

Definition at line 81 of file itkImageToListSampleAdaptor.h.

PixelTraitsType

template<typename TImage >

using itk::Statistics::ImageToListSampleAdaptor< TImage >::PixelTraitsType = PixelTraits<typename TImage::PixelType>

Definition at line 86 of file itkImageToListSampleAdaptor.h.

PixelType

template<typename TImage >

using itk::Statistics::ImageToListSampleAdaptor< TImage >::PixelType = typename ImageType::PixelType

Definition at line 80 of file itkImageToListSampleAdaptor.h.

Pointer

template<typename TImage >

using itk::Statistics::ImageToListSampleAdaptor< TImage >::Pointer = SmartPointer<Self>

Definition at line 66 of file itkImageToListSampleAdaptor.h.

Self

template<typename TImage >

using itk::Statistics::ImageToListSampleAdaptor< TImage >::Self = ImageToListSampleAdaptor

Standard class type aliases

Definition at line 61 of file itkImageToListSampleAdaptor.h.

Superclass

template<typename TImage >

using itk::Statistics::ImageToListSampleAdaptor< TImage >::Superclass = ListSample<typename MeasurementVectorPixelTraits<typename TImage::PixelType>::MeasurementVectorType>

Definition at line 64 of file itkImageToListSampleAdaptor.h.

TotalAbsoluteFrequencyType

template<typename TImage >

using itk::Statistics::ImageToListSampleAdaptor< TImage >::TotalAbsoluteFrequencyType = typename Superclass::TotalAbsoluteFrequencyType

Definition at line 98 of file itkImageToListSampleAdaptor.h.

ValueType

template<typename TImage >

using itk::Statistics::ImageToListSampleAdaptor< TImage >::ValueType = MeasurementVectorType

Definition at line 102 of file itkImageToListSampleAdaptor.h.

Constructor & Destructor Documentation

ImageToListSampleAdaptor()

template<typename TImage >

itk::Statistics::ImageToListSampleAdaptor< TImage >::ImageToListSampleAdaptor ( )

protected

returns an iterator that points to the beginning of the container

~ImageToListSampleAdaptor()

template<typename TImage >

itk::Statistics::ImageToListSampleAdaptor< TImage >::~ImageToListSampleAdaptor ( )

overrideprotecteddefault

returns an iterator that points to the beginning of the container

Member Function Documentation

Begin() [1/2]

template<typename TImage >

Iterator itk::Statistics::ImageToListSampleAdaptor< TImage >::Begin ( )

inline

returns an iterator that points to the beginning of the container

Definition at line 261 of file itkImageToListSampleAdaptor.h.

References itk::ImageRegionConstIterator< TImage >::GoToBegin().

Referenced by itk::Statistics::ImageToListSampleAdaptor< TImage >::ConstIterator::ConstIterator().

Begin() [2/2]

template<typename TImage >

ConstIterator itk::Statistics::ImageToListSampleAdaptor< TImage >::Begin ( ) const

inline

returns an iterator that points to the beginning of the container

Definition at line 287 of file itkImageToListSampleAdaptor.h.

References itk::ImageRegionConstIterator< TImage >::GoToBegin().

CreateAnother()

template<typename TImage >

virtual::itk::LightObject::Pointer itk::Statistics::ImageToListSampleAdaptor< TImage >::CreateAnother ( ) const

virtual

Create an object from an instance, potentially deferring to a factory. This method allows you to create an instance of an object that is exactly the same type as the referring object. This is useful in cases where an object has been cast back to a base class.

Reimplemented from itk::Object.

End() [1/2]

template<typename TImage >

Iterator itk::Statistics::ImageToListSampleAdaptor< TImage >::End ( )

inline

returns an iterator that points to the end of the container

Definition at line 273 of file itkImageToListSampleAdaptor.h.

References itk::ImageRegionConstIterator< TImage >::GoToEnd().

End() [2/2]

template<typename TImage >

ConstIterator itk::Statistics::ImageToListSampleAdaptor< TImage >::End ( ) const

inline

returns an iterator that points to the end of the container

Definition at line 299 of file itkImageToListSampleAdaptor.h.

References itk::ImageRegionConstIterator< TImage >::GoToEnd().

GetFrequency()

template<typename TImage >

AbsoluteFrequencyType itk::Statistics::ImageToListSampleAdaptor< TImage >::GetFrequency ( InstanceIdentifier  id ) const

override

method to return frequency for a specified id

GetImage()

template<typename TImage >

const TImage* itk::Statistics::ImageToListSampleAdaptor< TImage >::GetImage

(

)

const

Method to get the image

GetMeasurementVector()

template<typename TImage >

const MeasurementVectorType& itk::Statistics::ImageToListSampleAdaptor< TImage >::GetMeasurementVector ( InstanceIdentifier  id ) const

override

method to return measurement vector for a specified id

GetMeasurementVectorSize()

template<typename TImage >

MeasurementVectorSizeType itk::Statistics::ImageToListSampleAdaptor< TImage >::GetMeasurementVectorSize ( ) const

inlineoverridevirtual

Get method for the length of the measurement vector

Reimplemented from itk::Statistics::Sample< MeasurementVectorPixelTraits< TImage::PixelType >::MeasurementVectorType >.

Definition at line 121 of file itkImageToListSampleAdaptor.h.

GetNameOfClass()

template<typename TImage >

virtual const char* itk::Statistics::ImageToListSampleAdaptor< TImage >::GetNameOfClass ( ) const

virtual

Run-time type information (and related methods).

Reimplemented from itk::Statistics::ListSample< MeasurementVectorPixelTraits< TImage::PixelType >::MeasurementVectorType >.

GetTotalFrequency()

template<typename TImage >

TotalAbsoluteFrequencyType itk::Statistics::ImageToListSampleAdaptor< TImage >::GetTotalFrequency ( ) const

overridevirtual

method to return the total frequency

Implements itk::Statistics::Sample< MeasurementVectorPixelTraits< TImage::PixelType >::MeasurementVectorType >.

New()

template<typename TImage >

static Pointer itk::Statistics::ImageToListSampleAdaptor< TImage >::New ( )

static

Method for creation through the object factory.

PrintSelf()

template<typename TImage >

void itk::Statistics::ImageToListSampleAdaptor< TImage >::PrintSelf ( std::ostream &  os, Indent  indent  ) const

overrideprotectedvirtual

returns an iterator that points to the beginning of the container

Reimplemented from itk::DataObject.

SetImage()

template<typename TImage >

void itk::Statistics::ImageToListSampleAdaptor< TImage >::SetImage

(

const TImage *

image

)

Method to set the image

Size()

template<typename TImage >

InstanceIdentifier itk::Statistics::ImageToListSampleAdaptor< TImage >::Size ( ) const

overridevirtual

returns the number of measurement vectors in this container

Implements itk::Statistics::Sample< MeasurementVectorPixelTraits< TImage::PixelType >::MeasurementVectorType >.

Member Data Documentation

m_Image

template<typename TImage >

ImageConstPointer itk::Statistics::ImageToListSampleAdaptor< TImage >::m_Image

private

returns an iterator that points to the beginning of the container

Definition at line 317 of file itkImageToListSampleAdaptor.h.

m_MeasurementVectorInternal

template<typename TImage >

MeasurementVectorType itk::Statistics::ImageToListSampleAdaptor< TImage >::m_MeasurementVectorInternal

mutableprivate

returns an iterator that points to the beginning of the container

Definition at line 318 of file itkImageToListSampleAdaptor.h.

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The documentation for this class was generated from the following file:

• itkImageToListSampleAdaptor.h