ITK  5.2.0
Insight Toolkit
Public Types | Public Member Functions | Static Public Member Functions | List of all members
itk::VoronoiSegmentationImageFilter< TInputImage, TOutputImage, TBinaryPriorImage > Class Template Reference

#include <itkVoronoiSegmentationImageFilter.h>

+ Inheritance diagram for itk::VoronoiSegmentationImageFilter< TInputImage, TOutputImage, TBinaryPriorImage >:
+ Collaboration diagram for itk::VoronoiSegmentationImageFilter< TInputImage, TOutputImage, TBinaryPriorImage >:

Public Types

using BinaryObjectImage = typename Superclass::BinaryObjectImage
 
using ConstPointer = SmartPointer< const Self >
 
using IndexList = typename Superclass::IndexList
 
using IndexType = typename Superclass::IndexType
 
using InputImageType = typename Superclass::InputImageType
 
using Pointer = SmartPointer< Self >
 
using RegionType = typename Superclass::RegionType
 
using Self = VoronoiSegmentationImageFilter
 
using Superclass = VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >
 
- Public Types inherited from itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >
using BinaryObjectImage = TBinaryPriorImage
 
using BinaryObjectImagePointer = typename BinaryObjectImage::Pointer
 
using CellAutoPointer = typename VoronoiDiagram::CellAutoPointer
 
using CellType = typename VoronoiDiagram::CellType
 
using ConstPointer = SmartPointer< const Self >
 
using EdgeInfo = typename VoronoiDiagram::VoronoiEdge
 
using EdgeIterator = typename VoronoiDiagram::VoronoiEdgeIterator
 
using IndexList = std::vector< IndexType >
 
using IndexType = typename TInputImage::IndexType
 
using InputImageConstPointer = typename TInputImage::ConstPointer
 
using InputImagePointer = typename TInputImage::Pointer
 
using InputImageType = TInputImage
 
using NeighborIdIterator = typename VoronoiDiagram::NeighborIdIterator
 
using OutputImageType = TOutputImage
 
using OutputPixelType = typename TOutputImage::PixelType
 
using PixelType = typename TInputImage::PixelType
 
using Pointer = SmartPointer< Self >
 
using PointIdIterator = typename CellType::PointIdIterator
 
using PointType = typename VoronoiDiagram::PointType
 
using PointTypeDeque = std::deque< PointType >
 
using PointTypeVector = std::vector< PointType >
 
using RegionType = typename TInputImage::RegionType
 
using SeedsIterator = typename VoronoiDiagram::SeedsIterator
 
using SeedsType = typename VoronoiDiagram::SeedsType
 
using Self = VoronoiSegmentationImageFilterBase
 
using SizeType = typename TInputImage::SizeType
 
using Superclass = ImageToImageFilter< TInputImage, TOutputImage >
 
using VDImage = Image< unsigned char, 2 >
 
using VDImagePointer = typename VDImage::Pointer
 
using VoronoiDiagram = VoronoiDiagram2D< double >
 
using VoronoiDiagramGenerator = VoronoiDiagram2DGenerator< double >
 
using VoronoiPointer = typename VoronoiDiagram::Pointer
 
- Public Types inherited from itk::ImageToImageFilter< TInputImage, TOutputImage >
using ConstPointer = SmartPointer< const Self >
 
using InputImageConstPointer = typename InputImageType::ConstPointer
 
using InputImagePixelType = typename InputImageType::PixelType
 
using InputImagePointer = typename InputImageType::Pointer
 
using InputImageRegionType = typename InputImageType::RegionType
 
using InputImageType = TInputImage
 
using OutputImagePixelType = typename Superclass::OutputImagePixelType
 
using OutputImageRegionType = typename Superclass::OutputImageRegionType
 
using Pointer = SmartPointer< Self >
 
using Self = ImageToImageFilter
 
using Superclass = ImageSource< TOutputImage >
 
- Public Types inherited from itk::ImageSource< TOutputImage >
using ConstPointer = SmartPointer< const Self >
 
using DataObjectIdentifierType = Superclass::DataObjectIdentifierType
 
using DataObjectPointer = DataObject::Pointer
 
using DataObjectPointerArraySizeType = Superclass::DataObjectPointerArraySizeType
 
using OutputImagePixelType = typename OutputImageType::PixelType
 
using OutputImagePointer = typename OutputImageType::Pointer
 
using OutputImageRegionType = typename OutputImageType::RegionType
 
using OutputImageType = TOutputImage
 
using Pointer = SmartPointer< Self >
 
using Self = ImageSource
 
using Superclass = ProcessObject
 
- Public Types inherited from itk::ProcessObject
using ConstPointer = SmartPointer< const Self >
 
using DataObjectIdentifierType = DataObject::DataObjectIdentifierType
 
using DataObjectPointer = DataObject::Pointer
 
using DataObjectPointerArray = std::vector< DataObjectPointer >
 
using DataObjectPointerArraySizeType = DataObjectPointerArray::size_type
 
using MultiThreaderType = MultiThreaderBase
 
using NameArray = std::vector< DataObjectIdentifierType >
 
using Pointer = SmartPointer< Self >
 
using Self = ProcessObject
 
using Superclass = Object
 
- Public Types inherited from itk::Object
using ConstPointer = SmartPointer< const Self >
 
using Pointer = SmartPointer< Self >
 
using Self = Object
 
using Superclass = LightObject
 
- Public Types inherited from itk::LightObject
using ConstPointer = SmartPointer< const Self >
 
using Pointer = SmartPointer< Self >
 
using Self = LightObject
 

Public Member Functions

virtual ::itk::LightObject::Pointer CreateAnother () const
 
virtual const char * GetNameOfClass () const
 
- Public Member Functions inherited from itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >
virtual ::itk::LightObject::Pointer CreateAnother () const
 
virtual void SetNumberOfSeeds (int _arg)
 
virtual int GetNumberOfSeeds () const
 
virtual void SetMinRegion (SizeValueType _arg)
 
virtual SizeValueType GetMinRegion () const
 
virtual void SetSteps (int _arg)
 
virtual int GetSteps () const
 
virtual int GetLastStepSeeds () const
 
virtual int GetNumberOfSeedsToAdded () const
 
virtual void SetUseBackgroundInAPrior (bool _arg)
 
virtual bool GetUseBackgroundInAPrior () const
 
virtual void SetOutputBoundary (bool _arg)
 
virtual bool GetOutputBoundary () const
 
virtual void SetInteractiveSegmentation (bool _arg)
 
virtual bool GetInteractiveSegmentation () const
 
virtual void InteractiveSegmentationOn ()
 
virtual void InteractiveSegmentationOff ()
 
virtual void SetMeanDeviation (double _arg)
 
virtual double GetMeanDeviation () const
 
virtual void SetSize (SizeType _arg)
 
virtual SizeType GetSize () const
 
virtual void TakeAPrior (const BinaryObjectImage *)
 
void RunSegment ()
 
void RunSegmentOneStep ()
 
virtual void MakeSegmentBoundary ()
 
virtual void MakeSegmentObject ()
 
VoronoiPointer GetVoronoiDiagram ()
 
void SetSeeds (int num, SeedsIterator begin)
 
void SetSeeds (SeedsType &seeds)
 
PointType GetSeed (int SeedID)
 
void DrawDiagram (VDImagePointer result, unsigned char incolor, unsigned char outcolor, unsigned char boundcolor)
 
void BeforeNextStep ()
 
void GenerateInputRequestedRegion () override
 
void EnlargeOutputRequestedRegion (DataObject *output) override
 
- Public Member Functions inherited from itk::ImageToImageFilter< TInputImage, TOutputImage >
const InputImageTypeGetInput () const
 
const InputImageTypeGetInput (unsigned int idx) const
 
void PopBackInput () override
 
void PopFrontInput () override
 
virtual void PushBackInput (const InputImageType *input)
 
virtual void PushFrontInput (const InputImageType *input)
 
virtual void SetInput (const DataObjectIdentifierType &key, DataObject *input)
 
virtual void SetInput (const InputImageType *input)
 
virtual void SetInput (unsigned int, const TInputImage *image)
 
virtual void SetCoordinateTolerance (double _arg)
 
virtual double GetCoordinateTolerance () const
 
virtual void SetDirectionTolerance (double _arg)
 
virtual double GetDirectionTolerance () const
 
- Public Member Functions inherited from itk::ImageSource< TOutputImage >
OutputImageTypeGetOutput ()
 
const OutputImageTypeGetOutput () const
 
OutputImageTypeGetOutput (unsigned int idx)
 
virtual void GraftOutput (DataObject *graft)
 
virtual void GraftOutput (const DataObjectIdentifierType &key, DataObject *graft)
 
virtual void GraftNthOutput (unsigned int idx, DataObject *graft)
 
ProcessObject::DataObjectPointer MakeOutput (ProcessObject::DataObjectPointerArraySizeType idx) override
 
ProcessObject::DataObjectPointer MakeOutput (const ProcessObject::DataObjectIdentifierType &) override
 
- Public Member Functions inherited from itk::ProcessObject
virtual void AbortGenerateDataOff ()
 
virtual void AbortGenerateDataOn ()
 
virtual const bool & GetAbortGenerateData () const
 
DataObjectPointerArray GetIndexedInputs ()
 
DataObjectPointerArray GetIndexedOutputs ()
 
NameArray GetInputNames () const
 
DataObjectPointerArray GetInputs ()
 
DataObjectPointerArraySizeType GetNumberOfIndexedInputs () const
 
DataObjectPointerArraySizeType GetNumberOfIndexedOutputs () const
 
DataObjectPointerArraySizeType GetNumberOfInputs () const
 
DataObjectPointerArraySizeType GetNumberOfOutputs () const
 
virtual DataObjectPointerArraySizeType GetNumberOfValidRequiredInputs () const
 
NameArray GetOutputNames () const
 
DataObjectPointerArray GetOutputs ()
 
virtual float GetProgress () const
 
NameArray GetRequiredInputNames () const
 
bool HasInput (const DataObjectIdentifierType &key) const
 
bool HasOutput (const DataObjectIdentifierType &key) const
 
void IncrementProgress (float increment)
 
virtual void PropagateRequestedRegion (DataObject *output)
 
virtual void ResetPipeline ()
 
virtual void SetAbortGenerateData (bool _arg)
 
virtual void Update ()
 
virtual void UpdateLargestPossibleRegion ()
 
virtual void UpdateOutputData (DataObject *output)
 
virtual void UpdateOutputInformation ()
 
void UpdateProgress (float progress)
 
virtual void SetReleaseDataFlag (bool val)
 
virtual bool GetReleaseDataFlag () const
 
void ReleaseDataFlagOn ()
 
void ReleaseDataFlagOff ()
 
virtual void SetReleaseDataBeforeUpdateFlag (bool _arg)
 
virtual const bool & GetReleaseDataBeforeUpdateFlag () const
 
virtual void ReleaseDataBeforeUpdateFlagOn ()
 
virtual void ReleaseDataBeforeUpdateFlagOff ()
 
virtual void SetNumberOfWorkUnits (ThreadIdType _arg)
 
virtual const ThreadIdTypeGetNumberOfWorkUnits () const
 
MultiThreaderTypeGetMultiThreader () const
 
void SetMultiThreader (MultiThreaderType *threader)
 
virtual void PrepareOutputs ()
 
- Public Member Functions inherited from itk::Object
unsigned long AddObserver (const EventObject &event, Command *)
 
unsigned long AddObserver (const EventObject &event, Command *) const
 
unsigned long AddObserver (const EventObject &event, std::function< void(const EventObject &)> function) const
 
virtual void DebugOff () const
 
virtual void DebugOn () const
 
CommandGetCommand (unsigned long tag)
 
bool GetDebug () const
 
MetaDataDictionaryGetMetaDataDictionary ()
 
const MetaDataDictionaryGetMetaDataDictionary () const
 
virtual ModifiedTimeType GetMTime () const
 
virtual const TimeStampGetTimeStamp () const
 
bool HasObserver (const EventObject &event) const
 
void InvokeEvent (const EventObject &)
 
void InvokeEvent (const EventObject &) const
 
virtual void Modified () const
 
void Register () const override
 
void RemoveAllObservers ()
 
void RemoveObserver (unsigned long tag)
 
void SetDebug (bool debugFlag) const
 
void SetReferenceCount (int) override
 
void UnRegister () const noexcept override
 
void SetMetaDataDictionary (const MetaDataDictionary &rhs)
 
void SetMetaDataDictionary (MetaDataDictionary &&rrhs)
 
virtual void SetObjectName (std::string _arg)
 
virtual const std::string & GetObjectName () const
 
- Public Member Functions inherited from itk::LightObject
Pointer Clone () const
 
virtual void Delete ()
 
virtual int GetReferenceCount () const
 
void Print (std::ostream &os, Indent indent=0) const
 

Static Public Member Functions

static Pointer New ()
 
- Static Public Member Functions inherited from itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >
static Pointer New ()
 
- Static Public Member Functions inherited from itk::ImageToImageFilter< TInputImage, TOutputImage >
static void SetGlobalDefaultDirectionTolerance (double)
 
static double GetGlobalDefaultDirectionTolerance ()
 
static void SetGlobalDefaultCoordinateTolerance (double)
 
static double GetGlobalDefaultCoordinateTolerance ()
 
- Static Public Member Functions inherited from itk::Object
static bool GetGlobalWarningDisplay ()
 
static void GlobalWarningDisplayOff ()
 
static void GlobalWarningDisplayOn ()
 
static Pointer New ()
 
static void SetGlobalWarningDisplay (bool val)
 
- Static Public Member Functions inherited from itk::LightObject
static void BreakOnError ()
 
static Pointer New ()
 
static constexpr unsigned int InputImageDimension = TInputImage::ImageDimension
 
static constexpr unsigned int OutputImageDimension = TOutputImage::ImageDimension
 
double m_Mean { 0.0 }
 
double m_STD { 0.0 }
 
double m_MeanTolerance { 0.0 }
 
double m_STDTolerance { 0.0 }
 
double m_MeanPercentError { 0.10 }
 
double m_STDPercentError { 1.5 }
 
virtual void SetMean (double _arg)
 
virtual double GetMean () const
 
virtual void SetSTD (double _arg)
 
virtual double GetSTD () const
 
virtual void SetMeanTolerance (double _arg)
 
virtual double GetMeanTolerance () const
 
virtual void SetSTDTolerance (double _arg)
 
virtual double GetSTDTolerance () const
 
void SetMeanPercentError (double x)
 
virtual double GetMeanPercentError () const
 
virtual double GetSTDPercentError () const
 
void SetSTDPercentError (double x)
 
void TakeAPrior (const BinaryObjectImage *aprior) override
 
 VoronoiSegmentationImageFilter ()=default
 
 ~VoronoiSegmentationImageFilter () override=default
 
void PrintSelf (std::ostream &os, Indent indent) const override
 
bool TestHomogeneity (IndexList &Plist) override
 

Additional Inherited Members

- Static Public Attributes inherited from itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >
static constexpr unsigned int ImageDimension = TInputImage::ImageDimension
 
- Static Public Attributes inherited from itk::ImageToImageFilter< TInputImage, TOutputImage >
static constexpr unsigned int InputImageDimension = TInputImage::ImageDimension
 
static constexpr unsigned int OutputImageDimension = TOutputImage::ImageDimension
 
- Static Public Attributes inherited from itk::ImageSource< TOutputImage >
static constexpr unsigned int OutputImageDimension = TOutputImage::ImageDimension
 
- Protected Types inherited from itk::ImageToImageFilter< TInputImage, TOutputImage >
using InputToOutputRegionCopierType = ImageToImageFilterDetail::ImageRegionCopier< Self::OutputImageDimension, Self::InputImageDimension >
 
using OutputToInputRegionCopierType = ImageToImageFilterDetail::ImageRegionCopier< Self::InputImageDimension, Self::OutputImageDimension >
 
- Protected Member Functions inherited from itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >
 VoronoiSegmentationImageFilterBase ()
 
 ~VoronoiSegmentationImageFilterBase () override=default
 
void PrintSelf (std::ostream &os, Indent indent) const override
 
void GenerateData () override
 
virtual void ClassifyDiagram ()
 
virtual void GenerateAddingSeeds ()
 
void GetPixelIndexFromPolygon (PointTypeDeque vertlist, IndexList *PixelPool)
 
virtual bool TestHomogeneity (IndexList &)
 
void FillPolygon (PointTypeDeque vertlist, OutputPixelType color=1)
 
void drawLine (PointType p1, PointType p2)
 
void drawVDline (VDImagePointer result, PointType p1, PointType p2, unsigned char color)
 
- Protected Member Functions inherited from itk::ImageToImageFilter< TInputImage, TOutputImage >
 ImageToImageFilter ()
 
 ~ImageToImageFilter () override=default
 
void VerifyInputInformation () ITKv5_CONST override
 
virtual void CallCopyOutputRegionToInputRegion (InputImageRegionType &destRegion, const OutputImageRegionType &srcRegion)
 
virtual void CallCopyInputRegionToOutputRegion (OutputImageRegionType &destRegion, const InputImageRegionType &srcRegion)
 
void PushBackInput (const DataObject *input) override
 
void PushFrontInput (const DataObject *input) override
 
- Protected Member Functions inherited from itk::ImageSource< TOutputImage >
 ImageSource ()
 
 ~ImageSource () override=default
 
void ClassicMultiThread (ThreadFunctionType callbackFunction)
 
virtual void ThreadedGenerateData (const OutputImageRegionType &region, ThreadIdType threadId)
 
virtual void DynamicThreadedGenerateData (const OutputImageRegionType &outputRegionForThread)
 
virtual void AllocateOutputs ()
 
virtual void BeforeThreadedGenerateData ()
 
virtual void AfterThreadedGenerateData ()
 
virtual const ImageRegionSplitterBaseGetImageRegionSplitter () const
 
virtual unsigned int SplitRequestedRegion (unsigned int i, unsigned int pieces, OutputImageRegionType &splitRegion)
 
virtual bool GetDynamicMultiThreading () const
 
virtual void SetDynamicMultiThreading (bool _arg)
 
virtual void DynamicMultiThreadingOn ()
 
virtual void DynamicMultiThreadingOff ()
 
- Protected Member Functions inherited from itk::ProcessObject
 ProcessObject ()
 
 ~ProcessObject () override
 
DataObjectGetInput (const DataObjectIdentifierType &key)
 
const DataObjectGetInput (const DataObjectIdentifierType &key) const
 
DataObjectGetInput (DataObjectPointerArraySizeType idx)
 
const DataObjectGetInput (DataObjectPointerArraySizeType idx) const
 
virtual void SetInput (const DataObjectIdentifierType &key, DataObject *input)
 
virtual void SetNthInput (DataObjectPointerArraySizeType idx, DataObject *input)
 
virtual void AddInput (DataObject *input)
 
virtual void RemoveInput (const DataObjectIdentifierType &key)
 
virtual void RemoveInput (DataObjectPointerArraySizeType)
 
DataObjectGetPrimaryInput ()
 
const DataObjectGetPrimaryInput () const
 
virtual void SetPrimaryInputName (const DataObjectIdentifierType &key)
 
virtual const char * GetPrimaryInputName () const
 
virtual void SetPrimaryInput (DataObject *object)
 
void SetNumberOfIndexedInputs (DataObjectPointerArraySizeType num)
 
virtual void SetNumberOfRequiredInputs (DataObjectPointerArraySizeType)
 
virtual const DataObjectPointerArraySizeTypeGetNumberOfRequiredInputs () const
 
bool RemoveRequiredInputName (const DataObjectIdentifierType &)
 
bool IsRequiredInputName (const DataObjectIdentifierType &) const
 
void SetRequiredInputNames (const NameArray &)
 
bool AddRequiredInputName (const DataObjectIdentifierType &)
 
bool AddRequiredInputName (const DataObjectIdentifierType &, DataObjectPointerArraySizeType idx)
 
void AddOptionalInputName (const DataObjectIdentifierType &)
 
void AddOptionalInputName (const DataObjectIdentifierType &, DataObjectPointerArraySizeType idx)
 
DataObjectGetOutput (const DataObjectIdentifierType &key)
 
const DataObjectGetOutput (const DataObjectIdentifierType &key) const
 
virtual void SetPrimaryOutputName (const DataObjectIdentifierType &key)
 
virtual const char * GetPrimaryOutputName () const
 
DataObjectGetOutput (DataObjectPointerArraySizeType i)
 
const DataObjectGetOutput (DataObjectPointerArraySizeType i) const
 
virtual void SetOutput (const DataObjectIdentifierType &name, DataObject *output)
 
virtual void RemoveOutput (const DataObjectIdentifierType &key)
 
DataObjectGetPrimaryOutput ()
 
const DataObjectGetPrimaryOutput () const
 
virtual void SetPrimaryOutput (DataObject *object)
 
virtual void SetNthOutput (DataObjectPointerArraySizeType idx, DataObject *output)
 
virtual void AddOutput (DataObject *output)
 
virtual void RemoveOutput (DataObjectPointerArraySizeType idx)
 
virtual void SetNumberOfRequiredOutputs (DataObjectPointerArraySizeType _arg)
 
virtual const DataObjectPointerArraySizeTypeGetNumberOfRequiredOutputs () const
 
void SetNumberOfIndexedOutputs (DataObjectPointerArraySizeType num)
 
DataObjectIdentifierType MakeNameFromInputIndex (DataObjectPointerArraySizeType idx) const
 
DataObjectIdentifierType MakeNameFromOutputIndex (DataObjectPointerArraySizeType idx) const
 
DataObjectPointerArraySizeType MakeIndexFromInputName (const DataObjectIdentifierType &name) const
 
DataObjectPointerArraySizeType MakeIndexFromOutputName (const DataObjectIdentifierType &name) const
 
bool IsIndexedInputName (const DataObjectIdentifierType &) const
 
bool IsIndexedOutputName (const DataObjectIdentifierType &) const
 
virtual void VerifyPreconditions () ITKv5_CONST
 
virtual void GenerateOutputRequestedRegion (DataObject *output)
 
virtual void GenerateOutputInformation ()
 
virtual void PropagateResetPipeline ()
 
virtual void ReleaseInputs ()
 
virtual void CacheInputReleaseDataFlags ()
 
virtual void RestoreInputReleaseDataFlags ()
 
virtual bool GetThreaderUpdateProgress () const
 
virtual void ThreaderUpdateProgressOn ()
 
virtual void ThreaderUpdateProgressOff ()
 
virtual void SetThreaderUpdateProgress (bool arg)
 
- Protected Member Functions inherited from itk::Object
 Object ()
 
 ~Object () override
 
bool PrintObservers (std::ostream &os, Indent indent) const
 
virtual void SetTimeStamp (const TimeStamp &timeStamp)
 
- Protected Member Functions inherited from itk::LightObject
virtual LightObject::Pointer InternalClone () const
 
 LightObject ()
 
virtual void PrintHeader (std::ostream &os, Indent indent) const
 
virtual void PrintTrailer (std::ostream &os, Indent indent) const
 
virtual ~LightObject ()
 
- Static Protected Member Functions inherited from itk::ImageSource< TOutputImage >
static const ImageRegionSplitterBaseGetGlobalDefaultSplitter ()
 
static ITK_THREAD_RETURN_FUNCTION_CALL_CONVENTION ThreaderCallback (void *arg)
 
- Static Protected Member Functions inherited from itk::ProcessObject
static constexpr float progressFixedToFloat (uint32_t fixed)
 
static uint32_t progressFloatToFixed (float f)
 
- Protected Attributes inherited from itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >
SizeType m_Size
 
int m_NumberOfSeeds { 200 }
 
SizeValueType m_MinRegion { 20 }
 
int m_Steps { 0 }
 
int m_LastStepSeeds { 0 }
 
int m_NumberOfSeedsToAdded { 0 }
 
int m_NumberOfBoundary { 0 }
 
std::vector< SizeValueTypem_NumberOfPixels
 
std::vector< unsigned char > m_Label
 
double m_MeanDeviation { 0.8 }
 
bool m_UseBackgroundInAPrior { false }
 
bool m_OutputBoundary { false }
 
bool m_InteractiveSegmentation { false }
 
VoronoiDiagram::Pointer m_WorkingVD
 
VoronoiDiagramGenerator::Pointer m_VDGenerator
 
std::vector< PointTypem_SeedsToAdded
 
- Protected Attributes inherited from itk::ImageSource< TOutputImage >
bool m_DynamicMultiThreading
 
- Protected Attributes inherited from itk::ProcessObject
bool m_Updating
 
TimeStamp m_OutputInformationMTime
 
- Protected Attributes inherited from itk::LightObject
std::atomic< int > m_ReferenceCount
 

Detailed Description

template<typename TInputImage, typename TOutputImage, typename TBinaryPriorImage = Image<unsigned char, 2>>
class itk::VoronoiSegmentationImageFilter< TInputImage, TOutputImage, TBinaryPriorImage >

Perform the segmentation of 2D images (single channel) by Voronoi Diagram. Used as a node of the segmentation toolkits. The homogeneity operator here is the testing of mean and standard deviation value. By setting the tolerance level, the "internal" region was defined as those that is closed to the gold-standard value in the sense that the difference is within the tolerance value.

See VoronoiSegmentationImageFilterBase for detail description of voronoi segmentation principles.

The parameters here are:

  1. the estimation of the statistics of the object. (mean and std.)
  2. the tolerance for the classification. (around the mean ans std. estimated value).

The parameters can also be automatically set by given a prior, as a binary image.

Detail information about this algorithm can be found in: " Semi-automated color segmentation of anatomical tissue," C. Imelinska, M. Downes, and W. Yuan Computerized Medical Imaging and Graphics, Vor.24, pp 173-180, 2000.

Definition at line 53 of file itkVoronoiSegmentationImageFilter.h.

Member Typedef Documentation

◆ BinaryObjectImage

template<typename TInputImage , typename TOutputImage , typename TBinaryPriorImage = Image<unsigned char, 2>>
using itk::VoronoiSegmentationImageFilter< TInputImage, TOutputImage, TBinaryPriorImage >::BinaryObjectImage = typename Superclass::BinaryObjectImage

Convenient type alias.

Definition at line 72 of file itkVoronoiSegmentationImageFilter.h.

◆ ConstPointer

template<typename TInputImage , typename TOutputImage , typename TBinaryPriorImage = Image<unsigned char, 2>>
using itk::VoronoiSegmentationImageFilter< TInputImage, TOutputImage, TBinaryPriorImage >::ConstPointer = SmartPointer<const Self>

Definition at line 63 of file itkVoronoiSegmentationImageFilter.h.

◆ IndexList

template<typename TInputImage , typename TOutputImage , typename TBinaryPriorImage = Image<unsigned char, 2>>
using itk::VoronoiSegmentationImageFilter< TInputImage, TOutputImage, TBinaryPriorImage >::IndexList = typename Superclass::IndexList

Definition at line 73 of file itkVoronoiSegmentationImageFilter.h.

◆ IndexType

template<typename TInputImage , typename TOutputImage , typename TBinaryPriorImage = Image<unsigned char, 2>>
using itk::VoronoiSegmentationImageFilter< TInputImage, TOutputImage, TBinaryPriorImage >::IndexType = typename Superclass::IndexType

Definition at line 74 of file itkVoronoiSegmentationImageFilter.h.

◆ InputImageType

template<typename TInputImage , typename TOutputImage , typename TBinaryPriorImage = Image<unsigned char, 2>>
using itk::VoronoiSegmentationImageFilter< TInputImage, TOutputImage, TBinaryPriorImage >::InputImageType = typename Superclass::InputImageType

Definition at line 76 of file itkVoronoiSegmentationImageFilter.h.

◆ Pointer

template<typename TInputImage , typename TOutputImage , typename TBinaryPriorImage = Image<unsigned char, 2>>
using itk::VoronoiSegmentationImageFilter< TInputImage, TOutputImage, TBinaryPriorImage >::Pointer = SmartPointer<Self>

Definition at line 62 of file itkVoronoiSegmentationImageFilter.h.

◆ RegionType

template<typename TInputImage , typename TOutputImage , typename TBinaryPriorImage = Image<unsigned char, 2>>
using itk::VoronoiSegmentationImageFilter< TInputImage, TOutputImage, TBinaryPriorImage >::RegionType = typename Superclass::RegionType

Definition at line 75 of file itkVoronoiSegmentationImageFilter.h.

◆ Self

template<typename TInputImage , typename TOutputImage , typename TBinaryPriorImage = Image<unsigned char, 2>>
using itk::VoronoiSegmentationImageFilter< TInputImage, TOutputImage, TBinaryPriorImage >::Self = VoronoiSegmentationImageFilter

Standard class type aliases.

Definition at line 60 of file itkVoronoiSegmentationImageFilter.h.

◆ Superclass

template<typename TInputImage , typename TOutputImage , typename TBinaryPriorImage = Image<unsigned char, 2>>
using itk::VoronoiSegmentationImageFilter< TInputImage, TOutputImage, TBinaryPriorImage >::Superclass = VoronoiSegmentationImageFilterBase<TInputImage, TOutputImage, TBinaryPriorImage>

Definition at line 61 of file itkVoronoiSegmentationImageFilter.h.

Constructor & Destructor Documentation

◆ VoronoiSegmentationImageFilter()

template<typename TInputImage , typename TOutputImage , typename TBinaryPriorImage = Image<unsigned char, 2>>
itk::VoronoiSegmentationImageFilter< TInputImage, TOutputImage, TBinaryPriorImage >::VoronoiSegmentationImageFilter ( )
protecteddefault

ImageDimension enumeration

◆ ~VoronoiSegmentationImageFilter()

template<typename TInputImage , typename TOutputImage , typename TBinaryPriorImage = Image<unsigned char, 2>>
itk::VoronoiSegmentationImageFilter< TInputImage, TOutputImage, TBinaryPriorImage >::~VoronoiSegmentationImageFilter ( )
overrideprotecteddefault

ImageDimension enumeration

Member Function Documentation

◆ CreateAnother()

template<typename TInputImage , typename TOutputImage , typename TBinaryPriorImage = Image<unsigned char, 2>>
virtual::itk::LightObject::Pointer itk::VoronoiSegmentationImageFilter< TInputImage, TOutputImage, TBinaryPriorImage >::CreateAnother ( ) const
virtual

Create an object from an instance, potentially deferring to a factory. This method allows you to create an instance of an object that is exactly the same type as the referring object. This is useful in cases where an object has been cast back to a base class.

Reimplemented from itk::Object.

◆ GetMean()

template<typename TInputImage , typename TOutputImage , typename TBinaryPriorImage = Image<unsigned char, 2>>
virtual double itk::VoronoiSegmentationImageFilter< TInputImage, TOutputImage, TBinaryPriorImage >::GetMean ( ) const
virtual

ImageDimension enumeration

◆ GetMeanPercentError()

template<typename TInputImage , typename TOutputImage , typename TBinaryPriorImage = Image<unsigned char, 2>>
virtual double itk::VoronoiSegmentationImageFilter< TInputImage, TOutputImage, TBinaryPriorImage >::GetMeanPercentError ( ) const
virtual

ImageDimension enumeration

◆ GetMeanTolerance()

template<typename TInputImage , typename TOutputImage , typename TBinaryPriorImage = Image<unsigned char, 2>>
virtual double itk::VoronoiSegmentationImageFilter< TInputImage, TOutputImage, TBinaryPriorImage >::GetMeanTolerance ( ) const
virtual

ImageDimension enumeration

◆ GetNameOfClass()

template<typename TInputImage , typename TOutputImage , typename TBinaryPriorImage = Image<unsigned char, 2>>
virtual const char* itk::VoronoiSegmentationImageFilter< TInputImage, TOutputImage, TBinaryPriorImage >::GetNameOfClass ( ) const
virtual

Run-time type information (and related methods).

Reimplemented from itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >.

◆ GetSTD()

template<typename TInputImage , typename TOutputImage , typename TBinaryPriorImage = Image<unsigned char, 2>>
virtual double itk::VoronoiSegmentationImageFilter< TInputImage, TOutputImage, TBinaryPriorImage >::GetSTD ( ) const
virtual

ImageDimension enumeration

◆ GetSTDPercentError()

template<typename TInputImage , typename TOutputImage , typename TBinaryPriorImage = Image<unsigned char, 2>>
virtual double itk::VoronoiSegmentationImageFilter< TInputImage, TOutputImage, TBinaryPriorImage >::GetSTDPercentError ( ) const
virtual

Set/Get the STD percent error.

◆ GetSTDTolerance()

template<typename TInputImage , typename TOutputImage , typename TBinaryPriorImage = Image<unsigned char, 2>>
virtual double itk::VoronoiSegmentationImageFilter< TInputImage, TOutputImage, TBinaryPriorImage >::GetSTDTolerance ( ) const
virtual

Get the Tolearance of Variance for classifying the regions.

◆ New()

template<typename TInputImage , typename TOutputImage , typename TBinaryPriorImage = Image<unsigned char, 2>>
static Pointer itk::VoronoiSegmentationImageFilter< TInputImage, TOutputImage, TBinaryPriorImage >::New ( )
static

Method for creation through the object factory.

◆ PrintSelf()

template<typename TInputImage , typename TOutputImage , typename TBinaryPriorImage = Image<unsigned char, 2>>
void itk::VoronoiSegmentationImageFilter< TInputImage, TOutputImage, TBinaryPriorImage >::PrintSelf ( std::ostream &  os,
Indent  indent 
) const
overrideprotectedvirtual

ImageDimension enumeration

Reimplemented from itk::ImageToImageFilter< TInputImage, TOutputImage >.

◆ SetMean()

template<typename TInputImage , typename TOutputImage , typename TBinaryPriorImage = Image<unsigned char, 2>>
virtual void itk::VoronoiSegmentationImageFilter< TInputImage, TOutputImage, TBinaryPriorImage >::SetMean ( double  _arg)
virtual

Set/Get the Estimation of the mean pixel value for the object.

◆ SetMeanPercentError()

template<typename TInputImage , typename TOutputImage , typename TBinaryPriorImage = Image<unsigned char, 2>>
void itk::VoronoiSegmentationImageFilter< TInputImage, TOutputImage, TBinaryPriorImage >::SetMeanPercentError ( double  x)

Set/Get the mean percent error.

◆ SetMeanTolerance()

template<typename TInputImage , typename TOutputImage , typename TBinaryPriorImage = Image<unsigned char, 2>>
virtual void itk::VoronoiSegmentationImageFilter< TInputImage, TOutputImage, TBinaryPriorImage >::SetMeanTolerance ( double  _arg)
virtual

Set/Get the Tolearance of Mean for classifying the regions.

◆ SetSTD()

template<typename TInputImage , typename TOutputImage , typename TBinaryPriorImage = Image<unsigned char, 2>>
virtual void itk::VoronoiSegmentationImageFilter< TInputImage, TOutputImage, TBinaryPriorImage >::SetSTD ( double  _arg)
virtual

Set/Get the estimation of the STD of the pixel value for the object.

◆ SetSTDPercentError()

template<typename TInputImage , typename TOutputImage , typename TBinaryPriorImage = Image<unsigned char, 2>>
void itk::VoronoiSegmentationImageFilter< TInputImage, TOutputImage, TBinaryPriorImage >::SetSTDPercentError ( double  x)

ImageDimension enumeration

◆ SetSTDTolerance()

template<typename TInputImage , typename TOutputImage , typename TBinaryPriorImage = Image<unsigned char, 2>>
virtual void itk::VoronoiSegmentationImageFilter< TInputImage, TOutputImage, TBinaryPriorImage >::SetSTDTolerance ( double  _arg)
virtual

Set the Tolearance of STD for classifying the regions.

◆ TakeAPrior()

template<typename TInputImage , typename TOutputImage , typename TBinaryPriorImage = Image<unsigned char, 2>>
void itk::VoronoiSegmentationImageFilter< TInputImage, TOutputImage, TBinaryPriorImage >::TakeAPrior ( const BinaryObjectImage aprior)
override

Take a prior from other segmentation node, should be an binary object.

◆ TestHomogeneity()

template<typename TInputImage , typename TOutputImage , typename TBinaryPriorImage = Image<unsigned char, 2>>
bool itk::VoronoiSegmentationImageFilter< TInputImage, TOutputImage, TBinaryPriorImage >::TestHomogeneity ( IndexList Plist)
overrideprivate

ImageDimension enumeration

Member Data Documentation

◆ InputImageDimension

template<typename TInputImage , typename TOutputImage , typename TBinaryPriorImage = Image<unsigned char, 2>>
constexpr unsigned int itk::VoronoiSegmentationImageFilter< TInputImage, TOutputImage, TBinaryPriorImage >::InputImageDimension = TInputImage::ImageDimension
staticconstexpr

ImageDimension enumeration

Definition at line 118 of file itkVoronoiSegmentationImageFilter.h.

◆ m_Mean

template<typename TInputImage , typename TOutputImage , typename TBinaryPriorImage = Image<unsigned char, 2>>
double itk::VoronoiSegmentationImageFilter< TInputImage, TOutputImage, TBinaryPriorImage >::m_Mean { 0.0 }
private

ImageDimension enumeration

Definition at line 135 of file itkVoronoiSegmentationImageFilter.h.

◆ m_MeanPercentError

template<typename TInputImage , typename TOutputImage , typename TBinaryPriorImage = Image<unsigned char, 2>>
double itk::VoronoiSegmentationImageFilter< TInputImage, TOutputImage, TBinaryPriorImage >::m_MeanPercentError { 0.10 }
private

ImageDimension enumeration

Definition at line 139 of file itkVoronoiSegmentationImageFilter.h.

◆ m_MeanTolerance

template<typename TInputImage , typename TOutputImage , typename TBinaryPriorImage = Image<unsigned char, 2>>
double itk::VoronoiSegmentationImageFilter< TInputImage, TOutputImage, TBinaryPriorImage >::m_MeanTolerance { 0.0 }
private

ImageDimension enumeration

Definition at line 137 of file itkVoronoiSegmentationImageFilter.h.

◆ m_STD

template<typename TInputImage , typename TOutputImage , typename TBinaryPriorImage = Image<unsigned char, 2>>
double itk::VoronoiSegmentationImageFilter< TInputImage, TOutputImage, TBinaryPriorImage >::m_STD { 0.0 }
private

ImageDimension enumeration

Definition at line 136 of file itkVoronoiSegmentationImageFilter.h.

◆ m_STDPercentError

template<typename TInputImage , typename TOutputImage , typename TBinaryPriorImage = Image<unsigned char, 2>>
double itk::VoronoiSegmentationImageFilter< TInputImage, TOutputImage, TBinaryPriorImage >::m_STDPercentError { 1.5 }
private

ImageDimension enumeration

Definition at line 140 of file itkVoronoiSegmentationImageFilter.h.

◆ m_STDTolerance

template<typename TInputImage , typename TOutputImage , typename TBinaryPriorImage = Image<unsigned char, 2>>
double itk::VoronoiSegmentationImageFilter< TInputImage, TOutputImage, TBinaryPriorImage >::m_STDTolerance { 0.0 }
private

ImageDimension enumeration

Definition at line 138 of file itkVoronoiSegmentationImageFilter.h.

◆ OutputImageDimension

template<typename TInputImage , typename TOutputImage , typename TBinaryPriorImage = Image<unsigned char, 2>>
constexpr unsigned int itk::VoronoiSegmentationImageFilter< TInputImage, TOutputImage, TBinaryPriorImage >::OutputImageDimension = TOutputImage::ImageDimension
staticconstexpr

ImageDimension enumeration

Definition at line 119 of file itkVoronoiSegmentationImageFilter.h.


The documentation for this class was generated from the following file: