itkMaskImageFilter.h

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/*=========================================================================
 *
 *  Copyright NumFOCUS
 *
 *  Licensed under the Apache License, Version 2.0 (the "License");
 *  you may not use this file except in compliance with the License.
 *  You may obtain a copy of the License at
 *
 *         http://www.apache.org/licenses/LICENSE-2.0.txt
 *
 *  Unless required by applicable law or agreed to in writing, software
 *  distributed under the License is distributed on an "AS IS" BASIS,
 *  WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
 *  See the License for the specific language governing permissions and
 *  limitations under the License.
 *
 *=========================================================================*/
#ifndef itkMaskImageFilter_h
#define itkMaskImageFilter_h
 
#include "itkBinaryGeneratorImageFilter.h"
#include "itkNumericTraits.h"
#include "itkVariableLengthVector.h"
#include "itkMath.h"
 
namespace itk
{
namespace Functor
{
template <typename TInput, typename TMask, typename TOutput = TInput>
class MaskInput
{
public:
  using AccumulatorType = typename NumericTraits<TInput>::AccumulateType;
 
  MaskInput()
  {
    m_MaskingValue = NumericTraits<TMask>::ZeroValue();
    InitializeOutsideValue(static_cast<TOutput *>(nullptr));
  }
  ~MaskInput() = default;
  bool
  operator!=(const MaskInput &) const
  {
    return false;
  }
 
  bool
  operator==(const MaskInput & other) const
  {
    return !(*this != other);
  }
 
  inline TOutput
  operator()(const TInput & A, const TMask & B) const
  {
    if (B != m_MaskingValue)
    {
      return static_cast<TOutput>(A);
    }
    else
    {
      return m_OutsideValue;
    }
  }
 
  void
  SetOutsideValue(const TOutput & outsideValue)
  {
    m_OutsideValue = outsideValue;
  }
 
  const TOutput &
  GetOutsideValue() const
  {
    return m_OutsideValue;
  }
 
  void
  SetMaskingValue(const TMask & maskingValue)
  {
    m_MaskingValue = maskingValue;
  }
 
  const TMask &
  GetMaskingValue() const
  {
    return m_MaskingValue;
  }
 
private:
  template <typename TPixelType>
  void
  InitializeOutsideValue(TPixelType *)
  {
    this->m_OutsideValue = NumericTraits<TPixelType>::ZeroValue();
  }
 
  template <typename TValue>
  void
  InitializeOutsideValue(VariableLengthVector<TValue> *)
  {
    // set the outside value to be of zero length
    this->m_OutsideValue = VariableLengthVector<TValue>(0);
  }
 
  TOutput m_OutsideValue;
  TMask   m_MaskingValue;
};
} // namespace Functor
 
template <typename TInputImage, typename TMaskImage, typename TOutputImage = TInputImage>
class MaskImageFilter : public BinaryGeneratorImageFilter<TInputImage, TMaskImage, TOutputImage>
 
{
public:
  ITK_DISALLOW_COPY_AND_MOVE(MaskImageFilter);
 
  using Self = MaskImageFilter;
  using Superclass = BinaryGeneratorImageFilter<TInputImage, TMaskImage, TOutputImage>;
 
  using FunctorType = Functor::
    MaskInput<typename TInputImage::PixelType, typename TMaskImage::PixelType, typename TOutputImage::PixelType>;
 
  using Pointer = SmartPointer<Self>;
  using ConstPointer = SmartPointer<const Self>;
 
  itkNewMacro(Self);
 
  itkTypeMacro(MaskImageFilter, BinaryGeneratorImageFilter);
 
  using MaskImageType = TMaskImage;
 
  void
  SetMaskImage(const MaskImageType * maskImage)
  {
    // Process object is not const-correct so the const casting is required.
    this->SetNthInput(1, const_cast<MaskImageType *>(maskImage));
  }
  const MaskImageType *
  GetMaskImage()
  {
    return static_cast<const MaskImageType *>(this->ProcessObject::GetInput(1));
  }
 
  void
  SetOutsideValue(const typename TOutputImage::PixelType & outsideValue)
  {
    if (Math::NotExactlyEquals(this->GetOutsideValue(), outsideValue))
    {
      this->Modified();
      this->GetFunctor().SetOutsideValue(outsideValue);
    }
  }
 
  const typename TOutputImage::PixelType &
  GetOutsideValue() const
  {
    return this->GetFunctor().GetOutsideValue();
  }
 
  void
  SetMaskingValue(const typename TMaskImage::PixelType & maskingValue)
  {
    if (this->GetMaskingValue() != maskingValue)
    {
      this->Modified();
      this->GetFunctor().SetMaskingValue(maskingValue);
    }
  }
 
  const typename TMaskImage::PixelType &
  GetMaskingValue() const
  {
    return this->GetFunctor().GetMaskingValue();
  }
 
#ifdef ITK_USE_CONCEPT_CHECKING
  // Begin concept checking
  itkConceptMacro(MaskEqualityComparableCheck, (Concept::EqualityComparable<typename TMaskImage::PixelType>));
  itkConceptMacro(InputConvertibleToOutputCheck,
                  (Concept::Convertible<typename TInputImage::PixelType, typename TOutputImage::PixelType>));
  // End concept checking
#endif
 
protected:
  MaskImageFilter() = default;
  ~MaskImageFilter() override = default;
 
  void
  PrintSelf(std::ostream & os, Indent indent) const override
  {
    Superclass::PrintSelf(os, indent);
    os << indent << "OutsideValue: " << this->GetOutsideValue() << std::endl;
  }
 
  void
  BeforeThreadedGenerateData() override
  {
    using PixelType = typename TOutputImage::PixelType;
    this->CheckOutsideValue(static_cast<PixelType *>(nullptr));
 
    this->SetFunctor(this->GetFunctor());
  }
 
private:
  itkGetConstReferenceMacro(Functor, FunctorType);
  FunctorType &
  GetFunctor()
  {
    return m_Functor;
  }
 
  FunctorType m_Functor;
 
  template <typename TPixelType>
  void
  CheckOutsideValue(const TPixelType *)
  {}
 
  template <typename TValue>
  void
  CheckOutsideValue(const VariableLengthVector<TValue> *)
  {
    // Check to see if the outside value contains only zeros. If so,
    // resize it to have the same number of zeros as the output
    // image. Otherwise, check that the number of components in the
    // outside value is the same as the number of components in the
    // output image. If not, throw an exception.
    VariableLengthVector<TValue> currentValue = this->GetFunctor().GetOutsideValue();
    VariableLengthVector<TValue> zeroVector(currentValue.GetSize());
    zeroVector.Fill(NumericTraits<TValue>::ZeroValue());
 
    if (currentValue == zeroVector)
    {
      zeroVector.SetSize(this->GetOutput()->GetVectorLength());
      zeroVector.Fill(NumericTraits<TValue>::ZeroValue());
      this->GetFunctor().SetOutsideValue(zeroVector);
    }
    else if (this->GetFunctor().GetOutsideValue().GetSize() != this->GetOutput()->GetVectorLength())
    {
      itkExceptionMacro(<< "Number of components in OutsideValue: " << this->GetFunctor().GetOutsideValue().GetSize()
                        << " is not the same as the "
                        << "number of components in the image: " << this->GetOutput()->GetVectorLength());
    }
  }
};
} // end namespace itk
 
#endif