Release 2.6

This release covers the period December 1, 2005 through March 11, 2006.

Schedule

Release Number	Start Date	End Date
Last period for adding classes	January 15 2006	February 11 2006
Feature freeze	February 12 2006	February 26 2006
CVS Tagging	March 11, 2006	March 11, 2006
Testing tarballs	March 11, 2006	March 13, 2006
Posting tarballs	March 14 2006	March 14 2006

New Classes in this Release

Code/Algorithms/itkBayesianClassifierInitializationImageFilter

Code/BasicFilters/itkInvertIntensityImageFilter
Code/BasicFilters/itkModulusImageFilter
Code/BasicFilters/itkMorphologicalGradientImageFilter

Code/Common/itkCovariantVector
Code/Common/itkSumOfSquaresImageFunction

Code/Review/CMakeLists.txt
Code/Review/itkThresholdMaximumConnectedComponentsImageFilter
Code/Review/README.txt

New Tests in this Release

Testing/Code/Common/itkMeshSourceGraftOutputTest
Testing/Code/Common/itkTransformsSetParametersTest

Testing/Code/BasicFilters/itkInvertIntensityImageFilterTest
Testing/Code/BasicFilters/itkMaskNeighborhoodOperatorImageFilterTest
Testing/Code/BasicFilters/itkMatrixIndexSelectionImageFilterTest
Testing/Code/BasicFilters/itkModulusImageFilterTest
Testing/Code/BasicFilters/itkMorphologicalGradientImageFilterTest
Testing/Code/BasicFilters/itkNotImageFilterTest
Testing/Code/BasicFilters/itkPushPopTileImageFilterTest
Testing/Code/BasicFilters/itkTernaryMagnitudeSquaredImageFilterTest
Testing/Code/BasicFilters/itkVectorConnectedComponentImageFilterTest

Testing/Code/IO/itkRawImageIOTest5

Testing/Code/Numerics/NeuralNetworks/itkNeuralNetworkTests3

Testing/Code/Review/CMakeLists.txt
Testing/Code/Review/itkReviewHeaderTest
Testing/Code/Review/itkReviewPrintTest
Testing/Code/Review/itkReviewTests
Testing/Code/Review/itkThresholdMaximumConnectedComponentsImageFilterTest
Testing/Code/Review/README.txt

New Examples in this Release


Examples/Filtering/FilteringExamples8

Examples/IO/ImageReadExtractFilterInsertWrite

Examples/Statistics/BayesianClassifier
Examples/Statistics/BayesianClassifierInitializer
Examples/Statistics/StatisticsExamplesTests4

New Utilities in this Release

Utilities/Dart/NewSince.csh.in
Utilities/Dart/NewSince.gawk
Utilities/Doxygen/cvsVersionFilter.
Utilities/gdcm/CMake/CTestCustom.ctest.in
Utilities/gdcm/CMake/FindRsync.cmake
Utilities/gdcm/Dicts/ACUSON.d
Utilities/gdcm/Dicts/DictGroupName.d
Utilities/gdcm/Dicts/ELSCINT.d
Utilities/gdcm/Dicts/gdcm.dic.in
Utilities/gdcm/Dicts/GE-EchoPAC.d
Utilities/gdcm/Dicts/GEMS-Advance.d
Utilities/gdcm/Dicts/GEMS-Advantx.d
Utilities/gdcm/Dicts/GEMS-CR.d
Utilities/gdcm/Dicts/GEMS.d
Utilities/gdcm/Dicts/GEMS-DLX.d
Utilities/gdcm/Dicts/GEMS-Genie.d
Utilities/gdcm/Dicts/GEMS-HiSpeed.d
Utilities/gdcm/Dicts/GEMS-Infinia.d
Utilities/gdcm/Dicts/HITACHI-MR-pronto.d
Utilities/gdcm/Dicts/NIH.d
Utilities/gdcm/Dicts/Papyrus.d
Utilities/gdcm/Dicts/ParseDict.py
Utilities/gdcm/Dicts/PHILIPS-EasyVision.d
Utilities/gdcm/Dicts/PHILIPS-Intera.d
Utilities/gdcm/Dicts/SIEMENS.d
Utilities/gdcm/Dicts/SIEMENS-syngo.d
Utilities/gdcm/Dicts/SPI.d
Utilities/gdcm/src/gdcmArgMgr
Utilities/gdcm/src/gdcmDicomDirVisit
Utilities/gdcm/src/gdcmDictGroupName
Utilities/gdcm/src/gdcmMpeg
Utilities/gdcm/src/gdcmValidator
Utilities/kwsys/DynamicLoader
Utilities/kwsys/DynamicLoader.hxx.in
Utilities/kwsys/String.hxx.in
Utilities/kwsys/testDynamicLoader
Utilities/kwsys/testDynload
Utilities/openjpeg/bio
Utilities/openjpeg/cio
Utilities/openjpeg/CMakeLists.txt
Utilities/openjpeg/dwt
Utilities/openjpeg/event
Utilities/openjpeg/fix
Utilities/openjpeg/image
Utilities/openjpeg/int
Utilities/openjpeg/j2k
Utilities/openjpeg/j2k_lib
Utilities/openjpeg/jp2
Utilities/openjpeg/jpt
Utilities/openjpeg/mct
Utilities/openjpeg/mqc
Utilities/openjpeg/.NoDartCoverage
Utilities/openjpeg/openjpeg
Utilities/openjpeg/opj_includes
Utilities/openjpeg/pi
Utilities/openjpeg/raw
Utilities/openjpeg/README.ITK.txt
Utilities/openjpeg/t1
Utilities/openjpeg/t2
Utilities/openjpeg/tcd
Utilities/openjpeg/tgt

Changes in this Release

CMakeLists.txt
ENH: ExceptionObject now reports method name.

itkConfigure.h.in
ENH: ExceptionObject now reports method name.

itkIncludeDirectories.cmake
BUG: expat is installed, but ITK_INCLUDE_DIRS fail to report so, therefore any external projects trying to use an installed ITK will fail as soon as a file like itkXMLFile.h is included (it requires expat.h).

CMake/CheckCPPDirective.cmake

ENH: ExceptionObject now reports method name.

CMake/CheckCPPDirectiveExists.cxx.in
ENH: better Borland support.

CMake/InsightValgrind.supp
ENH: Valgrind suppressions with libstdc++.so.6

Code/CMakeLists.txt

Code/Algorithms/itkBayesianClassifierImageFilter
STYLE: Add NAMIC attribution
COMP: Stupid error. Calling things from typedef prior to declaring
COMP: Borland issues. Use the GetStaticConstMacro to fetch Dimension

Code/Algorithms/itkBayesianClassifierImageFilter
STYLE: indentation.

Code/Algorithms/itkBayesianClassifierInitializationImageFilter
STYLE: Add NAMIC attribution
COMP: Borland issues. Use the GetStaticConstMacro to fetch Dimension

Code/Algorithms/itkBayesianClassifierInitializationImageFilter
COMP: cannot assign a T to a Vector< T, 1 > on VS6 apparently
ENH: VS typename issues.
ENH: Filter to initialize the bayesian classifer filter with a membership image

Code/Algorithms/itkBinaryMedialNodeMetric
ENH: Move include from header to implementation

Code/Algorithms/itkBinaryMedialNodeMetr
ENH: Move include from header to implementation

Code/Algorithms/itkBioCell
STYLE: Some style cleanup

Code/Algorithms/itkBioCellBase
STYLE: Some style cleanup

Code/Algorithms/itkBioCellularAggregate
STYLE: Some style cleanup

Code/Algorithms/itkBioCellularAggregateBase
STYLE: Some style cleanup

Code/Algorithms/itkBioGenome
STYLE: Some style cleanup

Code/Algorithms/itkClassifierBase
STYLE: Some style cleanup

Code/Algorithms/itkCurvatureRegistrationFilter
STYLE: Some style cleanup

Code/Algorithms/itkDeformableSimplexMesh3DBalloonForceFilter
STYLE: Some style cleanup

Code/Algorithms/itkDeformableSimplexMesh3DFilter
STYLE: Some style cleanup

Code/Algorithms/itkDeformableSimplexMesh3DGradientConstraintForceFilter
COMP: warnings.

Code/Algorithms/itkFEMRegistrationFilter
ENH: more consistent use of ExceptionMacro and ExceptionObject.

Code/Algorithms/itkFastMarchingImageFilter
ENH: more consistent use of ExceptionMacro and ExceptionObject.

Code/Algorithms/itkGradientDifferenceImageToImageMetric
BUG: #2543. BoundaryCondotion objects are now ivars.

Code/Algorithms/itkGradientDifferenceImageToImageMetr
BUG: removed debugging statements.

Code/Algorithms/itkHistogramImageToImageMetr
BUG: throw exception before checking derivate sizes.

Code/Algorithms/itkHistogramMatchingImageFilter
COMP: Fixed typecasting to remove compiler warnings for all histogram image types.

Code/Algorithms/itkImageGaussianModelEstimator
ENH: more consistent use of ExceptionMacro and ExceptionObject.

Code/Algorithms/itkImageKmeansModelEstimator
ENH: more consistent use of ExceptionMacro and ExceptionObject.

Code/Algorithms/itkImageRegistrationMethod
COMP: some intel compilers have trouble with data allocated in the catch (apparently).

Code/Algorithms/itkIsoContourDistanceImageFilter
ENH: more consistent use of ExceptionMacro and ExceptionObject.

Code/Algorithms/itkKappaStatisticImageToImageMetric

Code/Algorithms/itkKappaStatisticImageToImageMetr

Code/Algorithms/itkMIRegistrationFunction
ENH: more consistent use of ExceptionMacro and ExceptionObject.

Code/Algorithms/itkMRFImageFilter
ENH: more consistent use of ExceptionMacro and ExceptionObject.

Code/Algorithms/itkMeanSquareRegistrationFunction
ENH: more consistent use of ExceptionMacro and ExceptionObject.

Code/Algorithms/itkMinMaxCurvatureFlowFunction
BUG: Fix compiler errors when non-double pixel types are used. See InsightJournal review for MATITK

Code/Algorithms/itkMultiResolutionImageRegistrationMethod
stl/Vector.html) VS8 has stricter checks and managed to catch the bug.

Code/Algorithms/itkNCCRegistrationFunction
ENH: more consistent use of ExceptionMacro and ExceptionObject.

Code/Algorithms/itkRayCastInterpolateImageFunction
ENH: more consistent use of ExceptionMacro and ExceptionObject.

Code/Algorithms/itkRegularSphereMeshSource
STYLE: Some style cleanup

Code/Algorithms/itkStructHashFunction
STYLE: Some style cleanup

Code/Algorithms/itkVnlFFTRealToComplexConjugateImageFilter
ENH: more consistent use of ExceptionMacro and ExceptionObject.

Code/Algorithms/itkVoronoiSegmentationImageFilterBase
BUG: compilation errors repaired.

Code/Algorithms/itkVoronoiSegmentationRGBImageFilter

Code/BasicFilters/itkAbsImageFilter
COMP: warnings about unused parameter.
ENH: added operator==and operator!= methods.

Code/BasicFilters/itkAbsoluteValueDifferenceImageFilter
COMP: warnings about unused parameter.
ENH: added operator==and operator!= methods.

Code/BasicFilters/itkAccumulateImageFilter
STYLE: indentation.

Code/BasicFilters/itkAcosImageFilter
COMP: warnings about unused parameter.
ENH: added operator==and operator!= methods.

Code/BasicFilters/itkAdaptImageFilter
ENH: Added operator== and operator!=.

Code/BasicFilters/itkAdaptiveHistogramEqualizationImageFilter
ENH: more consistent use of ExceptionMacro and ExceptionObject.

Code/BasicFilters/itkAddImageFilter
COMP: warnings about unused parameter.
ENH: added operator==and operator!= methods.

Code/BasicFilters/itkAndImageFilter
COMP: warnings about unused parameter.

Code/BasicFilters/itkAnisotropicDiffusionImageFilter
ENH: more consistent use of ExceptionMacro and ExceptionObject.

Code/BasicFilters/itkAsinImageFilter
COMP: warnings about unused parameter.

Code/BasicFilters/itkAtan2ImageFilter
COMP: warnings about unused parameter.

Code/BasicFilters/itkAtanImageFilter
COMP: warnings about unused parameter.

Code/BasicFilters/itkBSplineCenteredL2ResampleImageFilterBase
ENH: better Exception description.

Code/BasicFilters/itkBSplineCenteredResampleImageFilterBase
ENH: better Exception description.

Code/BasicFilters/itkBSplineDecompositionImageFilter
ENH: more consistent use of ExceptionMacro and ExceptionObject.

Code/BasicFilters/itkBSplineInterpolateImageFunction
ENH: more consistent use of ExceptionMacro and ExceptionObject.

Code/BasicFilters/itkBSplineL2ResampleImageFilterBase
ENH: better Exception description.

Code/BasicFilters/itkBSplineResampleImageFilterBase
ENH: better Exception description.

Code/BasicFilters/itkBilateralImageFilter
ENH: more consistent use of ExceptionMacro and ExceptionObject.

Code/BasicFilters/itkBinaryErodeImageFilter
STYLE: removed dummy variable access.

Code/BasicFilters/itkBinaryFunctorImageFilter
ENH: Added operator== and operator!=.

Code/BasicFilters/itkBinaryMagnitudeImageFilter
COMP: warnings about unused parameter.

Code/BasicFilters/itkBinaryMedianImageFilter
ENH: more consistent use of ExceptionMacro and ExceptionObject.

Code/BasicFilters/itkBinaryMorphologyImageFilter
ENH: more consistent use of ExceptionMacro and ExceptionObject.

Code/BasicFilters/itkBinaryThresholdImageFilter
ENH: Added operator== and operator!=.

Code/BasicFilters/itkBloxBoundaryProfileImageToBloxCoreAtomImageFilter
ENH: remove redundant dim parameter from itkBloxBoundaryProfileImageToBloxCoreAtomImageFilter

Code/BasicFilters/itkBoundedReciprocalImageFilter
COMP: warnings about unused parameter.

Code/BasicFilters/itkCastImageFilter
COMP: warnings about unused parameter.

Code/BasicFilters/itkChangeLabelImageFilter
COMP: Fix for bug 2753: itkChangeLabelImageFilter.h -- ChangeLabel::SetChangeMap not const-correct.

Code/BasicFilters/itkClosingByReconstructionImageFilter
ENH: added flag to preserve original intesities.

Code/BasicFilters/itkClosingByReconstructionImageFilter
BUG: PrintSelf defect.

Code/BasicFilters/itkComplexToImaginaryImageFilter
COMP: warnings about unused parameter.

Code/BasicFilters/itkComplexToModulusImageFilter
COMP: warnings about unused parameter.

Code/BasicFilters/itkComplexToPhaseImageFilter
COMP: warnings about unused parameter.

Code/BasicFilters/itkComplexToRealImageFilter
COMP: warnings about unused parameter.

Code/BasicFilters/itkCompose2DCovariantVectorImageFilter
COMP: warnings about unused parameter.

Code/BasicFilters/itkCompose2DVectorImageFilter
COMP: warnings about unused parameter.

Code/BasicFilters/itkCompose3DCovariantVectorImageFilter
COMP: warnings about unused parameter.

Code/BasicFilters/itkCompose3DVectorImageFilter
COMP: warnings about unused parameter.

Code/BasicFilters/itkComposeRGBImageFilter
COMP: warnings about unused parameter.

Code/BasicFilters/itkConfidenceConnectedImageFilter
STYLE: Spelling

Code/BasicFilters/itkConfidenceConnectedImageFilter
ENH: Corrected several calculations and improved performance

Code/BasicFilters/itkConnectedComponentFunctorImageFilter
BUG: must use NumericTraits to compare to non-zero.

Code/BasicFilters/itkConnectedComponentFunctorImageFilter
BUG: bad logic introduced in last checkin.

Code/BasicFilters/itkConnectedComponentImageFilter
BUG: must use NumericTraits to compare to non-zero.

Code/BasicFilters/itkConstrainedValueAdditionImageFilter
COMP: warnings about unused parameter.

Code/BasicFilters/itkConstrainedValueDifferenceImageFilter
COMP: warnings about unused parameter.

Code/BasicFilters/itkCosImageFilter
COMP: warnings about unused parameter.

Code/BasicFilters/itkDeformationFieldJacobianDeterminantFilter
ENH: more consistent use of ExceptionMacro and ExceptionObject.

Code/BasicFilters/itkDerivativeImageFilter
ENH: more consistent use of ExceptionMacro and ExceptionObject.

Code/BasicFilters/itkDiffusionTensor3DReconstructionImageFilter
BUG: Sorry Bill. Didn't realize that you had commited a fix. Revert to Bills fix.
COMP: GetBValue is defined as a macro on windows. Need to undef it if present.
ENH: Allow for the DW gradient images to be specified as a single multi-component image (vectorimage) or as several itk::Images. The former is a convenient input from nrrd format for DWI images

Code/BasicFilters/itkDiffusionTensor3DReconstructionImageFilter
BUG: uninitialized ivar.
BUG: Check if container is null before printing it. (was causing print tests to segfault)

Code/BasicFilters/itkDiscreteGaussianImageFilter
ENH: more consistent use of ExceptionMacro and ExceptionObject.

Code/BasicFilters/itkDivideImageFilter
COMP: warnings about unused parameter.

Code/BasicFilters/itkEdgePotentialImageFilter
COMP: warnings about unused parameter.

Code/BasicFilters/itkExpImageFilter
COMP: warnings about unused parameter.

Code/BasicFilters/itkExpNegativeImageFilter
ENH: Added operator== and operator!=.

Code/BasicFilters/itkExtractImageFilter

Code/BasicFilters/itkFastIncrementalBinaryDilateImageFilter
BUG: missing include file for superclass.

Code/BasicFilters/itkGetAverageSliceImageFilter
ENH: this class is equivalent to AccumulateImageFilter with AveragingOn and a slightly different api. It is now a subclass of AccumulateImageFilter.

Code/BasicFilters/itkGradientImageFilter
ENH: more consistent use of ExceptionMacro and ExceptionObject.

Code/BasicFilters/itkGradientMagnitudeImageFilter
ENH: more consistent use of ExceptionMacro and ExceptionObject.

Code/BasicFilters/itkGradientToMagnitudeImageFilter
COMP: warnings about unused parameter.

Code/BasicFilters/itkGrayscaleGeodesicDilateImageFilter
ENH: more consistent use of ExceptionMacro and ExceptionObject.

Code/BasicFilters/itkGrayscaleGeodesicErodeImageFilter
ENH: more consistent use of ExceptionMacro and ExceptionObject.

Code/BasicFilters/itkHoughTransform2DLinesImageFilter

Code/BasicFilters/itkIntensityWindowingImageFilter
ENH: Added operator== and operator!=.

Code/BasicFilters/itkInteriorExteriorMeshFilter
ENH: more consistent use of ExceptionMacro and ExceptionObject.

Code/BasicFilters/itkInvertIntensityImageFilter
ENH: new filters contributed by Gaetan Lehmann via the Insight Journal.

Code/BasicFilters/itkIterativeInverseDeformationFieldImageFilter
BUG: did not have progress. STYLE: did not have copyright. STYLE: indentation.

Code/BasicFilters/itkJoinImageFilter
COMP: warnings about unused parameter.

Code/BasicFilters/itkJoinSeriesImageFilter
ENH: more consistent use of ExceptionMacro and ExceptionObject.

Code/BasicFilters/itkLaplacianImageFilter
ENH: more consistent use of ExceptionMacro and ExceptionObject.

Code/BasicFilters/itkLaplacianSharpeningImageFilter
ENH: more consistent use of ExceptionMacro and ExceptionObject.

Code/BasicFilters/Attic/itkLazyEdgeDetectionImageFilter3D
ENH: removed because it was a utility class for the removed class MidsagittalPlaneExtractionImageFilter.

Code/BasicFilters/itkLog10ImageFilter
COMP: warnings about unused parameter.

Code/BasicFilters/itkLogImageFilter
COMP: warnings about unused parameter.

Code/BasicFilters/itkMaskImageFilter
COMP: warnings about unused parameter.

Code/BasicFilters/itkMaskNegatedImageFilter
COMP: warnings about unused parameter.

Code/BasicFilters/itkMaskNeighborhoodOperatorImageFilter

Code/BasicFilters/itkMaskNeighborhoodOperatorImageFilter
ENH: more consistent use of ExceptionMacro and ExceptionObject.

Code/BasicFilters/itkMatrixIndexSelectionImageFilter
ENH: Added operator== and operator!=.

Code/BasicFilters/itkMaximumImageFilter
COMP: warnings about unused parameter.

Code/BasicFilters/itkMeanImageFilter
ENH: more consistent use of ExceptionMacro and ExceptionObject.

Code/BasicFilters/itkMedianImageFilter
ENH: more consistent use of ExceptionMacro and ExceptionObject.

Code/BasicFilters/itkMinimumImageFilter
COMP: warnings about unused parameter.

Code/BasicFilters/itkModulusImageFilter
ENH: new filters contributed by Gaetan Lehmann via the Insight Journal.

Code/BasicFilters/itkMorphologicalGradientImageFilter
ENH: new filters contributed by Gaetan Lehmann via the Insight Journal.

Code/BasicFilters/itkMorphologyImageFilter
ENH: more consistent use of ExceptionMacro and ExceptionObject.

Code/BasicFilters/itkMultiplyImageFilter
COMP: warnings about unused parameter.
ENH: added operator==and operator!= methods.

Code/BasicFilters/itkNarrowBandImageFilterBase
ENH: more consistent use of ExceptionMacro and ExceptionObject.

Code/BasicFilters/itkNaryAddImageFilter
ENH: Added operator== and operator!=.

Code/BasicFilters/itkNaryMaximumImageFilter
ENH: Added operator== and operator!=.

Code/BasicFilters/itkNeighborhoodOperatorImageFilter
ENH: more consistent use of ExceptionMacro and ExceptionObject.

Code/BasicFilters/itkNoiseImageFilter
ENH: more consistent use of ExceptionMacro and ExceptionObject.

Code/BasicFilters/itkNormalizedCorrelationImageFilter
ENH: more consistent use of ExceptionMacro and ExceptionObject.

Code/BasicFilters/itkNotImageFilter
COMP: warnings about unused parameter.

Code/BasicFilters/itkObjectMorphologyImageFilter
ENH: more consistent use of ExceptionMacro and ExceptionObject.

Code/BasicFilters/itkOpeningByReconstructionImageFilter
ENH: added flag to preserve original intesities.

Code/BasicFilters/itkOrImageFilter
COMP: warnings about unused parameter.

Code/BasicFilters/itkParallelSparseFieldLevelSetImageFilter
ENH: more consistent use of ExceptionMacro and ExceptionObject.

Code/BasicFilters/itkPasteImageFilter

Code/BasicFilters/itkPasteImageFilter
BUG: type in type names.

Code/BasicFilters/itkPermuteAxesImageFilter
ENH: better Exception description.

Code/BasicFilters/itkPolylineMask2DImageFilter
STYLE: Beef up the documentation (Andinet)

Code/BasicFilters/itkRGBToLuminanceImageFilter
COMP: warnings about unused parameter.

Code/BasicFilters/itkRecursiveSeparableImageFilter
ENH: more consistent use of ExceptionMacro and ExceptionObject.

Code/BasicFilters/itkRegionOfInterestImageFilter
BUG: output region was not being set correctly.

Code/BasicFilters/itkRescaleIntensityImageFilter
ENH: Added operator== and operator!=.

Code/BasicFilters/itkScalarConnectedComponentImageFilter
ENH: Added operator== and operator!=.

Code/BasicFilters/itkShrinkImageFilter
BUG: Bug # 2811 A second call of Update() causes InvalidRequesedRegion Error.

Code/BasicFilters/itkShrinkImageFilter
BUG: Bug # 2811 A second call of Update() function causes InvalidRequesedRegion Error.

Code/BasicFilters/itkSigmoidImageFilter
ENH: Added operator== and operator!=.

Code/BasicFilters/itkSimpleContourExtractorImageFilter
ENH: more consistent use of ExceptionMacro and ExceptionObject.

Code/BasicFilters/itkSimplexMeshAdaptTopologyFilter
STYLE: Some style cleanup

Code/BasicFilters/itkSinImageFilter
COMP: warnings about unused parameter.

Code/BasicFilters/itkSobelEdgeDetectionImageFilter
ENH: more consistent use of ExceptionMacro and ExceptionObject.

Code/BasicFilters/itkSparseFieldLevelSetImageFilter
BUG: Fix compiler errors when non-double pixel types are used. See InsightJournal review for MATITK

Code/BasicFilters/itkSqrtImageFilter
COMP: warnings about unused parameter.

Code/BasicFilters/itkSquareImageFilter
COMP: warnings about unused parameter.

Code/BasicFilters/itkSquaredDifferenceImageFilter
COMP: warnings about unused parameter.

Code/BasicFilters/itkSubtractImageFilter
COMP: warnings about unused parameter.

Code/BasicFilters/itkSymmetricEigenAnalysisImageFilter
COMP: warnings about unused parameter.

Code/BasicFilters/itkTanImageFilter
COMP: warnings about unused parameter.

Code/BasicFilters/itkTensorFractionalAnisotropyImageFilter
COMP: warnings about unused parameter.

Code/BasicFilters/itkTensorRelativeAnisotropyImageFilter
COMP: warnings about unused parameter.

Code/BasicFilters/itkTernaryAddImageFilter
COMP: warnings about unused parameter.

Code/BasicFilters/itkTernaryFunctorImageFilter
ENH: Added operator== and operator!=.

Code/BasicFilters/itkTernaryMagnitudeImageFilter
COMP: warnings about unused parameter.

Code/BasicFilters/itkTernaryMagnitudeSquaredImageFilter
COMP: warnings about unused parameter.

Code/BasicFilters/itkThresholdLabelerImageFilter
ENH: Added operator== and operator!=.

Code/BasicFilters/itkTileImageFilter
BUG: Improper region calculation for output.

Code/BasicFilters/itkUnaryFunctorImageFilter
ENH: Added operator== and operator!=.

Code/BasicFilters/itkVectorCastImageFilter
COMP: warnings about unused parameter.

Code/BasicFilters/itkVectorConfidenceConnectedImageFilter
ENH: more consistent use of ExceptionMacro and ExceptionObject.

Code/BasicFilters/itkVectorConnectedComponentImageFilter
COMP: warnings about unused parameter.
COMP: typename issues with VS6.

Code/BasicFilters/itkVectorExpandImageFilter
ENH: more consistent use of ExceptionMacro and ExceptionObject.

Code/BasicFilters/itkVectorGradientMagnitudeImageFilter
ENH: more consistent use of ExceptionMacro and ExceptionObject.

Code/BasicFilters/itkVectorIndexSelectionCastImageFilter
ENH: Added operator== and operator!=.

Code/BasicFilters/itkVectorNeighborhoodOperatorImageFilter
ENH: more consistent use of ExceptionMacro and ExceptionObject.

Code/BasicFilters/itkVectorResampleImageFilter
ENH: Allow user to specify precision. STYLE: GetObject change to GetConstObject.
ENH: follows same logic as ResampleImageFilter. BUG: was not setting directions on output.

Code/BasicFilters/itkVectorResampleImageFilter
COMP: Set threads to 1 if Borland.
BUG: missing typedef. BUG: warnings.

Code/BasicFilters/itkVectorRescaleIntensityImageFilter
ENH: Added operator== and operator!=.

Code/BasicFilters/itkVotingBinaryImageFilter
ENH: more consistent use of ExceptionMacro and ExceptionObject.

Code/BasicFilters/itkVotingBinaryIterativeHoleFillingImageFilter
STYLE: spelling.

Code/BasicFilters/itkWeightedAddImageFilter
ENH: added operator==and operator!= methods.

Code/BasicFilters/itkXorImageFilter
COMP: warnings about unused parameter.

Code/BasicFilters/itkZeroCrossingBasedEdgeDetectionImageFilter
ENH: more consistent use of ExceptionMacro and ExceptionObject.

Code/BasicFilters/itkZeroCrossingImageFilter
ENH: more consistent use of ExceptionMacro and ExceptionObject.

Code/Common/CMakeLists.txt
ENH: Adding CrossProduct for 3D.

Code/Common/itkAnnulusOperator
BUG: Incorrect define prevents Sobel include

Code/Common/itkBSplineDerivativeKernelFunction
STYLE: Some style cleanup

Code/Common/itkBSplineInterpolationWeightFunction
STYLE: Some style cleanup

Code/Common/itkBSplineKernelFunction
STYLE: Some style cleanup

Code/Common/itkBarrier

Code/Common/itkBinaryBallStructuringElement
STYLE: no need for itk:: withing itk namespace.

Code/Common/itkBinaryThresholdImageFunction
STYLE: Some style cleanup

Code/Common/itkBinaryThresholdSpatialFunction
STYLE: Some style cleanup

Code/Common/itkBloxBoundaryPointImage
COMP: Move traits around for the sun compilers

Code/Common/itkBloxBoundaryProfileItem
STYLE: Some style cleanup

Code/Common/itkBloxImage
COMP: Move traits around for the sun compilers

Code/Common/itkBloxItem

Code/Common/itkBluePixelAccessor
ENH: Added operator== and operator!=.

Code/Common/itkCenteredAffineTransform
BUG: 2769. SetParameters() method was missing to invoke Modified().

Code/Common/itkCenteredEuler3DTransform

Code/Common/itkCenteredRigid2DTransform

ENH: simplify modified time computation.
BUG: was not setting modified times.

Code/Common/itkCenteredSimilarity2DTransform

Code/Common/itkCentralDifferenceImageFunction
STYLE: Some style cleanup

Code/Common/itkChainCodePath
STYLE: Some style cleanup

Code/Common/itkChainCodePath2D
STYLE: Some style cleanup

Code/Common/itkConceptChecking
STYLE: Some style cleanup

Code/Common/itkConditionVariable
STYLE: Some style cleanup

Code/Common/itkCovarianceImageFunction
STYLE: Some style cleanup

Code/Common/itkCovariantVector
ENH: Adding CrossProduct for 3D.

Code/Common/itkCovariantVector
COMP: warnings regarding placement of inline modifier.
COMP: Keep vs60 happy
COMP: Borland gets confused by a templated premultiply operator.. Force it to be a scalar of the same scalar type as the vector is templated over, so borland is now forced to recognize it as a scalar
ENH: Adding CrossProduct for 3D.

Code/Common/itkCovariantVector

Code/Common/itkDataObject
ENH: more consistent use of ExceptionMacro and ExceptionObject.

Code/Common/itkDataObject
COMP: warnings.

Code/Common/itkDirectory
COMP: Fix compilation

Code/Common/itkEuler3DTransform
COMP: Warnings
BUG: 2769. SetParameters() method was missing to invoke Modified().

Code/Common/itkExceptionObject
COMP: __FUNCTION__ is only valid within a function.

Code/Common/itkExtrapolateImageFunction
STYLE: Some style cleanup

Code/Common/itkFastMutexLock
ENH: Redo implementation of itkDirectory to use kwsys (avoid duplicating code). Also fix some minor style

Code/Common/itkFiniteDifferenceImageFilter
STYLE: doxygen cleanups

Code/Common/itkFiniteDifferenceImageFilter
ENH: more consistent use of ExceptionMacro and ExceptionObject.

Code/Common/itkFourierSeriesPath
STYLE: Some style cleanup

Code/Common/itkFourierSeriesPa
STYLE: Some style cleanup

Code/Common/itkFunctionBase
STYLE: Some style cleanup

Code/Common/itkGaussianBlurImageFunction
STYLE: Some style cleanup

Code/Common/itkGaussianDerivativeImageFunction
STYLE: Some style cleanup

Code/Common/itkGaussianKernelFunction
STYLE: Some style cleanup

Code/Common/itkGaussianOperator
ENH: more consistent use of ExceptionMacro and ExceptionObject.

Code/Common/itkGreenPixelAccessor
ENH: Added operator== and operator!=.

Code/Common/itkHexahedronCell
ENH: Added EvaluatePosition()

Code/Common/itkHexahedronCell

ENH: Added EvaluatePosition()

Code/Common/itkImage
COMP: Move traits around for the sun compilers

Code/Common/itkImage
COMP: warnings.

Code/Common/itkImageAdaptor
COMP: Move traits around for the sun compilers

Code/Common/itkImageAdaptor

Code/Common/itkImageBase
COMP: Move traits around for the sun compilers

Code/Common/itkImageBase
COMP: warnings.

Code/Common/itkImageConstIteratorWithIndex
BUG: SetBegin should set the pointer to the begin of the buffer. was setting the one that pointed to the begin of the region instead

Code/Common/itkImageFunction
BUG: Wrong argument type was used for a continuous index output
STYLE: Some style cleanup

Code/Common/itkImageFunction
STYLE: Some style cleanup

Code/Common/itkImageRegionConstIterator
COMP: Fix for bug 2781, wherein some copy constructors for imageRegion[Const]Iterator do not compile.

Code/Common/itkImageRegionIterator
COMP: Fix for bug 2781, wherein some copy constructors for imageRegion[Const]Iterator do not compile.

Code/Common/itkImageSource

Code/Common/itkImageToImageFilter
BUG: un-hide methods from superclass

Code/Common/itkImageToImageFilter

Code/Common/itkImportImageContainer
ENH: more consistent use of ExceptionMacro and ExceptionObject.

Code/Common/itkInterpolateImageFunction
STYLE: Some style cleanup

Code/Common/itkIterationReporter
STYLE: Some style cleanup

Code/Common/itkKLMSegmentationBorder
STYLE: Some style cleanup

Code/Common/itkKLMSegmentationRegion
STYLE: Some style cleanup

Code/Common/itkKernelFunction
STYLE: Some style cleanup

Code/Common/itkKernelTransform
BUG: 2769. SetParameters() method was missing to invoke Modified().

Code/Common/itkLandmarkBasedTransformInitializer
BUG: bug 2632. Else check should have set angle to 90 degrees

Code/Common/itkLevelSet
STYLE: Some style cleanup

Code/Common/itkLightObject
STYLE: Some style cleanup

Code/Common/itkLinearInterpolateImageFunction
STYLE: Some style cleanup

Code/Common/itkLogOutput
STYLE: Some style cleanup

Code/Common/itkLogger
STYLE: Some style cleanup

Code/Common/itkLoggerBase
STYLE: Some style cleanup

Code/Common/itkLoggerManager
STYLE: Some style cleanup

Code/Common/itkLoggerThreadWrapper
STYLE: Some style cleanup

Code/Common/itkLoggerThreadWrapper
BUG: Did not have blockers for includes.

Code/Common/itkMacro
BUG: cygwin does not have __FUNCSIG__.
ENH: More descriptive ExceptionMacro.

Code/Common/itkMahalanobisDistanceThresholdImageFunction
STYLE: Some style cleanup

Code/Common/itkMapContainer

Code/Common/itkMatrixOffsetTransformBase
BUG: 2769. SetParameters() method was missing to invoke Modified().

Code/Common/itkMeanImageFunction
STYLE: Some style cleanup

Code/Common/itkMedianImageFunction
STYLE: Some style cleanup

Code/Common/itkMeshSource

Code/Common/itkMetaDataObject
STYLE: Already within the itk namespace

Code/Common/itkMultipleLogOutput
STYLE: Some style cleanup

Code/Common/itkNearestNeighborExtrapolateImageFunction
STYLE: Some style cleanup

Code/Common/itkNearestNeighborInterpolateImageFunction
STYLE: Some style cleanup

Code/Common/itkNeighborhoodBinaryThresholdImageFunction
STYLE: Some style cleanup

Code/Common/itkNeighborhoodIterator
ENH: more consistent use of ExceptionMacro and ExceptionObject.

Code/Common/itkNeighborhoodOperatorImageFunction
STYLE: Some style cleanup

Code/Common/itkNumericTraitsCovariantVectorPixel
STYLE: Some style cleanup

Code/Common/itkNumericTraitsTensorPixel
STYLE: Some style cleanup

Code/Common/itkNumericTraitsVectorPixel
STYLE: Some style cleanup

Code/Common/itkObject
STYLE: Some style cleanup

Code/Common/itkOctree
STYLE: Some style cleanup

Code/Common/itkOctreeNode
STYLE: Some style cleanup

Code/Common/itkOrientedImage
COMP: Move traits around for the sun compilers

Code/Common/itkPCAShapeSignedDistanceFunction
STYLE: Some style cleanup

Code/Common/itkParametricPa
STYLE: Some style cleanup

Code/Common/itkParametricPath
STYLE: Some style cleanup

Code/Common/itkPath
ENH: Fix for bug 2918. Add PathDimension static constant to class.

Code/Common/itkPa
STYLE: Some style cleanup

Code/Common/itkPathFunctions
STYLE: Some style cleanup

Code/Common/itkPathSource
STYLE: Some style cleanup

Code/Common/itkPathToPathFilter
STYLE: Some style cleanup

Code/Common/itkPhasedArray3DSpecialCoordinatesImage
COMP: Move traits around for the sun compilers

Code/Common/itkPointSet
STYLE: Some style cleanup

Code/Common/itkPolyLineParametricPath
STYLE: Some style cleanup

Code/Common/itkPolyLineParametricPa
STYLE: Some style cleanup

Code/Common/itkProcessObject

Code/Common/itkProgressReporter
STYLE: Some style cleanup

Code/Common/itkQuaternionRigidTransform
BUG: 2769. SetParameters() method was missing to invoke Modified().

Code/Common/itkRealTimeClock
STYLE: Already within the itk namespace

Code/Common/itkRedPixelAccessor
ENH: Added operator== and operator!=.

Code/Common/itkRigid2DTransform

ENH: more consistent use of ExceptionMacro and ExceptionObject.

Code/Common/itkRigid3DPerspectiveTransform

Code/Common/itkScalarToRGBPixelFunctor
STYLE: Some style cleanup

Code/Common/itkScaleLogarithmicTransform
BUG: 2769. SetParameters() method was missing to invoke Modified().

Code/Common/itkScaleSkewVersor3DTransform

Code/Common/itkScaleTransform
BUG: 2769. SetParameters() method was missing to invoke Modified().

Code/Common/itkScatterMatrixImageFunction
STYLE: Some style cleanup

Code/Common/itkSegmentationBorder
STYLE: Some style cleanup

Code/Common/itkSegmentationRegion
STYLE: Some style cleanup

Code/Common/itkSemaphore

Code/Common/itkShapeSignedDistanceFunction
STYLE: Some style cleanup

Code/Common/itkSimilarity2DTransform

ENH: more consistent use of ExceptionMacro and ExceptionObject.

Code/Common/itkSimilarity3DTransform

Code/Common/itkSimpleFastMutexLock
ENH: Redo implementation of itkDirectory to use kwsys (avoid duplicating code). Also fix some minor style

Code/Common/itkSimpleFilterWatcher
ENH: Now uses TimeProbe.

Code/Common/itkSimpleFilterWatcher
STYLE: Some style cleanup

Code/Common/itkSmartPointer
ENH: Redo implementation of itkDirectory to use kwsys (avoid duplicating code). Also fix some minor style

Code/Common/itkSmartPointerForwardReference
ENH: Redo implementation of itkDirectory to use kwsys (avoid duplicating code). Also fix some minor style

Code/Common/itkSparseImage
COMP: Move traits around for the sun compilers

Code/Common/itkSpecialCoordinatesImage
COMP: Move traits around for the sun compilers

Code/Common/itkSphereSignedDistanceFunction
STYLE: Some style cleanup

Code/Common/itkStdStreamLogOutput
STYLE: Some style cleanup

Code/Common/itkSumOfSquaresImageFunction
COMP: warnings,
ENH: Function to calculate the sum of squares in a neighborhood

Code/Common/itkSumOfSquaresImageFunction
STYLE: Some style cleanup

Code/Common/itkTestMain
ENH: moved code into .h file.

Code/Common/itkTetrahedronCell
STYLE: indentation

Code/Common/itkThreadLogger
STYLE: Some style cleanup

Code/Common/itkTimeProbe
STYLE: Some style cleanup

Code/Common/itkTranslationTransform
STYLE: no need for this dereference.
COMP: Type mismatch on method.

Code/Common/itkTreeIteratorBase
ENH: more consistent use of ExceptionMacro and ExceptionObject.

Code/Common/itkVariableLengthVector
ENH: Add GetSquaredNorm method to class
ENH: premultiplication with scalars

Code/Common/itkVariableLengthVector
ENH: Add GetSquaredNorm method to class

Code/Common/itkVarianceImageFunction
STYLE: Some style cleanup

Code/Common/itkVector
COMP: warnings regarding placement of inline modifier.
COMP: Borland gets confused by a templated premultiply operator.. Force it to be a scalar of the same scalar type as the vector is templated over, so borland is now forced to recognize it as a scalar
ENH: Premultiply operator for product of scalar and a vector, from Casey Goodlett

Code/Common/itkVector

Code/Common/itkVectorContainer

Code/Common/itkVectorImage
STYLE: More documentation
COMP: Move traits around for the sun compilers

Code/Common/itkVectorImage

Code/Common/itkVectorImageToImageAdaptor
BUG: The vector image returns a pixel created on the stack, not a reference to a pixel
COMP: Move traits around for the sun compilers

Code/Common/itkVectorInterpolateImageFunction
STYLE: Some style cleanup

Code/Common/itkVectorLinearInterpolateImageFunction
STYLE: Some style cleanup

Code/Common/itkVectorMeanImageFunction
STYLE: Some style cleanup

Code/Common/itkVectorNearestNeighborInterpolateImageFunction
ENH: moved code into .h file.
STYLE: Some style cleanup

Code/Common/itkVectorNearestNeighborInterpolateImageFunction
private/insight-developers/2006-February/007646.html
STYLE: Some style cleanup

Code/Common/itkVersor

Code/Common/itkVersorRigid3DTransform

Code/Common/itkVersorTransform

ENH: Now invoking Modified() from SetIdentity().

Code/Common/itkWindowedSincInterpolateImageFunction
STYLE: Some style cleanup

Code/IO/itkAnalyzeImageIO
ENH: better exception reporting.

Code/IO/itkBMPImageIO
ENH: Better exception reporting.

Code/IO/itkBrains2HeaderBase
STYLE: Some style cleanup

Code/IO/itkBrains2IPLHeaderInfo
STYLE: Some style cleanup

Code/IO/itkBrains2MaskHeaderInfo
STYLE: Some style cleanup

Code/IO/itkConvertPixelBuffer

Code/IO/itkConvertPixelBuffer
COMP: signed unsigned comparison warnings

Code/IO/itkDefaultConvertPixelTraits
COMP: Fix for bug 2725, which prevented compliation of IO using signed char traits on some compilers.

Code/IO/itkGDCMImageIO
BUG: When writting 3D images, it allowed to access the 3d component of the ITK Spacing.
ENH: Provide an helper function around the MetaDataDictionary. Make it more user oriented.
BUG: Do not propagate group length as computation is not done
ENH: better exception reporting.
STYLE: more consistent use of types.

Code/IO/itkGDCMImageIO
ENH: Provide an helper function around the MetaDataDictionary. Make it more user oriented.
ENH: Bring AddRestriction from the gdcm level to the itkGDCM level. Update example to show usage, add more doc.

Code/IO/itkGDCMSeriesFileNames
ENH: Update gdcm version to 1.2

Code/IO/itkGDCMSeriesFileNames
ENH: Rename AddRestriction into AddSeriesRestriction

Code/IO/itkGE4ImageIO
STYLE: Some style cleanup

Code/IO/itkGEImageHeader
STYLE: Some style cleanup

Code/IO/itkIPLCommonImageIO
BUG: Report orientation in direction cosines

Code/IO/itkIPLFileNameList
STYLE: Some style cleanup

Code/IO/itkImageFileReader
ENH: Better exception reporting.
ENH: Make DefaultConvertPixelTraits a trait of the image to make IO support of VectorImage consistent. Forward declare it so it doesn't increase parsing time.

Code/IO/itkImageFileReader
COMP: previous fix does not work for all pixel types... defer until its made correct
ENH: Better exception reporting.

Code/IO/itkImageFileWriter
ENH: Better exception reporting.

Code/IO/itkImageFileWriter
ENH: better exception message.

Code/IO/itkImageSeriesReader
STYLE: minor style

Code/IO/itkMetaImageIO
BUG: Peter Cech found typo that produced incorrect index to physical transform for origin update with direction cosines.
BUG: MetaIO now supports 64bit int on platforms having 64bit ints. Thanks to help from Robert Atwood at imperial.ac.uk

Code/IO/itkMetaImageIO
COMP: fixed member object reference

Code/IO/itkMvtSunf
STYLE: Some style cleanup

Code/IO/itkNiftiImageIO
BUG: suppress nifti library error messages

Code/IO/itkPNGImageIO
COMP: VS71 issues with exception macro.
ENH: better error messages

Code/IO/itkRawImageIO

Code/IO/itkTIFFImageIO
BUG: Remove previous commit, while avoiding compiler warning

Code/IO/itkVTKImageIO
ENH: Use the kwsys lib instead

Code/Numerics/Statistics/itkDenseFrequencyContainer
BUG: Minor.. remove \#defines that were left when copied over from older txx code

Code/Numerics/Statistics/itkDensityFunction
BUG: Base and superclass had the same method and ivar. Bug 2880

Code/Numerics/Statistics/itkMembershipFunctionBase
BUG: Base and superclass had the same method and ivar. Bug 2880

Code/Numerics/Statistics/itkSample
BUG: Use traits to give a default length to the samples, so the user does not need to call SetMeasurementVectorSize( .. ) if TMeasurementVector is a FixedArray, Vector etc

Code/Numerics/Statistics/itkSparseFrequencyContainer
BUG: Minor.. remove \#defines that were left when copied over from older txx code

Code/Review/CMakeLists.txt
ENH: CMakeLists.txt file for the classes that are in the review process.

Code/Review/README.txt
STYLE: Notice regarding the purpose of this directory.

Code/Review/itkThresholdMaximumConnectedComponentsImageFilter
BUG: must use itkGetStaticConstMacro to access ImageDimension.
COMP: "typename" keywords missing.

Code/Review/itkThresholdMaximumConnectedComponentsImageFilter
COMP: "typename" keywords missing.

Code/SpatialObject/itkBlobSpatialObject
COMP: Warnings

Code/SpatialObject/itkLandmarkSpatialObject
COMP: Warnings

Code/SpatialObject/itkMetaMeshConverter
BUG: Replaced SetElement() by InsertElement() so the array is allocated when using StaticMeshTrait
BUG: the ID was not set when writing the mesh

Code/SpatialObject/itkPolygonGroupOrientation
STYLE: doxygen cleanups

Code/SpatialObject/itkPolygonGroupSpatialObject
STYLE: Some style cleanup

Code/SpatialObject/itkPolygonSpatialObject
STYLE: Some style cleanup

Code/SpatialObject/itkSceneSpatialObject
STYLE: Improved comments

Code/SpatialObject/itkSpatialObject
STYLE: Make TreeNode getters and setters use itk[Get|Set]ObjectMacro. Also affects compilation of wrappers, so it is a COMP issue too.

Code/SpatialObject/itkSpatialObject
COMP: Warnings

Code/SpatialObject/itkSpatialObjectTreeNode
ENH: Added private (unimplemented) copy constructor and = operator (reported by Zach Pincus)

Code/SpatialObject/itkSurfaceSpatialObject
COMP: Warnings

Code/SpatialObject/itkTubeSpatialObject
STYLE: Better documentation

Code/SpatialObject/itkTubeSpatialObject
COMP: Warnings

Documentation/Doxygen/DoxygenFooter.html
BUG: The link to Doxygen Home page was broken. Bad html extension.

Examples/Data/BayesianClassifierInitializerMemberships.mhd
ENH: new example input data.

Examples/Data/BayesianClassifierInitializerMemberships.raw
ENH: new example input data.

Examples/DataRepresentation/Image/CMakeLists.txt
COMP: removed tests from Borland.

Examples/Filtering/CMakeLists.txt
COMP: Borland LME linker.
COMP: Avoide borland LME1518 error.
ENH: Test and Example for the DiffusionTensor3DReconstructionImageFilter, TensorFractionalAnisotropyImageFilter, TensorRelativeAnisotropyImageFilter
COMP: removed tests to avoid Borland linker errors.

Examples/Filtering/DiffusionTensor3DReconstructionImageFilter
COMP: Unused var warnings

Examples/Filtering/DigitallyReconstructedRadiograph1
STYLE: Improving the coding style of the example.
ENH: Replacing old style #define for PI with a const double computed at run time.

Examples/Filtering/FilteringExamples
COMP: removed tests to avoid Borland linker errors.

Examples/Filtering/FilteringExamples5
ENH: Test and Example for the DiffusionTensor3DReconstructionImageFilter, TensorFractionalAnisotropyImageFilter, TensorRelativeAnisotropyImageFilter

Examples/Filtering/FilteringExamples8
COMP: removed tests to avoid Borland linker errors.

Examples/Filtering/ResampleImageFilter9
BUG: default pixel should be of type PixelType.
COMP: set threads to 1 to see if test passes on Borland.

Examples/Filtering/SecondDerivativeRecursiveGaussianImageFilter
STYLE: Shortening the error Usage line, so it fits the margins in the Software Guide.

Examples/IO/CMakeLists.txt

Examples/IO/DicomImageReadPrintTags
ENH: Provide an helper function around the MetaDataDictionary. Make it more user oriented.

Examples/IO/DicomSeriesReadImageWrite
ENH: signed short is more general for medical images.

Examples/IO/DicomSeriesReadImageWrite2
ENH: Rename AddRestriction into AddSeriesRestriction

Examples/IO/ImageReadExtractFilterInsertWrite

Examples/IO/ImageReadWrite
ENH: signed short is more general for medical images.

Examples/Iterators/CMakeLists.txt
COMP: Borland linker errors.
COMP: removed tests to avoid Borland linker errors.

Examples/Registration/CMakeLists.txt
COMP: Borland cannot link.

Examples/Registration/DeformableRegistration3
STYLE: Adding Hypenation for index entries. Software Guide.

Examples/Registration/ImageRegistration8
STYLE: Adding hypenations to index entries. Software Guide.

Examples/Registration/ModelToImageRegistration1
STYLE: latex typesetting issues

Examples/Registration/MultiResImageRegistration1
BUG: The Example require at least three arguments, so argc must be >= 4.

Examples/Registration/MultiResImageRegistration2
STYLE: Latex documentation fixes

Examples/SpatialObjects/SpatialObjectToImageStatisticsCalculator
STYLE: Adding hypenation for index entries. Software Guide.

Examples/Statistics/BayesianClassifier
COMP: Move traits around for the sun compilers

Examples/Statistics/BayesianClassifierInitializer
ENH: Examples and tests for the itk::BayesianClassifierInitializationImageFilter and itk::BayesianClassifierImageFilter

Examples/Statistics/CMakeLists.txt
COMP: Avoid Borland LME1518 linker errors.
COMP: avoid borland linker errors.
BUG: tests should never depend upon another test output.

Examples/Statistics/ImageEntropy1
COMP: LaTeX formatting was causing a compiler warning. Table new lines need to be represented with \cr instead of \

Examples/Statistics/ImageHistogram1
STYLE: Adding hypenation for index entries. Software Guide.

Examples/Statistics/ImageHistogram2
STYLE: Adding hypenation to index entries. Software Guide.

Examples/Statistics/ScalarImageKmeansClassifier
COMP: Missing semicolon.

Examples/Statistics/ScalarImageMarkovRandomField1
STYLE: Reformatting long lines of code that don't fit in the Software Guide margins.

Examples/Statistics/StatisticsExamplesTests4
ENH: Examples and tests for the itk::BayesianClassifierInitializationImageFilter and itk::BayesianClassifierImageFilter

Testing/Code/CMakeLists.txt

Testing/Code/Algorithms/CMakeLists.txt

Testing/Code/Algorithms/itkAlgorithmsPrintTest3
COMP: too much for the borland compiler to handle.

Testing/Code/Algorithms/itkAlgorithmsTests4

Testing/Code/Algorithms/Attic/itkBayesianClassifierImageFilterTest

Testing/Code/Algorithms/itkGradientDifferenceImageToImageMetricTest
ENH: Better range for metrix overlap testing.

Testing/Code/BasicFilters/CMakeLists.txt
ENH: new test
ENH: new tests contributed by Gaetan Lehmann via the Insight Journal.
ENH: added test for itkMatrixIndexSelectionImageFilter
BUG: Tests should not rely on other test output.
ENH: added optional difference image.
ENH: new regression test.
ENH: new regression test.

Testing/Code/BasicFilters/itkAbsImageFilterAndAdaptorTest
ENH: Added operator== and operator!=.

Testing/Code/BasicFilters/itkAbsoluteValueDifferenceImageFilterTest
ENH: Added operator== and operator!=.

Testing/Code/BasicFilters/itkAccumulateImageFilterTest
ENH: better coverage.

Testing/Code/BasicFilters/itkAcosImageFilterAndAdaptorTest
ENH: Added operator== and operator!=.

Testing/Code/BasicFilters/itkAdaptImageFilterTest
ENH: Added operator== and operator!=.

Testing/Code/BasicFilters/itkAddImageFilterTest
ENH: Added operator== and operator!=.

Testing/Code/BasicFilters/itkAndImageFilterTest
ENH: Added operator== and operator!=.

Testing/Code/BasicFilters/itkAsinImageFilterAndAdaptorTest
ENH: Added operator== and operator!=.

Testing/Code/BasicFilters/itkAtanImageFilterAndAdaptorTest
ENH: Added operator== and operator!=.

Testing/Code/BasicFilters/itkBasicFiltersHeaderTest
ENH: Added missing classes.

Testing/Code/BasicFilters/itkBasicFiltersPrintTest
ENH: remove redundant dim parameter from itkBloxBoundaryProfileImageToBloxCoreAtomImageFilter

Testing/Code/BasicFilters/itkBasicFiltersTests2
ENH: new test

Testing/Code/BasicFilters/itkBasicFiltersTests4
ENH: new tests contributed by Gaetan Lehmann via the Insight Journal.
ENH: new test.
ENH: new regression test.
ENH: new regression test.

Testing/Code/BasicFilters/itkBinaryDilateImageFilterTest2
ENH: better coverage.

Testing/Code/BasicFilters/itkBinaryMagnitudeImageFilterTest
ENH: Added operator== and operator!=.

Testing/Code/BasicFilters/itkBinaryThresholdImageFilterTest
ENH: Added operator== and operator!=.

Testing/Code/BasicFilters/itkBloxBoundaryProfileImageToBloxCoreAtomImageFilterTest
ENH: remove redundant dim parameter from itkBloxBoundaryProfileImageToBloxCoreAtomImageFilter

Testing/Code/BasicFilters/itkChangeLabelImageFilterTest
ENH: Added operator== and operator!=.

Testing/Code/BasicFilters/itkClosingByReconstructionImageFilterTest
ENH: new regression tests.
BUG: StructuringElement was uninitialized.

Testing/Code/BasicFilters/itkCompose2DCovariantVectorImageFilterTest
ENH: Added operator== and operator!=.

Testing/Code/BasicFilters/itkCompose3DCovariantVectorImageFilterTest
ENH: Added operator== and operator!=.

Testing/Code/BasicFilters/itkComposeRGBImageFilterTest
ENH: Added operator== and operator!=.

Testing/Code/BasicFilters/itkConstrainedValueDifferenceImageFilterTest
ENH: Added operator== and operator!=.

Testing/Code/BasicFilters/itkCosImageFilterAndAdaptorTest
ENH: Added operator== and operator!=.

Testing/Code/BasicFilters/itkDiffusionTensor3DReconstructionImageFilterTest
STYLE: missing copyright.
BUG: The filter normalizes the gradient directions when they are supplied now, this caused a slight precisoin issue. Although the gradient directions supplied with the test are almost of unit norm, the slight difference from 1 caused the failiure.

Testing/Code/BasicFilters/itkDivideImageFilterTest
ENH: Added operator== and operator!=.

Testing/Code/BasicFilters/itkEdgePotentialImageFilterTest
ENH: Added operator== and operator!=.

Testing/Code/BasicFilters/itkExpImageFilterAndAdaptorTest
ENH: Added operator== and operator!=.

Testing/Code/BasicFilters/itkExpNegativeImageFilterAndAdaptorTest
ENH: Added operator== and operator!=.

Testing/Code/BasicFilters/itkGetAverageSliceImageFilterTest
ENH: new regression test.

Testing/Code/BasicFilters/itkGradientToMagnitudeImageFilterTest
ENH: Added operator== and operator!=.

Testing/Code/BasicFilters/itkGrayscaleFillholeImageFilterTest
ENH: Added operator== and operator!=.

Testing/Code/BasicFilters/itkIntensityWindowingImageFilterTest
ENH: Added operator== and operator!=.

Testing/Code/BasicFilters/itkInvertIntensityImageFilterTest
ENH: new tests contributed by Gaetan Lehmann via the Insight Journal.

Testing/Code/BasicFilters/itkIterativeInverseDeformationFieldImageFilterTest
BUG: did not exit with failure if exception occurred.

Testing/Code/BasicFilters/itkJoinImageFilterTest
ENH: Added operator== and operator!=.

Testing/Code/BasicFilters/itkJoinSeriesImageFilterTest
BUG: tests should not depend on the text of the exception message.

Testing/Code/BasicFilters/itkLog10ImageFilterAndAdaptorTest
ENH: Added operator== and operator!=.

Testing/Code/BasicFilters/itkLogImageFilterAndAdaptorTest
ENH: Added operator== and operator!=.

Testing/Code/BasicFilters/itkMaskConnectedComponentImageFilterTest
BUG: type.

Testing/Code/BasicFilters/itkMaskImageFilterTest
ENH: Added operator== and operator!=.

Testing/Code/BasicFilters/itkMaskNegatedImageFilterTest
ENH: Added operator== and operator!=.

Testing/Code/BasicFilters/itkMaskNeighborhoodOperatorImageFilterTest
COMP: warnings.

Testing/Code/BasicFilters/itkMatrixIndexSelectionImageFilterTest
ENH: Added operator== and operator!=.

Testing/Code/BasicFilters/itkMaximumImageFilterTest
ENH: Added operator== and operator!=.

Testing/Code/BasicFilters/itkMinimumImageFilterTest
ENH: Added operator== and operator!=.

Testing/Code/BasicFilters/itkModulusImageFilterTest
ENH: new tests contributed by Gaetan Lehmann via the Insight Journal.

Testing/Code/BasicFilters/itkMorphologicalGradientImageFilterTest
STYLE: missing copyright.

Testing/Code/BasicFilters/itkMultiplyImageFilterTest
ENH: Added operator== and operator!=.

Testing/Code/BasicFilters/itkNaryAddImageFilterTest
ENH: Added operator== and operator!=.

Testing/Code/BasicFilters/itkNaryMaximumImageFilterTest
ENH: Added operator== and operator!=.

Testing/Code/BasicFilters/itkNotImageFilterTest
ENH: new test.

Testing/Code/BasicFilters/itkOpeningByReconstructionImageFilterTest
ENH: Added SimpleFilterWatcher.
ENH: added optional difference image.
ENH: new regression test.

Testing/Code/BasicFilters/itkOrImageFilterTest
ENH: Added operator== and operator!=.

Testing/Code/BasicFilters/itkPushPopTileImageFilterTest
ENH: new test

Testing/Code/BasicFilters/itkRGBToLuminanceImageFilterAndAdaptorTest
ENH: Added operator== and operator!=.

Testing/Code/BasicFilters/itkRecursiveGaussianImageFiltersOnTensorsTest
STYLE: missing copyright.

Testing/Code/BasicFilters/itkRegionOfInterestImageFilterTest
ENH: Added filter watcher. Now uses OrientedImage.

Testing/Code/BasicFilters/itkRescaleIntensityImageFilterTest
ENH: Added operator== and operator!=.

Testing/Code/BasicFilters/itkScalarConnectedComponentImageFilterTest
ENH: Added operator== and operator!=.

Testing/Code/BasicFilters/itkSigmoidImageFilterTest
ENH: Added operator== and operator!=.

Testing/Code/BasicFilters/itkSinImageFilterAndAdaptorTest
ENH: Added operator== and operator!=.

Testing/Code/BasicFilters/itkSqrtImageFilterAndAdaptorTest
ENH: Added operator== and operator!=.

Testing/Code/BasicFilters/itkSquareImageFilterTest
ENH: Added operator== and operator!=.

Testing/Code/BasicFilters/itkSquaredDifferenceImageFilterTest
ENH: Added operator== and operator!=.

Testing/Code/BasicFilters/itkSubtractImageFilterTest
ENH: Added operator== and operator!=.

Testing/Code/BasicFilters/itkSymmetricEigenAnalysisImageFilterTest
ENH: Added operator== and operator!=.

Testing/Code/BasicFilters/itkTanImageFilterAndAdaptorTest
ENH: Added operator== and operator!=.

Testing/Code/BasicFilters/itkTensorFractionalAnisotropyImageFilterTest
ENH: Added operator== and operator!=.

Testing/Code/BasicFilters/itkTensorRelativeAnisotropyImageFilterTest
ENH: Added operator== and operator!=.

Testing/Code/BasicFilters/itkTernaryMagnitudeImageFilterTest
ENH: Added operator== and operator!=.

Testing/Code/BasicFilters/itkTernaryMagnitudeSquaredImageFilterTest
ENH: new test.

Testing/Code/BasicFilters/itkThresholdLabelerImageFilterTest
ENH: Added operator== and operator!=.

Testing/Code/BasicFilters/itkTileImageFilterTest
ENH: now uses OrientedImage.

Testing/Code/BasicFilters/itkVectorConnectedComponentImageFilterTest
ENH: Added operator== and operator!=.

Testing/Code/BasicFilters/itkVectorRescaleIntensityImageFilterTest
ENH: Added operator== and operator!=.

Testing/Code/BasicFilters/itkVotingBinaryIterativeHoleFillingImageFilterTest
ENH: PrintSelf coverage.

Testing/Code/BasicFilters/itkWeightedAddImageFilterTest
ENH: Added operator== and operator!=.

Testing/Code/BasicFilters/itkXorImageFilterTest
ENH: Added operator== and operator!=.

Testing/Code/Common/CMakeLists.txt
BUG: 2769. SetParameters() are missing invocation of Modified().

Testing/Code/Common/itkCommonTests2
BUG: 2769. SetParameters() are missing invocation of Modified().

Testing/Code/Common/itkCovariantVectorGeometryTest
COMP: must use namespace on funciton call.

Testing/Code/Common/itkEuler2DTransformTest

Testing/Code/Common/itkMeshSourceGraftOutputTest
ENH: added a test for graft output method in mesh source

Testing/Code/Common/itkRealTimeClockTest
ENH: rename GetTimestamp into GetTimeStamp

Testing/Code/Common/itkTransformsSetParametersTest
COMP: Remove warning
BUG: 2769. SetParameters() are missing invocation of Modified().

Testing/Code/Common/itkVectorImageTest
ENH: Make DefaultConvertPixelTraits a trait of the image to make IO support of VectorImage consistent. Forward declare it so it doesn't increase parsing time.

Testing/Code/Common/itkVersorTest

Testing/Code/IO/CMakeLists.txt

Testing/Code/IO/itkBMPImageIOTest
ENH: better exception reporting.

Testing/Code/IO/itkGDCMSeriesReadImageWrite
ENH: Add more example on how to use restriction operation

Testing/Code/IO/itkIOTests

Testing/Code/IO/itkMeshSpatialObjectIOTest
ENH: Now testing the ID of the MeshSpatialObject

Testing/Code/IO/itkRawImageIOTest5
ENH: Adding setup code for the RawImageIO object.

Testing/Code/Numerics/NeuralNetworks/CMakeLists.txt
COMP: avoid Borland linker errors.

Testing/Code/Numerics/NeuralNetworks/itkNeuralNetworkTests
COMP: avoid Borland linker errors.

Testing/Code/Numerics/NeuralNetworks/itkNeuralNetworkTests3
COMP: avoid Borland linker errors.

Testing/Code/Review/CMakeLists.txt
ENH: Adding a second test for the itkThresholdMaximumConnectedComponentsImageFilter.
ENH: Adding returns FAILURE in the catch blocks of the tries.

Testing/Code/Review/README.txt
ENH: Notice describing the purpose of this directory.

Testing/Code/Review/itkReviewHeaderTest
ENH: Support files for testing the classes that are under the review process.

Testing/Code/Review/itkReviewPrintTest
ENH: Support files for testing the classes that are under the review process.

Testing/Code/Review/itkReviewTests
COMP: Fixing the connections for the test driver.

Testing/Code/Review/itkThresholdMaximumConnectedComponentsImageFilterTest
ENH: Fixing the configuration of the test for using the input and baseline images.
COMP: Fixing the connections for the test driver.

Testing/Data/Baseline/BasicFilters/ClosingByReconstructionImageFilterTest.png
BUG: StructuringElement was uninitialized.

Testing/Data/Baseline/BasicFilters/ClosingByReconstructionImageFilterTest2.png
ENH: new regression test.

Testing/Data/Baseline/BasicFilters/InvertIntensityImageFilterTest.png
ENH: new regression test.

Testing/Data/Baseline/BasicFilters/MaskNeighborhoodOperatorImageFilterTest.png
ENH: new regression test.

Testing/Data/Baseline/BasicFilters/MatrixIndexSelectionImageFilterTest.png
ENH: added

Testing/Data/Baseline/BasicFilters/ModulusImageFilterTest.png
ENH: new regression test.

Testing/Data/Baseline/BasicFilters/MorphologicalGradientImageFilterTest.png
ENH: new regression test.

Testing/Data/Baseline/BasicFilters/OpeningByReconstructionImageFilterTest.png
BUG: StructuringElement was uninitialized.

Testing/Data/Baseline/BasicFilters/OpeningByReconstructionImageFilterTest2.png
ENH: new regression test.

Testing/Data/Baseline/BasicFilters/PushPopTileImageFilterTest.png

Testing/Data/Baseline/BasicFilters/VectorConnectedComponentImageFilterTest.png
ENH: new regression test.

Testing/Data/Baseline/Filtering/FACorpusCallosum.mhd
ENH: Fractional Anisotropy baseline for DiffusionTensor3DReconstructionImageFilterTest

Testing/Data/Baseline/Filtering/FACorpusCallosum.raw
ENH: Fractional Anisotropy baseline for DiffusionTensor3DReconstructionImageFilterTest

Testing/Data/Baseline/Filtering/RACorpusCallosum.mhd
ENH: Relative Anisotropy baseline for DiffusionTensor3DReconstructionImageFilterTest

Testing/Data/Baseline/Filtering/RACorpusCallosum.raw
ENH: Relative Anisotropy baseline for DiffusionTensor3DReconstructionImageFilterTest

Testing/Data/Baseline/Filtering/ResampleImageFilter9Test.1.png
ENH: baseline for Borland.

Testing/Data/Baseline/Filtering/ResampleImageFilter9Test.png
private/insight-developers/2006-February/007646.html

Testing/Data/Baseline/Registration/DeformableRegistration3Test.5.png
ENH: baseline for solaris, darwin and sgi.

Testing/Data/Baseline/Registration/DeformableRegistration5Test.6.png
ENH: baseline for ICC8.0

Testing/Data/Baseline/Review/itkThresholdMaximumConnectedComponentsImageFilterTest1.png
ENH: Baseline image for the itkThresholdMaximumConnectedComponentsImageFilterTest1.

Testing/Data/Baseline/Review/itkThresholdMaximumConnectedComponentsImageFilterTest2.png
ENH: Baseline for the itkThresholdMaximumConnectedComponentsImageFilterTest2.

Testing/Data/Baseline/Statistics/BayesianClassifierInitializerClass2Output.png

Testing/Data/Baseline/Statistics/BayesianClassifierLabelMap.png

Testing/Data/Input/012345.002.050.README
ENH: Fix comment

Testing/Data/Input/CellsFluorescence1.png
ENH: Input test image for the threshold maximum connected components filter test.

Testing/Data/Input/CellsFluorescence2.png
ENH: Input image for the ThresholdMaximumConnectedComponentsImageFilterTest2.

Testing/Data/Input/DwiCorpusCallosum.nhdr
namic/DTI/Data/dwi.nhdr ftp://public.kitware.com/pub/namic/DTI/Data/dwi.img.gz (gunzip this)

Testing/Data/Input/DwiCorpusCallosum.raw
namic/DTI/Data/dwi.nhdr ftp://public.kitware.com/pub/namic/DTI/Data/dwi.img.gz (gunzip this)

Testing/Data/Input/TensorsCorpusCallosum.mhd

Testing/Data/Input/TensorsCorpusCallosum.raw

Testing/Data/Input/chondt.png
ENH: new input data.

Testing/Data/Input/closerec1.jpg
ENH: new input data.

Utilities/CMakeLists.txt
ENH: enable kwsys command line processing.
ENH: Properly handle library prefix. Also backport from openjpeg CVS to support mingw

Utilities/Dart/CMakeLists.txt
ENH: Added a script to generate a Wiki-compatible file to show new files between two dates.

Utilities/Dart/NewSince.csh.in
ENH: Add the range of dates covered by the release.
ENH: Added a script to generate a Wiki-compatible file to show new files between two dates.

Utilities/Dart/NewSince.gawk
ENH: Added a script to generate a Wiki-compatible file to show new files between two dates.

Utilities/Doxygen/cvsVersionFilter.

Utilities/Doxygen/doxygen.config.in
BUG: Address bug 2733.. For some reason, setting UML_LOOK to ON fails to generate full class inheritence diagrams. It only shows the first level of inheritence
ENH: Updating the configuration from Doxygen 1.1.4 to Doxygen 1.4.3

Utilities/MetaIO/metaCommand
ENH: Added SetOptionComplete() function

Utilities/MetaIO/metaEllipse
ENH: Bring AddRestriction from the gdcm level to the itkGDCM level. Update example to show usage, add more doc.

Utilities/MetaIO/metaImage
ENH: Bring AddRestriction from the gdcm level to the itkGDCM level. Update example to show usage, add more doc.

Utilities/MetaIO/metaMe
COMP: warnings.

Utilities/MetaIO/metaMesh
BUG: Now reading PointData and CellData correctly

Utilities/MetaIO/metaObject
BUG: MetaIO now supports 64bit int on platforms having 64bit ints. Thanks to help from Robert Atwood at imperial.ac.uk

Utilities/MetaIO/metaTypes
BUG: MetaIO now supports 64bit int on platforms having 64bit ints. Thanks to help from Robert Atwood at imperial.ac.uk

Utilities/MetaIO/metaUtils
BUG: More instances of unsigned __int64 conversion problems on vs6
BUG: MS-VS6 does not support writing __int64 using ostream <<

Utilities/MetaIO/metaUtils
BUG: MetaIO now supports 64bit int on platforms having 64bit ints. Thanks to help from Robert Atwood at imperial.ac.uk

Utilities/expat/expatConfig.h.in

Utilities/expat/xmlparse

Utilities/expat/xmlrole

Utilities/expat/xmltok

Utilities/expat/xmltok_impl

Utilities/gdcm/AUTHORS
ENH: Update gdcm version to 1.2

Utilities/gdcm/CMakeLists.txt
COMP: Fix compilation on win32 with static on
STYLE: Typo

Utilities/gdcm/ChangeLog
ENH: Update gdcm version to 1.2

Utilities/gdcm/README
ENH: Update gdcm version to 1.2

Utilities/gdcm/gdcmConfigure.h.in
COMP: Fix compilation on win32 with static on

Utilities/gdcm/CMake/CTestCustom.ctest.in
ENH: Update gdcm version to 1.2

Utilities/gdcm/CMake/FindDicom3Tools.cmake
ENH: Update gdcm version to 1.2

Utilities/gdcm/CMake/FindRsync.cmake
ENH: Update gdcm version to 1.2

Utilities/gdcm/CMake/gdcmTestFUNCTION
ENH: Update gdcm version to 1.2

Utilities/gdcm/Dicts/ACUSON.d
ENH: Update gdcm version to 1.2

Utilities/gdcm/Dicts/CMakeLists.txt
ENH: Update gdcm version to 1.2

Utilities/gdcm/Dicts/DicomDir.d
ENH: Update gdcm version to 1.2

Utilities/gdcm/Dicts/DictGroupName.d
ENH: Update gdcm version to 1.2

Utilities/gdcm/Dicts/ELSCINT.d
ENH: Update gdcm version to 1.2

Utilities/gdcm/Dicts/GE-EchoPAC.d
ENH: Update gdcm version to 1.2

Utilities/gdcm/Dicts/GEMS-Advance.d
ENH: Update gdcm version to 1.2

Utilities/gdcm/Dicts/GEMS-Advantx.d
ENH: Update gdcm version to 1.2

Utilities/gdcm/Dicts/GEMS-CR.d
ENH: Update gdcm version to 1.2

Utilities/gdcm/Dicts/GEMS-DLX.d
ENH: Update gdcm version to 1.2

Utilities/gdcm/Dicts/GEMS-Genie.d
ENH: Update gdcm version to 1.2

Utilities/gdcm/Dicts/GEMS-HiSpeed.d
ENH: Update gdcm version to 1.2

Utilities/gdcm/Dicts/GEMS-Infinia.d
ENH: Update gdcm version to 1.2

Utilities/gdcm/Dicts/GEMS.d
ENH: Update gdcm version to 1.2

Utilities/gdcm/Dicts/HITACHI-MR-pronto.d
ENH: Update gdcm version to 1.2

Utilities/gdcm/Dicts/NIH.d
ENH: Update gdcm version to 1.2

Utilities/gdcm/Dicts/PHILIPS-EasyVision.d
ENH: Update gdcm version to 1.2

Utilities/gdcm/Dicts/PHILIPS-Intera.d
ENH: Update gdcm version to 1.2

Utilities/gdcm/Dicts/Papyrus.d
ENH: Update gdcm version to 1.2

Utilities/gdcm/Dicts/ParseDict.py
ENH: Update gdcm version to 1.2

Utilities/gdcm/Dicts/README
ENH: Update gdcm version to 1.2

Utilities/gdcm/Dicts/SIEMENS-syngo.d
ENH: Update gdcm version to 1.2

Utilities/gdcm/Dicts/SIEMENS.d
ENH: Update gdcm version to 1.2

Utilities/gdcm/Dicts/SPI.d
ENH: Update gdcm version to 1.2

Utilities/gdcm/Dicts/dicomTS.d
ENH: Update gdcm version to 1.2

Utilities/gdcm/Dicts/dicomV3.d
ENH: changed VR of some tags from US to SS to permit signed shorts.

Utilities/gdcm/Dicts/gdcm.dic.in
ENH: Update gdcm version to 1.2

Utilities/gdcm/src/CMakeLists.txt
ENH: Update gdcm version to 1.2

Utilities/gdcm/src/gdcm
ENH: Backport gdcm1.2 to ITK-gdcm

Utilities/gdcm/src/gdcmArgMgr
ENH: Backport gdcm1.2 to ITK-gdcm

Utilities/gdcm/src/gdcmBase
ENH: Backport gdcm1.2 to ITK-gdcm

Utilities/gdcm/src/gdcmBinEntry
COMP: Fix compilation on SunOS
ENH: Update gdcm version to 1.2

Utilities/gdcm/src/gdcmBinEntry
ENH: Backport gdcm1.2 to ITK-gdcm

Utilities/gdcm/src/gdcmCommon
ENH: Backport gdcm1.2 to ITK-gdcm

Utilities/gdcm/src/gdcmContentEntry
ENH: Backport gdcm1.2 to ITK-gdcm

Utilities/gdcm/src/gdcmDebug
ENH: Backport gdcm1.2 to ITK-gdcm

Utilities/gdcm/src/gdcmDebug
COMP: Fix compilation on SunOS
ENH: Update gdcm version to 1.2

Utilities/gdcm/src/gdcmDefaultDicts.cxx.in
ENH: Backport gdcm1.2 to ITK-gdcm

Utilities/gdcm/src/gdcmDicomDir
COMP: Fix compilation on SunOS
ENH: Update gdcm version to 1.2

Utilities/gdcm/src/gdcmDicomDir
ENH: Backport gdcm1.2 to ITK-gdcm

Utilities/gdcm/src/gdcmDicomDirElement
COMP: Fix compilation on SunOS
ENH: Update gdcm version to 1.2

Utilities/gdcm/src/gdcmDicomDirElement
ENH: Backport gdcm1.2 to ITK-gdcm

Utilities/gdcm/src/gdcmDicomDirImage
ENH: Backport gdcm1.2 to ITK-gdcm

Utilities/gdcm/src/gdcmDicomDirMeta
ENH: Backport gdcm1.2 to ITK-gdcm

Utilities/gdcm/src/gdcmDicomDirObject
ENH: Backport gdcm1.2 to ITK-gdcm

Utilities/gdcm/src/gdcmDicomDirPatient
ENH: Backport gdcm1.2 to ITK-gdcm

Utilities/gdcm/src/gdcmDicomDirSerie
ENH: Backport gdcm1.2 to ITK-gdcm

Utilities/gdcm/src/gdcmDicomDirStudy
ENH: Backport gdcm1.2 to ITK-gdcm

Utilities/gdcm/src/gdcmDicomDirVisit
ENH: Backport gdcm1.2 to ITK-gdcm

Utilities/gdcm/src/gdcmDict
COMP: Fix compilation on SunOS
ENH: Update gdcm version to 1.2

Utilities/gdcm/src/gdcmDict
ENH: Backport gdcm1.2 to ITK-gdcm

Utilities/gdcm/src/gdcmDictEntry
COMP: Fix compilation on SunOS
ENH: Update gdcm version to 1.2

Utilities/gdcm/src/gdcmDictEntry
COMP: Fix warning
ENH: Update gdcm version to 1.2

Utilities/gdcm/src/gdcmDictGroupName
COMP: Fix compilation on SunOS
ENH: Update gdcm version to 1.2

Utilities/gdcm/src/gdcmDictGroupName
ENH: Backport gdcm1.2 to ITK-gdcm

Utilities/gdcm/src/gdcmDictSet
ENH: Backport gdcm1.2 to ITK-gdcm

Utilities/gdcm/src/gdcmDirList
ENH: Backport gdcm1.2 to ITK-gdcm

Utilities/gdcm/src/gdcmDocEntry
COMP: Fix compilation on SunOS
ENH: Update gdcm version to 1.2

Utilities/gdcm/src/gdcmDocEntry
COMP: Fix warning
ENH: Update gdcm version to 1.2

Utilities/gdcm/src/gdcmDocEntryArchive
ENH: Backport gdcm1.2 to ITK-gdcm

Utilities/gdcm/src/gdcmDocEntrySet
ENH: Backport gdcm1.2 to ITK-gdcm

Utilities/gdcm/src/gdcmDocument
COMP: Fix compilation on SunOS
ENH: Update gdcm version to 1.2

Utilities/gdcm/src/gdcmDocument
ENH: Backport gdcm1.2 to ITK-gdcm
COMP: Please a vendor specific compiler to work around deprecated method and virtual overload

Utilities/gdcm/src/gdcmElementSet
ENH: Backport gdcm1.2 to ITK-gdcm

Utilities/gdcm/src/gdcmException
ENH: Backport gdcm1.2 to ITK-gdcm

Utilities/gdcm/src/gdcmFile
COMP: Fix compilation on SunOS
ENH: This should fix the LEGACY code

Utilities/gdcm/src/gdcmFile
ENH: Backport gdcm1.2 to ITK-gdcm

Utilities/gdcm/src/gdcmFileHelper
ENH: Properly set some default value: IOP (default to 100010), and Patient Orientation which is redundant...
BUG: removed old secondary capture logic.

ENH: Backport gdcm1.2 to ITK-gdcm
BUG: should not remove Frame Of Reference UID.

Utilities/gdcm/src/gdcmFileHelper
ENH: Backport gdcm1.2 to ITK-gdcm

Utilities/gdcm/src/gdcmGlobal
ENH: Backport gdcm1.2 to ITK-gdcm

Utilities/gdcm/src/gdcmJPEGFragment
ENH: Backport gdcm1.2 to ITK-gdcm

Utilities/gdcm/src/gdcmJPEGFragmentsInfo
ENH: Backport gdcm1.2 to ITK-gdcm

Utilities/gdcm/src/gdcmJpeg
ENH: Backport gdcm1.2 to ITK-gdcm

Utilities/gdcm/src/gdcmJpeg12
ENH: Backport gdcm1.2 to ITK-gdcm

Utilities/gdcm/src/gdcmJpeg16
ENH: Backport gdcm1.2 to ITK-gdcm

Utilities/gdcm/src/gdcmJpeg2000
ENH: In ITK openjpeg is outside
COMP: Fix warning on bcc551

Utilities/gdcm/src/gdcmJpeg8
ENH: Backport gdcm1.2 to ITK-gdcm

Utilities/gdcm/src/gdcmJpegLS
ENH: Backport gdcm1.2 to ITK-gdcm

Utilities/gdcm/src/gdcmMpeg
ENH: Backport gdcm1.2 to ITK-gdcm

Utilities/gdcm/src/gdcmOrientation
ENH: Backport gdcm1.2 to ITK-gdcm

Utilities/gdcm/src/gdcmPixelReadConvert
ENH: Backport gdcm1.2 to ITK-gdcm

Utilities/gdcm/src/gdcmPixelWriteConvert
ENH: Backport gdcm1.2 to ITK-gdcm

Utilities/gdcm/src/gdcmRLEFrame
ENH: Backport gdcm1.2 to ITK-gdcm

Utilities/gdcm/src/gdcmRLEFramesInfo
ENH: Backport gdcm1.2 to ITK-gdcm

Utilities/gdcm/src/gdcmSQItem
COMP: Fix compilation on SunOS
ENH: Update gdcm version to 1.2

Utilities/gdcm/src/gdcmSQItem
ENH: Backport gdcm1.2 to ITK-gdcm

Utilities/gdcm/src/gdcmSeqEntry
ENH: Backport gdcm1.2 to ITK-gdcm

Utilities/gdcm/src/gdcmSerieHelper
ENH: Redo implementation to use Functor instead of Function, because of brain damage VS6. See Q240871
ENH: Backport gdcm1.2 to ITK-gdcm
ENH: Factor code into one single function
BUG: Clear was incomplete and was not deleting the coherent file list. Thanks to Patrick Cheng for bug report and patch
BUG: Could not reuse gdcmSerieHelper, now can call Clear before hand

Utilities/gdcm/src/gdcmSerieHelper
ENH: Redo implementation to use Functor instead of Function, because of brain damage VS6. See Q240871
COMP: Fix compilation on bcc
ENH: Provide backward compatibility
ENH: Update gdcm version to 1.2

Utilities/gdcm/src/gdcmTS
COMP: Fix compilation on SunOS
ENH: Update gdcm version to 1.2

Utilities/gdcm/src/gdcmTS
ENH: Backport gdcm1.2 to ITK-gdcm

Utilities/gdcm/src/gdcmUtil
COMP: Fix compilation on SunOS
BUG: wrong value for FMIV.
COMP: Get Mac Address on SGI Irix

Utilities/gdcm/src/gdcmUtil
ENH: Backport gdcm1.2 to ITK-gdcm

Utilities/gdcm/src/gdcmVR
ENH: Backport gdcm1.2 to ITK-gdcm

Utilities/gdcm/src/gdcmValEntry
COMP: Fix compilation on SunOS
ENH: Update gdcm version to 1.2

Utilities/gdcm/src/gdcmValEntry
ENH: Backport gdcm1.2 to ITK-gdcm

Utilities/gdcm/src/gdcmValidator
COMP: Fix compilation on SunOS
ENH: In order to sync with official CVS, remove as much ITKism as possible
ENH: Update gdcm version to 1.2

Utilities/gdcm/src/gdcmValidator
ENH: Backport gdcm1.2 to ITK-gdcm

Utilities/gdcm/src/jdatadst
ENH: Backport gdcm1.2 to ITK-gdcm

Utilities/gdcm/src/jdatas
ENH: Backport gdcm1.2 to ITK-gdcm

Utilities/kwsys/CMakeLists.txt
BUG: Fix problem with in the path
BUG: Fix DynamicLoader implementation on MacOSX (using old API)
COMP: Fix cygwin build
ENH: Carefully turn testing of DynamicLib on
ENH: Added kwsys::String class to shorten debugging symbols and error messages involving std::string.

Utilities/kwsys/CommandLineArguments
ENH: Add a method to remove remaining arguments

Utilities/kwsys/CommandLineArguments.hxx.in
ENH: Add a method to remove remaining arguments

Utilities/kwsys/Directory
STYLE: Minor style
COMP: Some STL implementation do not provide clear on std::string
ENH: Redo implementation of itkDirectory to use kwsys (avoid duplicating code).

Utilities/kwsys/Directory.hxx.in
BUG: Need to reset internal structure in case of multiple calls to Load

Utilities/kwsys/DynamicLoader
BUG: Fix DynamicLoader implementation on MacOSX (using old API)
ENH: Hopefully have the DynamicLoader to the proper thing.
BUG: Including file within a namespace{} is dangerous(unless symbols are within an extern C). Also update documentation about special case for MacOSX
ENH: Adding kwsys implementation for a DynamicLoader class. Copy from itkDynamicLoader, with patch from cmDynamicLoader

Utilities/kwsys/DynamicLoader.hxx.in
ENH: Add documentation on the problem with system wide path for looking up dynamic libraries. STYLE: Fix trailing white spaces
ENH: Adding kwsys implementation for a DynamicLoader class. Copy from itkDynamicLoader, with patch from cmDynamicLoader

Utilities/kwsys/EncodeExecutable
ENH: add support for watcom wmake and wcl386

Utilities/kwsys/Glob
STYLE: Make sure to use the proper cast.
ENH: add support for watcom wmake and wcl386

Utilities/kwsys/Glob.hxx.in
COMP: Fix the exporting so that it can actually be used

Utilities/kwsys/ProcessUNIX
ENH: Enabled process tree killing on AIX.
ENH: Enabled process tree killing for FreeBSD and Sun.
BUG: Do not leak ps FILE when the process starts but reading the header fails.
BUG: When more than one command is given and one of them fails to start and the rest are killed, do not forget to reap the killed children.

Utilities/kwsys/ProcessWin32
COMP: Fixed warnings for Borland 5.8.
ENH: Improved robustness of sharing parent pipes with children. This ensures that the parent pipe handles are inherited by the children. If a parent pipe handle is invalid a handle to an empty pipe is given to the child to make sure all pipes are defined for the children.

Utilities/kwsys/Registry
STYLE: Make sure to use the proper cast.
ENH: add missing cmake depend hacks
ENH: check in new find stuff

Utilities/kwsys/Registry.hxx.in
STYLE: Minor style

Utilities/kwsys/RegularExpression
STYLE: Make sure to use the proper cast.

Utilities/kwsys/String.hxx.in
ENH: Added kwsys::String class to shorten debugging symbols and error messages involving std::string.

Utilities/kwsys/SystemTools
ENH: undo last change because it broke the dashboard
STYLE: Remove trailing whitespaces
ENH: fix std in kwsys, has to be kwsys_stl
ENH: fix for bug 28618, cmake.exe can not find itself
COMP: Fix compile problem on windows and mac
ENH: Move relative path to kwsys
ENH: add support for watcom wmake and wcl386
BUG: Return if the file is in any directory not just in first one
ENH: Add another signature to FindProgram that matches more to the one from CMake

Utilities/kwsys/SystemTools.hxx.in
ENH: Add documentation on the problem with system wide path for looking up dynamic libraries. STYLE: Fix trailing white spaces
ENH: Move relative path to kwsys
ENH: fix for icc
ENH: Add another signature to FindProgram that matches more to the one from CMake

Utilities/kwsys/kwsysPlatformCxxTests
ENH: add support for watcom wmake and wcl386

Utilities/kwsys/testCommandLineArguments
STYLE: Make sure to use the proper cast.

Utilities/kwsys/testDynamicLoader

BUG: Need a trailing slash
BUG: Trying to get testDynamicLoader to work on Solaris and SunOS, where current directory is not lookup when doing dlopen
ENH: Hopefully have the DynamicLoader to the proper thing.
COMP: Add missing include
ENH: Still more coverage of the DynamicLoader
ENH: Adding initial test for DynamicLoader

Utilities/kwsys/testDynload
COMP: Fix compilation on MacOSX (common symbols not allowed with MH_DYLIB output format)
ENH: remove test temporarily

Utilities/kwsys/testProcess
ENH: Added a way to quickly enable manual testing of grandchild killing.

Utilities/kwsys/testRegistry
ENH: add support for watcom wmake and wcl386

Utilities/kwsys/testSystemTools
STYLE: Minor style

Utilities/kwsys/testSystemTools.h.in
BUG: Do the proper path
BUG: Trying to get testDynamicLoader to work on Solaris and SunOS, where current directory is not lookup when doing dlopen

Utilities/nifti/Testing/niftilib/nifti_test

Utilities/nifti/examples/CMakeLists.txt

Utilities/nifti/examples/fsl_api_driver

Utilities/nifti/fsliolib/fslio

Utilities/nifti/niftilib/nifti1_io
COMP: warnings.

Utilities/nifti/niftilib/nifti1_io

Utilities/nifti/utils/CMakeLists.txt

Utilities/nifti/utils/nifti_stats

Utilities/nifti/utils/nifti_tool

Utilities/openjpeg/.NoDartCoverage
ENH: Adding a JPEG2000 implementation (OpenJPEG) from Communications and remote sensing Laboratory, Universite catholique de Louvain

Utilities/openjpeg/CMakeLists.txt
ENH: Update openjpeg to match the one in gdcm 1.2. COMP: This should fix problem introduced yesterday
ENH: Update openjpeg lib from CVS (Fixes lots of warnings)
ENH: This is a C only project

Utilities/openjpeg/README.ITK.txt
ENH: Add a note for ITK-OpenJPEG

Utilities/openjpeg/bio
ENH: Adding a JPEG2000 implementation (OpenJPEG) from Communications and remote sensing Laboratory, Universite catholique de Louvain

Utilities/openjpeg/cio
ENH: Backport from openjpeg CVS, even more warnings fixes. Change the build system from def file to declspec

Utilities/openjpeg/cio
ENH: Adding a JPEG2000 implementation (OpenJPEG) from Communications and remote sensing Laboratory, Universite catholique de Louvain

Utilities/openjpeg/dwt
ENH: Adding a JPEG2000 implementation (OpenJPEG) from Communications and remote sensing Laboratory, Universite catholique de Louvain

Utilities/openjpeg/event
ENH: Backport from openjpeg CVS, even more warnings fixes. Change the build system from def file to declspec
ENH: Adding a JPEG2000 implementation (OpenJPEG) from Communications and remote sensing Laboratory, Universite catholique de Louvain

Utilities/openjpeg/event
ENH: Adding a JPEG2000 implementation (OpenJPEG) from Communications and remote sensing Laboratory, Universite catholique de Louvain

Utilities/openjpeg/Attic/fix
ENH: Update openjpeg to match the one in gdcm 1.2. COMP: This should fix problem introduced yesterday
ENH: Adding a JPEG2000 implementation (OpenJPEG) from Communications and remote sensing Laboratory, Universite catholique de Louvain

Utilities/openjpeg/fix
ENH: Update openjpeg to match the one in gdcm 1.2. COMP: This should fix problem introduced yesterday

Utilities/openjpeg/image
ENH: Backport from openjpeg CVS, even more warnings fixes. Change the build system from def file to declspec

Utilities/openjpeg/image
ENH: Adding a JPEG2000 implementation (OpenJPEG) from Communications and remote sensing Laboratory, Universite catholique de Louvain

Utilities/openjpeg/Attic/int
ENH: Update openjpeg to match the one in gdcm 1.2. COMP: This should fix problem introduced yesterday

Utilities/openjpeg/int
ENH: Update openjpeg to match the one in gdcm 1.2. COMP: This should fix problem introduced yesterday

Utilities/openjpeg/j2k
ENH: Adding a JPEG2000 implementation (OpenJPEG) from Communications and remote sensing Laboratory, Universite catholique de Louvain

Utilities/openjpeg/j2k_lib
ENH: Adding a JPEG2000 implementation (OpenJPEG) from Communications and remote sensing Laboratory, Universite catholique de Louvain

Utilities/openjpeg/jp2
ENH: Update openjpeg lib from CVS (Fixes lots of warnings)

Utilities/openjpeg/jpt
ENH: Adding a JPEG2000 implementation (OpenJPEG) from Communications and remote sensing Laboratory, Universite catholique de Louvain

Utilities/openjpeg/mct
ENH: Adding a JPEG2000 implementation (OpenJPEG) from Communications and remote sensing Laboratory, Universite catholique de Louvain

Utilities/openjpeg/mqc
ENH: Adding a JPEG2000 implementation (OpenJPEG) from Communications and remote sensing Laboratory, Universite catholique de Louvain

Utilities/openjpeg/openjpeg
ENH: Backport from openjpeg CVS, even more warnings fixes. Change the build system from def file to declspec
ENH: Adding a JPEG2000 implementation (OpenJPEG) from Communications and remote sensing Laboratory, Universite catholique de Louvain

Utilities/openjpeg/Attic/openjpeg.def.in
ENH: Backport from openjpeg CVS, even more warnings fixes. Change the build system from def file to declspec

Utilities/openjpeg/openjpeg
ENH: Update openjpeg to match the one in gdcm 1.2. COMP: This should fix problem introduced yesterday
ENH: Backport from openjpeg CVS, even more warnings fixes. Change the build system from def file to declspec
ENH: Adding a JPEG2000 implementation (OpenJPEG) from Communications and remote sensing Laboratory, Universite catholique de Louvain

Utilities/openjpeg/opj_includes
ENH: Update openjpeg to match the one in gdcm 1.2. COMP: This should fix problem introduced yesterday

Utilities/openjpeg/pi
ENH: Update openjpeg lib from CVS (Fixes lots of warnings)

Utilities/openjpeg/pi
ENH: Adding a JPEG2000 implementation (OpenJPEG) from Communications and remote sensing Laboratory, Universite catholique de Louvain

Utilities/openjpeg/raw
ENH: Adding a JPEG2000 implementation (OpenJPEG) from Communications and remote sensing Laboratory, Universite catholique de Louvain

Utilities/openjpeg/t1
ENH: Update openjpeg lib from CVS (Fixes lots of warnings)

Utilities/openjpeg/t1
ENH: Adding a JPEG2000 implementation (OpenJPEG) from Communications and remote sensing Laboratory, Universite catholique de Louvain

Utilities/openjpeg/t2
ENH: Backport from openjpeg CVS, even more warnings fixes. Change the build system from def file to declspec

Utilities/openjpeg/t2
ENH: Adding a JPEG2000 implementation (OpenJPEG) from Communications and remote sensing Laboratory, Universite catholique de Louvain

Utilities/openjpeg/tcd
ENH: Backport from openjpeg CVS, even more warnings fixes. Change the build system from def file to declspec
ENH: Adding a JPEG2000 implementation (OpenJPEG) from Communications and remote sensing Laboratory, Universite catholique de Louvain

Utilities/openjpeg/tcd
ENH: Adding a JPEG2000 implementation (OpenJPEG) from Communications and remote sensing Laboratory, Universite catholique de Louvain

Utilities/openjpeg/tgt
ENH: Adding a JPEG2000 implementation (OpenJPEG) from Communications and remote sensing Laboratory, Universite catholique de Louvain

Utilities/tiff/itk_tiff_mangle
BUG: More external symbols need to be mangled.
COMP: Enabling mangling

Utilities/tiff/tif_dir
COMP: Enabling mangling

Utilities/tiff/tif_dirread
COMP: Enabling mangling

Utilities/tiff/tif_dirwrite
COMP: Enabling mangling

Utilities/tiff/tif_swab
COMP: Enabling mangling

Utilities/tiff/tiff
COMP: force to make tiff rebuild.
COMP: Enabling mangling
COMP: Missing include to itk_tiff_mangle.h

Utilities/vxl/vcl/CMakeLists.txt
STYLE: Removed code with incompatible license.

Utilities/vxl/vcl/vcl_string
STYLE: Removed code with incompatible license.

Utilities/vxl/vcl/emulation/vcl_algobase
STYLE: Removed code with incompatible license.

Utilities/vxl/vcl/emulation/Attic/vcl_straits
STYLE: Removed code with incompatible license.

Utilities/vxl/vcl/emulation/Attic/vcl_string
STYLE: Removed code with incompatible license.

Utilities/zlib/zlib.def
ENH: Fix name

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