TubeTK/Documentation/EnhanceTubesUsingDiffusion

  Description: Compute vesselness score of an image using Frangi's
  method.

USAGE:

  ./EnhanceTubesUsingDiffusion  [--returnparameterfile <std::string>]
                                [--processinformationaddress
                                <std::string>] [--xml] [--echo] [-s
                                <double>] [-w <double>] [-e <double>] [-g
                                <double>] [-b <double>] [-r <int>]
                                [--iterations <int>] [--steps <int>]
                                [--max <double>] [--min <double>]
                                [--timestep <double>] [--] [--version]
                                [-h] <std::string> <std::string>

Where:

  --returnparameterfile <std::string>
    Filename in which to write simple return parameters (int, float,
    int-vector, etc.) as opposed to bulk return parameters (image,
    geometry, transform, measurement, table).

  --processinformationaddress <std::string>
    Address of a structure to store process information (progress, abort,
    etc.). (default: 0)

  --xml
    Produce xml description of command line arguments (default: 0)

  --echo
    Echo the command line arguments (default: 0)

  -s <double>,  --sensitivity <double>
    How sensitive the filter is. (default: 20)

  -w <double>,  --omega <double>
    Our omega value. (default: 25)

  -e <double>,  --epsilon <double>
    Our epsilon value. (default: 0.01)

  -g <double>,  --gamma <double>
    How sensitive the filter is to second order structureness. (default:
    5)

  -b <double>,  --beta <double>
    How sensitive the filter is to blobness. (default: 0.5)

  -r <int>,  --recalculate <int>
    How many iterations do we recalculate vesselness. (default: 11)

  --iterations <int>
    Number of iterations. (default: 50)

  --steps <int>
    Number of sigma steps. (default: 1)

  --max <double>
    Maximum sigma scale. (default: 1)

  --min <double>
    Minimum sigma scale. (default: 1)

  --timestep <double>
    Time Step. (default: 0.05)

  --,  --ignore_rest
    Ignores the rest of the labeled arguments following this flag.

  --version
    Displays version information and exits.

  -h,  --help
    Displays usage information and exits.

  <std::string>
    (required)  Input volume.

  <std::string>
    (required)  Blurred volume.

  Author(s): Patrick Reynolds (Kitware)

  Acknowledgements: This work is part of the TubeTK project at Kitware. It
  was funded by USC:EXPOSE and is an adaptation of the work of Hua Yang.