[Insight-developers] Possible problem after FFT changes

Jean-Christophe Fillion-Robin jchris.fillionr at kitware.com
Thu Jul 7 17:23:21 EDT 2011


My 2 cents, ITKv4 not being officially released yet. I don't think it's
major issue. Better fixing ITKv4 now than later ... :)

Jc

On Thu, Jul 7, 2011 at 5:02 PM, Bill Lorensen <bill.lorensen at gmail.com>wrote:

> I'll have to check further. It is too bad that such a simple change
> may cause our customers to spend time on this.
>
> It may be a few days before I can get to this....
>
> Bill
>
> On Thu, Jul 7, 2011 at 4:33 PM, Bradley Lowekamp <blowekamp at mail.nih.gov>
> wrote:
> > I went looking through the CMakeCache's and CMake config files, and I
> didn't
> > see ITK_LIBRARIES clearly defined or assembled any place. So I just added
> a
> > message in the top level CMakeLists.txt file for SimpleITK:
> > if(ITK_FOUND)
> >   include(${ITK_USE_FILE})
> > +  message( STATUS "ITK_LIBRARIES: ${ITK_LIBRARIES}" )
> > endif()
> > Produces:
> > ITK_LIBRARIES:
> >
> itksys;itkvnl_algo;itkvnl;itkv3p_netlib;ITK-Common;itkNetlibSlatec;ITK-Statistics;itkzlib;itkhdf5_cpp;itkhdf5;ITK-Transform;ITK-IO-Base;ITK-IO-BMP;ITKEXPAT;itkopenjpeg;gdcmDICT;gdcmMSFF;ITK-IO-GDCM;ITK-IO-GIPL;itkjpeg;ITK-IO-JPEG;ITKMetaIO;ITK-IO-Meta;ITKznz;ITKniftiio;ITK-IO-NIFTI;ITKNrrdIO;ITK-IO-NRRD;itkpng;ITK-IO-PNG;itktiff;ITK-IO-TIFF;ITK-IO-VTK;ITK-Mesh;ITK-SpatialObjects;ITK-Path;ITK-QuadEdgeMesh;ITK-Optimizers;ITK-Polynomials;ITK-BiasCorrection;ITK-BioCell;ITKDICOMParser;ITK-FEM;ITK-IO-BioRad;ITK-IO-IPL;ITK-IO-GE;ITK-IO-LSM;ITK-IO-Siemens;ITK-IO-XML;ITK-IO-SpatialObjects;ITK-IO-Stimulate;ITK-KLMRegionGrowing;ITK-VTK;ITK-Watersheds;ITK-Deprecated;ITK-IO-HDF5;ITK-Review
> > I am able to run SimpleITK's FFT example and tests too.
> > What is the output in Slicer? I am still suspicious, of some old
> information
> > someplace.
> > Brad
> > On Jul 7, 2011, at 4:15 PM, Bill Lorensen wrote:
> >
> > I cleaned my ITK and Slicer4 cache. I still get the same error.
> >
> >
> > On Thu, Jul 7, 2011 at 3:34 PM, Bill Lorensen <bill.lorensen at gmail.com>
> > wrote:
> >
> > I am not building with FFTW.
> >
> > I'll try clearing my cache.
> >
> > Bill
> >
> > On Thu, Jul 7, 2011 at 3:15 PM, Bradley Lowekamp <blowekamp at mail.nih.gov
> >
> > wrote:
> >
> > Bill,
> >
> > Yes, that is most definitely related to my change.
> >
> > Did you do a clean build? Are you building with FFTW?
> >
> > I suspect that there is an old CMake cache variable with the removed
> library
> > in it. My clean builds of ITK ( and dependent packages ) don't reference
> > ITK-FFT in ITK_LIBRARIES.
> >
> > Brad
> >
> > On Jul 7, 2011, at 3:00 PM, Bill Lorensen wrote:
> >
> > Brad,
> >
> > I updated my local ITK today and tried to build Slicer4.
> >
> > My Slicer4 build is failing with this error:
> >
> > /usr/bin/ld: cannot find -lITK-FFT
> >
> > I am using ${ITK_LIBRARIES}. I suspect this error is related to your
> >
> > recent merge.
> >
> > Bill
> >
> >
> >
> >
> > ========================================================
> >
> > Bradley Lowekamp
> >
> > Lockheed Martin Contractor for
> >
> > Office of High Performance Computing and Communications
> >
> > National Library of Medicine
> >
> > blowekamp at mail.nih.gov
> >
> >
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