[Insight-users] Problems while trying to compile the examples.

[Linglan Edwards]

Hi Mathieu,

I ran ccmake again and found that FLTKIMAGEVIEWER was not turned on. I changed 
that and all the Makefiles were generated.

Thanks,

Linglan
>Date: Mon, 15 Jul 2002 14:57:40 -0400
>From: Mathieu Malaterre <mmalat@imaging.robarts.ca>
>X-Accept-Language: fr, en
>MIME-Version: 1.0
>To: Linglan Edwards <linglan@nlm.nih.gov>
>CC: luis.ibanez@kitware.com, insight-users@public.kitware.com
>Subject: Re: [Insight-users] Problems while trying to compile the examples.
>Content-Transfer-Encoding: 7bit
>
>Hi Linglan,
>  You can have a look to : Insight/Example/CMakeLists.txt. You'll see that :
>
>      SUBDIRS(GaussianFilter)
>      SUBDIRS(ImageRegistration)
>
>will only be build if only 3 options have been enable in the main 
CMakeLists.txt
>(Insight/CMakeLists.txt)
>
>IF(HAS_METAIMAGE)
>  IF(HAS_FLTK)
>    IF(HAS_FLTKIMAGEVIEWER)
>
>Could you check if one of them is set to 'NO' in this CMakeLists.txt file?
>
>HTH
>Mathieu
>
>
>Linglan Edwards wrote:
>
>> Thanks Luis,
>>
>> I did run ccmake to the Insight directory first. But I noticed that in some
>> directories, (for example, in Examples/GaussianFilter,
>> Examples/ImageRegistration), no Makefile was generated. Does that mean it
>> couldn't find fltk or was it caused by something else? I have an older 
version
>> of fltk installed (fltk-1.0.11, the only version I was able to compile), 
would
>> that make any difference?
>>
>> Thanks,
>>
>> Linglan
>> >
>> >Hi Linglan,
>> >
>> >Some examples have dependencies that
>> >condition if they are built or not.
>> >
>> >For example, some of them require FLTK
>> >to be installed, some others require VTK.
>> >
>> >By enabling just Auxiliary and Examples it is to
>> >expect that not all the examples will be compiled.
>> >
>> >
>> >About the second group or errors that you posted:
>> >
>> >It is not a good idea to call ccmake in subdirectories.
>> >(e.g. in Insight/Examples) since CMake will navigate
>> >downstream in the directory tree but not into the
>> >parent directory.
>> >
>> >Please invoke "ccmake" in the top build directory
>> >and give the source directory as parameter.
>> >
>> >For example, I usually build Insight in:
>> >
>> >       ~/lib/Insight
>> >
>> >so, I cd to ~/lib/Insight and invoke
>> >
>> >       ccmake ~/src/Insight
>> >
>> >given that ~/src/Insight is where the sources are.
>> >
>> >Then, I can call "make" at any level of the
>> >directory tree.
>> >
>> >
>> >The invokation of ccmake in subdirectories will
>> >result in inconsistent Makefiles since most of
>> >the project-wide settings will not be available
>> >at the subdirectory level.
>> >
>> >
>> >Please let us know if that helps,
>> >
>> >
>> >    Thanks
>> >
>> >     Luis
>> >
>> >
>> >
>> >===================================================
>> >
>> >Linglan Edwards wrote:
>> >
>> > > Hi,
>> > >
>> > > I set the BUILD_AUXILIARY and BUILD_EXAMPLES on, and generated the
>> >make file. I
>> > > did a make. at various places including a lot of the examples, I got the
>> > > following kind of messages:
>> > >
>> > > ....
>> > > c++ -g -O2 -ftemplate-depth-50
>> > > -I/Development/ITK/Insight/Examples/MRIBiasCorrection
>> >-I/Development/ITK/Insight
>> > > -I/Development/ITK/Insight/Code/Numerics
>> >-I/Development/ITK/Insight/Code/Common
>> > > -I/Development/ITK/Insight/Code/IO
>> >-I/Development/ITK/Insight/Code/Numerics/vxl
>> > > -I/Development/ITK/Insight/Code/Numerics/vxl
>> > > -I/Development/ITK/Insight/Code/Numerics/vxl/vcl
>> > > -I/Development/ITK/Insight/Code/Numerics/vxl/vcl
>> > > -I/Development/ITK/Insight/Utilities/png
>> > > -I/Development/ITK/Insight/Utilities/zlib
>> > > -I/Development/ITK/Insight/Code/BasicFilters
>> > > -I/Development/ITK/Insight/Code/Algorithms
>> > > -I/Development/ITK/Insight/Code/Numerics/Statistics
>> > > -I/Development/ITK/Insight/Auxiliary/MetaImage
>> > > -I/Development/ITK/Insight/Examples/MRIBiasCorrection   -D_PTHREADS -c
>> > > /Development/ITK/Insight/Examples/MRIBiasCorrection/ImageCorrector -o
>> > > ImageCorrector.o
>> > > c++:
>> >/Development/ITK/Insight/Examples/MRIBiasCorrection/ImageCorrector: linker
>> > > input file unused since linking not done
>> > >
>> > > -------
>> > >
>> > > I found that a lot of the examples were not compiled. Then I went
>> >into the
>> > > ./Examples directory, did a ccmake, and then 'make', and got the
>> >following error
>> > > messages:
>> > > -------
>> > > c++  -g -O2 itkAntiAliasBinaryImageFilterExample.o /Code/Common
>> > > /Code/BasicFilters /Code/Algorithms /Code/Common /Code/IO
>> > > /Examples/StreamedWatershedSegmentation/ParameterFileParser
>> > >
>> 
>-L/Development/ITK/Insight/Examples/StreamedWatershedSegmentation/ParameterFile
>> P
>> > > arser -lVXLNumerics -lITKCommon -lITKBasicFilters -lCio -lm -lparam
>> > > -lITKBasicFilters -lITKCommon -lVXLNumerics -lITKIO -lVXLNumerics
>> >-lITKCommon
>> > > -lITKBasicFilters -lCio -lm -lparam -lITKBasicFilters -lITKCommon
>> >-lVXLNumerics
>> > > -lITKIO
>> > >
>> 
>-Wl,-R,/Development/ITK/Insight/Examples/StreamedWatershedSegmentation/Paramete
>> r
>> > > FileParser  -o itkAntiAliasBinaryImageFilterExample
>> > > c++: /Code/Common: No such file or directory
>> > > c++: /Code/BasicFilters: No such file or directory
>> > > c++: /Code/Algorithms: No such file or directory
>> > > c++: /Code/Common: No such file or directory
>> > > c++: /Code/IO: No such file or directory
>> > > c++: /Examples/StreamedWatershedSegmentation/ParameterFileParser: No
>> >such file
>> > > or directory
>> > > *** Error code 1
>> > > The following command caused the error:
>> > > c++  -g -O2 itkAntiAliasBinaryImageFilterExample.o /Code/Common
>> > > /Code/BasicFilters /Code/Algorithms /Code/Common /Code/IO
>> > > /Examples/StreamedWatershedSegmentation/ParameterFileParser
>> > >
>> 
>-L/Development/ITK/Insight/Examples/StreamedWatershedSegmentation/ParameterFile
>> P
>> > > arser -lVXLNumerics -lITKCommon -lITKBasicFilters -lCio -lm -lparam
>> > > -lITKBasicFilters -lITKCommon -lVXLNumerics -lITKIO -lVXLNumerics
>> >-lITKCommon
>> > > -lITKBasicFilters -lCio -lm -lparam -lITKBasicFilters -lITKCommon
>> >-lVXLNumerics
>> > > -lITKIO
>> > >
>> 
>-Wl,-R,/Development/ITK/Insight/Examples/StreamedWatershedSegmentation/Paramete
>> r
>> > > FileParser  -o itkAntiAliasBinaryImageFilterExample
>> > > make: Fatal error: Command failed for target
>> > > `itkAntiAliasBinaryImageFilterExample'
>> > > Current working directory
>> > > /Development/ITK/Insight/Examples/AntiAliasBinaryImageFilter
>> > > *** Error code 1
>> > > The following command caused the error:
>> > > make -  all
>> > > make: Fatal error: Command failed for target `default_target'
>> > > Current working directory
>> > > /Development/ITK/Insight/Examples/AntiAliasBinaryImageFilter
>> > > *** Error code 1
>> > > The following command caused the error:
>> > > cd /Development/ITK/Insight/Examples/AntiAliasBinaryImageFilter; make -
>> > > default_target
>> > > make: Fatal error: Command failed for target
>> > > `default_target_AntiAliasBinaryImageFilter'
>> > > Current working directory /Development/ITK/Insight/Examples
>> > > *** Error code 1
>> > > The following command caused the error:
>> > > make -  all
>> > > make: Fatal error: Command failed for target `default_target'
>> > > -------
>> > >
>> > > Did I miss something?
>> > >
>> > > Thanks,
>> > >
>> > > Linglan
>> > > ============================
>> > > Linglan Edwards, Ph.D.
>> > > Senior Software Engineer
>> > > National Library of Medicine
>> > > Phone: (301) 435-3147
>> > > Email: linglan@nlm.nih.gov
>> > >
>> > > _______________________________________________
>> > > Insight-users mailing list
>> > > Insight-users@public.kitware.com
>> > > http://public.kitware.com/mailman/listinfo/insight-users
>> > >
>> > >
>> >
>> >
>> >
>> >
>> >
>> >
>>
>> ============================
>> Linglan Edwards, Ph.D.
>> Senior Software Engineer
>> National Library of Medicine
>> Phone: (301) 435-3147
>> Email: linglan@nlm.nih.gov
>>
>> _______________________________________________
>> Insight-users mailing list
>> Insight-users@public.kitware.com
>> http://public.kitware.com/mailman/listinfo/insight-users
>
>--
>Malaterre, Mathieu
>The John P. Robarts Research Institute
>Imaging Research Laboratories
>http://www.imaging.robarts.ca/~mmalat
>
>
>
>

============================
Linglan Edwards, Ph.D.
Senior Software Engineer
National Library of Medicine
Phone: (301) 435-3147
Email: linglan@nlm.nih.gov