[Insight-users] Re: WrapITK binaries

[Michael Bell]

Gaetan,

This works great on Linux. I can move the libs around all I want now.
I just take the bin directory from ITK, the lib directory from
wrapITK, and InsightToolkit.jar.

I'm compiling on Windows now. I'll let you know the results.

thanks,
michael

On 8/15/06, Gaëtan Lehmann <gaetan.lehmann at jouy.inra.fr> wrote:
>
> Hi,
>
> I have pushed a patch to WrapITK repository to search libs in standard
> system's paths if the libs are not found in build or install dir. I was
> giving a full name (with lib prefix and .so suffix) to the loadLibrary()
> method, while it require the lib name  without prefix or suffix.
> http://voxel/darcsweb/darcsweb.cgi?r=WrapITK;a=filediff;h=20060815220327-2fc9d-1faff0e8575fd39dab49036955d77cda1b9b9f7c.gz;f=Java/itkbase.java.in
>
> Please test and report any problem !
>
> Gaetan
>
> Le Mon, 14 Aug 2006 22:31:33 +0200, Michael Bell <michael.bell at acm.org> a
> écrit:
>
> > Gaetan,
> >
> > I understand why you would load from an absolute path based on the jar
> > file; it is very convenient for the developer. However, the path has
> > to be set to point to the ITK libs already, correct? So loadLibrary
> > appears to be appropriate, and I think it will be the solution for my
> > purposes.
> >
> > As always, I appreciate your uncommon responsiveness.
> >
> > thanks,
> > michael
> >
> >
> > On 8/14/06, Gaëtan Lehmann <gaetan.lehmann at jouy.inra.fr> wrote:
> >>
> >> Hi Michael,
> >>
> >> You're right, java use absolute paths (and tcl do the same BTW). Only
> >> python is currently able to be installed anywhere without problem -
> >> that's
> >> what I have tested. I'm not sure what is the best way to handle that
> >> problem. In python, we are using the magic __file__ variable to find the
> >> path where WrapITK is installed. Perhaps there is the same kind of thing
> >> for tcl, but I would be surprised to have the same in java.
> >> Perhaps can we use standard environment variable to found the libs if
> >> they
> >> are not installed in the default places ? In Java for example, instead
> >> of
> >> loading the libs in a particular path, we could delegate the job of
> >> finding the path of the library to some standard methods, by using
> >> Runtime.loadLibrary() instead of Runtime.load(). That way, loadLibrary()
> >> will find the lib if they are in the LD_LIBRARY_PATH on linux, in the
> >> PATH
> >> on windows, in the DYLD_LIBRARY_PATH on mac os x, ...
> >> The user only have to take care to set correctly the PATH. Would it be
> >> ok
> >> for you ?
> >>
> >> Gaetan
> >>
> >>
> >> Le Mon, 14 Aug 2006 17:28:16 +0200, Michael Bell <michael.bell at acm.org>
> >> a
> >> écrit:
> >>
> >> > How does CPack handle directory load paths?
> >> >
> >> > For java wrapping, the dll SwigRuntimeJava is loaded from an absolute
> >> > path, the path to the build directory or install path. See
> >> > WrapITK/Java/itkbase.java.in.
> >> >
> >> > If I want to distribute this to other machines without compiling from
> >> > scratch, this means that I can't put SwigRuntimeJava in the classpath
> >> > and expect it to work. I can't even preload it because it always gets
> >> > loaded with InsightToolkit.jar.
> >> >
> >> > Does itkbase need to be changed for this to work, or does CPack take
> >> > care of the problem? (BTW, this causes problems on unix and windows)
> >> >
> >> > thanks,
> >> > michael
> >> >
> >> >
> >> > On 8/10/06, Gaetan Lehmann <gaetan.lehmann at jouy.inra.fr> wrote:
> >> >>
> >> >> Hi,
> >> >>
> >> >> I have added a basic CPack configuration to WrapITK.
> >> >> It work just fine with linux, but I would not be surprised to have
> >> some
> >> >> problems on other systems (like windows).
> >> >> Can you tests on your system(s) ?
> >> >>
> >> >> The only thing to do is to set INSTALL_WRAP_ITK_COMPATIBILITY to OFF
> >> >> with
> >> >> cmake, and to build the target "package". On my system:
> >> >>
> >> >> [glehmann at marvin build]$ make package
> >> >> Run CPack packaging tool...
> >> >> CPack: Install projects
> >> >> CPack: - Run preinstall target for: WrapITK
> >> >> CPack: - Install project: WrapITK
> >> >> CPack: Compress package
> >> >> CPack: Finalize package
> >> >> CPack: Package
> >> >>
> >> /home/glehmann/src/contrib-itk/WrapITK-unstable/build/WrapITK-0.2.1-Linux.sh
> >> >> generated.
> >> >>
> >> >> So easy :-)
> >> >>
> >> >> Gaetan
> >> >>
> >> >>
> >> >>
> >> >> On Wed, 09 Aug 2006 23:00:00 +0200, Charl P. Botha
> >> <cpbotha at gmail.com>
> >> >> wrote:
> >> >>
> >> >> > On 8/9/06, Gaëtan Lehmann <gaetan.lehmann at jouy.inra.fr> wrote:
> >> >> >> We have already talked about that some time ago with Charl.
> >> >> >> Charl, I think you have already deployed WrapITK on several host.
> >> >> Have
> >> >> >> you
> >> >> >> used a special method to do that ?
> >> >> >
> >> >> > For this application I use PyInstaller, but WrapITK was too complex
> >> >> > for it.  In the end I just made a script that collects all the
> >> >> > relevant ITK/WrapITK DLLs and Python files and puts them in the
> >> right
> >> >> > places, on Windows and Linux.  I ship this whole tree with my
> >> >> > application.  The script is now integrated in my Frankensteinian
> >> >> > build-system and it seems to work.
> >> >> >
> >> >> > You're welcome to have the bits that do the WrapITK 'packaging', of
> >> >> > course.  In principle, one should be able to take the generated
> >> tree
> >> >> > and plonk it down on a user's system.  After having set the
> >> >> > environment with a brilliant tool such as <plug>
> >> >> > cpbotha.net/Software/envedit </plug> you're good to go.
> >> >> >
> >> >> > See you,
> >> >> > Charl
> >> >>
> >> >>
> >> >>
> >> >> --
> >> >> Gaëtan Lehmann
> >> >> Biologie du Développement et de la Reproduction
> >> >> INRA de Jouy-en-Josas (France)
> >> >> tel: +33 1 34 65 29 66    fax: 01 34 65 29 09
> >> >> http://voxel.jouy.inra.fr
> >> >>
> >> >
> >> >
> >>
> >>
> >>
> >> --
> >> Gaëtan Lehmann
> >> Biologie du Développement et de la Reproduction
> >> INRA de Jouy-en-Josas (France)
> >> tel: +33 1 34 65 29 66    fax: 01 34 65 29 09
> >> http://voxel.jouy.inra.fr
> >>
> >
> >
>
>
>
> --
> Gaëtan Lehmann
> Biologie du Développement et de la Reproduction
> INRA de Jouy-en-Josas (France)
> tel: +33 1 34 65 29 66    fax: 01 34 65 29 09
> http://voxel.jouy.inra.fr
>


-- 
michael.bell at acm.org